Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27738.t1 | XP_024628620.1 | 80.4 | 271 | 25 | 2 | 1 | 252 | 1 | 262 | 1.30E-111 | 413.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27738.t1 | Q9FHE1 | 33.6 | 211 | 100 | 8 | 43 | 221 | 259 | 461 | 1.8e-16 | 88.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27738.t1 | G7JIQ3 | 76.8 | 271 | 35 | 2 | 1 | 252 | 1 | 262 | 9.6e-104 | 386.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene27738 | MS.gene97346 | PPI |
| MS.gene27738 | MS.gene029093 | PPI |
| MS.gene27738 | MS.gene066439 | PPI |
| MS.gene27738 | MS.gene90825 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27738.t1 | MTR_4g083510 | 76.753 | 271 | 35 | 2 | 1 | 252 | 1 | 262 | 6.74e-134 | 387 |
| MS.gene27738.t1 | MTR_7g077380 | 96.296 | 162 | 3 | 1 | 259 | 417 | 2 | 163 | 6.33e-111 | 323 |
| MS.gene27738.t1 | MTR_0867s0010 | 67.159 | 271 | 60 | 3 | 1 | 252 | 1 | 261 | 3.51e-106 | 317 |
| MS.gene27738.t1 | MTR_4g063670 | 62.731 | 271 | 72 | 3 | 1 | 252 | 1 | 261 | 7.11e-102 | 305 |
| MS.gene27738.t1 | MTR_1g051185 | 54.613 | 271 | 69 | 4 | 1 | 252 | 1 | 236 | 3.46e-79 | 246 |
| MS.gene27738.t1 | MTR_3g069460 | 52.459 | 183 | 59 | 2 | 1 | 164 | 1 | 174 | 1.41e-54 | 179 |
| MS.gene27738.t1 | MTR_8g015750 | 60.432 | 139 | 38 | 2 | 114 | 252 | 7 | 128 | 3.26e-38 | 137 |
| MS.gene27738.t1 | MTR_7g088160 | 40.708 | 226 | 98 | 7 | 20 | 222 | 75 | 287 | 9.66e-35 | 133 |
| MS.gene27738.t1 | MTR_8g015740 | 70.115 | 87 | 17 | 1 | 5 | 91 | 53 | 130 | 2.68e-31 | 116 |
| MS.gene27738.t1 | MTR_2g023560 | 79.032 | 62 | 13 | 0 | 55 | 116 | 57 | 118 | 2.44e-27 | 105 |
| MS.gene27738.t1 | MTR_7g107340 | 41.722 | 151 | 63 | 6 | 78 | 205 | 98 | 246 | 2.39e-23 | 100 |
| MS.gene27738.t1 | MTR_6g081150 | 37.956 | 137 | 62 | 5 | 79 | 213 | 40 | 155 | 6.50e-17 | 78.6 |
| MS.gene27738.t1 | MTR_5g044920 | 77.083 | 48 | 2 | 1 | 44 | 91 | 18 | 56 | 3.73e-15 | 71.2 |
| MS.gene27738.t1 | MTR_7g114170 | 32.967 | 182 | 59 | 7 | 18 | 181 | 61 | 197 | 2.43e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27738.t1 | AT1G01730 | 36.628 | 172 | 77 | 5 | 266 | 412 | 43 | 207 | 1.17e-23 | 99.0 |
| MS.gene27738.t1 | AT5G41220 | 34.123 | 211 | 99 | 8 | 43 | 221 | 209 | 411 | 4.64e-21 | 95.9 |
| MS.gene27738.t1 | AT5G41220 | 34.123 | 211 | 99 | 8 | 43 | 221 | 201 | 403 | 4.65e-21 | 95.9 |
| MS.gene27738.t1 | AT5G41220 | 35.071 | 211 | 97 | 9 | 43 | 221 | 259 | 461 | 4.93e-21 | 95.9 |
| MS.gene27738.t1 | AT5G41240 | 32.212 | 208 | 107 | 8 | 36 | 213 | 252 | 455 | 3.73e-18 | 87.0 |
| MS.gene27738.t1 | AT3G47680 | 31.122 | 196 | 104 | 7 | 30 | 204 | 23 | 208 | 2.33e-14 | 73.9 |
| MS.gene27738.t1 | AT1G66235 | 25.907 | 193 | 109 | 7 | 61 | 219 | 7 | 199 | 7.65e-12 | 66.2 |
Find 80 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCTCTTGATCATTTAAT+TGG | 0.210422 | 7.2:+28556384 | None:intergenic |
| ATCTTTCAAAGCATCAAATT+TGG | 0.262300 | 7.2:+28555698 | None:intergenic |
| CTTTGATCATTCCCAACAAT+TGG | 0.310977 | 7.2:+28556182 | None:intergenic |
| TTCAGCTTCTGGAGCATATT+CGG | 0.312536 | 7.2:-28555832 | MS.gene27738:CDS |
| GCCATGGATTCTGTCTATTA+TGG | 0.320336 | 7.2:-28551769 | MS.gene27738:CDS |
| TAGTATTTACCTGGATGAAC+TGG | 0.329480 | 7.2:+28554734 | None:intergenic |
| GATGTAATTGGAAGTGGAAT+TGG | 0.337846 | 7.2:+28554789 | None:intergenic |
| AGAACAAAGAATTCAGCTTC+TGG | 0.340604 | 7.2:-28555843 | MS.gene27738:CDS |
| GCTACAGGTACGTGTGCTTT+TGG | 0.349089 | 7.2:+28554868 | None:intergenic |
| GATGAATCAAAATGGCTTGC+AGG | 0.369115 | 7.2:-28555891 | MS.gene27738:CDS |
| TATTGAGAGATGAATCAAAA+TGG | 0.369623 | 7.2:-28555899 | MS.gene27738:CDS |
| AGATTCGAATGGTCTCTTCT+TGG | 0.375812 | 7.2:+28554816 | None:intergenic |
| AATGGTCTCTTCTTGGTTGA+AGG | 0.380210 | 7.2:+28554823 | None:intergenic |
| AGAAAACCAGAGGCACTTAA+AGG | 0.388476 | 7.2:-28556092 | MS.gene27738:intron |
| GGTGGATTGTATTCACTTGT+TGG | 0.390206 | 7.2:+28555789 | None:intergenic |
| GTTGTTGGAGGATCAGCTTT+TGG | 0.392048 | 7.2:-28551814 | MS.gene27738:CDS |
| CATCAACCTTTAAGTGCCTC+TGG | 0.393963 | 7.2:+28556086 | None:intergenic |
| ATTTCAAAGGATCCAATTGT+TGG | 0.399370 | 7.2:-28556194 | MS.gene27738:CDS |
| GAAGTTCATATGAATAATAA+TGG | 0.400120 | 7.2:-28556410 | MS.gene27738:CDS |
| ATGAGAAGTTCATCCTCCTT+TGG | 0.406782 | 7.2:+28556233 | None:intergenic |
| CTTACTGTCTCGAATTTCAA+TGG | 0.415130 | 7.2:+28552290 | None:intergenic |
| CTCCGAGAGTAACAACATTT+CGG | 0.416214 | 7.2:-28555985 | MS.gene27738:CDS |
| GGCTTGGAAACAATTAATCT+TGG | 0.423881 | 7.2:-28556335 | MS.gene27738:CDS |
| GTCTGCCTGTCTTCCACCAC+AGG | 0.431342 | 7.2:+28551850 | None:intergenic |
| TATTCACTTGTTGGTGTTGG+TGG | 0.444501 | 7.2:+28555798 | None:intergenic |
| GCCTCCACGTTTCAAGTCTC+CGG | 0.447122 | 7.2:-28551908 | MS.gene27738:CDS |
| TTTCAAAGGATCCAATTGTT+GGG | 0.450141 | 7.2:-28556193 | MS.gene27738:CDS |
| TGAATTGTTCACGTACATCT+TGG | 0.455511 | 7.2:+28555943 | None:intergenic |
