Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27990.t1 | XP_013446709.1 | 100 | 428 | 0 | 0 | 1 | 428 | 1 | 428 | 1.60E-245 | 858.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27990.t1 | Q9SAF1 | 86.9 | 428 | 55 | 1 | 1 | 428 | 1 | 427 | 4.9e-219 | 761.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27990.t1 | A0A072TU70 | 100.0 | 428 | 0 | 0 | 1 | 428 | 1 | 428 | 1.2e-245 | 858.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene27990 | MS.gene049055 | PPI |
| MS.gene27990 | MS.gene05947 | PPI |
| MS.gene27990 | MS.gene015837 | PPI |
| MS.gene27990 | MS.gene20134 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27990.t1 | MTR_8g089630 | 100.000 | 428 | 0 | 0 | 1 | 428 | 1 | 428 | 0.0 | 895 |
| MS.gene27990.t1 | MTR_2g008050 | 34.550 | 411 | 219 | 8 | 10 | 418 | 10 | 372 | 1.70e-74 | 238 |
| MS.gene27990.t1 | MTR_7g026230 | 34.550 | 411 | 219 | 8 | 10 | 418 | 10 | 372 | 2.11e-72 | 232 |
| MS.gene27990.t1 | MTR_3g095530 | 34.474 | 409 | 222 | 8 | 10 | 418 | 10 | 372 | 4.82e-72 | 231 |
| MS.gene27990.t1 | MTR_2g096840 | 34.550 | 411 | 219 | 8 | 10 | 418 | 10 | 372 | 6.23e-72 | 231 |
| MS.gene27990.t1 | MTR_6g004000 | 34.063 | 411 | 221 | 8 | 10 | 418 | 10 | 372 | 7.47e-72 | 231 |
| MS.gene27990.t1 | MTR_7g093260 | 34.845 | 419 | 207 | 10 | 10 | 418 | 10 | 372 | 1.09e-71 | 230 |
| MS.gene27990.t1 | MTR_0015s0130 | 34.550 | 411 | 219 | 8 | 10 | 418 | 10 | 372 | 1.61e-71 | 230 |
| MS.gene27990.t1 | MTR_7g027185 | 32.048 | 415 | 242 | 11 | 6 | 416 | 3 | 381 | 5.70e-60 | 200 |
| MS.gene27990.t1 | MTR_7g027185 | 32.481 | 391 | 231 | 9 | 6 | 396 | 3 | 360 | 2.67e-59 | 197 |
| MS.gene27990.t1 | MTR_7g027185 | 33.923 | 339 | 196 | 7 | 6 | 344 | 3 | 313 | 1.16e-55 | 187 |
| MS.gene27990.t1 | MTR_5g066400 | 29.039 | 458 | 247 | 14 | 9 | 416 | 9 | 438 | 1.16e-45 | 164 |
| MS.gene27990.t1 | MTR_8g464900 | 28.345 | 441 | 239 | 13 | 9 | 400 | 9 | 421 | 1.30e-42 | 155 |
| MS.gene27990.t1 | MTR_5g066400 | 27.802 | 464 | 230 | 16 | 9 | 422 | 9 | 417 | 3.29e-37 | 140 |
| MS.gene27990.t1 | MTR_5g066400 | 28.351 | 388 | 219 | 12 | 9 | 349 | 9 | 384 | 2.35e-36 | 138 |
| MS.gene27990.t1 | MTR_2g445210 | 26.180 | 466 | 254 | 13 | 4 | 416 | 2 | 430 | 9.63e-34 | 131 |
| MS.gene27990.t1 | MTR_3g030550 | 25.728 | 412 | 246 | 13 | 9 | 417 | 3 | 357 | 1.02e-24 | 104 |
| MS.gene27990.t1 | MTR_8g007440 | 26.937 | 271 | 163 | 6 | 98 | 349 | 12 | 266 | 1.09e-23 | 100 |
| MS.gene27990.t1 | MTR_2g445210 | 24.682 | 393 | 226 | 10 | 4 | 345 | 2 | 375 | 7.85e-23 | 99.8 |
| MS.gene27990.t1 | MTR_3g067945 | 25.926 | 270 | 173 | 6 | 5 | 267 | 17 | 266 | 1.27e-14 | 76.6 |
| MS.gene27990.t1 | MTR_3g010170 | 24.514 | 257 | 162 | 9 | 110 | 353 | 180 | 417 | 6.76e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27990.t1 | AT1G13180 | 87.617 | 428 | 52 | 1 | 1 | 428 | 1 | 427 | 0.0 | 804 |
| MS.gene27990.t1 | AT2G42100 | 34.634 | 410 | 222 | 9 | 9 | 418 | 10 | 373 | 1.48e-73 | 235 |
| MS.gene27990.t1 | AT3G53750 | 34.390 | 410 | 219 | 8 | 10 | 417 | 10 | 371 | 3.08e-72 | 232 |
| MS.gene27990.t1 | AT3G53750 | 34.390 | 410 | 219 | 8 | 10 | 417 | 10 | 371 | 3.08e-72 | 232 |
| MS.gene27990.t1 | AT2G37620 | 34.390 | 410 | 219 | 8 | 10 | 417 | 10 | 371 | 3.08e-72 | 232 |
| MS.gene27990.t1 | AT2G37620 | 34.390 | 410 | 219 | 8 | 10 | 417 | 10 | 371 | 3.08e-72 | 232 |
| MS.gene27990.t1 | AT2G37620 | 34.390 | 410 | 219 | 8 | 10 | 417 | 10 | 371 | 3.08e-72 | 232 |
| MS.gene27990.t1 | AT2G37620 | 34.390 | 410 | 219 | 8 | 10 | 417 | 10 | 371 | 3.08e-72 | 232 |
| MS.gene27990.t1 | AT3G12110 | 34.307 | 411 | 220 | 8 | 10 | 418 | 10 | 372 | 3.70e-72 | 231 |
| MS.gene27990.t1 | AT5G09810 | 34.550 | 411 | 219 | 8 | 10 | 418 | 10 | 372 | 7.74e-72 | 231 |
| MS.gene27990.t1 | AT5G59370 | 34.606 | 419 | 208 | 10 | 10 | 418 | 10 | 372 | 2.62e-71 | 229 |
| MS.gene27990.t1 | AT5G59370 | 34.606 | 419 | 208 | 10 | 10 | 418 | 10 | 372 | 2.62e-71 | 229 |
| MS.gene27990.t1 | AT3G46520 | 34.606 | 419 | 208 | 10 | 10 | 418 | 10 | 372 | 4.15e-71 | 229 |
| MS.gene27990.t1 | AT3G46520 | 34.606 | 419 | 208 | 10 | 10 | 418 | 10 | 372 | 4.15e-71 | 229 |
| MS.gene27990.t1 | AT3G18780 | 33.741 | 409 | 225 | 8 | 10 | 418 | 10 | 372 | 5.35e-70 | 226 |
| MS.gene27990.t1 | AT3G18780 | 33.741 | 409 | 225 | 8 | 10 | 418 | 10 | 372 | 5.35e-70 | 226 |
| MS.gene27990.t1 | AT1G49240 | 33.741 | 409 | 225 | 8 | 10 | 418 | 10 | 372 | 7.14e-70 | 226 |
| MS.gene27990.t1 | AT2G42090 | 31.951 | 410 | 224 | 8 | 10 | 417 | 4 | 360 | 2.51e-66 | 216 |
| MS.gene27990.t1 | AT3G18780 | 33.504 | 391 | 214 | 8 | 10 | 400 | 10 | 354 | 2.79e-66 | 216 |
| MS.gene27990.t1 | AT2G42170 | 35.196 | 358 | 198 | 7 | 64 | 421 | 4 | 327 | 2.49e-63 | 207 |
| MS.gene27990.t1 | AT2G42170 | 35.196 | 358 | 198 | 7 | 64 | 421 | 4 | 327 | 2.49e-63 | 207 |
| MS.gene27990.t1 | AT3G27000 | 31.667 | 420 | 237 | 11 | 6 | 416 | 3 | 381 | 2.45e-60 | 201 |
| MS.gene27990.t1 | AT2G42170 | 34.421 | 337 | 187 | 7 | 64 | 400 | 4 | 306 | 1.05e-57 | 192 |
| MS.gene27990.t1 | AT2G42170 | 34.421 | 337 | 187 | 7 | 64 | 400 | 4 | 306 | 1.05e-57 | 192 |
| MS.gene27990.t1 | AT1G18450 | 29.451 | 455 | 245 | 12 | 9 | 416 | 9 | 434 | 2.67e-49 | 174 |
| MS.gene27990.t1 | AT3G33520 | 27.074 | 458 | 240 | 13 | 10 | 419 | 5 | 416 | 1.55e-35 | 136 |
| MS.gene27990.t1 | AT2G42170 | 31.579 | 247 | 143 | 5 | 175 | 421 | 9 | 229 | 1.84e-30 | 117 |
| MS.gene27990.t1 | AT3G60830 | 25.962 | 416 | 240 | 13 | 9 | 417 | 3 | 357 | 3.94e-25 | 106 |
| MS.gene27990.t1 | AT3G12380 | 25.979 | 281 | 173 | 9 | 10 | 278 | 22 | 279 | 3.14e-15 | 78.6 |
| MS.gene27990.t1 | AT3G12380 | 25.704 | 284 | 176 | 9 | 10 | 278 | 22 | 285 | 3.05e-14 | 75.5 |
| MS.gene27990.t1 | AT1G73910 | 30.216 | 139 | 92 | 2 | 9 | 147 | 9 | 142 | 2.32e-12 | 64.7 |
| MS.gene27990.t1 | AT1G73910 | 30.216 | 139 | 92 | 2 | 9 | 147 | 9 | 142 | 2.32e-12 | 64.7 |
Find 101 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGATCTTGATTTCTTTAT+TGG | 0.095428 | 4.4:+11711595 | MS.gene27990:CDS |
| GAAGTTCTTCTAAAGGAAAT+TGG | 0.220793 | 4.4:+11711545 | MS.gene27990:CDS |
| GGGATGCCATGGAGCGATTT+TGG | 0.248634 | 4.4:+11711698 | MS.gene27990:CDS |
| TTGTTGCAGGTATACGAAAA+TGG | 0.249521 | 4.4:+11711444 | MS.gene27990:intron |
| GTTGCGGATGGTTATGTTAT+TGG | 0.252532 | 4.4:+11712412 | MS.gene27990:CDS |
