Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28225.t1 | XP_024635751.1 | 95.4 | 108 | 5 | 0 | 1 | 108 | 1 | 108 | 9.10E-49 | 204.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28225.t1 | Q9FNR1 | 55.6 | 108 | 44 | 2 | 1 | 108 | 1 | 104 | 1.3e-27 | 125.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28225.t1 | G7IZB0 | 95.4 | 108 | 5 | 0 | 1 | 108 | 1 | 108 | 6.5e-49 | 204.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050277 | MS.gene28225 | 0.838281 | 3.16E-57 | -1.69E-46 |
| MS.gene055808 | MS.gene28225 | 0.80825 | 3.40E-50 | -1.69E-46 |
| MS.gene056091 | MS.gene28225 | 0.819547 | 1.10E-52 | -1.69E-46 |
| MS.gene056631 | MS.gene28225 | 0.83133 | 1.77E-55 | -1.69E-46 |
| MS.gene057705 | MS.gene28225 | 0.829487 | 5.01E-55 | -1.69E-46 |
| MS.gene06001 | MS.gene28225 | 0.832119 | 1.13E-55 | -1.69E-46 |
| MS.gene060830 | MS.gene28225 | 0.847618 | 1.03E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28225.t1 | MTR_3g025880 | 73.566 | 401 | 78 | 5 | 1 | 379 | 1 | 395 | 8.17e-156 | 452 |
| MS.gene28225.t1 | MTR_3g025880 | 74.101 | 278 | 29 | 6 | 233 | 477 | 168 | 435 | 6.42e-90 | 283 |
| MS.gene28225.t1 | MTR_3g025880 | 53.670 | 218 | 49 | 8 | 298 | 504 | 175 | 351 | 4.12e-29 | 120 |
| MS.gene28225.t1 | MTR_4g109540 | 70.370 | 108 | 30 | 1 | 1 | 108 | 1 | 106 | 1.02e-48 | 169 |
| MS.gene28225.t1 | MTR_4g109540 | 66.379 | 116 | 29 | 2 | 1 | 108 | 1 | 114 | 3.36e-46 | 163 |
| MS.gene28225.t1 | MTR_7g013730 | 60.000 | 110 | 40 | 2 | 1 | 110 | 1 | 106 | 1.22e-37 | 139 |
| MS.gene28225.t1 | MTR_7g013740 | 59.259 | 108 | 40 | 2 | 1 | 108 | 1 | 104 | 1.90e-31 | 119 |
| MS.gene28225.t1 | MTR_3g014000 | 52.381 | 105 | 36 | 3 | 1 | 105 | 1 | 91 | 5.35e-24 | 98.2 |
| MS.gene28225.t1 | MTR_3g084040 | 45.614 | 114 | 49 | 4 | 1 | 112 | 1 | 103 | 1.64e-23 | 95.5 |
| MS.gene28225.t1 | MTR_3g084040 | 46.296 | 108 | 49 | 3 | 1 | 108 | 1 | 99 | 2.77e-22 | 93.6 |
| MS.gene28225.t1 | MTR_7g099940 | 39.091 | 110 | 58 | 1 | 1 | 110 | 1 | 101 | 6.74e-18 | 80.9 |
| MS.gene28225.t1 | MTR_4g070080 | 51.562 | 64 | 31 | 0 | 45 | 108 | 7 | 70 | 1.02e-16 | 77.0 |
| MS.gene28225.t1 | MTR_7g105260 | 53.425 | 73 | 29 | 1 | 45 | 112 | 33 | 105 | 1.15e-16 | 77.4 |
| MS.gene28225.t1 | MTR_3g080130 | 50.746 | 67 | 33 | 0 | 45 | 111 | 37 | 103 | 2.01e-16 | 76.3 |
| MS.gene28225.t1 | MTR_4g063560 | 36.634 | 101 | 53 | 1 | 10 | 110 | 10 | 99 | 2.17e-16 | 75.5 |
| MS.gene28225.t1 | MTR_4g081520 | 46.377 | 69 | 37 | 0 | 42 | 110 | 49 | 117 | 8.15e-16 | 75.1 |
| MS.gene28225.t1 | MTR_4g070140 | 46.970 | 66 | 35 | 0 | 45 | 110 | 9 | 74 | 1.34e-15 | 75.5 |
| MS.gene28225.t1 | MTR_3g075500 | 42.857 | 77 | 42 | 1 | 33 | 109 | 197 | 271 | 6.51e-14 | 72.4 |
| MS.gene28225.t1 | MTR_3g055990 | 45.333 | 75 | 38 | 1 | 45 | 116 | 7 | 81 | 7.10e-14 | 74.3 |
| MS.gene28225.t1 | MTR_3g055990 | 45.333 | 75 | 38 | 1 | 45 | 116 | 7 | 81 | 7.10e-14 | 74.3 |
| MS.gene28225.t1 | MTR_4g070190 | 50.000 | 64 | 32 | 0 | 45 | 108 | 9 | 72 | 9.82e-14 | 69.7 |
| MS.gene28225.t1 | MTR_3g075500 | 43.421 | 76 | 41 | 1 | 33 | 108 | 197 | 270 | 1.14e-13 | 72.0 |
| MS.gene28225.t1 | MTR_7g117495 | 44.000 | 75 | 39 | 1 | 38 | 112 | 12 | 83 | 1.25e-13 | 71.2 |
| MS.gene28225.t1 | MTR_7g117495 | 44.000 | 75 | 39 | 1 | 38 | 112 | 12 | 83 | 1.61e-13 | 71.2 |
| MS.gene28225.t1 | MTR_5g097580 | 45.333 | 75 | 38 | 1 | 45 | 116 | 7 | 81 | 1.62e-13 | 73.2 |
| MS.gene28225.t1 | MTR_5g097580 | 45.333 | 75 | 38 | 1 | 45 | 116 | 7 | 81 | 2.03e-13 | 72.8 |
| MS.gene28225.t1 | MTR_6g477870 | 40.000 | 75 | 40 | 1 | 44 | 113 | 95 | 169 | 2.56e-13 | 68.9 |
| MS.gene28225.t1 | MTR_6g477870 | 40.909 | 66 | 39 | 0 | 44 | 109 | 95 | 160 | 3.00e-13 | 68.2 |
| MS.gene28225.t1 | MTR_3g029580 | 38.298 | 94 | 54 | 2 | 19 | 110 | 7 | 98 | 6.52e-13 | 66.2 |
| MS.gene28225.t1 | MTR_8g024520 | 41.333 | 75 | 40 | 1 | 38 | 108 | 19 | 93 | 1.08e-12 | 68.9 |
| MS.gene28225.t1 | MTR_8g024520 | 41.333 | 75 | 40 | 1 | 38 | 108 | 19 | 93 | 1.10e-12 | 68.9 |
| MS.gene28225.t1 | MTR_2g096560 | 46.269 | 67 | 36 | 0 | 44 | 110 | 7 | 73 | 1.36e-12 | 63.9 |