| GAAGGGAAAAGAAAAGGTTA+TGG | 0.462232 | 7.2:-28555733 | MS.gene27738:CDS |
| TGAGTTGCGGCAGGAGCTAC+AGG | 0.465534 | 7.2:+28554853 | None:intergenic |
| ATGGCTTGCAGGTTGTGTAT+TGG | 0.465781 | 7.2:-28555880 | MS.gene27738:CDS |
| TTCTCTACTTGAGTTTGCTC+CGG | 0.475424 | 7.2:+28551889 | None:intergenic |
| TTGTATTCACTTGTTGGTGT+TGG | 0.477883 | 7.2:+28555795 | None:intergenic |
| CCACAACTTTGCACTCAAGA+TGG | 0.481610 | 7.2:-28556356 | MS.gene27738:CDS |
| ACAACGTCCAATCGGTCAAA+AGG | 0.486049 | 7.2:-28555766 | MS.gene27738:CDS |
| GTAGGACGAAGGAACAATTT+CGG | 0.487534 | 7.2:-28551747 | MS.gene27738:CDS |
| TCGGTCAAAAGGCGGCAAAA+AGG | 0.487566 | 7.2:-28555755 | MS.gene27738:CDS |
| ACTTTGCACTCAAGATGGCT+TGG | 0.490583 | 7.2:-28556351 | MS.gene27738:CDS |
| AGCCGAAATGTTGTTACTCT+CGG | 0.490585 | 7.2:+28555983 | None:intergenic |
| ATGAACTTCTCATTCAATCA+TGG | 0.496152 | 7.2:-28556223 | MS.gene27738:CDS |
| GACCACCTGTGGTGGAAGAC+AGG | 0.503609 | 7.2:-28551855 | MS.gene27738:CDS |
| CTTGAAAATTCTTGTCGCGA+TGG | 0.504105 | 7.2:+28556117 | None:intergenic |
| ACACTGGGGACACATGTTGT+TGG | 0.509120 | 7.2:-28551829 | MS.gene27738:CDS |
| ATTCACTTGTTGGTGTTGGT+GGG | 0.524603 | 7.2:+28555799 | None:intergenic |
| GGAGTTTGTTGAGTTGCGGC+AGG | 0.525404 | 7.2:+28554844 | None:intergenic |
| CATGGCACCAAAGGATTACT+CGG | 0.529051 | 7.2:+28551711 | None:intergenic |
| ACGAAGGAACAATTTCGGTC+AGG | 0.534706 | 7.2:-28551742 | MS.gene27738:CDS |
| AATCCACCACAACGTCCAAT+CGG | 0.536837 | 7.2:-28555774 | MS.gene27738:CDS |
| CCTTCGTCCCCAGTTCATCC+AGG | 0.541342 | 7.2:-28554743 | MS.gene27738:intron |
| AATTCACACTTGAGAATGCA+TGG | 0.543169 | 7.2:-28555926 | MS.gene27738:CDS |
| GGTGGAAGACAGGCAGACAC+TGG | 0.544851 | 7.2:-28551845 | MS.gene27738:CDS |
| ATCATGGCTCAATATTTCAA+AGG | 0.547059 | 7.2:-28556207 | MS.gene27738:CDS |
| AGTATTTACCTGGATGAACT+GGG | 0.560030 | 7.2:+28554735 | None:intergenic |
| TAATAGACAGAATCCATGGC+TGG | 0.561210 | 7.2:+28551772 | None:intergenic |
| AATGGAGATAGACAGAAAGA+AGG | 0.562198 | 7.2:-28555606 | MS.gene27738:intron |
| ATTAATCTTGGTGAAGAAGT+CGG | 0.569606 | 7.2:-28556323 | MS.gene27738:CDS |
| GTGGAAGACAGGCAGACACT+GGG | 0.571904 | 7.2:-28551844 | MS.gene27738:CDS |
| CTGGGGACACATGTTGTTGG+AGG | 0.576160 | 7.2:-28551826 | MS.gene27738:CDS |
| TGAAGGAGTTTGTTGAGTTG+CGG | 0.591629 | 7.2:+28554840 | None:intergenic |
| ACCATAATAGACAGAATCCA+TGG | 0.593761 | 7.2:+28551768 | None:intergenic |
| GTTGTCGCTCTAAAGAAAAG+TGG | 0.594037 | 7.2:-28556011 | MS.gene27738:CDS |
| TGGATTCTGTCTATTATGGT+AGG | 0.595747 | 7.2:-28551765 | MS.gene27738:CDS |
| CATATGAACTTCATGAGACA+TGG | 0.595749 | 7.2:+28556421 | None:intergenic |
| TGAAGAAGTCGGAGCTACAT+TGG | 0.597632 | 7.2:-28556312 | MS.gene27738:CDS |
| AATAAGATTTAAACCAAAGG+AGG | 0.598325 | 7.2:-28556246 | MS.gene27738:CDS |
| TGCCTGTCTTCCACCACAGG+TGG | 0.604374 | 7.2:+28551853 | None:intergenic |
| TGACCGATTGGACGTTGTGG+TGG | 0.605293 | 7.2:+28555771 | None:intergenic |
| CCTGGATGAACTGGGGACGA+AGG | 0.636286 | 7.2:+28554743 | None:intergenic |
| GAAAATAAGATTTAAACCAA+AGG | 0.637971 | 7.2:-28556249 | MS.gene27738:CDS |
| CCATCTTGAGTGCAAAGTTG+TGG | 0.650606 | 7.2:+28556356 | None:intergenic |
| TCCGGAGACTTGAAACGTGG+AGG | 0.658065 | 7.2:+28551907 | None:intergenic |
| ACGTCCAATCGGTCAAAAGG+CGG | 0.661921 | 7.2:-28555763 | MS.gene27738:CDS |
| CGAAATGTTGTTACTCTCGG+AGG | 0.671323 | 7.2:+28555986 | None:intergenic |
| ATTGTTGGGAATGATCAAAG+AGG | 0.674803 | 7.2:-28556179 | MS.gene27738:CDS |
| TGCTCCGGAGACTTGAAACG+TGG | 0.675943 | 7.2:+28551904 | None:intergenic |
| GAAGGTCACGAACTAGAGCA+CGG | 0.700506 | 7.2:+28554761 | None:intergenic |
| TGTCTATTATGGTAGGACGA+AGG | 0.707699 | 7.2:-28551758 | MS.gene27738:CDS |
| GAATTGGAATCAGATTCGAA+TGG | 0.715628 | 7.2:+28554805 | None:intergenic |
| GTATTTACCTGGATGAACTG+GGG | 0.726694 | 7.2:+28554736 | None:intergenic |
| TGGAAGACAGGCAGACACTG+GGG | 0.732637 | 7.2:-28551843 | MS.gene27738:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAGAAAATATAATTAAG+TGG | - | chr7.2:28553087-28553106 | MS.gene27738:intron | 10.0% |
| !! | TAACAAAAAATATAATATAG+TGG | - | chr7.2:28552843-28552862 | MS.gene27738:intron | 10.0% |
| !!! | GATTTAATTATTATGTATTT+TGG | - | chr7.2:28552768-28552787 | MS.gene27738:intron | 10.0% |
| !!! | TAAATTATTGAATTTTTCAT+CGG | + | chr7.2:28555170-28555189 | None:intergenic | 10.0% |
| !!! | TCTTGTTTTTATTTTATTTT+GGG | - | chr7.2:28554127-28554146 | MS.gene27738:intron | 10.0% |
| !!! | TTCATTTTTAATTTCTAAAT+AGG | - | chr7.2:28555003-28555022 | MS.gene27738:intron | 10.0% |
| !! | ATATCATAATTTCCTTAAAT+TGG | + | chr7.2:28554101-28554120 | None:intergenic | 15.0% |
| !! | ATATTATTATATATGTTCGT+TGG | - | chr7.2:28552746-28552765 | MS.gene27738:intron | 15.0% |
| !! | ATTCTATGAATTAAGATAAA+GGG | + | chr7.2:28555739-28555758 | None:intergenic | 15.0% |
| !! | TAAAATCAATATGTGAATAA+CGG | + | chr7.2:28552876-28552895 | None:intergenic | 15.0% |
