Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059026.t1 | XP_013468393.1 | 94.7 | 188 | 8 | 2 | 1 | 187 | 1 | 187 | 1.50E-75 | 292.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059026.t1 | Q8GWS0 | 73.1 | 104 | 28 | 0 | 81 | 184 | 68 | 171 | 1.9e-42 | 173.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059026.t1 | I3S8X9 | 94.7 | 188 | 8 | 2 | 1 | 187 | 1 | 187 | 1.1e-75 | 292.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050876 | MS.gene059026 | 0.823782 | 1.15E-53 | -1.69E-46 |
MS.gene05087 | MS.gene059026 | 0.840384 | 8.98E-58 | -1.69E-46 |
MS.gene054638 | MS.gene059026 | 0.840982 | 6.26E-58 | -1.69E-46 |
MS.gene055634 | MS.gene059026 | 0.80243 | 5.63E-49 | -1.69E-46 |
MS.gene056910 | MS.gene059026 | 0.846412 | 2.21E-59 | -1.69E-46 |
MS.gene057148 | MS.gene059026 | 0.844215 | 8.68E-59 | -1.69E-46 |
MS.gene057986 | MS.gene059026 | 0.822796 | 1.96E-53 | -1.69E-46 |
MS.gene059026 | MS.gene064665 | 0.802069 | 6.68E-49 | -1.69E-46 |
MS.gene059026 | MS.gene066565 | 0.812161 | 4.87E-51 | -1.69E-46 |
MS.gene059026 | MS.gene067785 | -0.80185 | 7.41E-49 | -1.69E-46 |
MS.gene059026 | MS.gene069575 | 0.804113 | 2.52E-49 | -1.69E-46 |
MS.gene059026 | MS.gene071901 | 0.808454 | 3.07E-50 | -1.69E-46 |
MS.gene059026 | MS.gene07349 | 0.811757 | 5.97E-51 | -1.69E-46 |
MS.gene059026 | MS.gene07361 | -0.810491 | 1.12E-50 | -1.69E-46 |
MS.gene059026 | MS.gene07362 | -0.811039 | 8.55E-51 | -1.69E-46 |
MS.gene059026 | MS.gene07870 | -0.834554 | 2.80E-56 | -1.69E-46 |
MS.gene059026 | MS.gene20919 | 0.871753 | 5.37E-67 | -1.69E-46 |
MS.gene059026 | MS.gene21128 | 0.853528 | 2.25E-61 | -1.69E-46 |
MS.gene059026 | MS.gene21237 | -0.804472 | 2.13E-49 | -1.69E-46 |
MS.gene059026 | MS.gene22377 | 0.848737 | 5.07E-60 | -1.69E-46 |
MS.gene059026 | MS.gene22670 | 0.840735 | 7.27E-58 | -1.69E-46 |
MS.gene059026 | MS.gene28072 | -0.810061 | 1.39E-50 | -1.69E-46 |
MS.gene059026 | MS.gene29374 | 0.823574 | 1.29E-53 | -1.69E-46 |
MS.gene059026 | MS.gene33472 | 0.853474 | 2.33E-61 | -1.69E-46 |
MS.gene059026 | MS.gene38719 | 0.838468 | 2.82E-57 | -1.69E-46 |
MS.gene059026 | MS.gene39914 | 0.852907 | 3.39E-61 | -1.69E-46 |
MS.gene059026 | MS.gene40100 | 0.819677 | 1.02E-52 | -1.69E-46 |
MS.gene059026 | MS.gene40252 | 0.827672 | 1.37E-54 | -1.69E-46 |
MS.gene059026 | MS.gene40702 | 0.811845 | 5.71E-51 | -1.69E-46 |
MS.gene059026 | MS.gene44543 | 0.83192 | 1.27E-55 | -1.69E-46 |
MS.gene059026 | MS.gene46401 | 0.80888 | 2.49E-50 | -1.69E-46 |
MS.gene059026 | MS.gene47475 | 0.812477 | 4.16E-51 | -1.69E-46 |
MS.gene059026 | MS.gene47809 | 0.817284 | 3.57E-52 | -1.69E-46 |
MS.gene059026 | MS.gene48276 | 0.839924 | 1.18E-57 | -1.69E-46 |
MS.gene059026 | MS.gene51143 | 0.826823 | 2.20E-54 | -1.69E-46 |
MS.gene059026 | MS.gene51935 | -0.801975 | 6.99E-49 | -1.69E-46 |
MS.gene059026 | MS.gene52740 | -0.80107 | 1.07E-48 | -1.69E-46 |
MS.gene059026 | MS.gene55685 | 0.812303 | 4.54E-51 | -1.69E-46 |
MS.gene059026 | MS.gene55785 | 0.814168 | 1.77E-51 | -1.69E-46 |
MS.gene059026 | MS.gene60366 | 0.833583 | 4.91E-56 | -1.69E-46 |
MS.gene059026 | MS.gene62058 | 0.824461 | 7.97E-54 | -1.69E-46 |
MS.gene059026 | MS.gene63951 | 0.809584 | 1.76E-50 | -1.69E-46 |
MS.gene059026 | MS.gene68124 | 0.832855 | 7.45E-56 | -1.69E-46 |
MS.gene059026 | MS.gene68126 | 0.81291 | 3.34E-51 | -1.69E-46 |
MS.gene059026 | MS.gene68617 | -0.808244 | 3.41E-50 | -1.69E-46 |
MS.gene059026 | MS.gene69734 | 0.828794 | 7.37E-55 | -1.69E-46 |
MS.gene059026 | MS.gene71742 | 0.83435 | 3.15E-56 | -1.69E-46 |
MS.gene059026 | MS.gene71891 | 0.868733 | 5.24E-66 | -1.69E-46 |
MS.gene059026 | MS.gene72019 | 0.829436 | 5.15E-55 | -1.69E-46 |
MS.gene059026 | MS.gene73461 | 0.837713 | 4.42E-57 | -1.69E-46 |
MS.gene059026 | MS.gene73783 | 0.850913 | 1.25E-60 | -1.69E-46 |
MS.gene059026 | MS.gene75415 | 0.84917 | 3.84E-60 | -1.69E-46 |
MS.gene059026 | MS.gene75417 | 0.846087 | 2.71E-59 | -1.69E-46 |
MS.gene059026 | MS.gene76503 | 0.816122 | 6.51E-52 | -1.69E-46 |
MS.gene059026 | MS.gene77384 | 0.852673 | 3.96E-61 | -1.69E-46 |
MS.gene059026 | MS.gene85119 | 0.822452 | 2.35E-53 | -1.69E-46 |
MS.gene059026 | MS.gene89091 | 0.814372 | 1.59E-51 | -1.69E-46 |
MS.gene059026 | MS.gene90786 | 0.848026 | 7.96E-60 | -1.69E-46 |
MS.gene059026 | MS.gene93967 | 0.801725 | 7.86E-49 | -1.69E-46 |
MS.gene059026 | MS.gene95037 | 0.808945 | 2.41E-50 | -1.69E-46 |
