Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28072.t1 | XP_013446808.1 | 100 | 157 | 0 | 0 | 1 | 157 | 51 | 207 | 6.00E-81 | 310.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28072.t1 | Q9SID8 | 84.7 | 157 | 24 | 0 | 1 | 157 | 51 | 207 | 1.7e-71 | 270.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28072.t1 | A0A072U4T2 | 100.0 | 157 | 0 | 0 | 1 | 157 | 51 | 207 | 4.3e-81 | 310.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050173 | MS.gene28072 | 0.810586 | 1.07E-50 | -1.69E-46 |
MS.gene050333 | MS.gene28072 | -0.806299 | 8.80E-50 | -1.69E-46 |
MS.gene050416 | MS.gene28072 | 0.840451 | 8.63E-58 | -1.69E-46 |
MS.gene053561 | MS.gene28072 | 0.822965 | 1.79E-53 | -1.69E-46 |
MS.gene054616 | MS.gene28072 | 0.80118 | 1.02E-48 | -1.69E-46 |
MS.gene055333 | MS.gene28072 | 0.857276 | 1.82E-62 | -1.69E-46 |
MS.gene055634 | MS.gene28072 | -0.836245 | 1.05E-56 | -1.69E-46 |
MS.gene055638 | MS.gene28072 | -0.801437 | 9.01E-49 | -1.69E-46 |
MS.gene059022 | MS.gene28072 | -0.80135 | 9.39E-49 | -1.69E-46 |
MS.gene059026 | MS.gene28072 | -0.810061 | 1.39E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28072.t1 | MTR_8g090215 | 100.000 | 157 | 0 | 0 | 1 | 157 | 51 | 207 | 4.91e-116 | 327 |
MS.gene28072.t1 | MTR_3g087160 | 92.357 | 157 | 11 | 1 | 1 | 157 | 51 | 206 | 1.42e-104 | 298 |
MS.gene28072.t1 | MTR_5g013900 | 80.892 | 157 | 30 | 0 | 1 | 157 | 51 | 207 | 2.70e-94 | 271 |
MS.gene28072.t1 | MTR_4g098950 | 81.529 | 157 | 28 | 1 | 1 | 157 | 51 | 206 | 7.47e-94 | 270 |
MS.gene28072.t1 | MTR_5g076590 | 43.802 | 121 | 68 | 0 | 1 | 121 | 52 | 172 | 3.55e-36 | 124 |
MS.gene28072.t1 | MTR_8g031870 | 49.153 | 118 | 60 | 0 | 3 | 120 | 50 | 167 | 3.28e-35 | 121 |
MS.gene28072.t1 | MTR_8g031680 | 47.458 | 118 | 62 | 0 | 3 | 120 | 50 | 167 | 5.57e-35 | 121 |
MS.gene28072.t1 | MTR_1g094220 | 47.826 | 115 | 60 | 0 | 7 | 121 | 80 | 194 | 6.28e-35 | 120 |
MS.gene28072.t1 | MTR_3g064390 | 42.975 | 121 | 69 | 0 | 1 | 121 | 52 | 172 | 6.59e-35 | 120 |
MS.gene28072.t1 | MTR_8g103550 | 46.218 | 119 | 64 | 0 | 3 | 121 | 53 | 171 | 4.94e-34 | 118 |
MS.gene28072.t1 | MTR_8g031660 | 46.610 | 118 | 63 | 0 | 3 | 120 | 50 | 167 | 1.46e-33 | 117 |
MS.gene28072.t1 | MTR_1g094220 | 47.273 | 110 | 58 | 0 | 7 | 116 | 80 | 189 | 1.10e-32 | 115 |
MS.gene28072.t1 | MTR_2g027660 | 42.373 | 118 | 68 | 0 | 3 | 120 | 50 | 167 | 1.18e-32 | 115 |
MS.gene28072.t1 | MTR_6g021790 | 42.500 | 120 | 69 | 0 | 1 | 120 | 48 | 167 | 3.67e-32 | 114 |
MS.gene28072.t1 | MTR_8g031830 | 50.476 | 105 | 52 | 0 | 8 | 112 | 55 | 159 | 5.85e-32 | 113 |
MS.gene28072.t1 | MTR_1g094220 | 47.664 | 107 | 56 | 0 | 7 | 113 | 80 | 186 | 6.36e-32 | 113 |
MS.gene28072.t1 | MTR_2g102060 | 41.463 | 123 | 68 | 1 | 3 | 121 | 54 | 176 | 1.49e-31 | 112 |
MS.gene28072.t1 | MTR_1g094220 | 47.664 | 107 | 56 | 0 | 7 | 113 | 80 | 186 | 1.50e-31 | 113 |
MS.gene28072.t1 | MTR_4g064897 | 35.758 | 165 | 93 | 3 | 1 | 156 | 54 | 214 | 3.35e-31 | 112 |
MS.gene28072.t1 | MTR_7g081700 | 38.312 | 154 | 85 | 2 | 6 | 156 | 55 | 201 | 3.15e-30 | 108 |
MS.gene28072.t1 | MTR_4g099470 | 37.086 | 151 | 91 | 1 | 6 | 156 | 31 | 177 | 6.69e-30 | 107 |
MS.gene28072.t1 | MTR_2g005500 | 37.162 | 148 | 90 | 1 | 3 | 147 | 53 | 200 | 5.24e-29 | 105 |
MS.gene28072.t1 | MTR_1g115325 | 36.538 | 156 | 95 | 3 | 3 | 155 | 59 | 213 | 1.11e-28 | 105 |
MS.gene28072.t1 | MTR_8g006970 | 36.943 | 157 | 88 | 3 | 4 | 156 | 67 | 216 | 1.15e-28 | 105 |
MS.gene28072.t1 | MTR_8g027220 | 43.243 | 111 | 63 | 0 | 6 | 116 | 73 | 183 | 1.56e-28 | 105 |
MS.gene28072.t1 | MTR_2g005510 | 40.351 | 114 | 68 | 0 | 1 | 114 | 57 | 170 | 1.80e-28 | 105 |
MS.gene28072.t1 | MTR_8g006970 | 42.609 | 115 | 66 | 0 | 6 | 120 | 55 | 169 | 1.93e-28 | 103 |
MS.gene28072.t1 | MTR_8g036220 | 37.288 | 118 | 74 | 0 | 3 | 120 | 60 | 177 | 2.52e-28 | 104 |
MS.gene28072.t1 | MTR_3g069510 | 33.742 | 163 | 96 | 2 | 3 | 156 | 56 | 215 | 2.89e-28 | 104 |
MS.gene28072.t1 | MTR_1g068740 | 43.103 | 116 | 65 | 1 | 3 | 117 | 59 | 174 | 3.19e-28 | 104 |
MS.gene28072.t1 | MTR_6g079550 | 39.655 | 116 | 70 | 0 | 5 | 120 | 58 | 173 | 3.51e-28 | 103 |
MS.gene28072.t1 | MTR_3g086980 | 33.121 | 157 | 89 | 2 | 1 | 157 | 58 | 198 | 4.35e-28 | 103 |
MS.gene28072.t1 | MTR_1g068730 | 43.103 | 116 | 65 | 1 | 3 | 117 | 59 | 174 | 4.95e-28 | 103 |