| !! | TAATCAAATATAATACTTTC+AGG | + | chr7.2:28554969-28554988 | None:intergenic | 15.0% |
| !! | TATATTAACAAATTTCTACA+TGG | + | chr7.2:28555341-28555360 | None:intergenic | 15.0% |
| !! | TGAATTATGATATGATAATT+TGG | + | chr7.2:28555885-28555904 | None:intergenic | 15.0% |
| !! | TTTCTCTTGAAATATTAATA+TGG | - | chr7.2:28553472-28553491 | MS.gene27738:intron | 15.0% |
| !!! | ACTTTTACAAAATTTACAAT+GGG | + | chr7.2:28553058-28553077 | None:intergenic | 15.0% |
| !!! | CATTTTTGAATTTAAATTGA+GGG | - | chr7.2:28553599-28553618 | MS.gene27738:intron | 15.0% |
| !!! | GTCTTGTTTTTATTTTATTT+TGG | - | chr7.2:28554126-28554145 | MS.gene27738:intron | 15.0% |
| !!! | TACTTTTACAAAATTTACAA+TGG | + | chr7.2:28553059-28553078 | None:intergenic | 15.0% |
| !!! | TCATTTTTGAATTTAAATTG+AGG | - | chr7.2:28553598-28553617 | MS.gene27738:intron | 15.0% |
| !!! | TTGTTATGTTTTTCAAATTT+CGG | - | chr7.2:28553839-28553858 | MS.gene27738:intron | 15.0% |
| !!! | TTTTAATAAAATTTCTCTCT+AGG | - | chr7.2:28554199-28554218 | MS.gene27738:intron | 15.0% |
| !! | AAAAACATAACAATCTTACT+AGG | + | chr7.2:28553832-28553851 | None:intergenic | 20.0% |
| !! | AGAATATATTGTAAGATTAG+TGG | - | chr7.2:28553030-28553049 | MS.gene27738:intron | 20.0% |
| !! | ATCATTGATGAAGAAAATAA+AGG | + | chr7.2:28555250-28555269 | None:intergenic | 20.0% |
| !! | ATCTTATATCTTGAATTTAC+TGG | - | chr7.2:28553863-28553882 | MS.gene27738:intron | 20.0% |
| !! | ATTTCTTATACTTTCTGATT+GGG | - | chr7.2:28556074-28556093 | MS.gene27738:intron | 20.0% |
| !! | CATTCTATGAATTAAGATAA+AGG | + | chr7.2:28555740-28555759 | None:intergenic | 20.0% |
| !! | CTTTATCTTAATTCATAGAA+TGG | - | chr7.2:28555738-28555757 | MS.gene27738:CDS | 20.0% |
| !! | GAAAATAAGATTTAAACCAA+AGG | - | chr7.2:28551896-28551915 | MS.gene27738:CDS | 20.0% |
| !! | GAAGTTCATATGAATAATAA+TGG | - | chr7.2:28551735-28551754 | MS.gene27738:CDS | 20.0% |
| !! | GAGATAAAACAGAAATAATT+AGG | + | chr7.2:28555794-28555813 | None:intergenic | 20.0% |
| !! | GGAAATGATTAAAAAAATGA+GGG | - | chr7.2:28554034-28554053 | MS.gene27738:intron | 20.0% |
| !! | TCATTGATGAAGAAAATAAA+GGG | + | chr7.2:28555249-28555268 | None:intergenic | 20.0% |
| !! | TCTTAAAATGAAGTAAGAAA+CGG | - | chr7.2:28554717-28554736 | MS.gene27738:intron | 20.0% |
| !! | TCTTATATCTTGAATTTACT+GGG | - | chr7.2:28553864-28553883 | MS.gene27738:intron | 20.0% |
| !!! | AAATTTTTGTAGAAAAACCA+CGG | + | chr7.2:28555428-28555447 | None:intergenic | 20.0% |
| !!! | GTGTAAATTCAATTTTTTTC+AGG | + | chr7.2:28553555-28553574 | None:intergenic | 20.0% |
| !!! | GTTTTCAATAATATGTAGTT+AGG | - | chr7.2:28553773-28553792 | MS.gene27738:intron | 20.0% |
| !!! | TAAGATTTTGAGAAGATTTA+TGG | + | chr7.2:28553450-28553469 | None:intergenic | 20.0% |
| !!! | TGTTTTTATTTTATTTTGGG+TGG | - | chr7.2:28554130-28554149 | MS.gene27738:intron | 20.0% |
| !!! | TTAAACGATGTTTATTTTTG+TGG | - | chr7.2:28556102-28556121 | MS.gene27738:CDS | 20.0% |
| ! | AAAGCAAAAGGGATTTATAT+TGG | + | chr7.2:28555070-28555089 | None:intergenic | 25.0% |
| ! | AACAAATACTCAATGCATAA+TGG | + | chr7.2:28555553-28555572 | None:intergenic | 25.0% |
| ! | AACAGAAATAATTAGGAACT+TGG | + | chr7.2:28555787-28555806 | None:intergenic | 25.0% |
| ! | AACCAATAAGTAAAGCAAAA+GGG | + | chr7.2:28555081-28555100 | None:intergenic | 25.0% |
| ! | AACCTAAAAATGAGTACTAT+GGG | - | chr7.2:28554253-28554272 | MS.gene27738:intron | 25.0% |
| ! | AATAAGATTTAAACCAAAGG+AGG | - | chr7.2:28551899-28551918 | MS.gene27738:CDS | 25.0% |
| ! | AATAATATGTAGTTAGGACA+AGG | - | chr7.2:28553779-28553798 | MS.gene27738:intron | 25.0% |
| ! | AATATGTATTGAACTATCGA+AGG | - | chr7.2:28555676-28555695 | MS.gene27738:CDS | 25.0% |
| ! | AGGTATTAGTAAAACATAAC+TGG | + | chr7.2:28554822-28554841 | None:intergenic | 25.0% |
| ! | AGTATAAGAAATCTTAGACA+TGG | + | chr7.2:28556066-28556085 | None:intergenic | 25.0% |
| ! | ATATGAATAACACACTACTA+TGG | + | chr7.2:28553689-28553708 | None:intergenic | 25.0% |
| ! | ATTGAATTTACACTCTTGTT+AGG | - | chr7.2:28553562-28553581 | MS.gene27738:intron | 25.0% |
| ! | ATTTAAATTGAGGGTTGAAT+TGG | - | chr7.2:28553608-28553627 | MS.gene27738:intron | 25.0% |
| ! | CAATCTCTTGATCATTTAAT+TGG | + | chr7.2:28551764-28551783 | None:intergenic | 25.0% |
| ! | GAAAAAAAGATTTCAACCAA+AGG | - | chr7.2:28551869-28551888 | MS.gene27738:CDS | 25.0% |
| ! | GATTTCTTATACTTTCTGAT+TGG | - | chr7.2:28556073-28556092 | MS.gene27738:intron | 25.0% |
| ! | GGGAAATGATTAAAAAAATG+AGG | - | chr7.2:28554033-28554052 | MS.gene27738:intron | 25.0% |
| ! | TAACCTAAAAATGAGTACTA+TGG | - | chr7.2:28554252-28554271 | MS.gene27738:intron | 25.0% |
| ! | TATAATCAAATCCCTAACAT+TGG | + | chr7.2:28553733-28553752 | None:intergenic | 25.0% |
| ! | TATACAAATTCTCACAAAGA+AGG | + | chr7.2:28555046-28555065 | None:intergenic | 25.0% |
| ! | TATTGAGAGATGAATCAAAA+TGG | - | chr7.2:28552246-28552265 | MS.gene27738:intron | 25.0% |
| ! | TGAGAAGATTTATGGAAAAT+GGG | + | chr7.2:28553442-28553461 | None:intergenic | 25.0% |