| MS.gene28225.t1 | MTR_1g064230 | 46.154 | 65 | 35 | 0 | 43 | 107 | 195 | 259 | 1.74e-12 | 68.6 |
| MS.gene28225.t1 | MTR_4g035310 | 42.188 | 64 | 37 | 0 | 38 | 101 | 10 | 73 | 1.80e-12 | 68.2 |
| MS.gene28225.t1 | MTR_3g029580 | 38.710 | 93 | 53 | 2 | 19 | 109 | 7 | 97 | 1.90e-12 | 65.1 |
| MS.gene28225.t1 | MTR_4g035310 | 42.188 | 64 | 37 | 0 | 38 | 101 | 10 | 73 | 2.10e-12 | 68.2 |
| MS.gene28225.t1 | MTR_3g116130 | 42.254 | 71 | 40 | 1 | 32 | 101 | 16 | 86 | 4.29e-12 | 67.4 |
| MS.gene28225.t1 | MTR_4g081510 | 40.278 | 72 | 43 | 0 | 39 | 110 | 39 | 110 | 4.34e-12 | 65.5 |
| MS.gene28225.t1 | MTR_4g104470 | 51.613 | 62 | 30 | 0 | 47 | 108 | 219 | 280 | 6.86e-12 | 67.0 |
| MS.gene28225.t1 | MTR_1g092860 | 39.394 | 66 | 40 | 0 | 45 | 110 | 193 | 258 | 9.01e-12 | 66.2 |
| MS.gene28225.t1 | MTR_3g116130 | 42.254 | 71 | 40 | 1 | 32 | 101 | 16 | 86 | 1.36e-11 | 66.6 |
| MS.gene28225.t1 | MTR_3g065190 | 31.858 | 113 | 64 | 3 | 17 | 121 | 83 | 190 | 1.48e-11 | 66.6 |
| MS.gene28225.t1 | MTR_4g088010 | 32.174 | 115 | 70 | 3 | 7 | 113 | 35 | 149 | 2.07e-11 | 65.9 |
| MS.gene28225.t1 | MTR_3g092490 | 45.902 | 61 | 30 | 1 | 44 | 104 | 26 | 83 | 3.72e-11 | 62.4 |
| MS.gene28225.t1 | MTR_3g092490 | 45.902 | 61 | 30 | 1 | 44 | 104 | 26 | 83 | 7.17e-11 | 63.2 |
| MS.gene28225.t1 | MTR_3g092490 | 45.902 | 61 | 30 | 1 | 44 | 104 | 26 | 83 | 7.61e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28225.t1 | AT5G61030 | 55.556 | 108 | 44 | 2 | 1 | 108 | 1 | 104 | 1.35e-35 | 135 |
| MS.gene28225.t1 | AT5G61030 | 55.556 | 108 | 44 | 2 | 1 | 108 | 1 | 104 | 1.35e-35 | 135 |
| MS.gene28225.t1 | AT1G74230 | 52.778 | 108 | 40 | 3 | 1 | 108 | 1 | 97 | 1.24e-27 | 112 |
| MS.gene28225.t1 | AT4G13850 | 42.609 | 115 | 43 | 2 | 1 | 108 | 1 | 99 | 6.45e-21 | 89.0 |
| MS.gene28225.t1 | AT4G13850 | 42.609 | 115 | 43 | 2 | 1 | 108 | 1 | 99 | 7.56e-21 | 89.4 |
| MS.gene28225.t1 | AT4G13850 | 42.609 | 115 | 43 | 2 | 1 | 108 | 1 | 99 | 9.58e-21 | 89.4 |
| MS.gene28225.t1 | AT4G13850 | 42.609 | 115 | 43 | 2 | 1 | 108 | 1 | 99 | 1.09e-20 | 89.4 |
| MS.gene28225.t1 | AT5G06210 | 55.385 | 65 | 29 | 0 | 44 | 108 | 34 | 98 | 1.28e-18 | 83.2 |
| MS.gene28225.t1 | AT2G37510 | 48.780 | 82 | 36 | 2 | 36 | 112 | 27 | 107 | 2.76e-17 | 79.3 |
| MS.gene28225.t1 | AT1G18630 | 39.130 | 115 | 54 | 4 | 1 | 110 | 4 | 107 | 6.89e-17 | 78.6 |
| MS.gene28225.t1 | AT2G27330 | 44.086 | 93 | 45 | 3 | 19 | 110 | 1 | 87 | 3.14e-16 | 75.5 |
| MS.gene28225.t1 | AT2G21660 | 46.914 | 81 | 38 | 1 | 39 | 114 | 3 | 83 | 5.54e-16 | 76.6 |
| MS.gene28225.t1 | AT4G24770 | 50.746 | 67 | 33 | 0 | 42 | 108 | 242 | 308 | 3.52e-15 | 77.4 |
| MS.gene28225.t1 | AT4G24770 | 50.746 | 67 | 33 | 0 | 42 | 108 | 242 | 308 | 3.52e-15 | 77.4 |
| MS.gene28225.t1 | AT1G73530 | 42.308 | 78 | 40 | 1 | 42 | 114 | 75 | 152 | 5.16e-15 | 73.9 |
| MS.gene28225.t1 | AT3G54770 | 46.269 | 67 | 36 | 0 | 37 | 103 | 10 | 76 | 7.47e-15 | 75.1 |
| MS.gene28225.t1 | AT3G54770 | 46.269 | 67 | 36 | 0 | 37 | 103 | 10 | 76 | 8.25e-15 | 75.1 |
| MS.gene28225.t1 | AT3G08000 | 52.239 | 67 | 32 | 0 | 45 | 111 | 42 | 108 | 8.41e-15 | 72.0 |
| MS.gene28225.t1 | AT5G59865 | 40.860 | 93 | 53 | 2 | 19 | 110 | 1 | 92 | 1.32e-14 | 70.5 |
| MS.gene28225.t1 | AT3G46020 | 45.588 | 68 | 37 | 0 | 43 | 110 | 6 | 73 | 1.55e-14 | 70.1 |
| MS.gene28225.t1 | AT2G21690 | 48.333 | 60 | 31 | 0 | 47 | 106 | 10 | 69 | 2.50e-14 | 70.1 |
| MS.gene28225.t1 | AT3G26420 | 35.366 | 82 | 48 | 1 | 38 | 114 | 1 | 82 | 2.77e-14 | 73.2 |
| MS.gene28225.t1 | AT2G21660 | 48.571 | 70 | 36 | 0 | 39 | 108 | 3 | 72 | 3.51e-14 | 70.9 |
| MS.gene28225.t1 | AT2G37220 | 49.206 | 63 | 32 | 0 | 45 | 107 | 205 | 267 | 5.33e-14 | 73.2 |
| MS.gene28225.t1 | AT3G07810 | 45.455 | 77 | 39 | 1 | 43 | 116 | 5 | 81 | 6.70e-14 | 74.7 |
| MS.gene28225.t1 | AT3G07810 | 45.455 | 77 | 39 | 1 | 43 | 116 | 5 | 81 | 7.15e-14 | 74.3 |
| MS.gene28225.t1 | AT4G39260 | 42.667 | 75 | 38 | 1 | 45 | 114 | 7 | 81 | 1.03e-13 | 68.6 |
| MS.gene28225.t1 | AT4G39260 | 42.667 | 75 | 38 | 1 | 45 | 114 | 7 | 81 | 2.80e-13 | 68.6 |
| MS.gene28225.t1 | AT5G55550 | 46.970 | 66 | 33 | 1 | 45 | 110 | 7 | 70 | 3.10e-13 | 72.4 |