MS.gene059026 | MS.gene95638 | 0.846647 | 1.90E-59 | -1.69E-46 |
MS.gene059026 | MS.gene97731 | 0.840716 | 7.35E-58 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059026.t1 | MTR_1g069255 | 95.213 | 188 | 7 | 2 | 1 | 187 | 1 | 187 | 1.25e-109 | 311 |
MS.gene059026.t1 | MTR_3g077570 | 50.000 | 96 | 47 | 1 | 87 | 182 | 22 | 116 | 2.86e-26 | 97.4 |
MS.gene059026.t1 | MTR_7g035245 | 52.083 | 96 | 45 | 1 | 87 | 182 | 7 | 101 | 8.40e-26 | 95.9 |
MS.gene059026.t1 | MTR_3g077560 | 47.000 | 100 | 50 | 2 | 87 | 184 | 25 | 123 | 3.36e-25 | 95.1 |
MS.gene059026.t1 | MTR_2g038560 | 40.385 | 104 | 61 | 1 | 74 | 177 | 63 | 165 | 2.98e-23 | 91.3 |
MS.gene059026.t1 | MTR_2g038560 | 40.385 | 104 | 61 | 1 | 74 | 177 | 19 | 121 | 3.15e-23 | 90.1 |
MS.gene059026.t1 | MTR_2g038560 | 40.385 | 104 | 61 | 1 | 74 | 177 | 60 | 162 | 3.61e-23 | 90.9 |
MS.gene059026.t1 | MTR_5g021090 | 42.391 | 92 | 52 | 1 | 86 | 177 | 36 | 126 | 1.96e-20 | 82.8 |
MS.gene059026.t1 | MTR_4g119050 | 39.000 | 100 | 59 | 2 | 84 | 182 | 2 | 100 | 2.50e-16 | 71.2 |
MS.gene059026.t1 | MTR_4g119030 | 39.000 | 100 | 59 | 2 | 84 | 182 | 2 | 100 | 2.50e-16 | 71.2 |
MS.gene059026.t1 | MTR_4g119040 | 39.000 | 100 | 59 | 2 | 84 | 182 | 2 | 100 | 2.50e-16 | 71.2 |
MS.gene059026.t1 | MTR_7g108200 | 36.170 | 94 | 59 | 1 | 84 | 177 | 2 | 94 | 1.65e-15 | 69.3 |
MS.gene059026.t1 | MTR_1g088905 | 37.374 | 99 | 61 | 1 | 84 | 182 | 2 | 99 | 2.40e-15 | 68.6 |
MS.gene059026.t1 | MTR_7g022690 | 39.000 | 100 | 59 | 2 | 84 | 182 | 31 | 129 | 4.97e-15 | 68.6 |
MS.gene059026.t1 | MTR_1g088910 | 34.343 | 99 | 64 | 1 | 84 | 182 | 2 | 99 | 4.99e-15 | 67.8 |
MS.gene059026.t1 | MTR_7g022550 | 38.000 | 100 | 60 | 2 | 84 | 182 | 31 | 129 | 6.34e-15 | 68.6 |
MS.gene059026.t1 | MTR_7g108260 | 41.573 | 89 | 51 | 1 | 94 | 182 | 12 | 99 | 1.05e-14 | 67.0 |
MS.gene059026.t1 | MTR_2g019900 | 36.364 | 99 | 62 | 1 | 84 | 182 | 2 | 99 | 1.28e-14 | 67.0 |
MS.gene059026.t1 | MTR_7g026770 | 41.000 | 100 | 57 | 2 | 84 | 182 | 23 | 121 | 1.44e-14 | 70.5 |
MS.gene059026.t1 | MTR_1g088925 | 32.979 | 94 | 62 | 1 | 84 | 177 | 2 | 94 | 1.27e-13 | 64.3 |
MS.gene059026.t1 | MTR_2g019950 | 36.364 | 99 | 62 | 1 | 84 | 182 | 2 | 99 | 1.37e-13 | 64.3 |
MS.gene059026.t1 | MTR_1g088920 | 32.979 | 94 | 62 | 1 | 84 | 177 | 2 | 94 | 1.77e-13 | 63.9 |
MS.gene059026.t1 | MTR_7g022710 | 37.000 | 100 | 61 | 2 | 84 | 182 | 31 | 129 | 2.63e-13 | 64.3 |
MS.gene059026.t1 | MTR_7g108250 | 35.354 | 99 | 63 | 1 | 84 | 182 | 2 | 99 | 5.19e-13 | 62.8 |
MS.gene059026.t1 | MTR_7g108220 | 34.000 | 100 | 64 | 2 | 84 | 182 | 2 | 100 | 3.68e-12 | 60.5 |
MS.gene059026.t1 | MTR_7g108210 | 34.000 | 100 | 64 | 2 | 84 | 182 | 2 | 100 | 2.00e-11 | 58.5 |
MS.gene059026.t1 | MTR_1g088895 | 32.292 | 96 | 64 | 1 | 85 | 180 | 3 | 97 | 4.02e-11 | 57.8 |
MS.gene059026.t1 | MTR_2g090755 | 35.000 | 100 | 65 | 0 | 83 | 182 | 38 | 137 | 8.74e-11 | 57.8 |
MS.gene059026.t1 | MTR_2g048970 | 33.981 | 103 | 63 | 2 | 84 | 182 | 29 | 130 | 9.75e-11 | 57.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene059026.t1 | AT4G28730 | 73.832 | 107 | 28 | 0 | 78 | 184 | 65 | 171 | 2.06e-60 | 186 |
MS.gene059026.t1 | AT2G20270 | 70.874 | 103 | 30 | 0 | 82 | 184 | 74 | 176 | 2.99e-52 | 165 |
MS.gene059026.t1 | AT2G20270 | 56.154 | 130 | 30 | 1 | 82 | 184 | 74 | 203 | 6.78e-46 | 150 |
MS.gene059026.t1 | AT4G28730 | 75.000 | 76 | 19 | 0 | 78 | 153 | 65 | 140 | 4.83e-42 | 138 |
MS.gene059026.t1 | AT5G63030 | 50.000 | 96 | 47 | 1 | 87 | 182 | 23 | 117 | 5.29e-25 | 94.4 |
MS.gene059026.t1 | AT5G20500 | 40.476 | 126 | 60 | 3 | 60 | 185 | 21 | 131 | 8.53e-25 | 94.4 |
MS.gene059026.t1 | AT5G40370 | 50.000 | 96 | 47 | 1 | 87 | 182 | 7 | 101 | 2.32e-24 | 92.4 |
MS.gene059026.t1 | AT5G40370 | 50.000 | 86 | 42 | 1 | 97 | 182 | 42 | 126 | 2.95e-20 | 82.4 |
MS.gene059026.t1 | AT1G77370 | 39.785 | 93 | 55 | 1 | 86 | 178 | 37 | 128 | 9.63e-20 | 80.9 |
MS.gene059026.t1 | AT2G47870 | 35.789 | 95 | 59 | 2 | 84 | 177 | 2 | 95 | 8.94e-19 | 77.8 |
MS.gene059026.t1 | AT1G77370 | 32.203 | 118 | 55 | 1 | 86 | 178 | 37 | 154 | 8.10e-17 | 73.9 |
MS.gene059026.t1 | AT3G62950 | 34.000 | 100 | 64 | 2 | 84 | 182 | 2 | 100 | 2.23e-16 | 71.6 |
MS.gene059026.t1 | AT5G18600 | 37.374 | 99 | 61 | 1 | 84 | 182 | 2 | 99 | 1.13e-15 | 69.7 |
MS.gene059026.t1 | AT4G15700 | 35.354 | 99 | 63 | 1 | 84 | 182 | 2 | 99 | 3.30e-14 | 65.9 |
MS.gene059026.t1 | AT3G21460 | 34.021 | 97 | 63 | 1 | 84 | 180 | 2 | 97 | 1.16e-13 | 64.3 |