| ! | TGATTTAGAAATACTCACAA+AGG | - | chr7.2:28552613-28552632 | MS.gene27738:intron | 25.0% |
| ! | TTCAAAGAAAACATGTTCAT+AGG | + | chr7.2:28555647-28555666 | None:intergenic | 25.0% |
| ! | TTGAATTTACACTCTTGTTA+GGG | - | chr7.2:28553563-28553582 | MS.gene27738:intron | 25.0% |
| ! | TTGAGAAGATTTATGGAAAA+TGG | + | chr7.2:28553443-28553462 | None:intergenic | 25.0% |
| ! | TTGTGAATGTATTAACTTCA+TGG | - | chr7.2:28553914-28553933 | MS.gene27738:intron | 25.0% |
| !! | ATCTTTCAAAGCATCAAATT+TGG | + | chr7.2:28552450-28552469 | None:intergenic | 25.0% |
| !! | CAAGATTATGAATTTTTGTG+TGG | - | chr7.2:28552665-28552684 | MS.gene27738:intron | 25.0% |
| !! | CATCTATTTCAAAGTTTGTT+GGG | - | chr7.2:28552099-28552118 | MS.gene27738:intron | 25.0% |
| !! | GAAATTTGAGTAAGTTTGTT+AGG | - | chr7.2:28555367-28555386 | MS.gene27738:intron | 25.0% |
| !! | GATAAAGGATCAAATTTTCA+AGG | - | chr7.2:28555389-28555408 | MS.gene27738:intron | 25.0% |
| !! | GTTTTTCTACAAAAATTTGC+TGG | - | chr7.2:28555430-28555449 | MS.gene27738:intron | 25.0% |
| !! | TATTAGCTTCATAAGGAATT+GGG | - | chr7.2:28553991-28554010 | MS.gene27738:intron | 25.0% |
| !! | TGTTCTATCGTTTTATGTAT+CGG | - | chr7.2:28553889-28553908 | MS.gene27738:intron | 25.0% |
| !! | TTATTAGCTTCATAAGGAAT+TGG | - | chr7.2:28553990-28554009 | MS.gene27738:intron | 25.0% |
| !! | TTGAAGATTTCGAATCTTTT+AGG | + | chr7.2:28554518-28554537 | None:intergenic | 25.0% |
| !!! | CATATCAAGTTTTATGTATG+TGG | - | chr7.2:28553704-28553723 | MS.gene27738:intron | 25.0% |
| !!! | TTATTTCTGTTTTATCTCGA+AGG | - | chr7.2:28555796-28555815 | MS.gene27738:CDS | 25.0% |
| !!! | TTCTTGTTATTAGCTTCATA+AGG | - | chr7.2:28553984-28554003 | MS.gene27738:intron | 25.0% |
| AAAAAGATTTCAACCAAAGG+AGG | - | chr7.2:28551872-28551891 | MS.gene27738:CDS | 30.0% | |
| AAAAAGGAAGGGAAAAGAAA+AGG | - | chr7.2:28552406-28552425 | MS.gene27738:intron | 30.0% | |
| AAAATGAGGGAATTTAAGTC+AGG | - | chr7.2:28554047-28554066 | MS.gene27738:intron | 30.0% | |
| AAAATGAGTACTATGGGTAA+AGG | - | chr7.2:28554259-28554278 | MS.gene27738:intron | 30.0% | |
| AATCTAGTGACATAATGTCT+GGG | - | chr7.2:28554308-28554327 | MS.gene27738:intron | 30.0% | |
| AATGCATAATGGTACAACAA+AGG | + | chr7.2:28555542-28555561 | None:intergenic | 30.0% | |
| AGAAGATTTATGGAAAATGG+GGG | + | chr7.2:28553440-28553459 | None:intergenic | 30.0% | |
| AGGGATTTGATTATAGCTTT+AGG | - | chr7.2:28553738-28553757 | MS.gene27738:intron | 30.0% | |
| ATCATGGCTCAATATTTCAA+AGG | - | chr7.2:28551938-28551957 | MS.gene27738:CDS | 30.0% | |
| ATGAACTTCTCATTCAATCA+TGG | - | chr7.2:28551922-28551941 | MS.gene27738:CDS | 30.0% | |
| ATTAATCTTGGTGAAGAAGT+CGG | - | chr7.2:28551822-28551841 | MS.gene27738:CDS | 30.0% | |
| ATTTCAAAGGATCCAATTGT+TGG | - | chr7.2:28551951-28551970 | MS.gene27738:CDS | 30.0% | |
| CATTGTCCACTAAATATACT+TGG | - | chr7.2:28555972-28555991 | MS.gene27738:CDS | 30.0% | |
| CCATCTATTTCAAAGTTTGT+TGG | - | chr7.2:28552098-28552117 | MS.gene27738:intron | 30.0% | |
| GAACCAATAAGTAAAGCAAA+AGG | + | chr7.2:28555082-28555101 | None:intergenic | 30.0% | |
| GAGAAGATTTATGGAAAATG+GGG | + | chr7.2:28553441-28553460 | None:intergenic | 30.0% | |
| GCAAAGAGTTGAAAATGATA+GGG | - | chr7.2:28552574-28552593 | MS.gene27738:intron | 30.0% | |
| GGACAATGTGAAATATAAAC+AGG | + | chr7.2:28555960-28555979 | None:intergenic | 30.0% | |
| TAACATCACCGTTAAGAAAA+AGG | - | chr7.2:28553215-28553234 | MS.gene27738:intron | 30.0% | |
| TAATTCCTAAAGCTTGGATT+TGG | + | chr7.2:28554783-28554802 | None:intergenic | 30.0% | |
| TCAGTCAATCTGAACTATTA+GGG | + | chr7.2:28555706-28555725 | None:intergenic | 30.0% | |
| TCATAATCTTGTAGTTGTCT+TGG | + | chr7.2:28552656-28552675 | None:intergenic | 30.0% | |
| TCGAAATCTTCAAAGCAAAT+AGG | - | chr7.2:28554525-28554544 | MS.gene27738:intron | 30.0% | |
| TGCAAAGAGTTGAAAATGAT+AGG | - | chr7.2:28552573-28552592 | MS.gene27738:intron | 30.0% | |
| TTTCAAAGGATCCAATTGTT+GGG | - | chr7.2:28551952-28551971 | MS.gene27738:CDS | 30.0% | |
| ! | AATTTTTGTAGTCAGGAGTT+TGG | + | chr7.2:28555826-28555845 | None:intergenic | 30.0% |
| ! | ACTCTACTTGATGGTATAAA+TGG | + | chr7.2:28553160-28553179 | None:intergenic | 30.0% |
| ! | ATCAAAGAGGAGATAGTTTT+TGG | - | chr7.2:28551979-28551998 | MS.gene27738:intron | 30.0% |
| ! | ATCCCTTTTGCTTTACTTAT+TGG | - | chr7.2:28555076-28555095 | MS.gene27738:intron | 30.0% |
| ! | CTCTACTTGATGGTATAAAT+GGG | + | chr7.2:28553159-28553178 | None:intergenic | 30.0% |
| ! | GACGTTTACCTTTTTCTTAA+CGG | + | chr7.2:28553226-28553245 | None:intergenic | 30.0% |
| ! | TTCTTTGTTCTTTTTGCAGA+CGG | + | chr7.2:28552293-28552312 | None:intergenic | 30.0% |
| ! | TTTTCTTAACGGTGATGTTA+GGG | + | chr7.2:28553215-28553234 | None:intergenic | 30.0% |
| ! | TTTTTCTTAACGGTGATGTT+AGG | + | chr7.2:28553216-28553235 | None:intergenic | 30.0% |
| !! | AAATCCAAGCTTTAGGAATT+AGG | - | chr7.2:28554782-28554801 | MS.gene27738:CDS | 30.0% |