| GCAGCTGAAGCGCGCCTTAA+TGG | 0.265252 | 4.4:+11714429 | MS.gene27990:CDS |
| GAATATGGAGCCCCAGTCTT+TGG | 0.285326 | 4.4:-11713289 | None:intergenic |
| GCTCCATATTCTTGTGATAT+TGG | 0.295202 | 4.4:+11713301 | MS.gene27990:CDS |
| TCAACCTGACCATGCTTAAT+CGG | 0.327099 | 4.4:-11711670 | None:intergenic |
| ATTGGCTATGAACGCTTTCT+TGG | 0.327285 | 4.4:+11713319 | MS.gene27990:CDS |
| CAAACCAAACTGCAAATCTT+TGG | 0.333787 | 4.4:-11715047 | None:intergenic |
| TATACGAAAATGGGCTTTGC+TGG | 0.344789 | 4.4:+11711454 | MS.gene27990:CDS |
| TAGCCAATATCACAAGAATA+TGG | 0.346527 | 4.4:-11713304 | None:intergenic |
| CCTGAGAGTCGTGAGTATAC+TGG | 0.349298 | 4.4:+11711799 | MS.gene27990:CDS |
| CTATCCAAAGATTTGCAGTT+TGG | 0.357424 | 4.4:+11715043 | MS.gene27990:CDS |
| AAGGCAGAATACGAAGAATA+TGG | 0.364575 | 4.4:+11716210 | MS.gene27990:CDS |
| CACAAGGAGATCATTATATA+AGG | 0.369729 | 4.4:+11713980 | MS.gene27990:CDS |
| AGCATGGTCAGGTTGAGAAT+TGG | 0.376747 | 4.4:+11711677 | MS.gene27990:CDS |
| GCCACTTCGAACGAGTCTTC+TGG | 0.379121 | 4.4:-11712919 | None:intergenic |
| TCAGCATAATGCTGGGGTTA+TGG | 0.382607 | 4.4:+11711573 | MS.gene27990:CDS |
| TAATACATCCCCTTGAAAAC+AGG | 0.382856 | 4.4:-11716255 | None:intergenic |
| ATCAAATCAGTTCCTATTGC+GGG | 0.386908 | 4.4:+11712442 | MS.gene27990:CDS |
| GCATGGTCAGGTTGAGAATT+GGG | 0.389411 | 4.4:+11711678 | MS.gene27990:CDS |
| CAAAGATTTGCAGTTTGGTT+TGG | 0.389429 | 4.4:+11715048 | MS.gene27990:CDS |
| TCTCCATTGCTTGATATACT+TGG | 0.404016 | 4.4:-11713257 | None:intergenic |
| TCTGTGCTTGCTCTCGCTGC+TGG | 0.404421 | 4.4:+11711874 | MS.gene27990:CDS |
| TGTTGCAGGTATACGAAAAT+GGG | 0.405987 | 4.4:+11711445 | MS.gene27990:intron |
| TTTCAGAATATAGTGTTGTC+AGG | 0.422885 | 4.4:+11714330 | MS.gene27990:intron |
| CATTGCTTGATATACTTGGC+TGG | 0.423106 | 4.4:-11713253 | None:intergenic |
| AATGATCTCCTTGTGTCAAT+TGG | 0.425483 | 4.4:-11713972 | None:intergenic |
| TGCTGGCTACACTACGTCTA+AGG | 0.427772 | 4.4:+11711891 | MS.gene27990:CDS |
| AGATTTGCAGTTTGGTTTGG+TGG | 0.432383 | 4.4:+11715051 | MS.gene27990:CDS |
| CTGAGAGTCGTGAGTATACT+GGG | 0.432628 | 4.4:+11711800 | MS.gene27990:CDS |
| ACAGGAGTCGTAGTTGATAT+CGG | 0.443109 | 4.4:+11712364 | MS.gene27990:CDS |
| TCGTTAATCGCAACCACACT+AGG | 0.456949 | 4.4:-11711502 | None:intergenic |
| CATTGATTTGTGCAGGAAAG+AGG | 0.458746 | 4.4:+11712883 | MS.gene27990:intron |
| TGGATTGCTCAGCATAATGC+TGG | 0.465247 | 4.4:+11711565 | MS.gene27990:CDS |
| GTAACATCCTTTCCCGCAAT+AGG | 0.466496 | 4.4:-11712454 | None:intergenic |
| GTTGTCATCGACAATGGCTC+CGG | 0.466593 | 4.4:+11711233 | MS.gene27990:CDS |
| CACCTGCTCTGACATAGTTA+AGG | 0.470644 | 4.4:+11712969 | MS.gene27990:CDS |
| ATCAGTTCCTATTGCGGGAA+AGG | 0.476954 | 4.4:+11712447 | MS.gene27990:CDS |
| CCAGTATACTCACGACTCTC+AGG | 0.480188 | 4.4:-11711799 | None:intergenic |
| CGCTTCAGCTGCAAGGACAC+GGG | 0.485886 | 4.4:-11714418 | None:intergenic |
| CAACCTGACCATGCTTAATC+GGG | 0.487813 | 4.4:-11711669 | None:intergenic |
| GAGAGCAAGCACAGAATTCA+CGG | 0.488016 | 4.4:-11711866 | None:intergenic |
| CTGCAAATCTTTGGATAGGA+TGG | 0.489552 | 4.4:-11715038 | None:intergenic |
| AAAAGAAAATAATGATCCTC+AGG | 0.490852 | 4.4:-11711754 | None:intergenic |
| ATGCACTTGTCTATTACAAC+AGG | 0.494188 | 4.4:-11713939 | None:intergenic |
| AGGCGCTGTCAACGGACTCT+CGG | 0.495487 | 4.4:-11711779 | None:intergenic |
| ATAACATAACCATCCGCAAC+TGG | 0.499019 | 4.4:-11712409 | None:intergenic |
| TACCTACCCGCATTAGCTGC+TGG | 0.504471 | 4.4:-11712486 | None:intergenic |
| ACAGCAGGACGAGAAGCAGC+TGG | 0.509967 | 4.4:-11711212 | None:intergenic |
| GAAGTCGCTGCTATATATCT+CGG | 0.516026 | 4.4:-11713904 | None:intergenic |
| TTTCGTCCAGCAGCTAATGC+GGG | 0.520923 | 4.4:+11712480 | MS.gene27990:CDS |
| CTGAGTACATTGACCTCGAC+TGG | 0.521211 | 4.4:-11715015 | None:intergenic |
| GTCGTAGTTGATATCGGAGA+TGG | 0.522188 | 4.4:+11712370 | MS.gene27990:CDS |
| AGGAGGATCAACAATGTTCA+AGG | 0.526518 | 4.4:+11714350 | MS.gene27990:CDS |
| AGAGGCGTTAAACCAAAGAC+TGG | 0.527817 | 4.4:+11713277 | MS.gene27990:CDS |
| CAATCGAGAAGTTCTTCTAA+AGG | 0.532385 | 4.4:+11711538 | MS.gene27990:CDS |
| AAGTCGCTGCTATATATCTC+GGG | 0.535811 | 4.4:-11713903 | None:intergenic |
| TTACCCGATTAAGCATGGTC+AGG | 0.538788 | 4.4:+11711666 | MS.gene27990:CDS |
| GCGCTTCAGCTGCAAGGACA+CGG | 0.543689 | 4.4:-11714419 | None:intergenic |
| AGTGTATATTCAATTATTTG+CGG | 0.546766 | 4.4:+11711725 | MS.gene27990:CDS |
| GGATTGCTCAGCATAATGCT+GGG | 0.548668 | 4.4:+11711566 | MS.gene27990:CDS |
| CCTGCTGTTGTCATCGACAA+TGG | 0.550059 | 4.4:+11711227 | MS.gene27990:CDS |
| CAAACTGCAAATCTTTGGAT+AGG | 0.553466 | 4.4:-11715042 | None:intergenic |
| TTCACGGCAATGTAAAGTCC+AGG | 0.555616 | 4.4:-11711850 | None:intergenic |
| TCGTAGTTGATATCGGAGAT+GGG | 0.559617 | 4.4:+11712371 | MS.gene27990:CDS |
| GGTTGAGAATTGGGATGCCA+TGG | 0.561166 | 4.4:+11711687 | MS.gene27990:CDS |
| CGACTCTCAGGCGCTGTCAA+CGG | 0.571890 | 4.4:-11711787 | None:intergenic |
| AACCTTAACTATGTCAGAGC+AGG | 0.574256 | 4.4:-11712971 | None:intergenic |
| TTGTCATCGACAATGGCTCC+GGG | 0.583211 | 4.4:+11711234 | MS.gene27990:CDS |
| CTGCTGCCAAAATCGCTCCA+TGG | 0.585282 | 4.4:-11711704 | None:intergenic |
| TTATTTGCGGTGTGATCCTG+AGG | 0.590272 | 4.4:+11711738 | MS.gene27990:CDS |
| CCATTGTCGATGACAACAGC+AGG | 0.592798 | 4.4:-11711227 | None:intergenic |
| CATCAAATCAGTTCCTATTG+CGG | 0.593258 | 4.4:+11712441 | MS.gene27990:CDS |
| GAGGCGTTAAACCAAAGACT+GGG | 0.595159 | 4.4:+11713278 | MS.gene27990:CDS |
| TACACATGTTGTACCAGTTG+CGG | 0.599702 | 4.4:+11712396 | MS.gene27990:CDS |
| TAAGGCGCGCTTCAGCTGCA+AGG | 0.600648 | 4.4:-11714425 | None:intergenic |
| CTCACTTACCCGATTAAGCA+TGG | 0.602719 | 4.4:+11711661 | MS.gene27990:CDS |
| AAGACTCGTTCGAAGTGGCT+CGG | 0.603015 | 4.4:+11712923 | MS.gene27990:CDS |
| TTGTCTATTACAACAGGCAA+AGG | 0.608553 | 4.4:-11713933 | None:intergenic |
| CAGCAGGACGAGAAGCAGCT+GGG | 0.616158 | 4.4:-11711211 | None:intergenic |
| CAGCCAAGTATATCAAGCAA+TGG | 0.617742 | 4.4:+11713254 | MS.gene27990:CDS |
| TGAACGCTTTCTTGGCCCTG+AGG | 0.617976 | 4.4:+11713327 | MS.gene27990:CDS |
| ACCAGAAGACTCGTTCGAAG+TGG | 0.622925 | 4.4:+11712918 | MS.gene27990:CDS |
| CGAAGTGGCTCGGAAAGTGA+AGG | 0.622978 | 4.4:+11712933 | MS.gene27990:CDS |
| CCTTGAAAACAGGATTTGTG+CGG | 0.635643 | 4.4:-11716245 | None:intergenic |
| CATGTTGTACCAGTTGCGGA+TGG | 0.639900 | 4.4:+11712400 | MS.gene27990:CDS |