MS.gene059026.t1 | AT1G03020 | 36.364 | 99 | 62 | 1 | 84 | 182 | 2 | 99 | 1.21e-13 | 64.3 |
MS.gene059026.t1 | AT4G15690 | 34.343 | 99 | 64 | 1 | 84 | 182 | 2 | 99 | 2.68e-13 | 63.5 |
MS.gene059026.t1 | AT5G14070 | 34.286 | 105 | 60 | 2 | 86 | 182 | 34 | 137 | 3.88e-13 | 63.9 |
MS.gene059026.t1 | AT4G15660 | 36.471 | 85 | 53 | 1 | 84 | 168 | 2 | 85 | 9.01e-13 | 62.0 |
MS.gene059026.t1 | AT3G62930 | 34.343 | 99 | 64 | 1 | 84 | 182 | 2 | 99 | 1.51e-12 | 61.6 |
MS.gene059026.t1 | AT4G15680 | 32.323 | 99 | 66 | 1 | 84 | 182 | 2 | 99 | 1.59e-12 | 61.2 |
MS.gene059026.t1 | AT4G15670 | 35.294 | 85 | 54 | 1 | 84 | 168 | 2 | 85 | 1.94e-12 | 61.2 |
MS.gene059026.t1 | AT3G62960 | 34.483 | 87 | 56 | 1 | 91 | 177 | 9 | 94 | 8.64e-12 | 59.3 |
MS.gene059026.t1 | AT2G30540 | 35.632 | 87 | 55 | 1 | 91 | 177 | 9 | 94 | 3.34e-11 | 57.8 |
Find 49 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCACAATTGCAGAAGTTAT+TGG | 0.236945 | 1.2:-52069305 | MS.gene059026:CDS |
ACTGTCCCAAATGTCTTTAT+TGG | 0.269990 | 1.2:-52069262 | MS.gene059026:intron |
TGCTTACCAATAAAGACATT+TGG | 0.309384 | 1.2:+52069256 | None:intergenic |
GGTCATTGAATTGGACGAAT+TGG | 0.311156 | 1.2:-52069433 | MS.gene059026:CDS |
TCTTCTTCTTCTCCTTCTTT+CGG | 0.329684 | 1.2:-52069582 | MS.gene059026:CDS |
TCAACCATTGGTCATTGAAT+TGG | 0.339849 | 1.2:-52069442 | MS.gene059026:CDS |
ATGGGTGAAGGAGTGGAAAT+GGG | 0.349172 | 1.2:+52069687 | None:intergenic |
GATGGGTGAAGGAGTGGAAA+TGG | 0.372694 | 1.2:+52069686 | None:intergenic |
GCTTACCAATAAAGACATTT+GGG | 0.379345 | 1.2:+52069257 | None:intergenic |
GATTTAGAATAAACAACAAC+AGG | 0.399918 | 1.2:+52069516 | None:intergenic |
TCCAATAACTTCTGCAATTG+TGG | 0.404965 | 1.2:+52069304 | None:intergenic |
GTCATTGAATTGGACGAATT+GGG | 0.409560 | 1.2:-52069432 | MS.gene059026:intron |
GGTGTAGAAAGTGAAAATTT+TGG | 0.420415 | 1.2:+52069710 | None:intergenic |
AGACATTTGGGACAGTGTAT+TGG | 0.422317 | 1.2:+52069269 | None:intergenic |
CAACACATTGGTGGCTGTAC+AGG | 0.429960 | 1.2:-52067337 | MS.gene059026:intron |
TTGTTGTTTATTCTAAATCC+TGG | 0.449421 | 1.2:-52069512 | MS.gene059026:CDS |
GTGAATAATGGCTTCATCAA+TGG | 0.451455 | 1.2:-52069802 | None:intergenic |
CAGATACACTTAAGCTGTAC+AGG | 0.473714 | 1.2:-52066838 | MS.gene059026:CDS |
TCGAGACGAGAGCCGAAAGA+AGG | 0.476392 | 1.2:+52069570 | None:intergenic |
CTTCTGATAGCAGAGTTTCA+AGG | 0.477656 | 1.2:+52066807 | None:intergenic |
TGATGCATTGGTGATGATGA+TGG | 0.500169 | 1.2:+52069668 | None:intergenic |
GGAGAAGAAGAAGAGGGAGA+AGG | 0.503916 | 1.2:+52069591 | None:intergenic |
AGACATGGCTCGAGGGAAAG+TGG | 0.505541 | 1.2:+52069632 | None:intergenic |
TTCTGCAATTGTGGACCTTG+TGG | 0.506196 | 1.2:+52069313 | None:intergenic |
CTCAGAGCAATAAGAGCACC+AGG | 0.519483 | 1.2:+52069494 | None:intergenic |
AAGTTATTGGAAAGAATCAC+TGG | 0.522538 | 1.2:-52069292 | MS.gene059026:CDS |
GAAAGAAGGAGAAGAAGAAG+AGG | 0.525353 | 1.2:+52069584 | None:intergenic |
TGGGTGAAGGAGTGGAAATG+GGG | 0.529038 | 1.2:+52069688 | None:intergenic |
ATTGCAGGTGGCCAACACAT+TGG | 0.560668 | 1.2:-52067349 | MS.gene059026:intron |
TGCGCGGCGTGATGATGCAT+TGG | 0.565062 | 1.2:+52069656 | None:intergenic |
GATGATGATGGGTGAAGGAG+TGG | 0.565535 | 1.2:+52069680 | None:intergenic |
GACATGGCTCGAGGGAAAGT+GGG | 0.576041 | 1.2:+52069633 | None:intergenic |
GAAACTCGGTACTCAACCAT+TGG | 0.578067 | 1.2:-52069454 | MS.gene059026:CDS |
TCGTCCAATTCAATGACCAA+TGG | 0.582756 | 1.2:+52069438 | None:intergenic |
CTCGAGGGAAAGTGGGTGCG+CGG | 0.586414 | 1.2:+52069640 | None:intergenic |
AAAGAAGGAGAAGAAGAAGA+GGG | 0.596305 | 1.2:+52069585 | None:intergenic |
GGGTGAAGGAGTGGAAATGG+GGG | 0.597848 | 1.2:+52069689 | None:intergenic |
ACACTTAAGCTGTACAGGAA+AGG | 0.605615 | 1.2:-52066833 | MS.gene059026:CDS |
AAATCCTTGTTCAAGAAACT+CGG | 0.607350 | 1.2:-52069468 | MS.gene059026:CDS |
AGTACCGAGTTTCTTGAACA+AGG | 0.611087 | 1.2:+52069464 | None:intergenic |
GCAGGTGGCCAACACATTGG+TGG | 0.613270 | 1.2:-52067346 | MS.gene059026:intron |
AAGAAGAAGACATGGCTCGA+GGG | 0.614920 | 1.2:+52069625 | None:intergenic |
GAAGAAGAAGACATGGCTCG+AGG | 0.618686 | 1.2:+52069624 | None:intergenic |
TTTCTGTGTTTAGGTCCACA+AGG | 0.618825 | 1.2:-52069328 | MS.gene059026:intron |
CTGGTGCTCTTATTGCTCTG+AGG | 0.633125 | 1.2:-52069493 | MS.gene059026:CDS |
GATGCATTGGTGATGATGAT+GGG | 0.639376 | 1.2:+52069669 | None:intergenic |
TTGGTGATGATGATGGGTGA+AGG | 0.644107 | 1.2:+52069675 | None:intergenic |