MS.gene28072.t1 | MTR_7g100020 | 43.103 | 116 | 65 | 1 | 3 | 117 | 59 | 174 | 5.11e-28 | 103 |
MS.gene28072.t1 | MTR_8g089985 | 37.931 | 116 | 72 | 0 | 1 | 116 | 59 | 174 | 8.95e-28 | 103 |
MS.gene28072.t1 | MTR_7g405790 | 35.625 | 160 | 98 | 2 | 3 | 157 | 59 | 218 | 9.89e-28 | 103 |
MS.gene28072.t1 | MTR_7g051940 | 35.849 | 159 | 97 | 2 | 3 | 157 | 57 | 214 | 3.02e-27 | 101 |
MS.gene28072.t1 | MTR_1g062760 | 39.355 | 155 | 85 | 4 | 6 | 155 | 60 | 210 | 3.72e-27 | 101 |
MS.gene28072.t1 | MTR_0262s0050 | 32.237 | 152 | 89 | 1 | 1 | 152 | 57 | 194 | 9.38e-27 | 100 |
MS.gene28072.t1 | MTR_4g088090 | 37.069 | 116 | 73 | 0 | 1 | 116 | 55 | 170 | 1.33e-26 | 100 |
MS.gene28072.t1 | MTR_1g052475 | 30.723 | 166 | 104 | 1 | 1 | 155 | 57 | 222 | 1.38e-26 | 100 |
MS.gene28072.t1 | MTR_1g078200 | 38.793 | 116 | 71 | 0 | 1 | 116 | 56 | 171 | 2.21e-26 | 99.8 |
MS.gene28072.t1 | MTR_1g090717 | 39.610 | 154 | 88 | 4 | 5 | 156 | 62 | 212 | 3.77e-26 | 98.6 |
MS.gene28072.t1 | MTR_2g096550 | 41.026 | 117 | 67 | 2 | 3 | 117 | 59 | 175 | 7.24e-26 | 98.2 |
MS.gene28072.t1 | MTR_4g079350 | 37.069 | 116 | 73 | 0 | 1 | 116 | 55 | 170 | 8.27e-26 | 98.2 |
MS.gene28072.t1 | MTR_2g014990 | 37.719 | 114 | 71 | 0 | 3 | 116 | 57 | 170 | 9.10e-26 | 97.8 |
MS.gene28072.t1 | MTR_7g103070 | 36.306 | 157 | 89 | 4 | 6 | 156 | 7 | 158 | 1.55e-25 | 95.9 |
MS.gene28072.t1 | MTR_2g075950 | 35.965 | 114 | 73 | 0 | 3 | 116 | 57 | 170 | 1.73e-25 | 97.1 |
MS.gene28072.t1 | MTR_4g063160 | 35.220 | 159 | 95 | 4 | 3 | 155 | 59 | 215 | 2.33e-25 | 96.7 |
MS.gene28072.t1 | MTR_7g103070 | 36.306 | 157 | 89 | 4 | 6 | 156 | 63 | 214 | 1.24e-24 | 94.7 |
MS.gene28072.t1 | MTR_2g090865 | 35.659 | 129 | 83 | 0 | 5 | 133 | 57 | 185 | 1.27e-24 | 94.7 |
MS.gene28072.t1 | MTR_3g064390 | 43.529 | 85 | 48 | 0 | 1 | 85 | 52 | 136 | 6.45e-24 | 91.7 |
MS.gene28072.t1 | MTR_2g083860 | 33.333 | 120 | 80 | 0 | 1 | 120 | 55 | 174 | 7.46e-24 | 92.8 |
MS.gene28072.t1 | MTR_8g093740 | 39.655 | 116 | 68 | 2 | 3 | 116 | 23 | 138 | 1.20e-23 | 91.3 |
MS.gene28072.t1 | MTR_8g093740 | 39.655 | 116 | 68 | 2 | 3 | 116 | 56 | 171 | 4.61e-23 | 90.5 |
MS.gene28072.t1 | MTR_8g107070 | 34.228 | 149 | 92 | 2 | 3 | 150 | 58 | 201 | 8.08e-23 | 91.3 |
MS.gene28072.t1 | MTR_3g096350 | 39.655 | 116 | 68 | 2 | 3 | 116 | 55 | 170 | 1.04e-22 | 89.7 |
MS.gene28072.t1 | MTR_4g069850 | 36.810 | 163 | 87 | 6 | 3 | 157 | 52 | 206 | 1.96e-22 | 89.0 |
MS.gene28072.t1 | MTR_4g012940 | 37.037 | 162 | 89 | 4 | 3 | 157 | 52 | 207 | 2.45e-22 | 88.6 |
MS.gene28072.t1 | MTR_7g117910 | 36.082 | 97 | 62 | 0 | 3 | 99 | 64 | 160 | 4.64e-21 | 85.5 |
MS.gene28072.t1 | MTR_2g101890 | 35.802 | 162 | 91 | 4 | 3 | 157 | 54 | 209 | 7.11e-21 | 85.1 |
MS.gene28072.t1 | MTR_1g029450 | 37.069 | 116 | 71 | 2 | 3 | 116 | 60 | 175 | 1.36e-20 | 84.3 |
MS.gene28072.t1 | MTR_1g097420 | 32.317 | 164 | 98 | 4 | 1 | 157 | 50 | 207 | 1.59e-19 | 81.3 |
MS.gene28072.t1 | MTR_8g092020 | 30.488 | 164 | 99 | 5 | 1 | 157 | 54 | 209 | 2.29e-19 | 80.9 |
MS.gene28072.t1 | MTR_1g097420 | 32.317 | 164 | 98 | 4 | 1 | 157 | 77 | 234 | 3.72e-19 | 80.9 |
MS.gene28072.t1 | MTR_1g068730 | 39.286 | 84 | 51 | 0 | 3 | 86 | 59 | 142 | 1.19e-18 | 78.2 |
MS.gene28072.t1 | MTR_1g068740 | 41.250 | 80 | 47 | 0 | 3 | 82 | 59 | 138 | 3.93e-18 | 77.4 |
MS.gene28072.t1 | MTR_3g078260 | 37.398 | 123 | 64 | 4 | 3 | 113 | 51 | 172 | 5.34e-15 | 69.7 |
MS.gene28072.t1 | MTR_6g039490 | 27.439 | 164 | 104 | 4 | 1 | 157 | 50 | 205 | 2.78e-14 | 67.8 |
MS.gene28072.t1 | MTR_3g107717 | 33.333 | 120 | 77 | 3 | 8 | 127 | 62 | 178 | 7.44e-14 | 66.6 |
MS.gene28072.t1 | MTR_3g107707 | 33.333 | 120 | 77 | 3 | 8 | 127 | 62 | 178 | 7.52e-14 | 66.6 |
MS.gene28072.t1 | MTR_2g090875 | 34.959 | 123 | 67 | 4 | 3 | 113 | 49 | 170 | 7.59e-14 | 66.2 |
MS.gene28072.t1 | MTR_3g107713 | 33.333 | 120 | 77 | 3 | 8 | 127 | 62 | 178 | 8.17e-14 | 66.6 |
MS.gene28072.t1 | MTR_3g096350 | 40.964 | 83 | 47 | 2 | 3 | 83 | 55 | 137 | 8.68e-14 | 65.1 |
MS.gene28072.t1 | MTR_3g096350 | 39.286 | 84 | 47 | 3 | 3 | 82 | 55 | 138 | 9.01e-14 | 65.1 |
MS.gene28072.t1 | MTR_4g088055 | 34.146 | 123 | 68 | 4 | 3 | 113 | 49 | 170 | 3.03e-13 | 64.7 |
MS.gene28072.t1 | MTR_4g113620 | 31.148 | 122 | 81 | 3 | 1 | 122 | 46 | 164 | 4.00e-13 | 64.7 |