| !! | CCAACAAACTTTGAAATAGA+TGG | + | chr7.2:28552101-28552120 | None:intergenic | 30.0% |
| !! | CTTTACTTATTGGTTCTCTA+TGG | - | chr7.2:28555086-28555105 | MS.gene27738:intron | 30.0% |
| !! | GAGTAAGTTTGTTAGGATAA+AGG | - | chr7.2:28555374-28555393 | MS.gene27738:intron | 30.0% |
| !! | GATCAAATTTTCAAGGAGAT+GGG | - | chr7.2:28555396-28555415 | MS.gene27738:intron | 30.0% |
| !! | GATTTTGATGTAATTGGAAG+TGG | + | chr7.2:28553365-28553384 | None:intergenic | 30.0% |
| !! | TACCCATAGTACTCATTTTT+AGG | + | chr7.2:28554258-28554277 | None:intergenic | 30.0% |
| !! | TATTGGTTCTCTATGGAATT+TGG | - | chr7.2:28555093-28555112 | MS.gene27738:intron | 30.0% |
| !!! | ACGATGTTTATTTTTGTGGT+TGG | - | chr7.2:28556106-28556125 | MS.gene27738:CDS | 30.0% |
| !!! | ATGGTTGTTGTTTTCTTATC+TGG | - | chr7.2:28553491-28553510 | MS.gene27738:intron | 30.0% |
| !!! | CGTTTTGAGAGTGAAAAAAA+TGG | - | chr7.2:28552521-28552540 | MS.gene27738:intron | 30.0% |
| !!! | TAGCTTTAGGAGATTTTCAT+TGG | - | chr7.2:28553751-28553770 | MS.gene27738:intron | 30.0% |
| !!! | TTCGAATCTTTTAGGTTTTC+AGG | + | chr7.2:28554510-28554529 | None:intergenic | 30.0% |
| AAACAGGTACAATACAATGC+GGG | + | chr7.2:28554596-28554615 | None:intergenic | 35.0% | |
| AAACGGCTGAAAAAATGTTC+TGG | - | chr7.2:28554734-28554753 | MS.gene27738:intron | 35.0% | |
| AACTTCTTACTAGGTAGAGT+CGG | - | chr7.2:28554640-28554659 | MS.gene27738:intron | 35.0% | |
| AATGGAGATAGACAGAAAGA+AGG | - | chr7.2:28552539-28552558 | MS.gene27738:intron | 35.0% | |
| AATTCACACTTGAGAATGCA+TGG | - | chr7.2:28552219-28552238 | MS.gene27738:intron | 35.0% | |
| ACCATAATAGACAGAATCCA+TGG | + | chr7.2:28556380-28556399 | None:intergenic | 35.0% | |
| ACTATGGGTAAAGGAATGAT+TGG | - | chr7.2:28554268-28554287 | MS.gene27738:intron | 35.0% | |
| AGAACAAAGAATTCAGCTTC+TGG | - | chr7.2:28552302-28552321 | MS.gene27738:CDS | 35.0% | |
| AGTATTTACCTGGATGAACT+GGG | + | chr7.2:28553413-28553432 | None:intergenic | 35.0% | |
| ATCCAAACTCAACCTAACTT+AGG | + | chr7.2:28553949-28553968 | None:intergenic | 35.0% | |
| ATCTAGTGACATAATGTCTG+GGG | - | chr7.2:28554309-28554328 | MS.gene27738:intron | 35.0% | |
| ATTGTTGGGAATGATCAAAG+AGG | - | chr7.2:28551966-28551985 | MS.gene27738:CDS | 35.0% | |
| CAATCCTCTATTAGACTTGA+AGG | - | chr7.2:28554476-28554495 | MS.gene27738:intron | 35.0% | |
| CAATCTAGTGACATAATGTC+TGG | - | chr7.2:28554307-28554326 | MS.gene27738:intron | 35.0% | |
| CCAACTCCAAGTATATTTAG+TGG | + | chr7.2:28555981-28556000 | None:intergenic | 35.0% | |
| CCACTAAATATACTTGGAGT+TGG | - | chr7.2:28555978-28555997 | MS.gene27738:CDS | 35.0% | |
| CTATGGGTAAAGGAATGATT+GGG | - | chr7.2:28554269-28554288 | MS.gene27738:intron | 35.0% | |
| CTTACTGTCTCGAATTTCAA+TGG | + | chr7.2:28555858-28555877 | None:intergenic | 35.0% | |
| CTTATACTTTCTGATTGGGT+TGG | - | chr7.2:28556078-28556097 | MS.gene27738:intron | 35.0% | |
| CTTTGATCATTCCCAACAAT+TGG | + | chr7.2:28551966-28551985 | None:intergenic | 35.0% | |
| GAAAAGAATACCTCCAACTT+TGG | - | chr7.2:28554852-28554871 | MS.gene27738:CDS | 35.0% | |
| GAAACAGGTACAATACAATG+CGG | + | chr7.2:28554597-28554616 | None:intergenic | 35.0% | |
| GAAGGGAAAAGAAAAGGTTA+TGG | - | chr7.2:28552412-28552431 | MS.gene27738:intron | 35.0% | |
| GAATTGGAATCAGATTCGAA+TGG | + | chr7.2:28553343-28553362 | None:intergenic | 35.0% | |
| GATGTAATTGGAAGTGGAAT+TGG | + | chr7.2:28553359-28553378 | None:intergenic | 35.0% | |
| GGCGTGATTAGAGATAAATA+TGG | - | chr7.2:28552686-28552705 | MS.gene27738:intron | 35.0% | |
| GGCTTGGAAACAATTAATCT+TGG | - | chr7.2:28551810-28551829 | MS.gene27738:CDS | 35.0% | |
| GTATGTGGTTACCAATGTTA+GGG | - | chr7.2:28553719-28553738 | MS.gene27738:intron | 35.0% | |
| GTTGGATATGTTATACTGAC+TGG | - | chr7.2:28555996-28556015 | MS.gene27738:CDS | 35.0% | |
| GTTTCGCAAATAAGTACAAG+TGG | + | chr7.2:28555275-28555294 | None:intergenic | 35.0% | |
| TAAAGGAATGATTGGGTGAT+TGG | - | chr7.2:28554276-28554295 | MS.gene27738:intron | 35.0% | |
| TACAGAGAGGAAAACCTAAT+AGG | + | chr7.2:28554447-28554466 | None:intergenic | 35.0% | |
| TACTCCTAATTCCTAAAGCT+TGG | + | chr7.2:28554789-28554808 | None:intergenic | 35.0% | |
| TAGTATTTACCTGGATGAAC+TGG | + | chr7.2:28553414-28553433 | None:intergenic | 35.0% | |
| TAGTTAGGACAAGGATCTTT+GGG | - | chr7.2:28553788-28553807 | MS.gene27738:intron | 35.0% | |
| TGAATTGTTCACGTACATCT+TGG | + | chr7.2:28552205-28552224 | None:intergenic | 35.0% | |
| TGATAGCATAAGAGAAGGAA+TGG | + | chr7.2:28554901-28554920 | None:intergenic | 35.0% | |
| TGGATTCTGTCTATTATGGT+AGG | - | chr7.2:28556380-28556399 | MS.gene27738:CDS | 35.0% | |
| TGTATGTGGTTACCAATGTT+AGG | - | chr7.2:28553718-28553737 | MS.gene27738:intron | 35.0% | |
| TTCACCTTCAAGTCTAATAG+AGG | + | chr7.2:28554483-28554502 | None:intergenic | 35.0% | |
| TTGATTTCACCATTCATGGA+AGG | - | chr7.2:28553253-28553272 | MS.gene27738:intron | 35.0% | |
| TTTCTTAACGGTGATGTTAG+GGG | + | chr7.2:28553214-28553233 | None:intergenic | 35.0% | |