CTGTACAGCCACCAATGTGT+TGG | 0.647816 | 1.2:+52067338 | None:intergenic |
ATTTAGAATAAACAACAACA+GGG | 0.680559 | 1.2:+52069517 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTAAAACTTTCTTTTTT+TGG | - | chr1.2:52068963-52068982 | MS.gene059026:intron | 10.0% |
!! | AAAAGATAAAATTAAATGCA+GGG | + | chr1.2:52069169-52069188 | None:intergenic | 15.0% |
!! | AATAAATTGAAAAAAGCTTA+AGG | - | chr1.2:52067709-52067728 | MS.gene059026:intron | 15.0% |
!! | CAAATATAGTAATATTACAT+TGG | - | chr1.2:52068895-52068914 | MS.gene059026:intron | 15.0% |
!! | TGAAAATTATACGATATATA+GGG | - | chr1.2:52067911-52067930 | MS.gene059026:intron | 15.0% |
!! | TTGAAAATTATACGATATAT+AGG | - | chr1.2:52067910-52067929 | MS.gene059026:intron | 15.0% |
!! | TTGGATAAAAAAGTTTAATT+AGG | - | chr1.2:52067589-52067608 | MS.gene059026:intron | 15.0% |
!!! | ATTTAAAATTTAGGTTTTTG+TGG | + | chr1.2:52068266-52068285 | None:intergenic | 15.0% |
!! | AAGAATTGAAATACTATATC+AGG | + | chr1.2:52068805-52068824 | None:intergenic | 20.0% |
!! | AATATAAGGGTAATGTTAAT+TGG | - | chr1.2:52068847-52068866 | MS.gene059026:intron | 20.0% |
!! | AATGATTGATTATTTAACTG+GGG | - | chr1.2:52069286-52069305 | MS.gene059026:CDS | 20.0% |
!! | CAAAAGATAAAATTAAATGC+AGG | + | chr1.2:52069170-52069189 | None:intergenic | 20.0% |
!! | GAAATCCAACTTAAAAAATT+AGG | - | chr1.2:52068735-52068754 | MS.gene059026:intron | 20.0% |
!! | GAATGATTGATTATTTAACT+GGG | - | chr1.2:52069285-52069304 | MS.gene059026:CDS | 20.0% |
!! | TAGGATTAATATTTGACAAA+AGG | + | chr1.2:52067545-52067564 | None:intergenic | 20.0% |
!! | TGAATGATTGATTATTTAAC+TGG | - | chr1.2:52069284-52069303 | MS.gene059026:CDS | 20.0% |
!! | TTATATTAATCCATAGTTCA+AGG | + | chr1.2:52068834-52068853 | None:intergenic | 20.0% |
!!! | ATTTAGAATAAACAACAACA+GGG | + | chr1.2:52067062-52067081 | None:intergenic | 20.0% |
!!! | TAAACTTTTTTATCCAAACA+AGG | + | chr1.2:52067586-52067605 | None:intergenic | 20.0% |
!!! | TGAACTATGGATTAATATAA+GGG | - | chr1.2:52068834-52068853 | MS.gene059026:intron | 20.0% |
!!! | TTGAACTATGGATTAATATA+AGG | - | chr1.2:52068833-52068852 | MS.gene059026:intron | 20.0% |
!!! | TTTCACTGTTAAGATTTTTA+TGG | + | chr1.2:52069672-52069691 | None:intergenic | 20.0% |
! | AAAACATTGCATTGGAAATT+AGG | + | chr1.2:52068518-52068537 | None:intergenic | 25.0% |
! | AAAATAATGAGGGAAACAAA+AGG | + | chr1.2:52069710-52069729 | None:intergenic | 25.0% |
! | AGCAATAATTGAGGTTAATT+AGG | + | chr1.2:52067183-52067202 | None:intergenic | 25.0% |
! | ATCCATGAATAAATTTGCAA+TGG | + | chr1.2:52067208-52067227 | None:intergenic | 25.0% |
! | ATGATTGATTATTTAACTGG+GGG | - | chr1.2:52069287-52069306 | MS.gene059026:CDS | 25.0% |
! | GATATATAAGTAGTACTTCT+GGG | - | chr1.2:52067933-52067952 | MS.gene059026:intron | 25.0% |
! | GCAATAATTGAGGTTAATTA+GGG | + | chr1.2:52067182-52067201 | None:intergenic | 25.0% |
! | TAACCATTTAAATCCTCTTA+TGG | - | chr1.2:52069499-52069518 | MS.gene059026:CDS | 25.0% |
! | TGACAAATATCATTTCTGTT+TGG | - | chr1.2:52069608-52069627 | MS.gene059026:CDS | 25.0% |
! | TGATTAGGTTATCATAACTT+AGG | - | chr1.2:52067827-52067846 | MS.gene059026:intron | 25.0% |
! | TGCACAAGTAAAAATAATGA+GGG | + | chr1.2:52069720-52069739 | None:intergenic | 25.0% |
! | TTAATCCTAATTTAAACCCA+AGG | - | chr1.2:52067556-52067575 | MS.gene059026:intron | 25.0% |
! | TTAGAAATCATTAGATCCAA+AGG | - | chr1.2:52068432-52068451 | MS.gene059026:intron | 25.0% |
!! | ACGTGAAGCATTTAAAATTT+AGG | + | chr1.2:52068275-52068294 | None:intergenic | 25.0% |
!! | CTTAATTGATTTCTGTGTTT+AGG | - | chr1.2:52067239-52067258 | MS.gene059026:intron | 25.0% |
!! | GATTTAGAATAAACAACAAC+AGG | + | chr1.2:52067063-52067082 | None:intergenic | 25.0% |
!!! | ATATTTTAGTCATGCTGATT+AGG | - | chr1.2:52067812-52067831 | MS.gene059026:intron | 25.0% |
!!! | TTGTTGTTTATTCTAAATCC+TGG | - | chr1.2:52067064-52067083 | MS.gene059026:intron | 25.0% |
AAATCCTTGTTCAAGAAACT+CGG | - | chr1.2:52067108-52067127 | MS.gene059026:intron | 30.0% | |
AAGCTGTTGCTAAAAATAAG+GGG | - | chr1.2:52069789-52069808 | MS.gene059026:CDS | 30.0% | |
AAGTTATCATGTAGAGCTTA+TGG | - | chr1.2:52067685-52067704 | MS.gene059026:intron | 30.0% | |
AAGTTATTGGAAAGAATCAC+TGG | - | chr1.2:52067284-52067303 | MS.gene059026:intron | 30.0% | |
ACTCCAATACATGTAATTGT+AGG | - | chr1.2:52068705-52068724 | MS.gene059026:intron | 30.0% | |
AGAAGCTGTTGCTAAAAATA+AGG | - | chr1.2:52069787-52069806 | MS.gene059026:CDS | 30.0% | |