| MS.gene28225.t1 | AT5G55550 | 46.970 | 66 | 33 | 1 | 45 | 110 | 7 | 70 | 3.10e-13 | 72.4 |
| MS.gene28225.t1 | AT5G55550 | 46.970 | 66 | 33 | 1 | 45 | 110 | 7 | 70 | 3.10e-13 | 72.4 |
| MS.gene28225.t1 | AT5G55550 | 46.970 | 66 | 33 | 1 | 45 | 110 | 7 | 70 | 3.10e-13 | 72.4 |
| MS.gene28225.t1 | AT5G55550 | 46.970 | 66 | 33 | 1 | 45 | 110 | 7 | 70 | 3.10e-13 | 72.4 |
| MS.gene28225.t1 | AT5G50250 | 50.000 | 64 | 32 | 0 | 45 | 108 | 208 | 271 | 3.21e-13 | 70.9 |
| MS.gene28225.t1 | AT5G50250 | 49.153 | 59 | 30 | 0 | 45 | 103 | 114 | 172 | 9.17e-11 | 63.5 |
| MS.gene28225.t1 | AT5G54580 | 44.928 | 69 | 38 | 0 | 42 | 110 | 54 | 122 | 3.34e-13 | 67.8 |
| MS.gene28225.t1 | AT5G47620 | 46.377 | 69 | 34 | 1 | 45 | 110 | 7 | 75 | 3.35e-13 | 72.0 |
| MS.gene28225.t1 | AT5G47620 | 46.377 | 69 | 34 | 1 | 45 | 110 | 7 | 75 | 3.35e-13 | 72.0 |
| MS.gene28225.t1 | AT5G47620 | 46.377 | 69 | 34 | 1 | 45 | 110 | 7 | 75 | 3.35e-13 | 72.0 |
| MS.gene28225.t1 | AT5G55550 | 46.970 | 66 | 33 | 1 | 45 | 110 | 7 | 70 | 3.40e-13 | 72.0 |
| MS.gene28225.t1 | AT5G55550 | 46.970 | 66 | 33 | 1 | 45 | 110 | 7 | 70 | 3.40e-13 | 72.0 |
| MS.gene28225.t1 | AT5G55550 | 46.970 | 66 | 33 | 1 | 45 | 110 | 7 | 70 | 3.40e-13 | 72.0 |
| MS.gene28225.t1 | AT5G55550 | 46.970 | 66 | 33 | 1 | 45 | 110 | 7 | 70 | 3.40e-13 | 72.0 |
| MS.gene28225.t1 | AT5G47620 | 40.476 | 84 | 47 | 1 | 45 | 125 | 7 | 90 | 3.86e-13 | 72.0 |
| MS.gene28225.t1 | AT1G76460 | 46.875 | 64 | 34 | 0 | 38 | 101 | 18 | 81 | 4.53e-13 | 70.1 |
| MS.gene28225.t1 | AT5G55550 | 46.970 | 66 | 33 | 1 | 45 | 110 | 7 | 70 | 4.81e-13 | 72.0 |
| MS.gene28225.t1 | AT4G39260 | 43.548 | 62 | 35 | 0 | 45 | 106 | 7 | 68 | 5.19e-13 | 65.9 |
| MS.gene28225.t1 | AT5G55550 | 46.970 | 66 | 33 | 1 | 45 | 110 | 7 | 70 | 5.22e-13 | 71.6 |
| MS.gene28225.t1 | AT1G22910 | 41.176 | 68 | 38 | 1 | 44 | 111 | 13 | 78 | 6.98e-13 | 68.9 |
| MS.gene28225.t1 | AT5G04280 | 40.000 | 65 | 39 | 0 | 44 | 108 | 7 | 71 | 7.98e-13 | 69.7 |
| MS.gene28225.t1 | AT1G22910 | 44.828 | 58 | 32 | 0 | 44 | 101 | 13 | 70 | 8.41e-13 | 68.9 |
| MS.gene28225.t1 | AT4G26650 | 44.928 | 69 | 35 | 1 | 45 | 110 | 13 | 81 | 8.55e-13 | 70.9 |
| MS.gene28225.t1 | AT4G26650 | 44.928 | 69 | 35 | 1 | 45 | 110 | 16 | 84 | 8.56e-13 | 70.9 |
| MS.gene28225.t1 | AT1G20880 | 46.875 | 64 | 34 | 0 | 38 | 101 | 18 | 81 | 1.09e-12 | 68.9 |
| MS.gene28225.t1 | AT1G20880 | 46.875 | 64 | 34 | 0 | 38 | 101 | 18 | 81 | 1.09e-12 | 68.9 |
| MS.gene28225.t1 | AT1G20880 | 46.875 | 64 | 34 | 0 | 38 | 101 | 18 | 81 | 1.09e-12 | 68.9 |
| MS.gene28225.t1 | AT5G47320 | 50.769 | 65 | 32 | 0 | 44 | 108 | 31 | 95 | 1.12e-12 | 67.8 |
| MS.gene28225.t1 | AT3G53460 | 44.000 | 75 | 37 | 1 | 45 | 114 | 258 | 332 | 1.60e-12 | 69.3 |
| MS.gene28225.t1 | AT3G53460 | 44.000 | 75 | 37 | 1 | 45 | 114 | 258 | 332 | 1.60e-12 | 69.3 |
| MS.gene28225.t1 | AT3G53460 | 44.000 | 75 | 37 | 1 | 45 | 114 | 258 | 332 | 1.60e-12 | 69.3 |
| MS.gene28225.t1 | AT3G53460 | 44.000 | 75 | 37 | 1 | 45 | 114 | 279 | 353 | 2.23e-12 | 68.9 |
| MS.gene28225.t1 | AT1G22910 | 44.262 | 61 | 34 | 0 | 41 | 101 | 10 | 70 | 3.96e-12 | 68.2 |
| MS.gene28225.t1 | AT2G46780 | 39.706 | 68 | 41 | 0 | 39 | 106 | 17 | 84 | 4.01e-12 | 68.2 |
| MS.gene28225.t1 | AT2G46780 | 39.706 | 68 | 41 | 0 | 39 | 106 | 17 | 84 | 4.01e-12 | 68.2 |
| MS.gene28225.t1 | AT2G37510 | 37.383 | 107 | 36 | 3 | 36 | 112 | 27 | 132 | 4.88e-12 | 64.7 |
| MS.gene28225.t1 | AT4G13860 | 47.692 | 65 | 34 | 0 | 44 | 108 | 3 | 67 | 5.00e-12 | 62.4 |
| MS.gene28225.t1 | AT1G60650 | 38.235 | 68 | 42 | 0 | 43 | 110 | 11 | 78 | 6.52e-12 | 67.0 |
| MS.gene28225.t1 | AT1G60650 | 38.235 | 68 | 42 | 0 | 43 | 110 | 11 | 78 | 6.52e-12 | 67.0 |
| MS.gene28225.t1 | AT1G33470 | 40.580 | 69 | 37 | 1 | 44 | 108 | 7 | 75 | 1.62e-11 | 65.1 |
| MS.gene28225.t1 | AT1G33470 | 40.580 | 69 | 37 | 1 | 44 | 108 | 7 | 75 | 1.76e-11 | 64.7 |
| MS.gene28225.t1 | AT1G33470 | 40.580 | 69 | 37 | 1 | 44 | 108 | 7 | 75 | 1.88e-11 | 64.7 |
| MS.gene28225.t1 | AT1G22330 | 41.538 | 65 | 38 | 0 | 38 | 102 | 11 | 75 | 2.30e-11 | 65.1 |