| ! | CATAAGGAATTGGGTTGTTA+TGG | - | chr7.2:28554000-28554019 | MS.gene27738:intron | 35.0% |
| ! | CTAATAGGCAATAGCGTTTT+GGG | + | chr7.2:28554432-28554451 | None:intergenic | 35.0% |
| ! | GCATTTGATTTCACCATTCA+TGG | - | chr7.2:28553249-28553268 | MS.gene27738:intron | 35.0% |
| ! | TAATAGGCAATAGCGTTTTG+GGG | + | chr7.2:28554431-28554450 | None:intergenic | 35.0% |
| ! | TATTCTTTTCAACTGTGCGA+AGG | + | chr7.2:28554842-28554861 | None:intergenic | 35.0% |
| ! | TTGTATTCACTTGTTGGTGT+TGG | + | chr7.2:28552353-28552372 | None:intergenic | 35.0% |
| !! | AGCACGGATTTTGATGTAAT+TGG | + | chr7.2:28553371-28553390 | None:intergenic | 35.0% |
| !! | ATTGCATCGATTATACAGAG+AGG | + | chr7.2:28554460-28554479 | None:intergenic | 35.0% |
| !! | CATGTTGATAGCATAAGAGA+AGG | + | chr7.2:28554906-28554925 | None:intergenic | 35.0% |
| !! | CCTTAAATTGGTTCTACTTC+CGG | + | chr7.2:28554089-28554108 | None:intergenic | 35.0% |
| !! | CTGTTTCTGTTCTACACATA+CGG | - | chr7.2:28554610-28554629 | MS.gene27738:intron | 35.0% |
| !! | GATAGTTTTTGGAAGAGGAT+TGG | - | chr7.2:28551990-28552009 | MS.gene27738:intron | 35.0% |
| !! | GGATCAAATTTTCAAGGAGA+TGG | - | chr7.2:28555395-28555414 | MS.gene27738:intron | 35.0% |
| !! | TTAGGTTGAGTTTGGATACT+TGG | - | chr7.2:28553952-28553971 | MS.gene27738:intron | 35.0% |
| !! | TTTTCAAGAGAGAAAACCAG+AGG | - | chr7.2:28552043-28552062 | MS.gene27738:intron | 35.0% |
| !!! | AATCTTATTTTCGCCTCCTT+TGG | + | chr7.2:28551888-28551907 | None:intergenic | 35.0% |
| AAAAGTCACAACACCAGACT+TGG | + | chr7.2:28555615-28555634 | None:intergenic | 40.0% | |
| AATACTTTCAGGCAACCAGA+GGG | + | chr7.2:28554958-28554977 | None:intergenic | 40.0% | |
| AATGGTCTCTTCTTGGTTGA+AGG | + | chr7.2:28553325-28553344 | None:intergenic | 40.0% | |
| ACTTCTTACTAGGTAGAGTC+GGG | - | chr7.2:28554641-28554660 | MS.gene27738:intron | 40.0% | |
| AGAATACCTCCAACTTTGGT+TGG | - | chr7.2:28554856-28554875 | MS.gene27738:CDS | 40.0% | |
| AGATTCGAATGGTCTCTTCT+TGG | + | chr7.2:28553332-28553351 | None:intergenic | 40.0% | |
| AGCCGAAATGTTGTTACTCT+CGG | + | chr7.2:28552165-28552184 | None:intergenic | 40.0% | |
| AGTTAGGACAAGGATCTTTG+GGG | - | chr7.2:28553789-28553808 | MS.gene27738:intron | 40.0% | |
| ATGAGAAGTTCATCCTCCTT+TGG | + | chr7.2:28551915-28551934 | None:intergenic | 40.0% | |
| ATGGACATGATGTCATCAAC+AGG | + | chr7.2:28556047-28556066 | None:intergenic | 40.0% | |
| CAAATTCTCACAAAGAAGGC+AGG | + | chr7.2:28555042-28555061 | None:intergenic | 40.0% | |
| CAATCCACGACTAACTACAT+AGG | + | chr7.2:28554390-28554409 | None:intergenic | 40.0% | |
| CCAAAACGCTATTGCCTATT+AGG | - | chr7.2:28554430-28554449 | MS.gene27738:intron | 40.0% | |
| CCGGAAGTAGAACCAATTTA+AGG | - | chr7.2:28554086-28554105 | MS.gene27738:intron | 40.0% | |
| CGTATGTGTAGAACAGAAAC+AGG | + | chr7.2:28554612-28554631 | None:intergenic | 40.0% | |
| CTATGTAGTTAGTCGTGGAT+TGG | - | chr7.2:28554388-28554407 | MS.gene27738:intron | 40.0% | |
| CTCCGAGAGTAACAACATTT+CGG | - | chr7.2:28552160-28552179 | MS.gene27738:intron | 40.0% | |
| CTTGAAAATTCTTGTCGCGA+TGG | + | chr7.2:28552031-28552050 | None:intergenic | 40.0% | |
| GCCATGGATTCTGTCTATTA+TGG | - | chr7.2:28556376-28556395 | MS.gene27738:CDS | 40.0% | |
| GGACTTCACAACTTCTTACT+AGG | - | chr7.2:28554631-28554650 | MS.gene27738:intron | 40.0% | |
| GTAGGACGAAGGAACAATTT+CGG | - | chr7.2:28556398-28556417 | MS.gene27738:CDS | 40.0% | |
| GTAGTTAGGACAAGGATCTT+TGG | - | chr7.2:28553787-28553806 | MS.gene27738:intron | 40.0% | |
| GTATTTACCTGGATGAACTG+GGG | + | chr7.2:28553412-28553431 | None:intergenic | 40.0% | |
| TAATACTTTCAGGCAACCAG+AGG | + | chr7.2:28554959-28554978 | None:intergenic | 40.0% | |
| TAATAGACAGAATCCATGGC+TGG | + | chr7.2:28556376-28556395 | None:intergenic | 40.0% | |
| TACATGGCATGTTCCTAAGA+AGG | + | chr7.2:28555325-28555344 | None:intergenic | 40.0% | |
| TACCATCAAGTAGAGTGACA+CGG | - | chr7.2:28553164-28553183 | MS.gene27738:intron | 40.0% | |
| TGGTTTGAGAGACCTAAGTT+AGG | - | chr7.2:28553934-28553953 | MS.gene27738:intron | 40.0% | |
| TGTCTATTATGGTAGGACGA+AGG | - | chr7.2:28556387-28556406 | MS.gene27738:CDS | 40.0% | |
| TTACGTCTCTCAGCAAAGTA+TGG | + | chr7.2:28554235-28554254 | None:intergenic | 40.0% | |
| TTAGTGTTGCCAACCAAAGT+TGG | + | chr7.2:28554868-28554887 | None:intergenic | 40.0% | |
| TTTGGATCCATAGTGTCTGA+TGG | - | chr7.2:28555111-28555130 | MS.gene27738:intron | 40.0% | |
| ! | CCTAATAGGCAATAGCGTTT+TGG | + | chr7.2:28554433-28554452 | None:intergenic | 40.0% |
| ! | GATGAATCAAAATGGCTTGC+AGG | - | chr7.2:28552254-28552273 | MS.gene27738:intron | 40.0% |
| ! | GCACTGCAATTTTTGTAGTC+AGG | + | chr7.2:28555833-28555852 | None:intergenic | 40.0% |
| ! | TCTTTTCTACGATCCAAGTC+TGG | - | chr7.2:28555599-28555618 | MS.gene27738:intron | 40.0% |
| ! | TTCTCTACTTGAGTTTGCTC+CGG | + | chr7.2:28556259-28556278 | None:intergenic | 40.0% |
| !! | AGAAAACCAGAGGCACTTAA+AGG | - | chr7.2:28552053-28552072 | MS.gene27738:intron | 40.0% |