AGAGGATTTAAATGGTTAAC+TGG | + | chr1.2:52069497-52069516 | None:intergenic | 30.0% | |
ATAGCAAGAGAAATTTCATC+TGG | - | chr1.2:52068083-52068102 | MS.gene059026:intron | 30.0% | |
ATGAAGAAGAAGAAGAAGAA+TGG | + | chr1.2:52066837-52066856 | None:intergenic | 30.0% | |
ATGATATTTGTCACAATGAG+AGG | + | chr1.2:52069601-52069620 | None:intergenic | 30.0% | |
ATGCAGACAATTTACATTTG+CGG | + | chr1.2:52069419-52069438 | None:intergenic | 30.0% | |
ATTGAAAAAAGCTTAAGGAC+AGG | - | chr1.2:52067714-52067733 | MS.gene059026:intron | 30.0% | |
CTGCAATGAAGAAAACTTTA+GGG | + | chr1.2:52069214-52069233 | None:intergenic | 30.0% | |
CTGCACAAGTAAAAATAATG+AGG | + | chr1.2:52069721-52069740 | None:intergenic | 30.0% | |
GAAGCTGTTGCTAAAAATAA+GGG | - | chr1.2:52069788-52069807 | MS.gene059026:CDS | 30.0% | |
GATATACGTTCTTTACAGAA+AGG | + | chr1.2:52068679-52068698 | None:intergenic | 30.0% | |
GCTTACCAATAAAGACATTT+GGG | + | chr1.2:52067322-52067341 | None:intergenic | 30.0% | |
GGATATATAAGTAGTACTTC+TGG | - | chr1.2:52067932-52067951 | MS.gene059026:intron | 30.0% | |
GTTGTCTAAAAACATTGCAT+TGG | + | chr1.2:52068526-52068545 | None:intergenic | 30.0% | |
TAGCAAGAGAAATTTCATCT+GGG | - | chr1.2:52068084-52068103 | MS.gene059026:intron | 30.0% | |
TATTCCATCATCTTATCTAC+TGG | + | chr1.2:52067766-52067785 | None:intergenic | 30.0% | |
TGATAAGCGCTTATACTATA+TGG | + | chr1.2:52067616-52067635 | None:intergenic | 30.0% | |
TGATTGAGAGTGGTTATATT+AGG | - | chr1.2:52067877-52067896 | MS.gene059026:intron | 30.0% | |
TGATTGATTATTTAACTGGG+GGG | - | chr1.2:52069288-52069307 | MS.gene059026:CDS | 30.0% | |
TGCAAACATAGAAATGAAGA+GGG | + | chr1.2:52068568-52068587 | None:intergenic | 30.0% | |
TGCCATTGCAAATTTATTCA+TGG | - | chr1.2:52067203-52067222 | MS.gene059026:intron | 30.0% | |
TGCTTACCAATAAAGACATT+TGG | + | chr1.2:52067323-52067342 | None:intergenic | 30.0% | |
TTACGTTTACATCCAATGAT+GGG | + | chr1.2:52067454-52067473 | None:intergenic | 30.0% | |
TTAGACAACTAAATTTCCCA+GGG | - | chr1.2:52068537-52068556 | MS.gene059026:intron | 30.0% | |
TTGCAAACATAGAAATGAAG+AGG | + | chr1.2:52068569-52068588 | None:intergenic | 30.0% | |
TTTACACATATATGCTTTGC+CGG | - | chr1.2:52067395-52067414 | MS.gene059026:intron | 30.0% | |
TTTACGTTTACATCCAATGA+TGG | + | chr1.2:52067455-52067474 | None:intergenic | 30.0% | |
TTTAGACAACTAAATTTCCC+AGG | - | chr1.2:52068536-52068555 | MS.gene059026:intron | 30.0% | |
! | AGGAGGAACTTTTGAATATT+TGG | - | chr1.2:52068208-52068227 | MS.gene059026:intron | 30.0% |
! | ATTGAATCTGAAACACATAC+CGG | + | chr1.2:52067417-52067436 | None:intergenic | 30.0% |
! | GGTGTAGAAAGTGAAAATTT+TGG | + | chr1.2:52066869-52066888 | None:intergenic | 30.0% |
! | TACATGCATAACTGATAATG+TGG | + | chr1.2:52069562-52069581 | None:intergenic | 30.0% |
!! | AGTGAAAATTTTGGAGATAG+AGG | + | chr1.2:52066860-52066879 | None:intergenic | 30.0% |
!! | GTAACAGACTTATGTTGTTT+TGG | + | chr1.2:52069147-52069166 | None:intergenic | 30.0% |
!!! | AAACTCTTTTGAAACAACCA+CGG | - | chr1.2:52068165-52068184 | MS.gene059026:intron | 30.0% |
!!! | TGTGGCCTAATTTTTTAAGT+TGG | + | chr1.2:52068743-52068762 | None:intergenic | 30.0% |
AAACTTTCTGCGATTGTGAA+TGG | + | chr1.2:52068770-52068789 | None:intergenic | 35.0% | |
AAAGAAGGAGAAGAAGAAGA+GGG | + | chr1.2:52066994-52067013 | None:intergenic | 35.0% | |
AATGGCAATGACAATGACAA+TGG | + | chr1.2:52068479-52068498 | None:intergenic | 35.0% | |
ACATTGCATTGGAAATTAGG+TGG | + | chr1.2:52068515-52068534 | None:intergenic | 35.0% | |
ACTGTCCCAAATGTCTTTAT+TGG | - | chr1.2:52067314-52067333 | MS.gene059026:intron | 35.0% | |
ATTGATTATTTAACTGGGGG+GGG | - | chr1.2:52069290-52069309 | MS.gene059026:CDS | 35.0% | |
CAACACTTGTATCAAACTCT+TGG | + | chr1.2:52068401-52068420 | None:intergenic | 35.0% | |
CAGCCATAAGAGGATTTAAA+TGG | + | chr1.2:52069505-52069524 | None:intergenic | 35.0% | |
CATTTAAATCCTCTTATGGC+TGG | - | chr1.2:52069503-52069522 | MS.gene059026:CDS | 35.0% | |
CCTGCAATGAAGAAAACTTT+AGG | + | chr1.2:52069215-52069234 | None:intergenic | 35.0% | |
GAAACAAAAGGAGAAGACAA+AGG | + | chr1.2:52069698-52069717 | None:intergenic | 35.0% | |
GAGCCTACAATTACATGTAT+TGG | + | chr1.2:52068711-52068730 | None:intergenic | 35.0% | |
GATCTCTACTATTTGCACAT+GGG | - | chr1.2:52068609-52068628 | MS.gene059026:intron | 35.0% | |
GATTGATTATTTAACTGGGG+GGG | - | chr1.2:52069289-52069308 | MS.gene059026:CDS | 35.0% | |
GTCATTGAATTGGACGAATT+GGG | - | chr1.2:52067144-52067163 | MS.gene059026:intron | 35.0% | |