| TCCACAGTCACATCCAGTCG+AGG | 0.643643 | 4.4:+11715002 | MS.gene27990:intron |
| CGTAGTTGATATCGGAGATG+GGG | 0.648015 | 4.4:+11712372 | MS.gene27990:CDS |
| CAGAATATAGTGTTGTCAGG+AGG | 0.650438 | 4.4:+11714333 | MS.gene27990:intron |
| AAGTATATCAAGCAATGGAG+AGG | 0.653283 | 4.4:+11713259 | MS.gene27990:CDS |
| TGTGCAGGCTTGTCATACAA+AGG | 0.662053 | 4.4:+11716191 | MS.gene27990:intron |
| GATTGCTCAGCATAATGCTG+GGG | 0.663436 | 4.4:+11711567 | MS.gene27990:CDS |
| TATTACAACAGGCAAAGGAG+TGG | 0.671222 | 4.4:-11713928 | None:intergenic |
| ACTTCGAACGAGTCTTCTGG+TGG | 0.687169 | 4.4:-11712916 | None:intergenic |
| AGTCTGCGCCAATTGACACA+AGG | 0.690930 | 4.4:+11713964 | MS.gene27990:CDS |
| ACACTAGGAACAATAAAACA+AGG | 0.696455 | 4.4:-11711487 | None:intergenic |
| AGGCGTTAAACCAAAGACTG+GGG | 0.735801 | 4.4:+11713279 | MS.gene27990:CDS |
| TGAGAGTCGTGAGTATACTG+GGG | 0.741187 | 4.4:+11711801 | MS.gene27990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAATTAACAATATTAAAATA+TGG | - | chr4.4:11715706-11715725 | None:intergenic | 10.0% |
| !!! | AAGTTTTTTTTTTCATAAAA+AGG | - | chr4.4:11715837-11715856 | None:intergenic | 10.0% |
| !! | TAAAAAAAGAAAAAAAAGGA+TGG | - | chr4.4:11715913-11715932 | None:intergenic | 15.0% |
| !! | TTGAAATATTGAAATAAAGT+TGG | - | chr4.4:11714065-11714084 | None:intergenic | 15.0% |
| !!! | AGATTTTGTATTATTATGAT+AGG | + | chr4.4:11711937-11711956 | MS.gene27990:intron | 15.0% |
| !!! | ATTATTTTGATTTTTAGACA+TGG | - | chr4.4:11715157-11715176 | None:intergenic | 15.0% |
| !!! | ATTTCTTTTTTAGTGAATTA+AGG | + | chr4.4:11713139-11713158 | MS.gene27990:intron | 15.0% |
| !!! | TAACATTCTAATTTTATACA+AGG | - | chr4.4:11712514-11712533 | None:intergenic | 15.0% |
| !!! | TATTGTTTTTTGAAGTTTTT+AGG | + | chr4.4:11712311-11712330 | MS.gene27990:intron | 15.0% |
| !!! | TTTCTTTTTTAGTGAATTAA+GGG | + | chr4.4:11713140-11713159 | MS.gene27990:intron | 15.0% |
| !! | AAAACCAGAAGATATAATAA+GGG | - | chr4.4:11713554-11713573 | None:intergenic | 20.0% |
| !! | AATCGTAAATTCATTTAATG+TGG | - | chr4.4:11715401-11715420 | None:intergenic | 20.0% |
| !! | AGTGTATATTCAATTATTTG+CGG | + | chr4.4:11711725-11711744 | MS.gene27990:CDS | 20.0% |
| !! | ATAAAATAACAATGTGTCAA+TGG | - | chr4.4:11714568-11714587 | None:intergenic | 20.0% |
| !! | TAAAACCAGAAGATATAATA+AGG | - | chr4.4:11713555-11713574 | None:intergenic | 20.0% |
| !! | TAATGTGTGTTTATAATTTC+TGG | + | chr4.4:11716161-11716180 | MS.gene27990:intron | 20.0% |
| !! | TTCAGTATAATTATATGTGT+CGG | + | chr4.4:11714826-11714845 | MS.gene27990:intron | 20.0% |
| !! | TTCTTTAGCATAATCATTTA+AGG | + | chr4.4:11713016-11713035 | MS.gene27990:intron | 20.0% |
| !! | TTGAATATAGAATGTTATGT+TGG | + | chr4.4:11712257-11712276 | MS.gene27990:intron | 20.0% |
| !!! | AATTTAGTCTTTCAAATTGT+AGG | - | chr4.4:11715749-11715768 | None:intergenic | 20.0% |
| !!! | AGATTTTAAAATTAAGGAAC+AGG | - | chr4.4:11712551-11712570 | None:intergenic | 20.0% |
| !!! | AGTCACAGATTTTAAAATTA+AGG | - | chr4.4:11712557-11712576 | None:intergenic | 20.0% |
| !!! | ATGAATAAGATCTAAAATCA+TGG | - | chr4.4:11712764-11712783 | None:intergenic | 20.0% |
| !!! | ATTAACTCCTTAATTTTACA+CGG | - | chr4.4:11715497-11715516 | None:intergenic | 20.0% |
| !!! | TATTATATCTTCTGGTTTTA+AGG | + | chr4.4:11713555-11713574 | MS.gene27990:intron | 20.0% |
| !!! | TGACAATTTAATCTCTAAAA+AGG | + | chr4.4:11715547-11715566 | MS.gene27990:intron | 20.0% |
| !!! | TGATTTTCTCAAATTATTAG+CGG | - | chr4.4:11714801-11714820 | None:intergenic | 20.0% |
| !!! | TTGTATTATGTTGATAGAAT+TGG | + | chr4.4:11712017-11712036 | MS.gene27990:intron | 20.0% |
| !!! | TTTTTCTTTTACCTTTTTCT+GGG | + | chr4.4:11715115-11715134 | MS.gene27990:intron | 20.0% |
| !!! | TTTTTTCTTTTACCTTTTTC+TGG | + | chr4.4:11715114-11715133 | MS.gene27990:intron | 20.0% |
| ! | AAAAAGAAAGTAAACCCAAT+TGG | - | chr4.4:11711288-11711307 | None:intergenic | 25.0% |
| ! | AAAAGAAAATAATGATCCTC+AGG | - | chr4.4:11711757-11711776 | None:intergenic | 25.0% |
| ! | AAAAGAAAGTAAACCCAATT+GGG | - | chr4.4:11711287-11711306 | None:intergenic | 25.0% |
| ! | AAAGTAAAAAAACTACATCC+AGG | - | chr4.4:11715334-11715353 | None:intergenic | 25.0% |
| ! | AACTAAAAAATATCCCATTC+AGG | - | chr4.4:11711352-11711371 | None:intergenic | 25.0% |
| ! | AACTTGTAAATCTCAATCTT+TGG | + | chr4.4:11714157-11714176 | MS.gene27990:intron | 25.0% |
| ! | AAGATCATAAATCAAAGATC+TGG | - | chr4.4:11714235-11714254 | None:intergenic | 25.0% |
| ! | AAGTAAAAAAACTACATCCA+GGG | - | chr4.4:11715333-11715352 | None:intergenic | 25.0% |
| ! | ACTTATGATGTTGGATAAAA+CGG | + | chr4.4:11715210-11715229 | MS.gene27990:intron | 25.0% |
| ! | AGAATTGAATATTACAACCT+TGG | - | chr4.4:11712817-11712836 | None:intergenic | 25.0% |
| ! | AGATCATAAATCAAAGATCT+GGG | - | chr4.4:11714234-11714253 | None:intergenic | 25.0% |
| ! | ATAATCATTTAAGGAGTTTG+TGG | + | chr4.4:11713025-11713044 | MS.gene27990:intron | 25.0% |
| ! | ATCATTAAGAACATGTAAAG+TGG | - | chr4.4:11714274-11714293 | None:intergenic | 25.0% |
| ! | ATGATTTCTTTAGTAGATGA+AGG | - | chr4.4:11713775-11713794 | None:intergenic | 25.0% |
| ! | ATGCATGTTAACAAACTAAA+TGG | + | chr4.4:11715423-11715442 | MS.gene27990:intron | 25.0% |
| ! | ATTCTAAACACAAAATGCTT+TGG | + | chr4.4:11712136-11712155 | MS.gene27990:intron | 25.0% |
| ! | CACTCAAAATTTAGATAACT+AGG | + | chr4.4:11715776-11715795 | MS.gene27990:intron | 25.0% |
| ! | GACATTGAACAAAAAATGTT+CGG | - | chr4.4:11713094-11713113 | None:intergenic | 25.0% |
| ! | GTTTATTCATGACAGAAAAT+GGG | - | chr4.4:11713477-11713496 | None:intergenic | 25.0% |
| ! | TATAATCCTTCAAATTGTCT+TGG | - | chr4.4:11715633-11715652 | None:intergenic | 25.0% |
| ! | TGAAATGAAAAGGACAAAAT+GGG | - | chr4.4:11714315-11714334 | None:intergenic | 25.0% |
| ! | TGTTTATTCATGACAGAAAA+TGG | - | chr4.4:11713478-11713497 | None:intergenic | 25.0% |
| ! | TTAAGAACAGTAAGAAACTA+TGG | - | chr4.4:11715879-11715898 | None:intergenic | 25.0% |
| ! | TTGCTTATCATTTGTGATTT+GGG | + | chr4.4:11715357-11715376 | MS.gene27990:intron | 25.0% |
| ! | TTTGCTTATCATTTGTGATT+TGG | + | chr4.4:11715356-11715375 | MS.gene27990:intron | 25.0% |
| !! | AATAATAATCTCTTTTGACC+TGG | + | chr4.4:11715171-11715190 | MS.gene27990:intron | 25.0% |
| !! | AATATCATGTTTTCAAACCA+AGG | - | chr4.4:11715470-11715489 | None:intergenic | 25.0% |