| MS.gene28225.t1 | AT4G39260 | 43.750 | 64 | 36 | 0 | 45 | 108 | 7 | 70 | 4.12e-11 | 60.1 |
| MS.gene28225.t1 | AT1G78260 | 41.538 | 65 | 38 | 0 | 38 | 102 | 11 | 75 | 6.18e-11 | 63.9 |
| MS.gene28225.t1 | AT1G78260 | 41.538 | 65 | 38 | 0 | 38 | 102 | 11 | 75 | 7.88e-11 | 63.2 |
| MS.gene28225.t1 | AT3G20930 | 39.394 | 66 | 40 | 0 | 45 | 110 | 283 | 348 | 8.21e-11 | 64.3 |
| MS.gene28225.t1 | AT5G53680 | 39.683 | 63 | 38 | 0 | 41 | 103 | 10 | 72 | 8.67e-11 | 61.2 |
Find 177 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTTCTCCACCACTGTAAT+TGG | 0.187885 | 3.3:+17730866 | None:intergenic |
| GTAGAGTTGGGAGTTTATTA+AGG | 0.262081 | 3.3:-17733990 | MS.gene28225:CDS |
| GCTCCTGGTGTTGGTGGTTA+TGG | 0.275269 | 3.3:-17730822 | MS.gene28225:CDS |
| CTATACCCTGTTGCACTTCC+AGG | 0.289310 | 3.3:+17730708 | None:intergenic |
| CCTCCTGGTGTTGGTGGTTA+TGG | 0.295984 | 3.3:-17731332 | MS.gene28225:CDS |
| CCTCCTGGTGTTGGTGGTTA+TGG | 0.295984 | 3.3:-17731506 | MS.gene28225:CDS |
| GGTTATGGCGGAGGTGGTTA+TGG | 0.310693 | 3.3:-17731635 | MS.gene28225:CDS |
| GCTCCTGGTGTTGGTGGTTA+TGG | 0.311859 | 3.3:-17731089 | MS.gene28225:CDS |
| GCACCTGGTGTTGGTGGTTA+TGG | 0.314342 | 3.3:-17730903 | MS.gene28225:CDS |
| CACTTCCAGGGTATTGATTA+CGG | 0.314514 | 3.3:+17730721 | None:intergenic |
| TATGGTGCTGCTGCTGGATT+TGG | 0.314919 | 3.3:-17730804 | MS.gene28225:CDS |
| GCTCCTGGTGTTGGTGGTTA+TGG | 0.324245 | 3.3:-17731245 | MS.gene28225:CDS |
| GCTCCTGGTGTTGGTGGTTA+TGG | 0.326706 | 3.3:-17731158 | MS.gene28225:CDS |
| GCTCCTGTTGCTGGTGTTTA+CGG | 0.332135 | 3.3:-17730996 | MS.gene28225:CDS |
| GCTCCTAGTGTTGGTGGTTA+TGG | 0.335313 | 3.3:-17731419 | MS.gene28225:CDS |
| CCAAGCCATACGGTGCTTCT+CGG | 0.335689 | 3.3:-17733908 | MS.gene28225:CDS |
| GGTGCTAACAATGTAAATTA+TGG | 0.345822 | 3.3:-17730972 | MS.gene28225:CDS |
| GTTACAGTAATGGCTTTCTT+TGG | 0.352828 | 3.3:-17734012 | None:intergenic |
| GCTCCCGGGAGCAGCTTTGC+TGG | 0.358288 | 3.3:-17730672 | MS.gene28225:CDS |
| GGAGGCATCAAGTGCCATTC+AGG | 0.360417 | 3.3:-17733146 | MS.gene28225:CDS |
| CAACACCACCGGTACTATAA+TGG | 0.362745 | 3.3:+17730769 | None:intergenic |
| CAATACCCTGGAAGTGCAAC+AGG | 0.364374 | 3.3:-17730714 | MS.gene28225:CDS |
| GTAAAAGCTCGACAATTATA+AGG | 0.365127 | 3.3:+17732503 | None:intergenic |
| ACTGGTAGGTCCAAAGGATT+TGG | 0.367522 | 3.3:-17733193 | MS.gene28225:CDS |
| TACGGTAGTGCTCCTGTTGC+TGG | 0.368507 | 3.3:-17731005 | MS.gene28225:CDS |
| GGTGGTTATGGTGCTGCTGC+TGG | 0.370957 | 3.3:-17730810 | MS.gene28225:CDS |
| GGTGGATATTCAGGTGGTTA+TGG | 0.372561 | 3.3:-17731719 | MS.gene28225:intron |
| TCCTACAAACAGCTTGGTAT+TGG | 0.375210 | 3.3:+17733879 | None:intergenic |
| TATGGAAACAATGCAAATTA+TGG | 0.382926 | 3.3:-17731227 | MS.gene28225:CDS |
| TATGGAAACAATGCAAATTA+TGG | 0.382926 | 3.3:-17731314 | MS.gene28225:CDS |
| TATGGAAACAATGCAAATTA+TGG | 0.382926 | 3.3:-17731488 | MS.gene28225:CDS |
| TGGCTTTCTTTGGTAGAGTT+GGG | 0.383300 | 3.3:-17734002 | MS.gene28225:CDS |
| GAAAGCAATTCTGTTAACTA+TGG | 0.395798 | 3.3:-17730849 | MS.gene28225:CDS |
| GAAAGCAATTCTGTTAACTA+TGG | 0.398237 | 3.3:-17730930 | MS.gene28225:CDS |
| TATGGTAACAATGTGAATTA+TGG | 0.398804 | 3.3:-17731140 | MS.gene28225:CDS |
| ATAATTATGGATCGCGAAAC+TGG | 0.398913 | 3.3:-17733211 | MS.gene28225:CDS |
| TATGGAAACGATGCAAATTA+TGG | 0.401781 | 3.3:-17731401 | MS.gene28225:CDS |
| CCTACAAACAGCTTGGTATT+GGG | 0.403404 | 3.3:+17733880 | None:intergenic |
| ATCAAGTGCCATTCAGGCCT+TGG | 0.407278 | 3.3:-17733140 | MS.gene28225:CDS |
| ACTTCCAGGGTATTGATTAC+GGG | 0.413785 | 3.3:+17730722 | None:intergenic |
| GGTGGAAACGATGCAAATTA+TGG | 0.422269 | 3.3:-17731575 | MS.gene28225:CDS |
| TATGATAGAACTGGAGGACT+TGG | 0.426268 | 3.3:-17730645 | MS.gene28225:CDS |
| GCAAATTATGGTGCTGTTGT+AGG | 0.427932 | 3.3:-17731389 | MS.gene28225:CDS |
| ATGGCTTTCTTTGGTAGAGT+TGG | 0.429889 | 3.3:-17734003 | MS.gene28225:CDS |
| AGTAACAAAGCCAAATCCTT+TGG | 0.430233 | 3.3:+17733183 | None:intergenic |
| GGAACTACCAGTGGTGGTTA+TGG | 0.436521 | 3.3:-17731596 | MS.gene28225:CDS |
| ATAGTACCGGTGGTGTTGGT+GGG | 0.437403 | 3.3:-17730764 | MS.gene28225:CDS |