GTGTTCCTTGGGTTTAAATT+AGG | + | chr1.2:52067564-52067583 | None:intergenic | 35.0% | |
TAATCCATAGTTCAAGGCAT+GGG | + | chr1.2:52068828-52068847 | None:intergenic | 35.0% | |
TATGCCAGTAGATAAGATGA+TGG | - | chr1.2:52067759-52067778 | MS.gene059026:intron | 35.0% | |
TCAACCATTGGTCATTGAAT+TGG | - | chr1.2:52067134-52067153 | MS.gene059026:intron | 35.0% | |
TCATTGTTAGCAAATAGCTG+AGG | - | chr1.2:52068297-52068316 | MS.gene059026:intron | 35.0% | |
TCCAATAACTTCTGCAATTG+TGG | + | chr1.2:52067275-52067294 | None:intergenic | 35.0% | |
TCCACAATTGCAGAAGTTAT+TGG | - | chr1.2:52067271-52067290 | MS.gene059026:intron | 35.0% | |
TCCTCCTTAACAAACTCATT+GGG | + | chr1.2:52068195-52068214 | None:intergenic | 35.0% | |
TCTTCTTCTTCTCCTTCTTT+CGG | - | chr1.2:52066994-52067013 | MS.gene059026:intron | 35.0% | |
TGAAGAAGAAGAAGAAGACA+TGG | + | chr1.2:52066962-52066981 | None:intergenic | 35.0% | |
TGAGAGTGGTTATATTAGGT+AGG | - | chr1.2:52067881-52067900 | MS.gene059026:intron | 35.0% | |
TTAATCCATAGTTCAAGGCA+TGG | + | chr1.2:52068829-52068848 | None:intergenic | 35.0% | |
TTCCTCCTTAACAAACTCAT+TGG | + | chr1.2:52068196-52068215 | None:intergenic | 35.0% | |
! | AAAGTTTTCTTCATTGCAGG+TGG | - | chr1.2:52069215-52069234 | MS.gene059026:intron | 35.0% |
! | AATCATTCAACAAGAGCACA+AGG | + | chr1.2:52069273-52069292 | None:intergenic | 35.0% |
! | CCTAAAGTTTTCTTCATTGC+AGG | - | chr1.2:52069212-52069231 | MS.gene059026:intron | 35.0% |
! | TATCGCGATAATTTGTCTCA+CGG | - | chr1.2:52069468-52069487 | MS.gene059026:CDS | 35.0% |
! | TGATACAAGTGTTGCATTGA+AGG | - | chr1.2:52068407-52068426 | MS.gene059026:intron | 35.0% |
! | TTAACATTTTCTCCTTCTCC+CGG | + | chr1.2:52069068-52069087 | None:intergenic | 35.0% |
!! | GTTTCCCAATGAGTTTGTTA+AGG | - | chr1.2:52068188-52068207 | MS.gene059026:intron | 35.0% |
!! | TTGAGAAACGGTGTTTTTGA+TGG | + | chr1.2:52067037-52067056 | None:intergenic | 35.0% |
!!! | AACAACAGGGTTTTGAGAAA+CGG | + | chr1.2:52067049-52067068 | None:intergenic | 35.0% |
!!! | AACTCTTTTGAAACAACCAC+GGG | - | chr1.2:52068166-52068185 | MS.gene059026:intron | 35.0% |
AAACTCTTGGAGGATACTTG+GGG | + | chr1.2:52068388-52068407 | None:intergenic | 40.0% | |
AAATTAGGTGGCAATGGCAA+TGG | + | chr1.2:52068503-52068522 | None:intergenic | 40.0% | |
ACACTTAAGCTGTACAGGAA+AGG | - | chr1.2:52069743-52069762 | MS.gene059026:CDS | 40.0% | |
ATGCATGTATGACGCTTTCA+TGG | - | chr1.2:52069573-52069592 | MS.gene059026:CDS | 40.0% | |
CAAACTCTTGGAGGATACTT+GGG | + | chr1.2:52068389-52068408 | None:intergenic | 40.0% | |
CACTTGTATCAAACTCTTGG+AGG | + | chr1.2:52068398-52068417 | None:intergenic | 40.0% | |
CAGATACACTTAAGCTGTAC+AGG | - | chr1.2:52069738-52069757 | MS.gene059026:CDS | 40.0% | |
CATTGGAAATTAGGTGGCAA+TGG | + | chr1.2:52068509-52068528 | None:intergenic | 40.0% | |
CGATCTCTACTATTTGCACA+TGG | - | chr1.2:52068608-52068627 | MS.gene059026:intron | 40.0% | |
CTTCTGATAGCAGAGTTTCA+AGG | + | chr1.2:52069772-52069791 | None:intergenic | 40.0% | |
GAAAGAAGGAGAAGAAGAAG+AGG | + | chr1.2:52066995-52067014 | None:intergenic | 40.0% | |
GAATAATGCTTCAGTCACTG+AGG | + | chr1.2:52069349-52069368 | None:intergenic | 40.0% | |
GCAATGGCAAGCAATAATTG+AGG | + | chr1.2:52067192-52067211 | None:intergenic | 40.0% | |
GGTCATTGAATTGGACGAAT+TGG | - | chr1.2:52067143-52067162 | MS.gene059026:intron | 40.0% | |
TCAAACTCTTGGAGGATACT+TGG | + | chr1.2:52068390-52068409 | None:intergenic | 40.0% | |
TCGTCCAATTCAATGACCAA+TGG | + | chr1.2:52067141-52067160 | None:intergenic | 40.0% | |
TGCTAGATGAACTTCTCCTT+TGG | + | chr1.2:52068451-52068470 | None:intergenic | 40.0% | |
TTTATGGAACTGTGCAACGT+TGG | + | chr1.2:52069656-52069675 | None:intergenic | 40.0% | |
TTTCTGTGTTTAGGTCCACA+AGG | - | chr1.2:52067248-52067267 | MS.gene059026:intron | 40.0% | |
TTTGTGCCAGAAAAGTGAGA+GGG | - | chr1.2:52068015-52068034 | MS.gene059026:intron | 40.0% | |
! | AAGTAGTACTTCTGGGTTGA+AGG | - | chr1.2:52067940-52067959 | MS.gene059026:intron | 40.0% |
! | AGACATTTGGGACAGTGTAT+TGG | + | chr1.2:52067310-52067329 | None:intergenic | 40.0% |
! | AGTACCGAGTTTCTTGAACA+AGG | + | chr1.2:52067115-52067134 | None:intergenic | 40.0% |
! | ATCCAAACAAGGTGTTCCTT+GGG | + | chr1.2:52067575-52067594 | None:intergenic | 40.0% |
! | TATCCAAACAAGGTGTTCCT+TGG | + | chr1.2:52067576-52067595 | None:intergenic | 40.0% |
! | TCCTCAATGGCTTTTCCTTA+GGG | + | chr1.2:52068354-52068373 | None:intergenic | 40.0% |