MS.gene28072.t1 | MTR_6g087980 | 36.441 | 118 | 62 | 4 | 8 | 113 | 54 | 170 | 7.81e-13 | 63.5 |
MS.gene28072.t1 | MTR_1452s0010 | 46.552 | 58 | 31 | 0 | 3 | 60 | 25 | 82 | 3.96e-12 | 59.7 |
MS.gene28072.t1 | MTR_4g073250 | 31.707 | 123 | 71 | 4 | 3 | 113 | 49 | 170 | 8.33e-12 | 60.8 |
MS.gene28072.t1 | MTR_8g075240 | 31.933 | 119 | 68 | 4 | 7 | 113 | 53 | 170 | 2.61e-11 | 59.3 |
MS.gene28072.t1 | MTR_5g022600 | 32.203 | 118 | 67 | 4 | 8 | 113 | 54 | 170 | 3.14e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28072.t1 | AT2G22290 | 84.713 | 157 | 24 | 0 | 1 | 157 | 51 | 207 | 3.47e-99 | 284 |
MS.gene28072.t1 | AT5G10260 | 84.713 | 157 | 24 | 0 | 1 | 157 | 51 | 207 | 3.70e-99 | 284 |
MS.gene28072.t1 | AT2G44610 | 82.278 | 158 | 27 | 1 | 1 | 157 | 51 | 208 | 3.38e-95 | 274 |
MS.gene28072.t1 | AT5G64990 | 75.484 | 155 | 37 | 1 | 4 | 157 | 52 | 206 | 1.65e-81 | 239 |
MS.gene28072.t1 | AT4G39890 | 73.780 | 164 | 36 | 3 | 1 | 157 | 51 | 214 | 6.34e-80 | 236 |
MS.gene28072.t1 | AT5G64990 | 72.222 | 162 | 37 | 2 | 4 | 157 | 52 | 213 | 1.18e-78 | 232 |
MS.gene28072.t1 | AT4G19640 | 42.975 | 121 | 69 | 0 | 1 | 121 | 52 | 172 | 2.08e-35 | 122 |
MS.gene28072.t1 | AT5G45130 | 42.975 | 121 | 69 | 0 | 1 | 121 | 52 | 172 | 3.24e-35 | 121 |
MS.gene28072.t1 | AT5G45130 | 42.975 | 121 | 69 | 0 | 1 | 121 | 60 | 180 | 1.13e-34 | 120 |
MS.gene28072.t1 | AT3G54840 | 47.826 | 115 | 60 | 0 | 7 | 121 | 48 | 162 | 2.33e-34 | 118 |
MS.gene28072.t1 | AT3G54840 | 47.826 | 115 | 60 | 0 | 7 | 121 | 82 | 196 | 4.20e-34 | 119 |
MS.gene28072.t1 | AT4G17170 | 36.250 | 160 | 95 | 2 | 3 | 155 | 50 | 209 | 5.91e-34 | 119 |
MS.gene28072.t1 | AT4G35860 | 36.875 | 160 | 94 | 3 | 3 | 155 | 4 | 163 | 6.40e-33 | 114 |
MS.gene28072.t1 | AT4G35860 | 36.875 | 160 | 94 | 3 | 3 | 155 | 50 | 209 | 3.10e-32 | 114 |
MS.gene28072.t1 | AT3G54840 | 48.598 | 107 | 55 | 0 | 7 | 113 | 82 | 188 | 5.05e-32 | 113 |
MS.gene28072.t1 | AT4G17160 | 40.678 | 118 | 70 | 0 | 3 | 120 | 50 | 167 | 3.58e-31 | 111 |
MS.gene28072.t1 | AT5G03520 | 37.821 | 156 | 95 | 2 | 3 | 156 | 49 | 204 | 5.02e-31 | 111 |
MS.gene28072.t1 | AT5G03520 | 37.821 | 156 | 95 | 2 | 3 | 156 | 59 | 214 | 5.24e-31 | 111 |
MS.gene28072.t1 | AT3G11730 | 38.462 | 156 | 86 | 3 | 4 | 155 | 53 | 202 | 1.53e-30 | 110 |
MS.gene28072.t1 | AT1G09630 | 41.525 | 118 | 69 | 0 | 1 | 118 | 54 | 171 | 2.32e-30 | 109 |
MS.gene28072.t1 | AT1G05810 | 37.267 | 161 | 97 | 2 | 1 | 157 | 54 | 214 | 7.27e-30 | 108 |
MS.gene28072.t1 | AT2G31680 | 37.654 | 162 | 96 | 2 | 1 | 157 | 54 | 215 | 1.08e-29 | 108 |
MS.gene28072.t1 | AT1G07410 | 40.000 | 120 | 72 | 0 | 1 | 120 | 54 | 173 | 1.97e-29 | 107 |
MS.gene28072.t1 | AT1G05810 | 37.267 | 161 | 97 | 2 | 1 | 157 | 100 | 260 | 2.00e-29 | 108 |
MS.gene28072.t1 | AT1G02130 | 42.609 | 115 | 66 | 0 | 6 | 120 | 55 | 169 | 2.50e-29 | 106 |
MS.gene28072.t1 | AT3G46830 | 39.474 | 114 | 69 | 0 | 3 | 116 | 56 | 169 | 1.46e-28 | 105 |
MS.gene28072.t1 | AT3G46830 | 39.474 | 114 | 69 | 0 | 3 | 116 | 56 | 169 | 1.46e-28 | 105 |
MS.gene28072.t1 | AT3G53610 | 37.419 | 155 | 88 | 3 | 3 | 156 | 59 | 205 | 1.63e-28 | 105 |
MS.gene28072.t1 | AT3G53610 | 37.419 | 155 | 88 | 3 | 3 | 156 | 59 | 205 | 1.63e-28 | 105 |
MS.gene28072.t1 | AT3G53610 | 37.419 | 155 | 88 | 3 | 3 | 156 | 59 | 205 | 1.63e-28 | 105 |
MS.gene28072.t1 | AT5G59150 | 39.474 | 114 | 69 | 0 | 3 | 116 | 5 | 118 | 1.64e-28 | 103 |
MS.gene28072.t1 | AT4G17530 | 36.129 | 155 | 91 | 2 | 4 | 156 | 53 | 201 | 2.19e-28 | 104 |
MS.gene28072.t1 | AT5G59840 | 38.312 | 154 | 85 | 4 | 3 | 154 | 59 | 204 | 2.61e-28 | 104 |
MS.gene28072.t1 | AT3G46060 | 38.312 | 154 | 85 | 4 | 3 | 154 | 59 | 204 | 3.49e-28 | 104 |
MS.gene28072.t1 | AT3G46060 | 38.312 | 154 | 85 | 4 | 3 | 154 | 59 | 204 | 3.49e-28 | 104 |
MS.gene28072.t1 | AT3G46060 | 38.312 | 154 | 85 | 4 | 3 | 154 | 59 | 204 | 3.49e-28 | 104 |
MS.gene28072.t1 | AT5G47200 | 41.026 | 117 | 69 | 0 | 4 | 120 | 53 | 169 | 3.63e-28 | 103 |
MS.gene28072.t1 | AT3G09900 | 37.888 | 161 | 90 | 3 | 3 | 156 | 59 | 216 | 3.73e-28 | 103 |
MS.gene28072.t1 | AT5G47520 | 35.152 | 165 | 98 | 4 | 1 | 156 | 56 | 220 | 3.79e-28 | 104 |
MS.gene28072.t1 | AT5G65270 | 36.207 | 116 | 74 | 0 | 1 | 116 | 59 | 174 | 5.62e-28 | 103 |