| !! | AGTAAAGAGCATCAGCTGAA+CGG | - | chr7.2:28554552-28554571 | MS.gene27738:intron | 40.0% |
| !! | ATTCACTTGTTGGTGTTGGT+GGG | + | chr7.2:28552349-28552368 | None:intergenic | 40.0% |
| !! | GACCTAAGTTAGGTTGAGTT+TGG | - | chr7.2:28553944-28553963 | MS.gene27738:intron | 40.0% |
| !! | GAGGAGATAGTTTTTGGAAG+AGG | - | chr7.2:28551985-28552004 | MS.gene27738:intron | 40.0% |
| !! | GCATTGAGTATTTGTTGTGC+TGG | - | chr7.2:28555557-28555576 | MS.gene27738:intron | 40.0% |
| !! | GGTGGATTGTATTCACTTGT+TGG | + | chr7.2:28552359-28552378 | None:intergenic | 40.0% |
| !! | GTTGTCGCTCTAAAGAAAAG+TGG | - | chr7.2:28552134-28552153 | MS.gene27738:intron | 40.0% |
| !! | TATTCACTTGTTGGTGTTGG+TGG | + | chr7.2:28552350-28552369 | None:intergenic | 40.0% |
| !! | TGAAGGAGTTTGTTGAGTTG+CGG | + | chr7.2:28553308-28553327 | None:intergenic | 40.0% |
| !! | TTCAGCTTCTGGAGCATATT+CGG | - | chr7.2:28552313-28552332 | MS.gene27738:CDS | 40.0% |
| !! | TTTCATCACTTTTCCAGCCA+TGG | - | chr7.2:28556360-28556379 | MS.gene27738:CDS | 40.0% |
| AAACATACCCTGTGCTTTGG+AGG | - | chr7.2:28555291-28555310 | MS.gene27738:intron | 45.0% | |
| AAGAGAAGGAATGGCATACG+AGG | + | chr7.2:28554892-28554911 | None:intergenic | 45.0% | |
| AATCCACCACAACGTCCAAT+CGG | - | chr7.2:28552371-28552390 | MS.gene27738:intron | 45.0% | |
| ACAACGTCCAATCGGTCAAA+AGG | - | chr7.2:28552379-28552398 | MS.gene27738:intron | 45.0% | |
| ACGAAGGAACAATTTCGGTC+AGG | - | chr7.2:28556403-28556422 | MS.gene27738:CDS | 45.0% | |
| ACTTTGCACTCAAGATGGCT+TGG | - | chr7.2:28551794-28551813 | MS.gene27738:CDS | 45.0% | |
| ATACTTTCAGGCAACCAGAG+GGG | + | chr7.2:28554957-28554976 | None:intergenic | 45.0% | |
| ATTTCTCTCTAGGCCTTTCG+TGG | - | chr7.2:28554209-28554228 | MS.gene27738:intron | 45.0% | |
| CAAAAGGCGGCAAAAAGGAA+GGG | - | chr7.2:28552395-28552414 | MS.gene27738:intron | 45.0% | |
| CATCAACCTTTAAGTGCCTC+TGG | + | chr7.2:28552062-28552081 | None:intergenic | 45.0% | |
| CATGATGTCATCAACAGGTC+AGG | + | chr7.2:28556042-28556061 | None:intergenic | 45.0% | |
| CCAAACTCCATCAGACACTA+TGG | + | chr7.2:28555121-28555140 | None:intergenic | 45.0% | |
| CCACAACTTTGCACTCAAGA+TGG | - | chr7.2:28551789-28551808 | MS.gene27738:CDS | 45.0% | |
| CCATAGTGTCTGATGGAGTT+TGG | - | chr7.2:28555118-28555137 | MS.gene27738:intron | 45.0% | |
| CCATCTTGAGTGCAAAGTTG+TGG | + | chr7.2:28551792-28551811 | None:intergenic | 45.0% | |
| CGAAATGTTGTTACTCTCGG+AGG | + | chr7.2:28552162-28552181 | None:intergenic | 45.0% | |
| GCACACCAAATCCAAGCTTT+AGG | - | chr7.2:28554775-28554794 | MS.gene27738:CDS | 45.0% | |
| GTTAGGACAAGGATCTTTGG+GGG | - | chr7.2:28553790-28553809 | MS.gene27738:intron | 45.0% | |
| TACATAGGCTGGAAAACCTC+AGG | + | chr7.2:28554375-28554394 | None:intergenic | 45.0% | |
| TCAAAAGGCGGCAAAAAGGA+AGG | - | chr7.2:28552394-28552413 | MS.gene27738:intron | 45.0% | |
| TCATCAACAGGTCAGGAACA+TGG | + | chr7.2:28556035-28556054 | None:intergenic | 45.0% | |
| TGAAGAAGTCGGAGCTACAT+TGG | - | chr7.2:28551833-28551852 | MS.gene27738:CDS | 45.0% | |
| TGGGGGTAGTAGTATTTACC+TGG | + | chr7.2:28553423-28553442 | None:intergenic | 45.0% | |
| ! | AGGCGTGTTTTCGACTTTTC+CGG | - | chr7.2:28554067-28554086 | MS.gene27738:intron | 45.0% |
| ! | ATGGCTTGCAGGTTGTGTAT+TGG | - | chr7.2:28552265-28552284 | MS.gene27738:intron | 45.0% |
| ! | GCTTTTGGTCCTTCCATGAA+TGG | + | chr7.2:28553265-28553284 | None:intergenic | 45.0% |
| ! | GTTGTTATGGCACGAGTTGA+GGG | - | chr7.2:28554013-28554032 | MS.gene27738:intron | 45.0% |
| ! | GTTGTTGGAGGATCAGCTTT+TGG | - | chr7.2:28556331-28556350 | MS.gene27738:CDS | 45.0% |
| ! | TTTGGGGGTACACTAAGTTC+TGG | - | chr7.2:28553805-28553824 | MS.gene27738:intron | 45.0% |
| ! | TTTTGACCGATTGGACGTTG+TGG | + | chr7.2:28552380-28552399 | None:intergenic | 45.0% |
| !! | CAGAGGCACTTAAAGGTTGA+TGG | - | chr7.2:28552060-28552079 | MS.gene27738:intron | 45.0% |
| !!! | AGAAATTTTATTAAAAAAAT+CGG | + | chr7.2:28554195-28554214 | None:intergenic | 5.0% |
| !!! | ATTGATTTAATTTATTTTTT+TGG | - | chr7.2:28552921-28552940 | MS.gene27738:intron | 5.0% |
| AAGCGCATGCTTCTCTTACG+AGG | - | chr7.2:28555479-28555498 | MS.gene27738:intron | 50.0% | |
| AAGGAGATGGGTAGTTTCCG+TGG | - | chr7.2:28555408-28555427 | MS.gene27738:intron | 50.0% | |
| AAGTAGAGTGACACGGACGT+GGG | - | chr7.2:28553171-28553190 | MS.gene27738:intron | 50.0% | |
| ACACTGGGGACACATGTTGT+TGG | - | chr7.2:28556316-28556335 | MS.gene27738:CDS | 50.0% | |
| ACCTAGATCCTCCAAAGCAC+AGG | + | chr7.2:28555302-28555321 | None:intergenic | 50.0% | |
| ACGTCCAATCGGTCAAAAGG+CGG | - | chr7.2:28552382-28552401 | MS.gene27738:intron | 50.0% | |
| ATCTCAATCCTTGTCCCCTC+TGG | - | chr7.2:28554940-28554959 | MS.gene27738:intron | 50.0% | |
| CACAAAGAAGGCAGGTGATC+AGG | + | chr7.2:28555034-28555053 | None:intergenic | 50.0% | |
| CAGCAAAGTATGGCCACGAA+AGG | + | chr7.2:28554225-28554244 | None:intergenic | 50.0% | |