! | TGGTGACTTTGAGAACGATT+GGG | - | chr1.2:52068228-52068247 | MS.gene059026:intron | 40.0% |
! | TGGTTTTTGTTGAAGTAGCG+AGG | + | chr1.2:52066817-52066836 | None:intergenic | 40.0% |
! | TTAACATACTGGTTGGGCTA+CGG | - | chr1.2:52069016-52069035 | MS.gene059026:intron | 40.0% |
! | TTGGTGACTTTGAGAACGAT+TGG | - | chr1.2:52068227-52068246 | MS.gene059026:intron | 40.0% |
!! | GATGCATTGGTGATGATGAT+GGG | + | chr1.2:52066910-52066929 | None:intergenic | 40.0% |
!! | TCCCAATGAGTTTGTTAAGG+AGG | - | chr1.2:52068191-52068210 | MS.gene059026:intron | 40.0% |
!! | TGATGCATTGGTGATGATGA+TGG | + | chr1.2:52066911-52066930 | None:intergenic | 40.0% |
AAATGAAGAGGGATTCACCC+TGG | + | chr1.2:52068557-52068576 | None:intergenic | 45.0% | |
AACCCAAGGAACACCTTGTT+TGG | - | chr1.2:52067570-52067589 | MS.gene059026:intron | 45.0% | |
AAGAAGAAGACATGGCTCGA+GGG | + | chr1.2:52066954-52066973 | None:intergenic | 45.0% | |
AAGACAACGGGGTTCAAAAC+CGG | - | chr1.2:52069046-52069065 | MS.gene059026:intron | 45.0% | |
AATGAAGAGGGATTCACCCT+GGG | + | chr1.2:52068556-52068575 | None:intergenic | 45.0% | |
ACCCTAAGGAAAAGCCATTG+AGG | - | chr1.2:52068350-52068369 | MS.gene059026:intron | 45.0% | |
AGCCCAACCAGTATGTTAAC+CGG | + | chr1.2:52069015-52069034 | None:intergenic | 45.0% | |
ATGGGTGAAGGAGTGGAAAT+GGG | + | chr1.2:52066892-52066911 | None:intergenic | 45.0% | |
CAGACTTCTGTGATTGAGAG+TGG | - | chr1.2:52067867-52067886 | MS.gene059026:intron | 45.0% | |
CTGGCACAAACACAGATTCT+TGG | + | chr1.2:52068005-52068024 | None:intergenic | 45.0% | |
GAAACTCGGTACTCAACCAT+TGG | - | chr1.2:52067122-52067141 | MS.gene059026:intron | 45.0% | |
GGCTCAAAATGTCTCCTCAA+TGG | + | chr1.2:52068367-52068386 | None:intergenic | 45.0% | |
GTTTGTGCCAGAAAAGTGAG+AGG | - | chr1.2:52068014-52068033 | MS.gene059026:intron | 45.0% | |
TCTTCCCATGCCTTGAACTA+TGG | - | chr1.2:52068821-52068840 | MS.gene059026:intron | 45.0% | |
TTCTGCAATTGTGGACCTTG+TGG | + | chr1.2:52067266-52067285 | None:intergenic | 45.0% | |
TTGACGTGACAACCCATCAT+TGG | - | chr1.2:52067439-52067458 | MS.gene059026:intron | 45.0% | |
! | CACCGGTTAACATACTGGTT+GGG | - | chr1.2:52069010-52069029 | MS.gene059026:intron | 45.0% |
! | CTACGGGTTGAAGAAGACAA+CGG | - | chr1.2:52069033-52069052 | MS.gene059026:intron | 45.0% |
! | CTATTTGCACATGGGTTGTG+AGG | - | chr1.2:52068617-52068636 | MS.gene059026:intron | 45.0% |
! | CTCCTCAATGGCTTTTCCTT+AGG | + | chr1.2:52068355-52068374 | None:intergenic | 45.0% |
! | GCATGTTTTCCAGCCATAAG+AGG | + | chr1.2:52069515-52069534 | None:intergenic | 45.0% |
! | GTAATGTTAATTGGTGCCCC+CGG | - | chr1.2:52068856-52068875 | MS.gene059026:intron | 45.0% |
! | TAACATACTGGTTGGGCTAC+GGG | - | chr1.2:52069017-52069036 | MS.gene059026:intron | 45.0% |
! | TAATGTTAATTGGTGCCCCC+GGG | - | chr1.2:52068857-52068876 | MS.gene059026:intron | 45.0% |
! | TACGGGTTGAAGAAGACAAC+GGG | - | chr1.2:52069034-52069053 | MS.gene059026:intron | 45.0% |
!! | TTCTCTCCCTCTCACTTTTC+TGG | + | chr1.2:52068024-52068043 | None:intergenic | 45.0% |
!! | TTGGTGATGATGATGGGTGA+AGG | + | chr1.2:52066904-52066923 | None:intergenic | 45.0% |
!!! | TATATTAGATTTTTTTTTAT+AGG | + | chr1.2:52069119-52069138 | None:intergenic | 5.0% |
AGACAACGGGGTTCAAAACC+GGG | - | chr1.2:52069047-52069066 | MS.gene059026:intron | 50.0% | |
AGGAGACCTAGTAGCAGAAG+GGG | - | chr1.2:52068317-52068336 | MS.gene059026:intron | 50.0% | |
AGTAGCAGAAGGGGTTGTGA+GGG | - | chr1.2:52068326-52068345 | MS.gene059026:intron | 50.0% | |
ATTGCAGGTGGCCAACACAT+TGG | - | chr1.2:52069227-52069246 | MS.gene059026:intron | 50.0% | |
CAAACTCATTGGGAAACCCG+TGG | + | chr1.2:52068185-52068204 | None:intergenic | 50.0% | |
CTGGTGCTCTTATTGCTCTG+AGG | - | chr1.2:52067083-52067102 | MS.gene059026:intron | 50.0% | |
CTGTACAGCCACCAATGTGT+TGG | + | chr1.2:52069241-52069260 | None:intergenic | 50.0% | |
GAAGAAGAAGACATGGCTCG+AGG | + | chr1.2:52066955-52066974 | None:intergenic | 50.0% | |
GAGGAGACCTAGTAGCAGAA+GGG | - | chr1.2:52068316-52068335 | MS.gene059026:intron | 50.0% | |
GATGGGTGAAGGAGTGGAAA+TGG | + | chr1.2:52066893-52066912 | None:intergenic | 50.0% | |
GCGATTGTGAATGGTGAGTG+TGG | + | chr1.2:52068761-52068780 | None:intergenic | 50.0% | |
GGAGAAGAAGAAGAGGGAGA+AGG | + | chr1.2:52066988-52067007 | None:intergenic | 50.0% | |
TAGTAGCAGAAGGGGTTGTG+AGG | - | chr1.2:52068325-52068344 | MS.gene059026:intron | 50.0% | |
TCACAACCCCTTCTGCTACT+AGG | + | chr1.2:52068326-52068345 | None:intergenic | 50.0% | |