MS.gene28072.t1 | AT5G59150 | 38.793 | 116 | 71 | 0 | 1 | 116 | 54 | 169 | 5.91e-28 | 103 |
MS.gene28072.t1 | AT1G18200 | 43.119 | 109 | 62 | 0 | 5 | 113 | 59 | 167 | 9.12e-28 | 103 |
MS.gene28072.t1 | AT5G47960 | 33.540 | 161 | 99 | 2 | 3 | 155 | 59 | 219 | 3.49e-27 | 101 |
MS.gene28072.t1 | AT2G43130 | 35.220 | 159 | 98 | 2 | 1 | 155 | 54 | 211 | 3.87e-27 | 101 |
MS.gene28072.t1 | AT1G73640 | 39.823 | 113 | 68 | 0 | 1 | 113 | 55 | 167 | 5.16e-27 | 101 |
MS.gene28072.t1 | AT5G60860 | 32.895 | 152 | 84 | 1 | 1 | 134 | 55 | 206 | 8.23e-27 | 100 |
MS.gene28072.t1 | AT3G12160 | 35.802 | 162 | 97 | 3 | 1 | 155 | 57 | 218 | 9.12e-27 | 100 |
MS.gene28072.t1 | AT4G39990 | 34.167 | 120 | 79 | 0 | 1 | 120 | 59 | 178 | 1.54e-26 | 100 |
MS.gene28072.t1 | AT3G15060 | 36.667 | 120 | 76 | 0 | 1 | 120 | 55 | 174 | 2.11e-26 | 99.8 |
MS.gene28072.t1 | AT4G18430 | 32.258 | 155 | 87 | 1 | 1 | 137 | 55 | 209 | 4.19e-26 | 99.0 |
MS.gene28072.t1 | AT1G28550 | 38.938 | 113 | 69 | 0 | 4 | 116 | 58 | 170 | 4.81e-26 | 98.6 |
MS.gene28072.t1 | AT3G07410 | 42.342 | 111 | 64 | 0 | 3 | 113 | 56 | 166 | 2.01e-25 | 97.1 |
MS.gene28072.t1 | AT3G09910 | 38.608 | 158 | 88 | 5 | 1 | 156 | 54 | 204 | 5.73e-25 | 95.5 |
MS.gene28072.t1 | AT3G09910 | 38.608 | 158 | 88 | 5 | 1 | 156 | 54 | 204 | 5.73e-25 | 95.5 |
MS.gene28072.t1 | AT3G09910 | 38.608 | 158 | 88 | 5 | 1 | 156 | 54 | 204 | 5.73e-25 | 95.5 |
MS.gene28072.t1 | AT1G16920 | 33.333 | 120 | 80 | 0 | 1 | 120 | 55 | 174 | 1.08e-24 | 95.1 |
MS.gene28072.t1 | AT2G33870 | 36.441 | 118 | 75 | 0 | 3 | 120 | 57 | 174 | 1.35e-24 | 95.1 |
MS.gene28072.t1 | AT4G19640 | 43.023 | 86 | 49 | 0 | 1 | 86 | 52 | 137 | 2.08e-24 | 92.4 |
MS.gene28072.t1 | AT5G45750 | 31.325 | 166 | 95 | 5 | 3 | 156 | 57 | 215 | 2.15e-24 | 94.4 |
MS.gene28072.t1 | AT5G03530 | 38.217 | 157 | 86 | 6 | 6 | 156 | 59 | 210 | 2.77e-24 | 94.0 |
MS.gene28072.t1 | AT5G03530 | 38.217 | 157 | 86 | 6 | 6 | 156 | 59 | 210 | 2.77e-24 | 94.0 |
MS.gene28072.t1 | AT3G09910 | 41.176 | 119 | 68 | 2 | 1 | 117 | 54 | 172 | 3.88e-24 | 93.2 |
MS.gene28072.t1 | AT3G09910 | 41.176 | 119 | 68 | 2 | 1 | 117 | 54 | 172 | 3.88e-24 | 93.2 |
MS.gene28072.t1 | AT1G01200 | 35.329 | 167 | 95 | 5 | 3 | 157 | 72 | 237 | 6.79e-24 | 93.6 |
MS.gene28072.t1 | AT4G19640 | 41.237 | 97 | 53 | 1 | 1 | 97 | 52 | 144 | 7.83e-24 | 92.4 |
MS.gene28072.t1 | AT1G43890 | 40.157 | 127 | 72 | 3 | 5 | 129 | 58 | 182 | 3.40e-23 | 91.3 |
MS.gene28072.t1 | AT1G43890 | 40.157 | 127 | 72 | 3 | 5 | 129 | 58 | 182 | 3.40e-23 | 91.3 |
MS.gene28072.t1 | AT1G43890 | 40.157 | 127 | 72 | 3 | 5 | 129 | 58 | 182 | 3.40e-23 | 91.3 |
MS.gene28072.t1 | AT1G06400 | 35.088 | 114 | 74 | 0 | 3 | 116 | 57 | 170 | 4.11e-23 | 90.9 |
MS.gene28072.t1 | AT3G18820 | 37.423 | 163 | 86 | 6 | 3 | 157 | 52 | 206 | 5.14e-23 | 90.5 |
MS.gene28072.t1 | AT4G18800 | 34.167 | 120 | 75 | 2 | 3 | 120 | 57 | 174 | 1.57e-22 | 89.4 |
MS.gene28072.t1 | AT1G52280 | 36.420 | 162 | 89 | 4 | 3 | 157 | 52 | 206 | 5.36e-22 | 87.8 |
MS.gene28072.t1 | AT3G16100 | 36.420 | 162 | 89 | 4 | 3 | 157 | 52 | 206 | 4.30e-20 | 82.8 |
MS.gene28072.t1 | AT4G09720 | 34.146 | 164 | 94 | 6 | 1 | 157 | 16 | 172 | 5.04e-20 | 82.0 |
MS.gene28072.t1 | AT4G09720 | 34.146 | 164 | 94 | 6 | 1 | 157 | 16 | 172 | 5.04e-20 | 82.0 |
MS.gene28072.t1 | AT4G09720 | 34.146 | 164 | 94 | 6 | 1 | 157 | 16 | 172 | 5.04e-20 | 82.0 |
MS.gene28072.t1 | AT4G09720 | 34.146 | 164 | 94 | 6 | 1 | 157 | 50 | 206 | 1.38e-19 | 81.6 |
MS.gene28072.t1 | AT1G22740 | 32.927 | 164 | 93 | 6 | 1 | 157 | 50 | 203 | 1.41e-19 | 81.6 |
MS.gene28072.t1 | AT5G39620 | 34.356 | 163 | 92 | 5 | 3 | 157 | 49 | 204 | 1.71e-19 | 81.3 |
MS.gene28072.t1 | AT2G21880 | 33.918 | 171 | 90 | 6 | 1 | 157 | 26 | 187 | 2.73e-19 | 80.5 |
MS.gene28072.t1 | AT2G21880 | 33.918 | 171 | 90 | 6 | 1 | 157 | 26 | 187 | 2.73e-19 | 80.5 |
MS.gene28072.t1 | AT1G49300 | 34.969 | 163 | 90 | 6 | 3 | 157 | 52 | 206 | 3.14e-19 | 80.5 |
MS.gene28072.t1 | AT1G49300 | 34.969 | 163 | 90 | 6 | 3 | 157 | 52 | 206 | 3.14e-19 | 80.5 |
MS.gene28072.t1 | AT2G21880 | 33.918 | 171 | 90 | 6 | 1 | 157 | 51 | 212 | 4.64e-19 | 80.5 |
MS.gene28072.t1 | AT4G09720 | 32.544 | 169 | 95 | 6 | 1 | 157 | 50 | 211 | 1.04e-17 | 76.6 |
MS.gene28072.t1 | AT4G09720 | 31.429 | 175 | 95 | 6 | 1 | 157 | 50 | 217 | 4.24e-17 | 75.1 |