| !! | ATAGAATTGGAATAATGGAA+TGG | + | chr4.4:11712030-11712049 | MS.gene27990:intron | 25.0% |
| !! | ATTGACTCAAAAGACTAATT+TGG | + | chr4.4:11715652-11715671 | MS.gene27990:intron | 25.0% |
| !! | CCACATGATTTAAAATAATG+AGG | + | chr4.4:11714614-11714633 | MS.gene27990:intron | 25.0% |
| !! | GATTGATGATTTGAATTTCT+TGG | + | chr4.4:11715679-11715698 | MS.gene27990:intron | 25.0% |
| !! | TGTATGCTTGTTAACATTAA+AGG | + | chr4.4:11712576-11712595 | MS.gene27990:intron | 25.0% |
| !! | TGTTGATAGAATTGGAATAA+TGG | + | chr4.4:11712025-11712044 | MS.gene27990:intron | 25.0% |
| !! | TGTTTTGCCATATTAAGTTT+TGG | + | chr4.4:11712785-11712804 | MS.gene27990:intron | 25.0% |
| !! | TTGGTTTGAAAACATGATAT+TGG | + | chr4.4:11715469-11715488 | MS.gene27990:intron | 25.0% |
| !!! | AATAATGAGGTGTTAGTTTT+TGG | + | chr4.4:11714627-11714646 | MS.gene27990:intron | 25.0% |
| !!! | ATATGTTTATTGGTTTGATC+TGG | + | chr4.4:11714946-11714965 | MS.gene27990:intron | 25.0% |
| !!! | ATCAACACCTGAATTTTTTA+CGG | + | chr4.4:11715086-11715105 | MS.gene27990:CDS | 25.0% |
| !!! | ATTTTGGTCATTGAATCAAT+AGG | + | chr4.4:11713821-11713840 | MS.gene27990:intron | 25.0% |
| !!! | ATTTTGTTGCTTTTCCTTTT+TGG | + | chr4.4:11713583-11713602 | MS.gene27990:intron | 25.0% |
| !!! | CACTATATTCTGAAATGAAA+AGG | - | chr4.4:11714325-11714344 | None:intergenic | 25.0% |
| !!! | CCTCATTATTTTAAATCATG+TGG | - | chr4.4:11714617-11714636 | None:intergenic | 25.0% |
| !!! | CTTTTTTTCTTTTCACTTCT+TGG | + | chr4.4:11714977-11714996 | MS.gene27990:intron | 25.0% |
| !!! | GTTTTATTTATTCAAACCTG+TGG | + | chr4.4:11712077-11712096 | MS.gene27990:intron | 25.0% |
| !!! | TAAAAATGTGTTTTTGTTGC+AGG | + | chr4.4:11711431-11711450 | MS.gene27990:intron | 25.0% |
| !!! | TTTTGTTGCTTTTCCTTTTT+GGG | + | chr4.4:11713584-11713603 | MS.gene27990:intron | 25.0% |
| AAAGGACATCTTAATCTACA+AGG | - | chr4.4:11715819-11715838 | None:intergenic | 30.0% | |
| AACGATTTCTAAATCCTGAT+AGG | + | chr4.4:11713612-11713631 | MS.gene27990:intron | 30.0% | |
| AACTAAATGGTTACGACTTA+TGG | + | chr4.4:11715436-11715455 | MS.gene27990:intron | 30.0% | |
| AAGAAAAAAAAGGATGGCAA+CGG | - | chr4.4:11715907-11715926 | None:intergenic | 30.0% | |
| AAGCAAAGAAACAAAGCTAT+TGG | - | chr4.4:11713061-11713080 | None:intergenic | 30.0% | |
| AAGCATACCGTAAAAAATTC+AGG | - | chr4.4:11715096-11715115 | None:intergenic | 30.0% | |
| AATAAACACCTTTCTTAGTG+GGG | + | chr4.4:11713490-11713509 | MS.gene27990:intron | 30.0% | |
| AATAGAAATGGAGTGAGAAA+AGG | - | chr4.4:11711262-11711281 | None:intergenic | 30.0% | |
| AATGCTAATCATGGATGAAT+GGG | + | chr4.4:11712661-11712680 | MS.gene27990:intron | 30.0% | |
| AATTCAACACAAACCCAATT+CGG | - | chr4.4:11711409-11711428 | None:intergenic | 30.0% | |
| AATTTAGTCTCTGTAATGGT+AGG | + | chr4.4:11715521-11715540 | MS.gene27990:intron | 30.0% | |
| ACACTAGGAACAATAAAACA+AGG | - | chr4.4:11711490-11711509 | None:intergenic | 30.0% | |
| ACAGAGATCAATAGCTAATT+GGG | - | chr4.4:11713736-11713755 | None:intergenic | 30.0% | |
| ACGATTTCTAAATCCTGATA+GGG | + | chr4.4:11713613-11713632 | MS.gene27990:intron | 30.0% | |
| AGAAAACCTGCAAAAGTAAT+AGG | - | chr4.4:11713878-11713897 | None:intergenic | 30.0% | |
| ATAATTGCTCAATTTCTCTC+AGG | + | chr4.4:11713207-11713226 | MS.gene27990:intron | 30.0% | |
| ATGACCAAAATATTACACCA+AGG | - | chr4.4:11713812-11713831 | None:intergenic | 30.0% | |
| ATTAAGAACATGTAAAGTGG+AGG | - | chr4.4:11714271-11714290 | None:intergenic | 30.0% | |
| ATTGGATCCGTGTAAAATTA+AGG | + | chr4.4:11715487-11715506 | MS.gene27990:intron | 30.0% | |
| ATTTAGTCTCTGTAATGGTA+GGG | + | chr4.4:11715522-11715541 | MS.gene27990:intron | 30.0% | |
| CACAAATTTAGTCTCTGTAA+TGG | + | chr4.4:11715517-11715536 | MS.gene27990:intron | 30.0% | |
| CACAAGGAGATCATTATATA+AGG | + | chr4.4:11713980-11713999 | MS.gene27990:CDS | 30.0% | |
| CCATTTCTATTTACCCAATT+GGG | + | chr4.4:11711271-11711290 | MS.gene27990:intron | 30.0% | |
| CTGAAATGAAAAGGACAAAA+TGG | - | chr4.4:11714316-11714335 | None:intergenic | 30.0% | |
| GAAAAAAAAAACTTTCTCCC+AGG | + | chr4.4:11715843-11715862 | MS.gene27990:intron | 30.0% | |
| GAAAACCTGCAAAAGTAATA+GGG | - | chr4.4:11713877-11713896 | None:intergenic | 30.0% | |
| GAATAAACACCTTTCTTAGT+GGG | + | chr4.4:11713489-11713508 | MS.gene27990:intron | 30.0% | |
| GATATTGAGATATCCGAATT+GGG | + | chr4.4:11711393-11711412 | MS.gene27990:intron | 30.0% | |
| GATCATAAATCAAAGATCTG+GGG | - | chr4.4:11714233-11714252 | None:intergenic | 30.0% | |
| GCTGATCTTGATTTCTTTAT+TGG | + | chr4.4:11711595-11711614 | MS.gene27990:CDS | 30.0% | |
| GTCAGTACCAAAACTTAATA+TGG | - | chr4.4:11712795-11712814 | None:intergenic | 30.0% | |
| GTGATCATCAGTTTAAGTAA+AGG | - | chr4.4:11714482-11714501 | None:intergenic | 30.0% | |
| TAATGCTAATCATGGATGAA+TGG | + | chr4.4:11712660-11712679 | MS.gene27990:intron | 30.0% | |
| TACAGAGATCAATAGCTAAT+TGG | - | chr4.4:11713737-11713756 | None:intergenic | 30.0% | |
| TAGCCAATATCACAAGAATA+TGG | - | chr4.4:11713307-11713326 | None:intergenic | 30.0% | |
| TATCAACATAATACAACAGC+CGG | - | chr4.4:11712013-11712032 | None:intergenic | 30.0% | |
| TCCATTTCTATTTACCCAAT+TGG | + | chr4.4:11711270-11711289 | MS.gene27990:intron | 30.0% | |
| TGAATAAACACCTTTCTTAG+TGG | + | chr4.4:11713488-11713507 | MS.gene27990:intron | 30.0% | |
| TGATATTGAGATATCCGAAT+TGG | + | chr4.4:11711392-11711411 | MS.gene27990:intron | 30.0% | |
| TTAAGAACATGTAAAGTGGA+GGG | - | chr4.4:11714270-11714289 | None:intergenic | 30.0% | |
| TTACAAGTTCTCGAACATTA+AGG | - | chr4.4:11714146-11714165 | None:intergenic | 30.0% | |
| TTGTAATATTACAAGCGCAT+GGG | + | chr4.4:11712219-11712238 | MS.gene27990:intron | 30.0% | |
| TTGTACAAAAGATTTACCAC+AGG | - | chr4.4:11712096-11712115 | None:intergenic | 30.0% | |
| TTTCAGAATATAGTGTTGTC+AGG | + | chr4.4:11714330-11714349 | MS.gene27990:intron | 30.0% | |
| TTTCATAAACTATGAAGCAC+TGG | - | chr4.4:11714914-11714933 | None:intergenic | 30.0% | |
| TTTGCAATAGCTAAGCTATA+TGG | + | chr4.4:11714527-11714546 | MS.gene27990:intron | 30.0% | |
| TTTGTAATATTACAAGCGCA+TGG | + | chr4.4:11712218-11712237 | MS.gene27990:intron | 30.0% | |
| ! | AATAATGGAATGGAATTGGA+TGG | + | chr4.4:11712040-11712059 | MS.gene27990:intron | 30.0% |
| ! | GAAGTTCTTCTAAAGGAAAT+TGG | + | chr4.4:11711545-11711564 | MS.gene27990:CDS | 30.0% |
| ! | GATGATAGAGAAAGTATAAC+GGG | - | chr4.4:11713365-11713384 | None:intergenic | 30.0% |