| GGTGGTAACAGTGCAAATTA+TGG | 0.437840 | 3.3:-17731065 | MS.gene28225:CDS |
| CCCAATACCAAGCTGTTTGT+AGG | 0.444353 | 3.3:-17733880 | MS.gene28225:CDS |
| CCACCGTAAACACCAGCAAC+AGG | 0.447301 | 3.3:+17730993 | None:intergenic |
| TATAGTACCGGTGGTGTTGG+TGG | 0.447497 | 3.3:-17730765 | MS.gene28225:CDS |
| GTTAACTATGGTATTGCTCC+TGG | 0.448065 | 3.3:-17730837 | MS.gene28225:CDS |
| GGTAATGCTGCGGGCTATAG+TGG | 0.448750 | 3.3:-17731671 | MS.gene28225:CDS |
| TCTTCATACGGTGGTGGGTA+TGG | 0.456251 | 3.3:-17731692 | MS.gene28225:CDS |
| GGTAATGCTGCTGGAGGTTA+TGG | 0.457740 | 3.3:-17731650 | MS.gene28225:CDS |
| CAAGCCATACGGTGCTTCTC+GGG | 0.458672 | 3.3:-17733907 | MS.gene28225:CDS |
| GGCAGTGCTCCTGGTGTTGG+TGG | 0.458730 | 3.3:-17731095 | MS.gene28225:CDS |
| GCTAACTATGGCAGTGCTCC+TGG | 0.459620 | 3.3:-17731104 | MS.gene28225:CDS |
| CTGGCCATCCAAGGCCTGAA+TGG | 0.463787 | 3.3:+17733132 | None:intergenic |
| GCTGCTGATACTGCTAACTA+TGG | 0.470068 | 3.3:-17731116 | MS.gene28225:CDS |
| TATGGAAACACTTACAATGA+TGG | 0.470763 | 3.3:-17731617 | MS.gene28225:CDS |
| GAAAGCAATGCTGTTAACTA+TGG | 0.472224 | 3.3:-17731185 | MS.gene28225:CDS |
| GAAAGCAATGCTGTTAACTA+TGG | 0.472224 | 3.3:-17731272 | MS.gene28225:CDS |
| GAAAGCAATGCTGTTAACTA+TGG | 0.472224 | 3.3:-17731533 | MS.gene28225:CDS |
| CCACCATAACCACCAACACC+AGG | 0.472812 | 3.3:+17731086 | None:intergenic |
| GGTATTGCTCCTGGTGTTGG+TGG | 0.473295 | 3.3:-17730828 | MS.gene28225:CDS |
| ACAACTCACCGTCAAGAACT+TGG | 0.473731 | 3.3:+17733360 | None:intergenic |
| GTTAACTATGGTAGTGCTCC+TGG | 0.474066 | 3.3:-17731173 | MS.gene28225:CDS |
| GTTAACTATGGTAGTGCTCC+TGG | 0.474066 | 3.3:-17731260 | MS.gene28225:CDS |
| TCCACCAGCAAAGCTGCTCC+CGG | 0.475573 | 3.3:+17730668 | None:intergenic |
| GAAAGCAATGCTGGTAACTA+TGG | 0.477724 | 3.3:-17731359 | MS.gene28225:CDS |
| GAAAGCATTGCTGTTAACTA+TGG | 0.481283 | 3.3:-17731446 | MS.gene28225:CDS |
| ATTACGGGAGAAACCATTGC+TGG | 0.481459 | 3.3:+17730737 | None:intergenic |
| GGCTATAGTGGTAATGCTGC+TGG | 0.483124 | 3.3:-17731659 | MS.gene28225:CDS |
| GCTGGTGGATATGATAGAAC+TGG | 0.486983 | 3.3:-17730654 | MS.gene28225:CDS |
| GGTGTTGGTGGTTATGGTGG+TGG | 0.487083 | 3.3:-17730897 | MS.gene28225:CDS |
| GGTGTTGGTGGTTATGGTGG+TGG | 0.487083 | 3.3:-17731083 | MS.gene28225:CDS |
| GGTAGTGCTCCTGGTGTTGG+TGG | 0.492463 | 3.3:-17731164 | MS.gene28225:CDS |
| GGTAGTGCTCCTGGTGTTGG+TGG | 0.492463 | 3.3:-17731251 | MS.gene28225:CDS |
| GGTAGTCCTCCTGGTGTTGG+TGG | 0.492463 | 3.3:-17731338 | MS.gene28225:CDS |
| GGTAGTCCTCCTGGTGTTGG+TGG | 0.492463 | 3.3:-17731512 | MS.gene28225:CDS |
| CCGAGAAGCACCGTATGGCT+TGG | 0.494835 | 3.3:+17733908 | None:intergenic |
| GTTAACTATGGTAGTCCTCC+TGG | 0.498449 | 3.3:-17731521 | MS.gene28225:CDS |
| GCAAATTATGGTGCGGCTGT+AGG | 0.498773 | 3.3:-17731302 | MS.gene28225:CDS |
| GCAAATTATGGTGCAGCTGT+AGG | 0.500685 | 3.3:-17731215 | MS.gene28225:CDS |
| GCACCATAACCACCAACACC+AGG | 0.502988 | 3.3:+17730819 | None:intergenic |
| AGCAGTGGCAGTTCAGCTCC+CGG | 0.508874 | 3.3:-17730687 | MS.gene28225:CDS |
| CATTCAGGCCTTGGATGGCC+AGG | 0.510255 | 3.3:-17733131 | MS.gene28225:intron |
| TATGGTATTGCTCCTGGTGT+TGG | 0.511609 | 3.3:-17730831 | MS.gene28225:CDS |
| GGTAACTATGGTAGTCCTCC+TGG | 0.512302 | 3.3:-17731347 | MS.gene28225:CDS |
| GGTAGTGCACCTGGTGTTGG+TGG | 0.514951 | 3.3:-17730909 | MS.gene28225:CDS |
| CCCGGGAGCAGCTTTGCTGG+TGG | 0.515216 | 3.3:-17730669 | MS.gene28225:CDS |
| CGTATGGCTTGGAAAACAGA+TGG | 0.517156 | 3.3:+17733919 | None:intergenic |
| TATGGCAGTGCTCCTGGTGT+TGG | 0.518016 | 3.3:-17731098 | MS.gene28225:CDS |
| CCTGGTGTTGGTGGTTATGG+TGG | 0.520748 | 3.3:-17730900 | MS.gene28225:CDS |
| TATGGTAGTGCTCCTGGTGT+TGG | 0.523204 | 3.3:-17731167 | MS.gene28225:CDS |
| TATGGTAGTGCTCCTGGTGT+TGG | 0.523204 | 3.3:-17731254 | MS.gene28225:CDS |
| GGTAGTGCTCCTAGTGTTGG+TGG | 0.524446 | 3.3:-17731425 | MS.gene28225:CDS |
| GCTGGAGGTTATGGCGGAGG+TGG | 0.526799 | 3.3:-17731641 | MS.gene28225:CDS |
| CCTGGTGTTGGTGGTTATGG+TGG | 0.529383 | 3.3:-17731086 | MS.gene28225:CDS |
| CATTATAGTACCGGTGGTGT+TGG | 0.529829 | 3.3:-17730768 | MS.gene28225:CDS |