MS.gene28072.t1 | AT2G44690 | 37.398 | 123 | 64 | 4 | 3 | 113 | 61 | 182 | 3.70e-16 | 72.8 |
MS.gene28072.t1 | AT5G55080 | 32.500 | 120 | 78 | 3 | 8 | 127 | 62 | 178 | 1.02e-15 | 71.6 |
MS.gene28072.t1 | AT5G20010 | 31.250 | 144 | 92 | 4 | 8 | 151 | 62 | 198 | 6.38e-15 | 69.7 |
MS.gene28072.t1 | AT5G46025 | 36.782 | 87 | 54 | 1 | 35 | 120 | 20 | 106 | 7.64e-15 | 67.0 |
MS.gene28072.t1 | AT5G20020 | 31.250 | 144 | 92 | 4 | 8 | 151 | 62 | 198 | 9.96e-15 | 68.9 |
MS.gene28072.t1 | AT3G48040 | 37.398 | 123 | 64 | 4 | 3 | 113 | 51 | 172 | 1.80e-14 | 68.2 |
MS.gene28072.t1 | AT5G55190 | 33.333 | 120 | 77 | 3 | 8 | 127 | 62 | 178 | 1.17e-13 | 66.2 |
MS.gene28072.t1 | AT4G35020 | 34.146 | 123 | 68 | 4 | 3 | 113 | 49 | 170 | 1.55e-13 | 65.5 |
MS.gene28072.t1 | AT4G35020 | 34.146 | 123 | 68 | 4 | 3 | 113 | 49 | 170 | 1.55e-13 | 65.5 |
MS.gene28072.t1 | AT4G35020 | 34.146 | 123 | 68 | 4 | 3 | 113 | 49 | 170 | 1.55e-13 | 65.5 |
MS.gene28072.t1 | AT5G62880 | 35.772 | 123 | 66 | 4 | 3 | 113 | 51 | 172 | 3.51e-13 | 64.7 |
MS.gene28072.t1 | AT3G48040 | 37.719 | 114 | 58 | 4 | 3 | 104 | 51 | 163 | 8.20e-13 | 63.2 |
MS.gene28072.t1 | AT1G20090 | 33.333 | 123 | 69 | 4 | 3 | 113 | 48 | 169 | 9.09e-13 | 63.5 |
MS.gene28072.t1 | AT3G51300 | 34.454 | 119 | 65 | 4 | 7 | 113 | 53 | 170 | 1.11e-12 | 63.2 |
MS.gene28072.t1 | AT1G75840 | 33.333 | 123 | 69 | 4 | 3 | 113 | 49 | 170 | 1.15e-12 | 63.2 |
MS.gene28072.t1 | AT3G51290 | 34.454 | 119 | 65 | 4 | 7 | 113 | 654 | 771 | 2.40e-12 | 63.9 |
MS.gene28072.t1 | AT4G35950 | 34.454 | 119 | 65 | 4 | 7 | 113 | 53 | 170 | 3.98e-12 | 61.6 |
MS.gene28072.t1 | AT2G17800 | 34.454 | 119 | 65 | 4 | 7 | 113 | 53 | 170 | 5.21e-12 | 61.2 |
MS.gene28072.t1 | AT2G17800 | 34.454 | 119 | 65 | 4 | 7 | 113 | 53 | 170 | 5.21e-12 | 61.2 |
MS.gene28072.t1 | AT5G45970 | 30.894 | 123 | 72 | 4 | 3 | 113 | 49 | 170 | 1.42e-11 | 60.1 |
MS.gene28072.t1 | AT5G62880 | 35.965 | 114 | 60 | 4 | 3 | 104 | 51 | 163 | 1.73e-11 | 59.7 |
MS.gene28072.t1 | AT4G28950 | 32.231 | 121 | 71 | 4 | 3 | 113 | 49 | 168 | 2.33e-11 | 59.7 |
Find 36 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACCCTTTCTTCTACAAATA+AGG | 0.224029 | 4.4:+10734246 | MS.gene28072:CDS |
TGAGACTTCTAAATCTTTCT+TGG | 0.265565 | 4.4:-10732226 | None:intergenic |
GAACTGTTCGTTTGCAGCTT+TGG | 0.333518 | 4.4:+10732033 | MS.gene28072:CDS |
TCCTCCCTGCTGCTCTGTAT+TGG | 0.354070 | 4.4:-10734311 | None:intergenic |
CTTCCTTATTTGTAGAAGAA+AGG | 0.383495 | 4.4:-10734249 | None:intergenic |
GAGGAGGTTGCTCATGTTAG+AGG | 0.391358 | 4.4:+10734329 | MS.gene28072:CDS |
AAGATTGCTTCCGCCTTGCC+AGG | 0.393556 | 4.4:+10734217 | MS.gene28072:CDS |
GATGCCAAGTCAAAAGAGTT+TGG | 0.394493 | 4.4:+10732946 | MS.gene28072:CDS |
AACGAACAGTTCTATCTTCA+AGG | 0.399142 | 4.4:-10732022 | None:intergenic |
GAAGAAAGGGTTTCCATCCC+TGG | 0.417515 | 4.4:-10734235 | None:intergenic |
TTCCTTATTTGTAGAAGAAA+GGG | 0.422408 | 4.4:-10734248 | None:intergenic |
GAAGAATCTCTTATGTAGCT+TGG | 0.431932 | 4.4:-10732251 | None:intergenic |
TGCTTCCGCCTTGCCAGGGA+TGG | 0.448090 | 4.4:+10734222 | MS.gene28072:CDS |
TTCATCCAATACAGAGCAGC+AGG | 0.451660 | 4.4:+10734306 | MS.gene28072:CDS |
AAACTGATCTTGTCGAGAAA+AGG | 0.473751 | 4.4:+10732579 | MS.gene28072:CDS |
AGGCAAGTTTCTATAGAAGA+AGG | 0.486341 | 4.4:+10732922 | MS.gene28072:intron |
GATGTTATAATTGTCTTGGT+TGG | 0.487954 | 4.4:+10732551 | MS.gene28072:CDS |
TAGTGATGTTATAATTGTCT+TGG | 0.496039 | 4.4:+10732547 | MS.gene28072:CDS |
ATCGAAACCAGTGCAAAAGC+AGG | 0.513342 | 4.4:+10732979 | MS.gene28072:CDS |
AATACAGAGCAGCAGGGAGG+AGG | 0.528419 | 4.4:+10734313 | MS.gene28072:CDS |
GTATTGGATGAATGCACTGT+GGG | 0.529684 | 4.4:-10734295 | None:intergenic |
TTAACTTTCAGGGATACTGC+AGG | 0.536162 | 4.4:+10732203 | MS.gene28072:intron |
AAAAGCAGGCTTCAATATCA+AGG | 0.552081 | 4.4:+10732993 | MS.gene28072:CDS |
CACTAACAAGTGGGTTGAGG+AGG | 0.553351 | 4.4:+10732508 | MS.gene28072:CDS |
GAACACTAACAAGTGGGTTG+AGG | 0.553502 | 4.4:+10732505 | MS.gene28072:CDS |
TTCTACAAATAAGGAAGACA+TGG | 0.563578 | 4.4:+10734255 | MS.gene28072:CDS |
AGATTGCTTCCGCCTTGCCA+GGG | 0.573903 | 4.4:+10734218 | MS.gene28072:CDS |
AAGGGTTTCCATCCCTGGCA+AGG | 0.588850 | 4.4:-10734230 | None:intergenic |
CATTTCTGAACACTAACAAG+TGG | 0.594464 | 4.4:+10732498 | MS.gene28072:CDS |