| ! | GGATGATAGAGAAAGTATAA+CGG | - | chr4.4:11713366-11713385 | None:intergenic | 30.0% |
| ! | TAAAACGGTTCTTTAGGTTT+AGG | + | chr4.4:11715225-11715244 | MS.gene27990:intron | 30.0% |
| ! | TTGGAATAATGGAATGGAAT+TGG | + | chr4.4:11712036-11712055 | MS.gene27990:intron | 30.0% |
| !! | AAATCGTTGATAACCCAAAA+AGG | - | chr4.4:11713600-11713619 | None:intergenic | 30.0% |
| !! | ATGTTTACATTGATTTGTGC+AGG | + | chr4.4:11712876-11712895 | MS.gene27990:intron | 30.0% |
| !! | CATTCCTTGGTGTAATATTT+TGG | + | chr4.4:11713805-11713824 | MS.gene27990:intron | 30.0% |
| !! | TCACTTTTATCTCTCCATTA+AGG | - | chr4.4:11714446-11714465 | None:intergenic | 30.0% |
| !! | TTGTTTTATTGTTCCTAGTG+TGG | + | chr4.4:11711489-11711508 | MS.gene27990:CDS | 30.0% |
| !!! | AATTGGATGGTTAGTTTTGA+AGG | + | chr4.4:11712053-11712072 | MS.gene27990:intron | 30.0% |
| !!! | ATTGGATGGTTAGTTTTGAA+GGG | + | chr4.4:11712054-11712073 | MS.gene27990:intron | 30.0% |
| !!! | GTGTTAGTTTTTGGTTGATT+CGG | + | chr4.4:11714636-11714655 | MS.gene27990:intron | 30.0% |
| AAAGTAATAGGGTAAACCCA+CGG | - | chr4.4:11713866-11713885 | None:intergenic | 35.0% | |
| AAGGCAGAATACGAAGAATA+TGG | + | chr4.4:11716210-11716229 | MS.gene27990:CDS | 35.0% | |
| AAGTATATCAAGCAATGGAG+AGG | + | chr4.4:11713259-11713278 | MS.gene27990:CDS | 35.0% | |
| AATGATCTCCTTGTGTCAAT+TGG | - | chr4.4:11713975-11713994 | None:intergenic | 35.0% | |
| AATTAAGGAACAGGTAGTAG+TGG | - | chr4.4:11712542-11712561 | None:intergenic | 35.0% | |
| ACAAGTCATAACCCAGAAAA+AGG | - | chr4.4:11715129-11715148 | None:intergenic | 35.0% | |
| AGGGACGTAAAGTTATCTAT+TGG | + | chr4.4:11713159-11713178 | MS.gene27990:intron | 35.0% | |
| ATCAAATCAGTTCCTATTGC+GGG | + | chr4.4:11712442-11712461 | MS.gene27990:CDS | 35.0% | |
| ATGCACTTGTCTATTACAAC+AGG | - | chr4.4:11713942-11713961 | None:intergenic | 35.0% | |
| ATGCTAATCATGGATGAATG+GGG | + | chr4.4:11712662-11712681 | MS.gene27990:intron | 35.0% | |
| CAAACCAAACTGCAAATCTT+TGG | - | chr4.4:11715050-11715069 | None:intergenic | 35.0% | |
| CAAACTGCAAATCTTTGGAT+AGG | - | chr4.4:11715045-11715064 | None:intergenic | 35.0% | |
| CAAAGATTTGCAGTTTGGTT+TGG | + | chr4.4:11715048-11715067 | MS.gene27990:CDS | 35.0% | |
| CAATCGAGAAGTTCTTCTAA+AGG | + | chr4.4:11711538-11711557 | MS.gene27990:CDS | 35.0% | |
| CAGAAGATATAATAAGGGCA+AGG | - | chr4.4:11713549-11713568 | None:intergenic | 35.0% | |
| CATCAAATCAGTTCCTATTG+CGG | + | chr4.4:11712441-11712460 | MS.gene27990:CDS | 35.0% | |
| CATGAAAATGTAGCATTCCT+TGG | + | chr4.4:11713792-11713811 | MS.gene27990:intron | 35.0% | |
| CCCAATTGGGTAAATAGAAA+TGG | - | chr4.4:11711274-11711293 | None:intergenic | 35.0% | |
| CGATTTCTAAATCCTGATAG+GGG | + | chr4.4:11713614-11713633 | MS.gene27990:intron | 35.0% | |
| CTATCCAAAGATTTGCAGTT+TGG | + | chr4.4:11715043-11715062 | MS.gene27990:CDS | 35.0% | |
| CTTGCCCTTATTATATCTTC+TGG | + | chr4.4:11713547-11713566 | MS.gene27990:intron | 35.0% | |
| GACTTATGGTATTGTTTCCT+TGG | + | chr4.4:11715450-11715469 | MS.gene27990:intron | 35.0% | |
| GATTAGCATTAACCAATGCA+TGG | - | chr4.4:11712651-11712670 | None:intergenic | 35.0% | |
| GATTTATGAAACTTGCCTAG+CGG | + | chr4.4:11711977-11711996 | MS.gene27990:intron | 35.0% | |
| GCACCTCATCTCAATTTAAT+CGG | + | chr4.4:11714007-11714026 | MS.gene27990:intron | 35.0% | |
| GCTCCATATTCTTGTGATAT+TGG | + | chr4.4:11713301-11713320 | MS.gene27990:CDS | 35.0% | |
| GGGGATTATCTGTGAAAAAA+TGG | + | chr4.4:11713509-11713528 | MS.gene27990:intron | 35.0% | |
| GGTCATTGAATCAATAGGAT+TGG | + | chr4.4:11713826-11713845 | MS.gene27990:intron | 35.0% | |
| GTTGGATAAAACGGTTCTTT+AGG | + | chr4.4:11715219-11715238 | MS.gene27990:intron | 35.0% | |
| TAATACATCCCCTTGAAAAC+AGG | - | chr4.4:11716258-11716277 | None:intergenic | 35.0% | |
| TAGATGAAGGAACAAACCTA+AGG | - | chr4.4:11713762-11713781 | None:intergenic | 35.0% | |
| TAGCTTAGCTATTGCAAACA+AGG | - | chr4.4:11714525-11714544 | None:intergenic | 35.0% | |
| TATTCATGACAGAAAATGGG+AGG | - | chr4.4:11713474-11713493 | None:intergenic | 35.0% | |
| TATTGATCTCTGTACTCCTT+AGG | + | chr4.4:11713743-11713762 | MS.gene27990:intron | 35.0% | |
| TCAACAGAGTGATTCACTTT+CGG | - | chr4.4:11712177-11712196 | None:intergenic | 35.0% | |
| TCTCAAATTATTAGCGGTGT+CGG | - | chr4.4:11714795-11714814 | None:intergenic | 35.0% | |
| TCTCCATTGCTTGATATACT+TGG | - | chr4.4:11713260-11713279 | None:intergenic | 35.0% | |
| TGTTGCAGGTATACGAAAAT+GGG | + | chr4.4:11711445-11711464 | MS.gene27990:intron | 35.0% | |
| TGTTTGTGAACTATGAAGCA+CGG | + | chr4.4:11714746-11714765 | MS.gene27990:intron | 35.0% | |
| TTGTCTATTACAACAGGCAA+AGG | - | chr4.4:11713936-11713955 | None:intergenic | 35.0% | |
| TTGTTGCAGGTATACGAAAA+TGG | + | chr4.4:11711444-11711463 | MS.gene27990:intron | 35.0% | |
| TTTGGAAGAAGTTCTCACAT+TGG | + | chr4.4:11714720-11714739 | MS.gene27990:intron | 35.0% | |
| ! | CAATGTTCAAGGATTTTCAC+AGG | + | chr4.4:11714361-11714380 | MS.gene27990:CDS | 35.0% |
| ! | GTTTGTTGAAATGCCTGAAT+GGG | + | chr4.4:11711336-11711355 | MS.gene27990:intron | 35.0% |
| ! | TCACCGATTAAATTGAGATG+AGG | - | chr4.4:11714013-11714032 | None:intergenic | 35.0% |
| ! | TGTTAACTCTCTGGTTCATA+GGG | + | chr4.4:11715945-11715964 | MS.gene27990:intron | 35.0% |
| ! | TGTTTGTTGAAATGCCTGAA+TGG | + | chr4.4:11711335-11711354 | MS.gene27990:intron | 35.0% |
| ! | TTTTCTCTGTGTTAACTCTC+TGG | + | chr4.4:11715936-11715955 | MS.gene27990:intron | 35.0% |
| !! | GCATTGGTTAATGCTAATCA+TGG | + | chr4.4:11712652-11712671 | MS.gene27990:intron | 35.0% |
| !! | GTTATGTTGGCTTAGCATAT+TGG | + | chr4.4:11712270-11712289 | MS.gene27990:intron | 35.0% |
| !! | GTTTACCCTATTACTTTTGC+AGG | + | chr4.4:11713869-11713888 | MS.gene27990:intron | 35.0% |
| !! | TCTTTTTAGTGTGAGATGAC+AGG | + | chr4.4:11712346-11712365 | MS.gene27990:intron | 35.0% |
| !! | TTTGAGACTTTTAATGTGCC+TGG | + | chr4.4:11711832-11711851 | MS.gene27990:CDS | 35.0% |
| !!! | TTAAGTTTTGGTACTGACCA+AGG | + | chr4.4:11712797-11712816 | MS.gene27990:intron | 35.0% |
| !!! | TTGGATGGTTAGTTTTGAAG+GGG | + | chr4.4:11712055-11712074 | MS.gene27990:intron | 35.0% |
| AAAATGGGCAAGTCGTAAAG+AGG | - | chr4.4:11714300-11714319 | None:intergenic | 40.0% | |
| AACCTTAACTATGTCAGAGC+AGG | - | chr4.4:11712974-11712993 | None:intergenic | 40.0% | |