TGAGGAGACCTAGTAGCAGA+AGG | - | chr1.2:52068315-52068334 | MS.gene059026:intron | 50.0% | |
TGGGTGAAGGAGTGGAAATG+GGG | + | chr1.2:52066891-52066910 | None:intergenic | 50.0% | |
! | AATGTTAATTGGTGCCCCCG+GGG | - | chr1.2:52068858-52068877 | MS.gene059026:intron | 50.0% |
! | ACGGGTTGAAGAAGACAACG+GGG | - | chr1.2:52069035-52069054 | MS.gene059026:intron | 50.0% |
! | CAACACATTGGTGGCTGTAC+AGG | - | chr1.2:52069239-52069258 | MS.gene059026:intron | 50.0% |
! | GTACTTCTGGGTTGAAGGCA+TGG | - | chr1.2:52067945-52067964 | MS.gene059026:intron | 50.0% |
!! | CTCAGAGCAATAAGAGCACC+AGG | + | chr1.2:52067085-52067104 | None:intergenic | 50.0% |
!! | GATGATGATGGGTGAAGGAG+TGG | + | chr1.2:52066899-52066918 | None:intergenic | 50.0% |
!! | GCACCGGTTAACATACTGGT+TGG | - | chr1.2:52069009-52069028 | MS.gene059026:intron | 50.0% |
AGACATGGCTCGAGGGAAAG+TGG | + | chr1.2:52066947-52066966 | None:intergenic | 55.0% | |
AGTATGTTAACCGGTGCCCC+CGG | + | chr1.2:52069006-52069025 | None:intergenic | 55.0% | |
GACATGGCTCGAGGGAAAGT+GGG | + | chr1.2:52066946-52066965 | None:intergenic | 55.0% | |
GGGTGAAGGAGTGGAAATGG+GGG | + | chr1.2:52066890-52066909 | None:intergenic | 55.0% | |
GGTGGCAATGGCAATGGCAA+TGG | + | chr1.2:52068497-52068516 | None:intergenic | 55.0% | |
TCGAGACGAGAGCCGAAAGA+AGG | + | chr1.2:52067009-52067028 | None:intergenic | 55.0% | |
TTGCTCCTTAACCAGTGCCC+CGG | + | chr1.2:52068878-52068897 | None:intergenic | 55.0% | |
CGGGGTTCAAAACCGGGAGA+AGG | - | chr1.2:52069053-52069072 | MS.gene059026:intron | 60.0% | |
GCAGGTGGCCAACACATTGG+TGG | - | chr1.2:52069230-52069249 | MS.gene059026:intron | 60.0% | |
GGGGTTGTGAGGGAACCCTA+AGG | - | chr1.2:52068336-52068355 | MS.gene059026:intron | 60.0% | |
GGTTTCCTTAACCCGTGCCC+CGG | - | chr1.2:52068984-52069003 | MS.gene059026:intron | 60.0% | |
GTATGTTAACCGGTGCCCCC+GGG | + | chr1.2:52069005-52069024 | None:intergenic | 60.0% | |
GTTTCCTTAACCCGTGCCCC+GGG | - | chr1.2:52068985-52069004 | MS.gene059026:intron | 60.0% | |
TATGTTAACCGGTGCCCCCG+GGG | + | chr1.2:52069004-52069023 | None:intergenic | 60.0% | |
TGCTCCTTAACCAGTGCCCC+GGG | + | chr1.2:52068877-52068896 | None:intergenic | 60.0% | |
TTTCCTTAACCCGTGCCCCG+GGG | - | chr1.2:52068986-52069005 | MS.gene059026:intron | 60.0% | |
! | TGCGCGGCGTGATGATGCAT+TGG | + | chr1.2:52066923-52066942 | None:intergenic | 60.0% |
!! | GGGGGCACCGGTTAACATAC+TGG | - | chr1.2:52069005-52069024 | MS.gene059026:intron | 60.0% |
CTCCTTAACCAGTGCCCCGG+GGG | + | chr1.2:52068875-52068894 | None:intergenic | 65.0% | |
CTCGAGGGAAAGTGGGTGCG+CGG | + | chr1.2:52066939-52066958 | None:intergenic | 65.0% | |
GCTCCTTAACCAGTGCCCCG+GGG | + | chr1.2:52068876-52068895 | None:intergenic | 65.0% | |
TTCCTTAACCCGTGCCCCGG+GGG | - | chr1.2:52068987-52069006 | MS.gene059026:intron | 65.0% | |
! | AATTGGTGCCCCCGGGGCAC+TGG | - | chr1.2:52068864-52068883 | MS.gene059026:intron | 70.0% |
!! | TGCCCCCGGGGCACTGGTTA+AGG | - | chr1.2:52068870-52068889 | MS.gene059026:intron | 70.0% |
TAACCGGTGCCCCCGGGGCA+CGG | + | chr1.2:52068999-52069018 | None:intergenic | 75.0% | |
! | TGCCCCCGGGGCACGGGTTA+AGG | + | chr1.2:52068992-52069011 | None:intergenic | 75.0% |
! | AACCGGTGCCCCCGGGGCAC+GGG | + | chr1.2:52068998-52069017 | None:intergenic | 80.0% |
!! | AACCCGTGCCCCGGGGGCAC+CGG | - | chr1.2:52068993-52069012 | MS.gene059026:intron | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 52066781 | 52069817 | 52066781 | ID=MS.gene059026 |
chr1.2 | mRNA | 52066781 | 52069817 | 52066781 | ID=MS.gene059026.t1;Parent=MS.gene059026 |
chr1.2 | exon | 52069433 | 52069817 | 52069433 | ID=MS.gene059026.t1.exon1;Parent=MS.gene059026.t1 |
chr1.2 | CDS | 52069433 | 52069817 | 52069433 | ID=cds.MS.gene059026.t1;Parent=MS.gene059026.t1 |
chr1.2 | exon | 52069263 | 52069337 | 52069263 | ID=MS.gene059026.t1.exon2;Parent=MS.gene059026.t1 |
chr1.2 | CDS | 52069263 | 52069337 | 52069263 | ID=cds.MS.gene059026.t1;Parent=MS.gene059026.t1 |
chr1.2 | exon | 52067338 | 52067364 | 52067338 | ID=MS.gene059026.t1.exon3;Parent=MS.gene059026.t1 |
chr1.2 | CDS | 52067338 | 52067364 | 52067338 | ID=cds.MS.gene059026.t1;Parent=MS.gene059026.t1 |
chr1.2 | exon | 52066781 | 52066857 | 52066781 | ID=MS.gene059026.t1.exon4;Parent=MS.gene059026.t1 |
chr1.2 | CDS | 52066781 | 52066857 | 52066781 | ID=cds.MS.gene059026.t1;Parent=MS.gene059026.t1 |
Gene Sequence |
Protein sequence |