ATTTCTGAACACTAACAAGT+GGG | 0.616106 | 4.4:+10732499 | MS.gene28072:CDS |
GAAGCAATCTTACGAAACAA+AGG | 0.623923 | 4.4:-10734205 | None:intergenic |
GAGGAGGTGCGTCAAGAACG+TGG | 0.657614 | 4.4:+10732524 | MS.gene28072:CDS |
TGTATTGGATGAATGCACTG+TGG | 0.660739 | 4.4:-10734296 | None:intergenic |
TCCAATACAGAGCAGCAGGG+AGG | 0.703010 | 4.4:+10734310 | MS.gene28072:CDS |
GGTTTCCATCCCTGGCAAGG+CGG | 0.703532 | 4.4:-10734227 | None:intergenic |
TCATCCAATACAGAGCAGCA+GGG | 0.714266 | 4.4:+10734307 | MS.gene28072:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAAAAAAAATTGGATT+TGG | + | chr4.4:10733939-10733958 | MS.gene28072:intron | 10.0% |
!! | AAATAAAAAAAATTGGATTT+GGG | + | chr4.4:10733940-10733959 | MS.gene28072:intron | 10.0% |
!!! | TAATAATAATAACTAGTTTA+AGG | + | chr4.4:10733811-10733830 | MS.gene28072:intron | 10.0% |
!! | GTTAATGAAATTAATTGAAT+TGG | - | chr4.4:10732832-10732851 | None:intergenic | 15.0% |
!! | TATCGTTATTTAACTAAAAA+AGG | - | chr4.4:10732418-10732437 | None:intergenic | 15.0% |
!! | TCAATTAATTTCATTAACAA+AGG | + | chr4.4:10732834-10732853 | MS.gene28072:intron | 15.0% |
!!! | GTTTTTGTTTAATATCATAT+TGG | + | chr4.4:10732671-10732690 | MS.gene28072:intron | 15.0% |
!!! | TCTAATTATTTTTTATATGG+CGG | + | chr4.4:10732889-10732908 | MS.gene28072:intron | 15.0% |
!!! | TGGTCTAATTATTTTTTATA+TGG | + | chr4.4:10732886-10732905 | MS.gene28072:intron | 15.0% |
!! | AAAAAAAATATCAATTGACG+AGG | - | chr4.4:10732070-10732089 | None:intergenic | 20.0% |
!! | AATTAATTGAATTGGCTATA+AGG | - | chr4.4:10732824-10732843 | None:intergenic | 20.0% |
!! | AGCTTATTTATATTGTAGTT+TGG | - | chr4.4:10733629-10733648 | None:intergenic | 20.0% |
!! | AGGTTAATAACTATAAATTG+AGG | - | chr4.4:10732448-10732467 | None:intergenic | 20.0% |
!! | ATCATTACTAAATTGTTCTA+AGG | + | chr4.4:10733255-10733274 | MS.gene28072:intron | 20.0% |
!! | ATGAATATATAGATCAAACT+CGG | - | chr4.4:10732619-10732638 | None:intergenic | 20.0% |
!! | CACTTATTTATATTGTAGTT+TGG | - | chr4.4:10733685-10733704 | None:intergenic | 20.0% |
!! | TATTCGATGTAAAACAAAAT+AGG | - | chr4.4:10734092-10734111 | None:intergenic | 20.0% |
!! | TCAGAAATAGTAAAAAGAAA+AGG | - | chr4.4:10732171-10732190 | None:intergenic | 20.0% |
!! | TTATTATTCAAACAAGTACT+AGG | - | chr4.4:10733785-10733804 | None:intergenic | 20.0% |
!!! | GAGTATTTTCTTTGTAATTA+TGG | - | chr4.4:10733200-10733219 | None:intergenic | 20.0% |
!!! | TAAGGTTTTTTAATACTCAA+TGG | + | chr4.4:10733829-10733848 | MS.gene28072:intron | 20.0% |
!!! | TTAGTGTATTTTAACTTTCA+GGG | + | chr4.4:10732193-10732212 | MS.gene28072:intron | 20.0% |
!!! | TTTTTTTGTTTGGTCAAAAT+TGG | - | chr4.4:10733922-10733941 | None:intergenic | 20.0% |
! | ACGATAAAAACTCAATACTT+CGG | + | chr4.4:10733442-10733461 | MS.gene28072:intron | 25.0% |
! | AGATGATGCATTATGATTTA+TGG | + | chr4.4:10732113-10732132 | MS.gene28072:intron | 25.0% |
! | TAGCAAAATTACAAAGAACA+TGG | - | chr4.4:10732772-10732791 | None:intergenic | 25.0% |
! | TAGTGATGTTATAATTGTCT+TGG | + | chr4.4:10732547-10732566 | MS.gene28072:CDS | 25.0% |
! | TCTATATATTCATTCACAAC+CGG | + | chr4.4:10732626-10732645 | MS.gene28072:intron | 25.0% |
! | TTAGATGTGAAAGTTAGTAA+AGG | - | chr4.4:10734060-10734079 | None:intergenic | 25.0% |
! | TTTCAAATATTGCGATGTTA+TGG | + | chr4.4:10732866-10732885 | MS.gene28072:intron | 25.0% |
!! | AAAAAAATTGGATTTGGGTT+TGG | + | chr4.4:10733945-10733964 | MS.gene28072:intron | 25.0% |
!! | AATGAATTTTCATAGTTGCT+TGG | + | chr4.4:10733024-10733043 | MS.gene28072:intron | 25.0% |
!! | ATGAATTTTCATAGTTGCTT+GGG | + | chr4.4:10733025-10733044 | MS.gene28072:intron | 25.0% |
!! | TTCCTTATTTGTAGAAGAAA+GGG | - | chr4.4:10734251-10734270 | None:intergenic | 25.0% |
!! | TTTTTAATACTCAATGGTAC+TGG | + | chr4.4:10733835-10733854 | MS.gene28072:intron | 25.0% |
!!! | ATATTTTTTGTGCTACTTGT+TGG | - | chr4.4:10733487-10733506 | None:intergenic | 25.0% |
!!! | CTTAGTGTATTTTAACTTTC+AGG | + | chr4.4:10732192-10732211 | MS.gene28072:intron | 25.0% |
!!! | CTTTGTAATTTTGCTATGAT+AGG | + | chr4.4:10732776-10732795 | MS.gene28072:intron | 25.0% |
AACCCTTTCTTCTACAAATA+AGG | + | chr4.4:10734246-10734265 | MS.gene28072:CDS | 30.0% | |
ATAGATACTAAATCCCACAT+CGG | + | chr4.4:10733582-10733601 | MS.gene28072:intron | 30.0% | |
ATTTCTGAACACTAACAAGT+GGG | + | chr4.4:10732499-10732518 | MS.gene28072:CDS | 30.0% | |