| AAGTAATAGGGTAAACCCAC+GGG | - | chr4.4:11713865-11713884 | None:intergenic | 40.0% | |
| AAGTCGCTGCTATATATCTC+GGG | - | chr4.4:11713906-11713925 | None:intergenic | 40.0% | |
| ACAATGTGTCAATGGTTGAC+TGG | - | chr4.4:11714560-11714579 | None:intergenic | 40.0% | |
| ACAGAAAATGGGAGGTAATC+AGG | - | chr4.4:11713466-11713485 | None:intergenic | 40.0% | |
| ACTACTTGATCAATGATCCC+AGG | - | chr4.4:11713693-11713712 | None:intergenic | 40.0% | |
| AGAACCCTAGTTCAATTCCT+GGG | - | chr4.4:11716056-11716075 | None:intergenic | 40.0% | |
| AGGAGGATCAACAATGTTCA+AGG | + | chr4.4:11714350-11714369 | MS.gene27990:CDS | 40.0% | |
| ATAACATAACCATCCGCAAC+TGG | - | chr4.4:11712412-11712431 | None:intergenic | 40.0% | |
| ATGAAGCACGGATACATACA+CGG | + | chr4.4:11714758-11714777 | MS.gene27990:intron | 40.0% | |
| ATTGGCTATGAACGCTTTCT+TGG | + | chr4.4:11713319-11713338 | MS.gene27990:CDS | 40.0% | |
| CAAATTGTCTTGGAGTTGGA+CGG | - | chr4.4:11715623-11715642 | None:intergenic | 40.0% | |
| CACATCTCTCAGAAAGTTCT+GGG | + | chr4.4:11713390-11713409 | MS.gene27990:intron | 40.0% | |
| CAGAATATAGTGTTGTCAGG+AGG | + | chr4.4:11714333-11714352 | MS.gene27990:intron | 40.0% | |
| CAGATAATCCCCACTAAGAA+AGG | - | chr4.4:11713501-11713520 | None:intergenic | 40.0% | |
| CAGCCAAGTATATCAAGCAA+TGG | + | chr4.4:11713254-11713273 | MS.gene27990:CDS | 40.0% | |
| CAGGCATTTCAACAAACACA+TGG | - | chr4.4:11711333-11711352 | None:intergenic | 40.0% | |
| CATAAATCAAAGATCTGGGG+TGG | - | chr4.4:11714230-11714249 | None:intergenic | 40.0% | |
| CATGAGACAGTTCATGAATC+TGG | - | chr4.4:11712859-11712878 | None:intergenic | 40.0% | |
| CATTGCTTGATATACTTGGC+TGG | - | chr4.4:11713256-11713275 | None:intergenic | 40.0% | |
| CCAACTCCAAGACAATTTGA+AGG | + | chr4.4:11715624-11715643 | MS.gene27990:intron | 40.0% | |
| CCAATAAACATATAGCTGCG+AGG | - | chr4.4:11714939-11714958 | None:intergenic | 40.0% | |
| CCTCGCAGCTATATGTTTAT+TGG | + | chr4.4:11714936-11714955 | MS.gene27990:intron | 40.0% | |
| CCTTCAAATTGTCTTGGAGT+TGG | - | chr4.4:11715627-11715646 | None:intergenic | 40.0% | |
| CCTTGAAAACAGGATTTGTG+CGG | - | chr4.4:11716248-11716267 | None:intergenic | 40.0% | |
| CTGCAAATCTTTGGATAGGA+TGG | - | chr4.4:11715041-11715060 | None:intergenic | 40.0% | |
| CTTCCAAACATGTGTACATG+TGG | - | chr4.4:11714708-11714727 | None:intergenic | 40.0% | |
| GAAGTCGCTGCTATATATCT+CGG | - | chr4.4:11713907-11713926 | None:intergenic | 40.0% | |
| GATGGAAACAACCAAGTGAT+GGG | - | chr4.4:11716124-11716143 | None:intergenic | 40.0% | |
| GGTGATTTAAAGATTCCCGT+GGG | + | chr4.4:11713847-11713866 | MS.gene27990:intron | 40.0% | |
| GTTGCGGATGGTTATGTTAT+TGG | + | chr4.4:11712412-11712431 | MS.gene27990:CDS | 40.0% | |
| TACACATGTTGTACCAGTTG+CGG | + | chr4.4:11712396-11712415 | MS.gene27990:CDS | 40.0% | |
| TATTACAACAGGCAAAGGAG+TGG | - | chr4.4:11713931-11713950 | None:intergenic | 40.0% | |
| TCAACCTGACCATGCTTAAT+CGG | - | chr4.4:11711673-11711692 | None:intergenic | 40.0% | |
| TCACTCTGTTGAGTAAGAAC+TGG | + | chr4.4:11712185-11712204 | MS.gene27990:intron | 40.0% | |
| TCTAAATCCTGATAGGGGAT+GGG | + | chr4.4:11713619-11713638 | MS.gene27990:intron | 40.0% | |
| TGGTGATTTAAAGATTCCCG+TGG | + | chr4.4:11713846-11713865 | MS.gene27990:intron | 40.0% | |
| TGTTGAGTAAGAACTGGTTG+CGG | + | chr4.4:11712191-11712210 | MS.gene27990:intron | 40.0% | |
| TTCTAAATCCTGATAGGGGA+TGG | + | chr4.4:11713618-11713637 | MS.gene27990:intron | 40.0% | |
| TTGGGATCATCAAGTCTCTT+AGG | - | chr4.4:11713718-11713737 | None:intergenic | 40.0% | |
| TTGTCATGCAATCCATTCAC+CGG | - | chr4.4:11715308-11715327 | None:intergenic | 40.0% | |
| ! | ACAGGAGTCGTAGTTGATAT+CGG | + | chr4.4:11712364-11712383 | MS.gene27990:CDS | 40.0% |
| ! | ACTTTCTGAGAGATGTGCTA+TGG | - | chr4.4:11713387-11713406 | None:intergenic | 40.0% |
| ! | CGAAGTGCATTTTCTGTTGT+TGG | + | chr4.4:11714180-11714199 | MS.gene27990:intron | 40.0% |
| ! | CGCACAAATCCTGTTTTCAA+GGG | + | chr4.4:11716246-11716265 | MS.gene27990:CDS | 40.0% |
| ! | GAAAGTGTGAAACCATGCAT+TGG | + | chr4.4:11712636-11712655 | MS.gene27990:intron | 40.0% |
| ! | GTGTTAACTCTCTGGTTCAT+AGG | + | chr4.4:11715944-11715963 | MS.gene27990:intron | 40.0% |
| ! | GTTAACTCTCTGGTTCATAG+GGG | + | chr4.4:11715946-11715965 | MS.gene27990:intron | 40.0% |
| ! | TATACGAAAATGGGCTTTGC+TGG | + | chr4.4:11711454-11711473 | MS.gene27990:CDS | 40.0% |
| ! | TCGTAGTTGATATCGGAGAT+GGG | + | chr4.4:11712371-11712390 | MS.gene27990:CDS | 40.0% |
| !! | AGATTTGCAGTTTGGTTTGG+TGG | + | chr4.4:11715051-11715070 | MS.gene27990:CDS | 40.0% |
| !! | CATTGATTTGTGCAGGAAAG+AGG | + | chr4.4:11712883-11712902 | MS.gene27990:intron | 40.0% |
| !! | GCACAAATCCTGTTTTCAAG+GGG | + | chr4.4:11716247-11716266 | MS.gene27990:CDS | 40.0% |
| AACTATGGACTCTGTCTTCC+TGG | - | chr4.4:11715864-11715883 | None:intergenic | 45.0% | |
| ACTATGGACTCTGTCTTCCT+GGG | - | chr4.4:11715863-11715882 | None:intergenic | 45.0% | |
| AGCCGAACTCCAGATTACTA+GGG | - | chr4.4:11715979-11715998 | None:intergenic | 45.0% | |
| AGGCGTTAAACCAAAGACTG+GGG | + | chr4.4:11713279-11713298 | MS.gene27990:CDS | 45.0% | |
| ATCAGTTCCTATTGCGGGAA+AGG | + | chr4.4:11712447-11712466 | MS.gene27990:CDS | 45.0% | |
| CAACCTGACCATGCTTAATC+GGG | - | chr4.4:11711672-11711691 | None:intergenic | 45.0% | |
| CACCTGCTCTGACATAGTTA+AGG | + | chr4.4:11712969-11712988 | MS.gene27990:CDS | 45.0% | |
| CCAAACATGTGTACATGTGG+AGG | - | chr4.4:11714705-11714724 | None:intergenic | 45.0% | |
| CCTCCACATGTACACATGTT+TGG | + | chr4.4:11714702-11714721 | MS.gene27990:intron | 45.0% | |
| CTCACTTACCCGATTAAGCA+TGG | + | chr4.4:11711661-11711680 | MS.gene27990:CDS | 45.0% | |
| CTGAGAGTCGTGAGTATACT+GGG | + | chr4.4:11711800-11711819 | MS.gene27990:CDS | 45.0% | |
| GAGAACCCTAGTTCAATTCC+TGG | - | chr4.4:11716057-11716076 | None:intergenic | 45.0% | |
| GAGAGCAAGCACAGAATTCA+CGG | - | chr4.4:11711869-11711888 | None:intergenic | 45.0% | |
| GATTGCTCAGCATAATGCTG+GGG | + | chr4.4:11711567-11711586 | MS.gene27990:CDS | 45.0% | |
| GCACATCTCTCAGAAAGTTC+TGG | + | chr4.4:11713389-11713408 | MS.gene27990:intron | 45.0% | |
| GGATGGAAACAACCAAGTGA+TGG | - | chr4.4:11716125-11716144 | None:intergenic | 45.0% | |
| GGATTGCTCAGCATAATGCT+GGG | + | chr4.4:11711566-11711585 | MS.gene27990:CDS | 45.0% | |
| GGTTAATGAGCTCCACCAAT+GGG | - | chr4.4:11716094-11716113 | None:intergenic | 45.0% | |