| TAGTACCGGTGGTGTTGGTG+GGG | 0.534630 | 3.3:-17730763 | MS.gene28225:CDS |
| AGTACCGGTGGTGTTGGTGG+GGG | 0.540589 | 3.3:-17730762 | MS.gene28225:CDS |
| TATACCCTGTTGCACTTCCA+GGG | 0.541487 | 3.3:+17730709 | None:intergenic |
| GCAAATTATGGTGCTGCTGT+AGG | 0.541604 | 3.3:-17731563 | MS.gene28225:CDS |
| TATGGTAGTCCTCCTGGTGT+TGG | 0.542111 | 3.3:-17731341 | MS.gene28225:CDS |
| TATGGTAGTCCTCCTGGTGT+TGG | 0.542111 | 3.3:-17731515 | MS.gene28225:CDS |
| GGTAACTCTTCATACGGTGG+TGG | 0.542271 | 3.3:-17731698 | MS.gene28225:CDS |
| GTTAACTATGGTAGTGCACC+TGG | 0.543191 | 3.3:-17730918 | MS.gene28225:CDS |
| CGCGAAACTGGTAGGTCCAA+AGG | 0.548206 | 3.3:-17733199 | MS.gene28225:CDS |
| CCACCAGCAAAGCTGCTCCC+GGG | 0.552776 | 3.3:+17730669 | None:intergenic |
| CTCACCTCCTACAAACAGCT+TGG | 0.553614 | 3.3:+17733873 | None:intergenic |
| GCAAATTATGGTGCGGCTGT+AGG | 0.554874 | 3.3:-17731053 | MS.gene28225:CDS |
| GCAAATTATGGTGCTGCTGT+AGG | 0.557750 | 3.3:-17731476 | MS.gene28225:CDS |
| CTGAGTTACCTGGCCATCCA+AGG | 0.559179 | 3.3:+17733123 | None:intergenic |
| TATGGTAGTGCACCTGGTGT+TGG | 0.559778 | 3.3:-17730912 | MS.gene28225:CDS |
| TACTTACAATACTGTTGAGG+AGG | 0.563819 | 3.3:-17733164 | MS.gene28225:CDS |
| TATGGTGCGGCTGTAGGTGG+TGG | 0.566297 | 3.3:-17731047 | MS.gene28225:CDS |
| GCTGCTGGAGGTTATGGCGG+AGG | 0.566970 | 3.3:-17731644 | MS.gene28225:CDS |
| GGACTTGGATACGGTGAAAG+TGG | 0.567518 | 3.3:-17730630 | MS.gene28225:CDS |
| AGTGATAACCATTATAGTAC+CGG | 0.567539 | 3.3:-17730777 | MS.gene28225:CDS |
| TGGTGGGTATGGTAATGCTG+CGG | 0.568229 | 3.3:-17731681 | MS.gene28225:CDS |
| TTCTCCCGTAATCAATACCC+TGG | 0.569136 | 3.3:-17730726 | MS.gene28225:CDS |
| GGTGGGTATGGTAATGCTGC+GGG | 0.570453 | 3.3:-17731680 | MS.gene28225:CDS |
| GGCGGTGGTGAAAGCAATGC+TGG | 0.572640 | 3.3:-17731368 | MS.gene28225:CDS |
| CCACCATAACCACCAACACC+AGG | 0.573676 | 3.3:+17730900 | None:intergenic |
| AGTGCCATTCAGGCCTTGGA+TGG | 0.574691 | 3.3:-17733136 | MS.gene28225:CDS |
| TATGGTAGTGCTCCTAGTGT+TGG | 0.577700 | 3.3:-17731428 | MS.gene28225:CDS |
| AGATATGGCCAAGTTCTTGA+CGG | 0.577723 | 3.3:-17733368 | MS.gene28225:intron |
| TTTCCATAACCACCAACACC+AGG | 0.577846 | 3.3:+17731242 | None:intergenic |
| TTTCCATAACCACCAACACC+AGG | 0.577846 | 3.3:+17731329 | None:intergenic |
| TTTCCATAACCACCAACACC+AGG | 0.577846 | 3.3:+17731503 | None:intergenic |
| TGTTACTTACAATACTGTTG+AGG | 0.579889 | 3.3:-17733167 | MS.gene28225:CDS |
| GTAAATTATGGTACTGCTGT+AGG | 0.581294 | 3.3:-17730960 | MS.gene28225:CDS |
| GCAGTGGCAGTTCAGCTCCC+GGG | 0.581433 | 3.3:-17730686 | MS.gene28225:CDS |
| GAAAGCAATTCTGTTAACTA+CGG | 0.582061 | 3.3:-17731023 | MS.gene28225:CDS |
| GTATGGCTTGGAAAACAGAT+GGG | 0.584601 | 3.3:+17733920 | None:intergenic |
| TTTCCATAACCACCAACACT+AGG | 0.587024 | 3.3:+17731416 | None:intergenic |
| TATGGTGCGGCTGTAGGCGG+TGG | 0.590083 | 3.3:-17731296 | MS.gene28225:CDS |
| TATGGTGCTGCTGTAGGCGG+TGG | 0.593381 | 3.3:-17731470 | MS.gene28225:CDS |
| TATGGTGCTGCTGTAGGCGG+TGG | 0.593381 | 3.3:-17731557 | MS.gene28225:CDS |
| GGTTATGGTAACTCTTCATA+CGG | 0.593911 | 3.3:-17731704 | MS.gene28225:CDS |
| TATGGTGCTGTTGTAGGCGG+TGG | 0.595550 | 3.3:-17731383 | MS.gene28225:CDS |
| AATTATGGTGCGGCTGTAGG+TGG | 0.596398 | 3.3:-17731050 | MS.gene28225:CDS |
| AGAACTGGAGGACTTGGATA+CGG | 0.599018 | 3.3:-17730639 | MS.gene28225:CDS |
| AACAGTGCCAATTACAGTGG+TGG | 0.607861 | 3.3:-17730873 | MS.gene28225:CDS |
| AATACCAAGCTGTTTGTAGG+AGG | 0.614431 | 3.3:-17733877 | MS.gene28225:intron |
| TTACGGGAGAAACCATTGCT+GGG | 0.614736 | 3.3:+17730738 | None:intergenic |
| TTACCATAACCACCAACACC+AGG | 0.615865 | 3.3:+17731155 | None:intergenic |
| GTTTCCACCATAACCACCAC+TGG | 0.622310 | 3.3:+17731589 | None:intergenic |
| AATTATGGTGCGGCTGTAGG+CGG | 0.623218 | 3.3:-17731299 | MS.gene28225:CDS |
| TTATGGATCGCGAAACTGGT+AGG | 0.623605 | 3.3:-17733207 | MS.gene28225:CDS |
| ACTACCAGTGGTGGTTATGG+TGG | 0.626441 | 3.3:-17731593 | MS.gene28225:CDS |
| GCTCGACAATTATAAGGACA+AGG | 0.626741 | 3.3:+17732509 | None:intergenic |
| AGTACCCGAGAAGCACCGTA+TGG | 0.630479 | 3.3:+17733903 | None:intergenic |