GATGTTATAATTGTCTTGGT+TGG | + | chr4.4:10732551-10732570 | MS.gene28072:CDS | 30.0% | |
TACATTAGAACAGCTTACTT+AGG | - | chr4.4:10732468-10732487 | None:intergenic | 30.0% | |
TGAAACAAAAAACACCTACA+CGG | - | chr4.4:10732148-10732167 | None:intergenic | 30.0% | |
TGAGACTTCTAAATCTTTCT+TGG | - | chr4.4:10732229-10732248 | None:intergenic | 30.0% | |
TTCTACAAATAAGGAAGACA+TGG | + | chr4.4:10734255-10734274 | MS.gene28072:CDS | 30.0% | |
! | AGCTTTGTCAAGCTATTATT+AGG | - | chr4.4:10733421-10733440 | None:intergenic | 30.0% |
! | CTTCCTTATTTGTAGAAGAA+AGG | - | chr4.4:10734252-10734271 | None:intergenic | 30.0% |
!! | GTTGTTATTTCTTTGCTTCA+TGG | - | chr4.4:10733719-10733738 | None:intergenic | 30.0% |
AAAAGCAGGCTTCAATATCA+AGG | + | chr4.4:10732993-10733012 | MS.gene28072:CDS | 35.0% | |
AAACTGATCTTGTCGAGAAA+AGG | + | chr4.4:10732579-10732598 | MS.gene28072:CDS | 35.0% | |
AACGAACAGTTCTATCTTCA+AGG | - | chr4.4:10732025-10732044 | None:intergenic | 35.0% | |
AGGCAAGTTTCTATAGAAGA+AGG | + | chr4.4:10732922-10732941 | MS.gene28072:intron | 35.0% | |
CATTTCTGAACACTAACAAG+TGG | + | chr4.4:10732498-10732517 | MS.gene28072:CDS | 35.0% | |
GAAGAATCTCTTATGTAGCT+TGG | - | chr4.4:10732254-10732273 | None:intergenic | 35.0% | |
GAAGCAATCTTACGAAACAA+AGG | - | chr4.4:10734208-10734227 | None:intergenic | 35.0% | |
GTAACAAGATGTGTGATCAA+TGG | - | chr4.4:10733319-10733338 | None:intergenic | 35.0% | |
GTTTATCTTCTTTCCCATGT+TGG | + | chr4.4:10734141-10734160 | MS.gene28072:intron | 35.0% | |
TAAGCTGTTCTAATGTAGAC+AGG | + | chr4.4:10732471-10732490 | MS.gene28072:intron | 35.0% | |
TATAGATCACATGCATCCAT+GGG | - | chr4.4:10734007-10734026 | None:intergenic | 35.0% | |
TGTAAGCTTGCAATGTAGTT+TGG | - | chr4.4:10733659-10733678 | None:intergenic | 35.0% | |
TTATAGATCACATGCATCCA+TGG | - | chr4.4:10734008-10734027 | None:intergenic | 35.0% | |
! | TGCATTGACAGATAACAATG+AGG | - | chr4.4:10734176-10734195 | None:intergenic | 35.0% |
!! | GATTCCAAACTCTTTTGACT+TGG | - | chr4.4:10732953-10732972 | None:intergenic | 35.0% |
CTCTCTTTCTGCTACATTGA+AGG | + | chr4.4:10733738-10733757 | MS.gene28072:intron | 40.0% | |
GATGCCAAGTCAAAAGAGTT+TGG | + | chr4.4:10732946-10732965 | MS.gene28072:CDS | 40.0% | |
GTATTGGATGAATGCACTGT+GGG | - | chr4.4:10734298-10734317 | None:intergenic | 40.0% | |
TGTATTGGATGAATGCACTG+TGG | - | chr4.4:10734299-10734318 | None:intergenic | 40.0% | |
TTAACTTTCAGGGATACTGC+AGG | + | chr4.4:10732203-10732222 | MS.gene28072:intron | 40.0% | |
!! | AATTGGATTTGGGTTTGGTG+TGG | + | chr4.4:10733950-10733969 | MS.gene28072:intron | 40.0% |
!! | TATATGGCGGCTTTGTTTAC+AGG | + | chr4.4:10732902-10732921 | MS.gene28072:intron | 40.0% |
!! | TTGTGCTACTTGTTGGAAAG+TGG | - | chr4.4:10733480-10733499 | None:intergenic | 40.0% |
AAACACCTACACGGCTACAA+CGG | - | chr4.4:10732139-10732158 | None:intergenic | 45.0% | |
ACCATACCCAGTCAGAAAAC+CGG | - | chr4.4:10732648-10732667 | None:intergenic | 45.0% | |
ATAGGTCAAGTGTCTTGCAG+TGG | + | chr4.4:10732794-10732813 | MS.gene28072:intron | 45.0% | |
ATCGAAACCAGTGCAAAAGC+AGG | + | chr4.4:10732979-10732998 | MS.gene28072:CDS | 45.0% | |
ATCTGGACTTACAACGTTGG+TGG | + | chr4.4:10733099-10733118 | MS.gene28072:intron | 45.0% | |
CAGGCTTCAATATCAAGGTC+AGG | + | chr4.4:10732998-10733017 | MS.gene28072:intron | 45.0% | |
CCTCAACTATGATGCATGCA+GGG | + | chr4.4:10733072-10733091 | MS.gene28072:intron | 45.0% | |
CTCAACTATGATGCATGCAG+GGG | + | chr4.4:10733073-10733092 | MS.gene28072:intron | 45.0% | |
GAACTGTTCGTTTGCAGCTT+TGG | + | chr4.4:10732033-10732052 | MS.gene28072:CDS | 45.0% | |
GAGGACACAAGAACCAACAT+GGG | - | chr4.4:10734157-10734176 | None:intergenic | 45.0% | |
TAGGAATAGCCCACAACTTG+CGG | - | chr4.4:10733766-10733785 | None:intergenic | 45.0% | |
TCATCCAATACAGAGCAGCA+GGG | + | chr4.4:10734307-10734326 | MS.gene28072:CDS | 45.0% | |
TCCTCAACTATGATGCATGC+AGG | + | chr4.4:10733071-10733090 | MS.gene28072:intron | 45.0% | |
TCTGGACTTACAACGTTGGT+GGG | + | chr4.4:10733100-10733119 | MS.gene28072:intron | 45.0% | |
TGAGGACACAAGAACCAACA+TGG | - | chr4.4:10734158-10734177 | None:intergenic | 45.0% | |
TTCATCCAATACAGAGCAGC+AGG | + | chr4.4:10734306-10734325 | MS.gene28072:CDS | 45.0% | |
!! | ATTGAAGCCTGCTTTTGCAC+TGG | - | chr4.4:10732989-10733008 | None:intergenic | 45.0% |