| GTAACATCCTTTCCCGCAAT+AGG | - | chr4.4:11712457-11712476 | None:intergenic | 45.0% | |
| TAGATTATGTCTTGCTCCCG+AGG | + | chr4.4:11715277-11715296 | MS.gene27990:intron | 45.0% | |
| TCAGCATAATGCTGGGGTTA+TGG | + | chr4.4:11711573-11711592 | MS.gene27990:CDS | 45.0% | |
| TCCACCCAGGAATTGAACTA+GGG | + | chr4.4:11716049-11716068 | MS.gene27990:intron | 45.0% | |
| TCGTTAATCGCAACCACACT+AGG | - | chr4.4:11711505-11711524 | None:intergenic | 45.0% | |
| TGAGAGTCGTGAGTATACTG+GGG | + | chr4.4:11711801-11711820 | MS.gene27990:CDS | 45.0% | |
| TGGATTGCTCAGCATAATGC+TGG | + | chr4.4:11711565-11711584 | MS.gene27990:CDS | 45.0% | |
| TGGTTAATGAGCTCCACCAA+TGG | - | chr4.4:11716095-11716114 | None:intergenic | 45.0% | |
| TGTGCAGGCTTGTCATACAA+AGG | + | chr4.4:11716191-11716210 | MS.gene27990:intron | 45.0% | |
| TTACCCGATTAAGCATGGTC+AGG | + | chr4.4:11711666-11711685 | MS.gene27990:CDS | 45.0% | |
| TTATTTGCGGTGTGATCCTG+AGG | + | chr4.4:11711738-11711757 | MS.gene27990:CDS | 45.0% | |
| TTCACGGCAATGTAAAGTCC+AGG | - | chr4.4:11711853-11711872 | None:intergenic | 45.0% | |
| TTCCACCCAGGAATTGAACT+AGG | + | chr4.4:11716048-11716067 | MS.gene27990:intron | 45.0% | |
| ! | ATTTTCTGTTGTTGGCCCAG+AGG | + | chr4.4:11714188-11714207 | MS.gene27990:intron | 45.0% |
| ! | CCGCACAAATCCTGTTTTCA+AGG | + | chr4.4:11716245-11716264 | MS.gene27990:CDS | 45.0% |
| ! | CGTAGTTGATATCGGAGATG+GGG | + | chr4.4:11712372-11712391 | MS.gene27990:CDS | 45.0% |
| ! | GAGGCGTTAAACCAAAGACT+GGG | + | chr4.4:11713278-11713297 | MS.gene27990:CDS | 45.0% |
| ! | GTCGTAGTTGATATCGGAGA+TGG | + | chr4.4:11712370-11712389 | MS.gene27990:CDS | 45.0% |
| ! | TCTCTGGTTCATAGGGGAAA+GGG | + | chr4.4:11715952-11715971 | MS.gene27990:intron | 45.0% |
| ! | TGGTTGTTTCCATCCGTTCT+TGG | + | chr4.4:11716130-11716149 | MS.gene27990:intron | 45.0% |
| ! | TTTTCGTCCAGCAGCTAATG+CGG | + | chr4.4:11712479-11712498 | MS.gene27990:CDS | 45.0% |
| !! | AGAGGCGTTAAACCAAAGAC+TGG | + | chr4.4:11713277-11713296 | MS.gene27990:CDS | 45.0% |
| !! | AGCATGGTCAGGTTGAGAAT+TGG | + | chr4.4:11711677-11711696 | MS.gene27990:CDS | 45.0% |
| !! | ATGGAGTGAGAAAAGGTACC+CGG | - | chr4.4:11711255-11711274 | None:intergenic | 45.0% |
| !! | CATTAGCTCTGCACCAAGAA+CGG | - | chr4.4:11716146-11716165 | None:intergenic | 45.0% |
| !! | GCATGGTCAGGTTGAGAATT+GGG | + | chr4.4:11711678-11711697 | MS.gene27990:CDS | 45.0% |
| !! | TATATGTGTCGGTGTCGTGT+CGG | + | chr4.4:11714837-11714856 | MS.gene27990:intron | 45.0% |
| !! | AAAATAAAAAAAGAAAAAAA+AGG | - | chr4.4:11715917-11715936 | None:intergenic | 5.0% |
| !!! | TATTTTTTAGTTTTTTTTAT+TGG | + | chr4.4:11711360-11711379 | MS.gene27990:intron | 5.0% |
| AACCACTTGAGCCCATCACT+TGG | + | chr4.4:11716110-11716129 | MS.gene27990:intron | 50.0% | |
| AAGACTCGTTCGAAGTGGCT+CGG | + | chr4.4:11712923-11712942 | MS.gene27990:CDS | 50.0% | |
| AAGTGCAGGCAATGCACATC+CGG | + | chr4.4:11713654-11713673 | MS.gene27990:intron | 50.0% | |
| ACCAGAAGACTCGTTCGAAG+TGG | + | chr4.4:11712918-11712937 | MS.gene27990:CDS | 50.0% | |
| ACCCTAGTTCAATTCCTGGG+TGG | - | chr4.4:11716053-11716072 | None:intergenic | 50.0% | |
| ACTTCGAACGAGTCTTCTGG+TGG | - | chr4.4:11712919-11712938 | None:intergenic | 50.0% | |
| AGTCTGCGCCAATTGACACA+AGG | + | chr4.4:11713964-11713983 | MS.gene27990:CDS | 50.0% | |
| ATCCTGATAGGGGATGGGAA+AGG | + | chr4.4:11713624-11713643 | MS.gene27990:intron | 50.0% | |
| CAGCCGAACTCCAGATTACT+AGG | - | chr4.4:11715980-11715999 | None:intergenic | 50.0% | |
| CATGTTGTACCAGTTGCGGA+TGG | + | chr4.4:11712400-11712419 | MS.gene27990:CDS | 50.0% | |
| CCAGTATACTCACGACTCTC+AGG | - | chr4.4:11711802-11711821 | None:intergenic | 50.0% | |
| CCATTGTCGATGACAACAGC+AGG | - | chr4.4:11711230-11711249 | None:intergenic | 50.0% | |
| CCTGAGAGTCGTGAGTATAC+TGG | + | chr4.4:11711799-11711818 | MS.gene27990:CDS | 50.0% | |
| CCTGCTGTTGTCATCGACAA+TGG | + | chr4.4:11711227-11711246 | MS.gene27990:CDS | 50.0% | |
| CTGAGTACATTGACCTCGAC+TGG | - | chr4.4:11715018-11715037 | None:intergenic | 50.0% | |
| CTTCCGACTGATAAGCCTCT+GGG | - | chr4.4:11714206-11714225 | None:intergenic | 50.0% | |
| GAATATGGAGCCCCAGTCTT+TGG | - | chr4.4:11713292-11713311 | None:intergenic | 50.0% | |
| GCTGTGTGGTAAGTAAAGCC+TGG | + | chr4.4:11715996-11716015 | MS.gene27990:intron | 50.0% | |
| GGAAAGGGATGCTTAAGTGC+AGG | + | chr4.4:11713640-11713659 | MS.gene27990:intron | 50.0% | |
| GGGCCAAAGAACAAACCTCA+GGG | - | chr4.4:11713345-11713364 | None:intergenic | 50.0% | |
| GGTTGAGAATTGGGATGCCA+TGG | + | chr4.4:11711687-11711706 | MS.gene27990:CDS | 50.0% | |
| GTTGTCATCGACAATGGCTC+CGG | + | chr4.4:11711233-11711252 | MS.gene27990:CDS | 50.0% | |
| TCCTGATAGGGGATGGGAAA+GGG | + | chr4.4:11713625-11713644 | MS.gene27990:intron | 50.0% | |
| TCTTCCGACTGATAAGCCTC+TGG | - | chr4.4:11714207-11714226 | None:intergenic | 50.0% | |
| TGAGTAAGAACTGGTTGCGG+TGG | + | chr4.4:11712194-11712213 | MS.gene27990:intron | 50.0% | |
| TGGATTGCATGACAATGCCC+TGG | + | chr4.4:11715313-11715332 | MS.gene27990:intron | 50.0% | |
| TGGGTGGAACAGTTCTTCCT+GGG | - | chr4.4:11716037-11716056 | None:intergenic | 50.0% | |
| TTCCTGGGTGGAACAGTTCT+TGG | - | chr4.4:11716022-11716041 | None:intergenic | 50.0% | |
| TTGTCATCGACAATGGCTCC+GGG | + | chr4.4:11711234-11711253 | MS.gene27990:CDS | 50.0% | |
| TTTCGTCCAGCAGCTAATGC+GGG | + | chr4.4:11712480-11712499 | MS.gene27990:CDS | 50.0% | |
| ! | CTCTCTGGTTCATAGGGGAA+AGG | + | chr4.4:11715951-11715970 | MS.gene27990:intron | 50.0% |
| ! | CTCTGGTTCATAGGGGAAAG+GGG | + | chr4.4:11715953-11715972 | MS.gene27990:intron | 50.0% |
| ! | GGCCCTAGTAATCTGGAGTT+CGG | + | chr4.4:11715974-11715993 | MS.gene27990:intron | 50.0% |
| ! | TAATCTGGAGTTCGGCTGTG+TGG | + | chr4.4:11715982-11716001 | MS.gene27990:intron | 50.0% |
| ! | TGCTGGCTACACTACGTCTA+AGG | + | chr4.4:11711891-11711910 | MS.gene27990:CDS | 50.0% |
| ! | TGGCCCTGAGGTTTGTTCTT+TGG | + | chr4.4:11713339-11713358 | MS.gene27990:intron | 50.0% |
| !! | AACCAAGTGATGGGCTCAAG+TGG | - | chr4.4:11716115-11716134 | None:intergenic | 50.0% |
| !! | ATTTCTGGCTCGCAATGTGC+AGG | + | chr4.4:11716176-11716195 | MS.gene27990:intron | 50.0% |
| !! | TATGAAGCACTGGCACTCCT+CGG | - | chr4.4:11714904-11714923 | None:intergenic | 50.0% |
| ACCAGGACACGTCTAATCCG+AGG | + | chr4.4:11714884-11714903 | MS.gene27990:intron | 55.0% | |