| TACAATGATGGAACTACCAG+TGG | 0.633369 | 3.3:-17731605 | MS.gene28225:CDS |
| AATGCTGCTGGAGGTTATGG+CGG | 0.635356 | 3.3:-17731647 | MS.gene28225:CDS |
| GTAACTCTTCATACGGTGGT+GGG | 0.644863 | 3.3:-17731697 | MS.gene28225:CDS |
| AATTATGGTGCTGCTGTAGG+CGG | 0.652021 | 3.3:-17731473 | MS.gene28225:CDS |
| AATTATGGTGCTGCTGTAGG+CGG | 0.652021 | 3.3:-17731560 | MS.gene28225:CDS |
| AATGATGGAACTACCAGTGG+TGG | 0.655253 | 3.3:-17731602 | MS.gene28225:CDS |
| CTCGACAATTATAAGGACAA+GGG | 0.657686 | 3.3:+17732510 | None:intergenic |
| CCTGTTGCTGGTGTTTACGG+TGG | 0.660993 | 3.3:-17730993 | MS.gene28225:CDS |
| GATAACCATTATAGTACCGG+TGG | 0.664559 | 3.3:-17730774 | MS.gene28225:CDS |
| TATGGTGCAGCTGTAGGCAG+TGG | 0.665099 | 3.3:-17731209 | MS.gene28225:CDS |
| AGTGCAACAGGGTATAGCAG+TGG | 0.673542 | 3.3:-17730702 | MS.gene28225:CDS |
| AATTATGGTGCTGTTGTAGG+CGG | 0.681282 | 3.3:-17731386 | MS.gene28225:CDS |
| GGTGGATATGATAGAACTGG+AGG | 0.686015 | 3.3:-17730651 | MS.gene28225:CDS |
| TATGGTAACTCTTCATACGG+TGG | 0.686177 | 3.3:-17731701 | MS.gene28225:CDS |
| TATGGCTTGGAAAACAGATG+GGG | 0.700345 | 3.3:+17733921 | None:intergenic |
| TATAGTGGTAATGCTGCTGG+AGG | 0.708001 | 3.3:-17731656 | MS.gene28225:CDS |
| CCATAACCACCAACACCAGG+AGG | 0.710651 | 3.3:+17731332 | None:intergenic |
| CCATAACCACCAACACCAGG+AGG | 0.710651 | 3.3:+17731506 | None:intergenic |
| AATACCCTGGAAGTGCAACA+GGG | 0.711945 | 3.3:-17730713 | MS.gene28225:CDS |
| AAACAATGCAAATTATGGTG+CGG | 0.743182 | 3.3:-17731309 | MS.gene28225:CDS |
| GGTAACAGTGCCAATTACAG+TGG | 0.753278 | 3.3:-17730876 | MS.gene28225:CDS |
| TAACAGTGCAAATTATGGTG+CGG | 0.758913 | 3.3:-17731060 | MS.gene28225:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTCATATATATTGAAA+AGG | - | chr3.3:17730767-17730786 | MS.gene28225:CDS | 10.0% |
| !!! | TAAATATAGAAATTTAGTTT+TGG | - | chr3.3:17732577-17732596 | MS.gene28225:intron | 10.0% |
| !!! | TTGTCTAATTATTATTTTTT+TGG | - | chr3.3:17732174-17732193 | MS.gene28225:intron | 10.0% |
| !! | ATACTTCATGTTAATTTAAT+TGG | - | chr3.3:17732484-17732503 | MS.gene28225:CDS | 15.0% |
| !! | CATTCATAAATAAATAAGAA+AGG | + | chr3.3:17732733-17732752 | None:intergenic | 15.0% |
| !! | TTAAACAATAAATATTGCAT+TGG | + | chr3.3:17732646-17732665 | None:intergenic | 15.0% |
| !!! | AATTATTATTTTTTTGGTAG+TGG | - | chr3.3:17732180-17732199 | MS.gene28225:intron | 15.0% |
| !!! | CAATTATGGATTAATTATAT+AGG | + | chr3.3:17732283-17732302 | None:intergenic | 15.0% |
| !! | AAATTATTTATCAGTGTCTA+CGG | + | chr3.3:17730875-17730894 | None:intergenic | 20.0% |
| !! | ATAAGAAAGGTAAAAGTAAT+AGG | + | chr3.3:17732720-17732739 | None:intergenic | 20.0% |
| !! | GATATTCTCTTTATCAATTA+TGG | + | chr3.3:17732297-17732316 | None:intergenic | 20.0% |
| !! | TAAGAAAGGTAAAAGTAATA+GGG | + | chr3.3:17732719-17732738 | None:intergenic | 20.0% |
| !!! | GATAAGTTTTTAAGCTTTTA+AGG | + | chr3.3:17732620-17732639 | None:intergenic | 20.0% |
| !!! | TGAATGTAATTTTTGTTTTC+AGG | - | chr3.3:17732747-17732766 | MS.gene28225:intron | 20.0% |
| !!! | TTTTATAGCAAGGATAATTA+TGG | - | chr3.3:17731351-17731370 | MS.gene28225:CDS | 20.0% |
| ! | AAAAAAGTTTGTAAGATGAC+AGG | + | chr3.3:17732461-17732480 | None:intergenic | 25.0% |
| ! | AAAGTTGACAAAAAAAGAAG+TGG | + | chr3.3:17731728-17731747 | None:intergenic | 25.0% |
| ! | AAATAATAATCTGAGTTACC+TGG | + | chr3.3:17731465-17731484 | None:intergenic | 25.0% |
| ! | AATGTTCATTGGAATCAATT+GGG | + | chr3.3:17731684-17731703 | None:intergenic | 25.0% |
| ! | AATTATTTATCAGTGTCTAC+GGG | + | chr3.3:17730874-17730893 | None:intergenic | 25.0% |
| ! | ACAATGCATAATATATGCAA+AGG | + | chr3.3:17732225-17732244 | None:intergenic | 25.0% |
| ! | ATAAGATTCGATTCACAATT+TGG | - | chr3.3:17731859-17731878 | MS.gene28225:intron | 25.0% |
| ! | ATTAATTATATAGGCAGTAC+TGG | + | chr3.3:17732274-17732293 | None:intergenic | 25.0% |
| ! | TAGTTTATATCATCACATGA+AGG | + | chr3.3:17732416-17732435 | None:intergenic | 25.0% |
| ! | TATGGAAACAATGCAAATTA+TGG | - | chr3.3:17733087-17733106 | MS.gene28225:intron | 25.0% |
| ! | TATGGTAACAATGTGAATTA+TGG | - | chr3.3:17733435-17733454 | MS.gene28225:intron | 25.0% |