| CCACGACTAACTACATAGGC+TGG | + | chr7.2:28554386-28554405 | None:intergenic | 50.0% | |
| CCAGCCTATGTAGTTAGTCG+TGG | - | chr7.2:28554383-28554402 | MS.gene27738:intron | 50.0% | |
| CCTAGATCCTCCAAAGCACA+GGG | + | chr7.2:28555301-28555320 | None:intergenic | 50.0% | |
| GAAAACCTCAGGCTGTGGTT+GGG | + | chr7.2:28554364-28554383 | None:intergenic | 50.0% | |
| GAAGGTCACGAACTAGAGCA+CGG | + | chr7.2:28553387-28553406 | None:intergenic | 50.0% | |
| GCGAAACATACCCTGTGCTT+TGG | - | chr7.2:28555288-28555307 | MS.gene27738:intron | 50.0% | |
| GGAGGATCTAGGTCCTTCTT+AGG | - | chr7.2:28555309-28555328 | MS.gene27738:intron | 50.0% | |
| GGTTGTTATGGCACGAGTTG+AGG | - | chr7.2:28554012-28554031 | MS.gene27738:intron | 50.0% | |
| GTGTTGCCAACCAAAGTTGG+AGG | + | chr7.2:28554865-28554884 | None:intergenic | 50.0% | |
| TACAATACAATGCGGGCGCA+GGG | + | chr7.2:28554589-28554608 | None:intergenic | 50.0% | |
| TCGGTCAAAAGGCGGCAAAA+AGG | - | chr7.2:28552390-28552409 | MS.gene27738:intron | 50.0% | |
| ! | GCTACAGGTACGTGTGCTTT+TGG | + | chr7.2:28553280-28553299 | None:intergenic | 50.0% |
| ! | GGATTGGCGATCATTGTAGC+TGG | - | chr7.2:28554404-28554423 | MS.gene27738:intron | 50.0% |
| ! | GTCCGTGTCACTCTACTTGA+TGG | + | chr7.2:28553169-28553188 | None:intergenic | 50.0% |
| ! | TTGGAGGATCAGCTTTTGGC+TGG | - | chr7.2:28556335-28556354 | MS.gene27738:CDS | 50.0% |
| ! | TTTGCCGCCTTTTGACCGAT+TGG | + | chr7.2:28552389-28552408 | None:intergenic | 50.0% |
| CAAGTAGAGTGACACGGACG+TGG | - | chr7.2:28553170-28553189 | MS.gene27738:intron | 55.0% | |
| CTGGGGACACATGTTGTTGG+AGG | - | chr7.2:28556319-28556338 | MS.gene27738:CDS | 55.0% | |
| GGAAAACCTCAGGCTGTGGT+TGG | + | chr7.2:28554365-28554384 | None:intergenic | 55.0% | |
| GTACAATACAATGCGGGCGC+AGG | + | chr7.2:28554590-28554609 | None:intergenic | 55.0% | |
| GTGGAAGACAGGCAGACACT+GGG | - | chr7.2:28556301-28556320 | MS.gene27738:CDS | 55.0% | |
| TACTAGGTAGAGTCGGGTGC+AGG | - | chr7.2:28554647-28554666 | MS.gene27738:intron | 55.0% | |
| TCCGGAGACTTGAAACGTGG+AGG | + | chr7.2:28556241-28556260 | None:intergenic | 55.0% | |
| TGACCGATTGGACGTTGTGG+TGG | + | chr7.2:28552377-28552396 | None:intergenic | 55.0% | |
| TGCTCCGGAGACTTGAAACG+TGG | + | chr7.2:28556244-28556263 | None:intergenic | 55.0% | |
| TGGAAGACAGGCAGACACTG+GGG | - | chr7.2:28556302-28556321 | MS.gene27738:CDS | 55.0% | |
| ! | AGCTTTTGCTCGACCACCTG+TGG | - | chr7.2:28556279-28556298 | MS.gene27738:CDS | 55.0% |
| ! | GCCTCCACGTTTCAAGTCTC+CGG | - | chr7.2:28556237-28556256 | MS.gene27738:CDS | 55.0% |
| ! | TTTTGCTCGACCACCTGTGG+TGG | - | chr7.2:28556282-28556301 | MS.gene27738:CDS | 55.0% |
| !! | CCCTGTGCTTTGGAGGATCT+AGG | - | chr7.2:28555298-28555317 | MS.gene27738:intron | 55.0% |
| !! | GGAGTTTGTTGAGTTGCGGC+AGG | + | chr7.2:28553304-28553323 | None:intergenic | 55.0% |
| CCTGGATGAACTGGGGACGA+AGG | + | chr7.2:28553405-28553424 | None:intergenic | 60.0% | |
| CCTTCGTCCCCAGTTCATCC+AGG | - | chr7.2:28553402-28553421 | MS.gene27738:intron | 60.0% | |
| GACATCCCAACCACAGCCTG+AGG | - | chr7.2:28554356-28554375 | MS.gene27738:intron | 60.0% | |
| GGCTGGAAAACCTCAGGCTG+TGG | + | chr7.2:28554369-28554388 | None:intergenic | 60.0% | |
| GGTGGAAGACAGGCAGACAC+TGG | - | chr7.2:28556300-28556319 | MS.gene27738:CDS | 60.0% | |
| GTCTGCCTGTCTTCCACCAC+AGG | + | chr7.2:28556298-28556317 | None:intergenic | 60.0% | |
| TCAGGCAACCAGAGGGGACA+AGG | + | chr7.2:28554951-28554970 | None:intergenic | 60.0% | |
| TGAGTTGCGGCAGGAGCTAC+AGG | + | chr7.2:28553295-28553314 | None:intergenic | 60.0% | |
| TGCCTGTCTTCCACCACAGG+TGG | + | chr7.2:28556295-28556314 | None:intergenic | 60.0% | |
| ! | GACCACCTGTGGTGGAAGAC+AGG | - | chr7.2:28556290-28556309 | MS.gene27738:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 28551726 | 28556441 | 28551726 | ID=MS.gene27738 |
| chr7.2 | mRNA | 28551726 | 28556441 | 28551726 | ID=MS.gene27738.t1;Parent=MS.gene27738 |
| chr7.2 | exon | 28556093 | 28556441 | 28556093 | ID=MS.gene27738.t1.exon1;Parent=MS.gene27738.t1 |
| chr7.2 | CDS | 28556093 | 28556441 | 28556093 | ID=cds.MS.gene27738.t1;Parent=MS.gene27738.t1 |
| chr7.2 | exon | 28555607 | 28556035 | 28555607 | ID=MS.gene27738.t1.exon2;Parent=MS.gene27738.t1 |
| chr7.2 | CDS | 28555607 | 28556035 | 28555607 | ID=cds.MS.gene27738.t1;Parent=MS.gene27738.t1 |
| chr7.2 | exon | 28554744 | 28554892 | 28554744 | ID=MS.gene27738.t1.exon3;Parent=MS.gene27738.t1 |
| chr7.2 | CDS | 28554744 | 28554892 | 28554744 | ID=cds.MS.gene27738.t1;Parent=MS.gene27738.t1 |
| chr7.2 | exon | 28552295 | 28552349 | 28552295 | ID=MS.gene27738.t1.exon4;Parent=MS.gene27738.t1 |
| chr7.2 | CDS | 28552295 | 28552349 | 28552295 | ID=cds.MS.gene27738.t1;Parent=MS.gene27738.t1 |
| chr7.2 | exon | 28551726 | 28551997 | 28551726 | ID=MS.gene27738.t1.exon5;Parent=MS.gene27738.t1 |
| chr7.2 | CDS | 28551726 | 28551997 | 28551726 | ID=cds.MS.gene27738.t1;Parent=MS.gene27738.t1 |
| Gene Sequence |
| Protein sequence |