| ACCTCGACTGGATGTGACTG+TGG | - | chr4.4:11715006-11715025 | None:intergenic | 55.0% | |
| AGCTCTGCACCAAGAACGGA+TGG | - | chr4.4:11716142-11716161 | None:intergenic | 55.0% | |
| AGGCAATGCACATCCGGGTT+GGG | + | chr4.4:11713660-11713679 | MS.gene27990:intron | 55.0% | |
| AGTGCAGGCAATGCACATCC+GGG | + | chr4.4:11713655-11713674 | MS.gene27990:intron | 55.0% | |
| CAGGAAGAACTGTTCCACCC+AGG | + | chr4.4:11716036-11716055 | MS.gene27990:intron | 55.0% | |
| CGGGCCAAAGAACAAACCTC+AGG | - | chr4.4:11713346-11713365 | None:intergenic | 55.0% | |
| CTCTCGAACGATTCGCCCAT+TGG | + | chr4.4:11716076-11716095 | MS.gene27990:intron | 55.0% | |
| CTGCTGCCAAAATCGCTCCA+TGG | - | chr4.4:11711707-11711726 | None:intergenic | 55.0% | |
| CTGGGTGGAACAGTTCTTCC+TGG | - | chr4.4:11716038-11716057 | None:intergenic | 55.0% | |
| GCCACTTCGAACGAGTCTTC+TGG | - | chr4.4:11712922-11712941 | None:intergenic | 55.0% | |
| GGAAAGGGGCCCTAGTAATC+TGG | + | chr4.4:11715967-11715986 | MS.gene27990:intron | 55.0% | |
| GTGGAACAGTTCTTCCTGGG+TGG | - | chr4.4:11716034-11716053 | None:intergenic | 55.0% | |
| TACCTACCCGCATTAGCTGC+TGG | - | chr4.4:11712489-11712508 | None:intergenic | 55.0% | |
| TCCACAGTCACATCCAGTCG+AGG | + | chr4.4:11715002-11715021 | MS.gene27990:intron | 55.0% | |
| TCCATTCACCGGTGCTTCCT+CGG | - | chr4.4:11715297-11715316 | None:intergenic | 55.0% | |
| TCCCTTTCCCATCCCCTATC+AGG | - | chr4.4:11713629-11713648 | None:intergenic | 55.0% | |
| TCGAACGATTCGCCCATTGG+TGG | + | chr4.4:11716079-11716098 | MS.gene27990:intron | 55.0% | |
| TGAACGCTTTCTTGGCCCTG+AGG | + | chr4.4:11713327-11713346 | MS.gene27990:CDS | 55.0% | |
| TGGCCCAGAGGCTTATCAGT+CGG | + | chr4.4:11714200-11714219 | MS.gene27990:intron | 55.0% | |
| ! | ATGCACATCCGGGTTGGGAT+TGG | + | chr4.4:11713665-11713684 | MS.gene27990:intron | 55.0% |
| ! | CGAAGTGGCTCGGAAAGTGA+AGG | + | chr4.4:11712933-11712952 | MS.gene27990:CDS | 55.0% |
| ! | GGGATGCCATGGAGCGATTT+TGG | + | chr4.4:11711698-11711717 | MS.gene27990:CDS | 55.0% |
| ! | TCCTCGGATTAGACGTGTCC+TGG | - | chr4.4:11714888-11714907 | None:intergenic | 55.0% |
| ACAGCAGGACGAGAAGCAGC+TGG | - | chr4.4:11711215-11711234 | None:intergenic | 60.0% | |
| CACGACACGTGTCTGACACC+AGG | + | chr4.4:11714867-11714886 | MS.gene27990:intron | 60.0% | |
| CAGCAGGACGAGAAGCAGCT+GGG | - | chr4.4:11711214-11711233 | None:intergenic | 60.0% | |
| CAGGCAATGCACATCCGGGT+TGG | + | chr4.4:11713659-11713678 | MS.gene27990:intron | 60.0% | |
| CCATTCACCGGTGCTTCCTC+GGG | - | chr4.4:11715296-11715315 | None:intergenic | 60.0% | |
| CCCAGGTTCCAATCCCAACC+CGG | - | chr4.4:11713676-11713695 | None:intergenic | 60.0% | |
| CGCTTCAGCTGCAAGGACAC+GGG | - | chr4.4:11714421-11714440 | None:intergenic | 60.0% | |
| GCAGCTGAAGCGCGCCTTAA+TGG | + | chr4.4:11714429-11714448 | MS.gene27990:CDS | 60.0% | |
| GCCTAGCGGAAAGATGCTGC+CGG | + | chr4.4:11711991-11712010 | MS.gene27990:intron | 60.0% | |
| GCGCTTCAGCTGCAAGGACA+CGG | - | chr4.4:11714422-11714441 | None:intergenic | 60.0% | |
| GGCCAAGAACTGTTCCACCC+AGG | + | chr4.4:11716017-11716036 | MS.gene27990:intron | 60.0% | |
| GGGTGGAACAGTTCTTGGCC+AGG | - | chr4.4:11716017-11716036 | None:intergenic | 60.0% | |
| GTCCAGCAGCTAATGCGGGT+AGG | + | chr4.4:11712484-11712503 | MS.gene27990:intron | 60.0% | |
| TAAGGCGCGCTTCAGCTGCA+AGG | - | chr4.4:11714428-11714447 | None:intergenic | 60.0% | |
| TCTGTGCTTGCTCTCGCTGC+TGG | + | chr4.4:11711874-11711893 | MS.gene27990:CDS | 60.0% | |
| ! | AGGCGCTGTCAACGGACTCT+CGG | - | chr4.4:11711782-11711801 | None:intergenic | 60.0% |
| ! | CCGGGTTGGGATTGGAACCT+GGG | + | chr4.4:11713673-11713692 | MS.gene27990:intron | 60.0% |
| ! | CGACTCTCAGGCGCTGTCAA+CGG | - | chr4.4:11711790-11711809 | None:intergenic | 60.0% |
| ! | TCCGGGTTGGGATTGGAACC+TGG | + | chr4.4:11713672-11713691 | MS.gene27990:intron | 60.0% |
| ! | TCTTGCTCCCGAGGAAGCAC+CGG | + | chr4.4:11715286-11715305 | MS.gene27990:intron | 60.0% |
| !! | TGTCGGTGTCGTGTCGGAGT+GGG | + | chr4.4:11714843-11714862 | MS.gene27990:intron | 60.0% |
| GCCGGCAGCATCTTTCCGCT+AGG | - | chr4.4:11711995-11712014 | None:intergenic | 65.0% | |
| !! | CCCGAGGAAGCACCGGTGAA+TGG | + | chr4.4:11715293-11715312 | MS.gene27990:intron | 65.0% |
| !! | GTGTCGGTGTCGTGTCGGAG+TGG | + | chr4.4:11714842-11714861 | MS.gene27990:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 11711206 | 11716278 | 11711206 | ID=MS.gene27990 |
| chr4.4 | mRNA | 11711206 | 11716278 | 11711206 | ID=MS.gene27990.t1;Parent=MS.gene27990 |
| chr4.4 | exon | 11711206 | 11711255 | 11711206 | ID=MS.gene27990.t1.exon1;Parent=MS.gene27990.t1 |
| chr4.4 | CDS | 11711206 | 11711255 | 11711206 | ID=cds.MS.gene27990.t1;Parent=MS.gene27990.t1 |
| chr4.4 | exon | 11711453 | 11711912 | 11711453 | ID=MS.gene27990.t1.exon2;Parent=MS.gene27990.t1 |
| chr4.4 | CDS | 11711453 | 11711912 | 11711453 | ID=cds.MS.gene27990.t1;Parent=MS.gene27990.t1 |
| chr4.4 | exon | 11712355 | 11712501 | 11712355 | ID=MS.gene27990.t1.exon3;Parent=MS.gene27990.t1 |
| chr4.4 | CDS | 11712355 | 11712501 | 11712355 | ID=cds.MS.gene27990.t1;Parent=MS.gene27990.t1 |
| chr4.4 | exon | 11712898 | 11712990 | 11712898 | ID=MS.gene27990.t1.exon4;Parent=MS.gene27990.t1 |
| chr4.4 | CDS | 11712898 | 11712990 | 11712898 | ID=cds.MS.gene27990.t1;Parent=MS.gene27990.t1 |
| chr4.4 | exon | 11713229 | 11713348 | 11713229 | ID=MS.gene27990.t1.exon5;Parent=MS.gene27990.t1 |
| chr4.4 | CDS | 11713229 | 11713348 | 11713229 | ID=cds.MS.gene27990.t1;Parent=MS.gene27990.t1 |
| chr4.4 | exon | 11713891 | 11714001 | 11713891 | ID=MS.gene27990.t1.exon6;Parent=MS.gene27990.t1 |
| chr4.4 | CDS | 11713891 | 11714001 | 11713891 | ID=cds.MS.gene27990.t1;Parent=MS.gene27990.t1 |
| chr4.4 | exon | 11714336 | 11714461 | 11714336 | ID=MS.gene27990.t1.exon7;Parent=MS.gene27990.t1 |
| chr4.4 | CDS | 11714336 | 11714461 | 11714336 | ID=cds.MS.gene27990.t1;Parent=MS.gene27990.t1 |
| chr4.4 | exon | 11715009 | 11715107 | 11715009 | ID=MS.gene27990.t1.exon8;Parent=MS.gene27990.t1 |
| chr4.4 | CDS | 11715009 | 11715107 | 11715009 | ID=cds.MS.gene27990.t1;Parent=MS.gene27990.t1 |
| chr4.4 | exon | 11716198 | 11716278 | 11716198 | ID=MS.gene27990.t1.exon9;Parent=MS.gene27990.t1 |
| chr4.4 | CDS | 11716198 | 11716278 | 11716198 | ID=cds.MS.gene27990.t1;Parent=MS.gene27990.t1 |
| Gene Sequence |
| Protein sequence |