!! | GAACACTAACAAGTGGGTTG+AGG | + | chr4.4:10732505-10732524 | MS.gene28072:CDS | 45.0% |
!! | TCACAACCGGTTTTCTGACT+GGG | + | chr4.4:10732639-10732658 | MS.gene28072:intron | 45.0% |
!! | TTCACAACCGGTTTTCTGAC+TGG | + | chr4.4:10732638-10732657 | MS.gene28072:intron | 45.0% |
!! | ACAAAAAAAATAAAAAAAAT+TGG | + | chr4.4:10733933-10733952 | MS.gene28072:intron | 5.0% |
!!! | TTTTTTTTATTTTTTTTGTT+TGG | - | chr4.4:10733932-10733951 | None:intergenic | 5.0% |
AACTATGATGCATGCAGGGG+CGG | + | chr4.4:10733076-10733095 | MS.gene28072:intron | 50.0% | |
AGATCACATGCATCCATGGG+CGG | - | chr4.4:10734004-10734023 | None:intergenic | 50.0% | |
AGCTTGCAATGTAGCCGATG+TGG | - | chr4.4:10733599-10733618 | None:intergenic | 50.0% | |
CCCTGCATGCATCATAGTTG+AGG | - | chr4.4:10733075-10733094 | None:intergenic | 50.0% | |
CGGATCTGGACTTACAACGT+TGG | + | chr4.4:10733096-10733115 | MS.gene28072:intron | 50.0% | |
CTGGACTTACAACGTTGGTG+GGG | + | chr4.4:10733101-10733120 | MS.gene28072:intron | 50.0% | |
GAAGAAAGGGTTTCCATCCC+TGG | - | chr4.4:10734238-10734257 | None:intergenic | 50.0% | |
GCTTGCAATGTAGCCGATGT+GGG | - | chr4.4:10733598-10733617 | None:intergenic | 50.0% | |
!! | ACCGGTTTTCTGACTGGGTA+TGG | + | chr4.4:10732644-10732663 | MS.gene28072:intron | 50.0% |
!! | ATTGAAGGCACCGCAAGTTG+TGG | + | chr4.4:10733753-10733772 | MS.gene28072:intron | 50.0% |
!! | CACTAACAAGTGGGTTGAGG+AGG | + | chr4.4:10732508-10732527 | MS.gene28072:CDS | 50.0% |
!! | TTGAAGGCACCGCAAGTTGT+GGG | + | chr4.4:10733754-10733773 | MS.gene28072:intron | 50.0% |
AAGATTGCTTCCGCCTTGCC+AGG | + | chr4.4:10734217-10734236 | MS.gene28072:CDS | 55.0% | |
AAGGGTTTCCATCCCTGGCA+AGG | - | chr4.4:10734233-10734252 | None:intergenic | 55.0% | |
AATACAGAGCAGCAGGGAGG+AGG | + | chr4.4:10734313-10734332 | MS.gene28072:CDS | 55.0% | |
AGATTGCTTCCGCCTTGCCA+GGG | + | chr4.4:10734218-10734237 | MS.gene28072:CDS | 55.0% | |
ATCCATGGGCGGACCTGAAT+AGG | - | chr4.4:10733993-10734012 | None:intergenic | 55.0% | |
GACCTGAATAGGTCCTGGTG+TGG | - | chr4.4:10733982-10734001 | None:intergenic | 55.0% | |
TATGGCCGTTGTAGCCGTGT+AGG | + | chr4.4:10732131-10732150 | MS.gene28072:intron | 55.0% | |
TCCAATACAGAGCAGCAGGG+AGG | + | chr4.4:10734310-10734329 | MS.gene28072:CDS | 55.0% | |
TCCTCCCTGCTGCTCTGTAT+TGG | - | chr4.4:10734314-10734333 | None:intergenic | 55.0% | |
TGCCACACCAGGACCTATTC+AGG | + | chr4.4:10733977-10733996 | MS.gene28072:intron | 55.0% | |
GACCTATTCAGGTCCGCCCA+TGG | + | chr4.4:10733988-10734007 | MS.gene28072:intron | 60.0% | |
GGTTTCCATCCCTGGCAAGG+CGG | - | chr4.4:10734230-10734249 | None:intergenic | 60.0% | |
! | GAGGAGGTGCGTCAAGAACG+TGG | + | chr4.4:10732524-10732543 | MS.gene28072:CDS | 60.0% |
GATGCATGCAGGGGCGGATC+TGG | + | chr4.4:10733082-10733101 | MS.gene28072:intron | 65.0% | |
GGGCGGACCTGAATAGGTCC+TGG | - | chr4.4:10733987-10734006 | None:intergenic | 65.0% | |
GGTGTGGCACTTGCCACACC+AGG | + | chr4.4:10733966-10733985 | MS.gene28072:intron | 65.0% | |
TGCTTCCGCCTTGCCAGGGA+TGG | + | chr4.4:10734222-10734241 | MS.gene28072:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 10732017 | 10734348 | 10732017 | ID=MS.gene28072 |
chr4.4 | mRNA | 10732017 | 10734348 | 10732017 | ID=MS.gene28072.t1;Parent=MS.gene28072 |
chr4.4 | exon | 10732017 | 10732054 | 10732017 | ID=MS.gene28072.t1.exon1;Parent=MS.gene28072.t1 |
chr4.4 | CDS | 10732017 | 10732054 | 10732017 | ID=cds.MS.gene28072.t1;Parent=MS.gene28072.t1 |
chr4.4 | exon | 10732214 | 10732302 | 10732214 | ID=MS.gene28072.t1.exon2;Parent=MS.gene28072.t1 |
chr4.4 | CDS | 10732214 | 10732302 | 10732214 | ID=cds.MS.gene28072.t1;Parent=MS.gene28072.t1 |
chr4.4 | exon | 10732489 | 10732600 | 10732489 | ID=MS.gene28072.t1.exon3;Parent=MS.gene28072.t1 |
chr4.4 | CDS | 10732489 | 10732600 | 10732489 | ID=cds.MS.gene28072.t1;Parent=MS.gene28072.t1 |
chr4.4 | exon | 10732924 | 10733014 | 10732924 | ID=MS.gene28072.t1.exon4;Parent=MS.gene28072.t1 |
chr4.4 | CDS | 10732924 | 10733014 | 10732924 | ID=cds.MS.gene28072.t1;Parent=MS.gene28072.t1 |
chr4.4 | exon | 10734205 | 10734348 | 10734205 | ID=MS.gene28072.t1.exon5;Parent=MS.gene28072.t1 |
chr4.4 | CDS | 10734205 | 10734348 | 10734205 | ID=cds.MS.gene28072.t1;Parent=MS.gene28072.t1 |
Gene Sequence |
Protein sequence |