| ! | TGCTATGATAAATCCATATT+GGG | - | chr3.3:17731035-17731054 | MS.gene28225:CDS | 25.0% |
| ! | TGGGATTCATTATAGTTAAT+CGG | + | chr3.3:17731665-17731684 | None:intergenic | 25.0% |
| ! | TTAATTATATAGGCAGTACT+GGG | + | chr3.3:17732273-17732292 | None:intergenic | 25.0% |
| ! | TTAATTGGCATTTGTAACAA+CGG | - | chr3.3:17732499-17732518 | MS.gene28225:CDS | 25.0% |
| ! | TTATTGTTCCTTCATTTGAT+AGG | - | chr3.3:17732345-17732364 | MS.gene28225:intron | 25.0% |
| !! | TCTCTAGTGTGTATTTATTT+TGG | - | chr3.3:17731604-17731623 | MS.gene28225:CDS | 25.0% |
| !!! | ATCTCATTGTTTTTATAGCA+AGG | - | chr3.3:17731341-17731360 | MS.gene28225:CDS | 25.0% |
| AAACAATGCAAATTATGGTG+CGG | - | chr3.3:17733092-17733111 | MS.gene28225:intron | 30.0% | |
| AACAACGGACAATATTACTT+TGG | - | chr3.3:17732514-17732533 | MS.gene28225:CDS | 30.0% | |
| ACAACGGACAATATTACTTT+GGG | - | chr3.3:17732515-17732534 | MS.gene28225:CDS | 30.0% | |
| AGCATTTGTATATGTGTACA+TGG | + | chr3.3:17731928-17731947 | None:intergenic | 30.0% | |
| AGTGATAACCATTATAGTAC+CGG | - | chr3.3:17733798-17733817 | MS.gene28225:intron | 30.0% | |
| ATTCAAATTGAAGACGTGTT+TGG | + | chr3.3:17730963-17730982 | None:intergenic | 30.0% | |
| ATTCTATATCACACATGGTA+TGG | + | chr3.3:17732248-17732267 | None:intergenic | 30.0% | |
| ATTCTTATCTTATGCCCTAA+GGG | - | chr3.3:17732678-17732697 | MS.gene28225:intron | 30.0% | |
| ATTTCTTGTAAAACCACGAT+AGG | - | chr3.3:17731010-17731029 | MS.gene28225:CDS | 30.0% | |
| CAATGTTCATTGGAATCAAT+TGG | + | chr3.3:17731685-17731704 | None:intergenic | 30.0% | |
| CTGCTATGATAAATCCATAT+TGG | - | chr3.3:17731034-17731053 | MS.gene28225:CDS | 30.0% | |
| GAAAGCAATTCTGTTAACTA+CGG | - | chr3.3:17733552-17733571 | MS.gene28225:intron | 30.0% | |
| GAAAGCAATTCTGTTAACTA+TGG | - | chr3.3:17733552-17733571 | MS.gene28225:intron | 30.0% | |
| GGGATTCATTATAGTTAATC+GGG | + | chr3.3:17731664-17731683 | None:intergenic | 30.0% | |
| GGTGCTAACAATGTAAATTA+TGG | - | chr3.3:17733603-17733622 | MS.gene28225:intron | 30.0% | |
| GTAAAAGCTCGACAATTATA+AGG | + | chr3.3:17732075-17732094 | None:intergenic | 30.0% | |
| TAAGCTTACACAATGTTCAT+TGG | + | chr3.3:17731695-17731714 | None:intergenic | 30.0% | |
| TACAAATGCTGAAACTACAT+AGG | - | chr3.3:17731938-17731957 | MS.gene28225:intron | 30.0% | |
| TATACATACGAGTTGTATCT+CGG | - | chr3.3:17731549-17731568 | MS.gene28225:CDS | 30.0% | |
| TATGGAAACACTTACAATGA+TGG | - | chr3.3:17732958-17732977 | MS.gene28225:intron | 30.0% | |
| TATGGAAACGATGCAAATTA+TGG | - | chr3.3:17733174-17733193 | MS.gene28225:CDS | 30.0% | |
| TGCTACTGTCAATATTAGTT+TGG | - | chr3.3:17732120-17732139 | MS.gene28225:intron | 30.0% | |
| TTGAACGTAACTATATGTGT+TGG | - | chr3.3:17730911-17730930 | MS.gene28225:CDS | 30.0% | |
| TTGAGAAACATATCGTGAAT+CGG | + | chr3.3:17731897-17731916 | None:intergenic | 30.0% | |
| ! | GCTACTGTCAATATTAGTTT+GGG | - | chr3.3:17732121-17732140 | MS.gene28225:intron | 30.0% |
| ! | TGTTACTTACAATACTGTTG+AGG | - | chr3.3:17731408-17731427 | MS.gene28225:CDS | 30.0% |
| ! | TGTTTTCTTTTTCCCTTCTA+GGG | - | chr3.3:17731247-17731266 | MS.gene28225:CDS | 30.0% |
| !! | CATGAAGGAACAATTTTAAC+TGG | + | chr3.3:17732401-17732420 | None:intergenic | 30.0% |
| !!! | AAGTTGATGCTTTTGCTAAA+CGG | - | chr3.3:17733997-17734016 | MS.gene28225:CDS | 30.0% |
| !!! | ATTATTTTTTTGGTAGTGGC+CGG | - | chr3.3:17732184-17732203 | MS.gene28225:intron | 30.0% |
| ACGTCTTCAATTTGAATTGC+CGG | - | chr3.3:17730966-17730985 | MS.gene28225:CDS | 35.0% | |
| AGCTCACAAACTTCATTCAA+TGG | + | chr3.3:17731968-17731987 | None:intergenic | 35.0% | |
| AGTAACAAAGCCAAATCCTT+TGG | + | chr3.3:17731395-17731414 | None:intergenic | 35.0% | |
| ATAATATATGCAAAGGTCCG+GGG | + | chr3.3:17732218-17732237 | None:intergenic | 35.0% | |
| ATAATTATGGATCGCGAAAC+TGG | - | chr3.3:17731364-17731383 | MS.gene28225:CDS | 35.0% | |
| ATGCAAATTCATGTGTTTGC+AGG | - | chr3.3:17731138-17731157 | MS.gene28225:CDS | 35.0% | |
| ATGCCAAGATAGGATCTTTA+TGG | - | chr3.3:17731082-17731101 | MS.gene28225:CDS | 35.0% | |
| ATTGAAAAGGACCTTTGTTG+AGG | - | chr3.3:17730780-17730799 | MS.gene28225:CDS | 35.0% | |
| CAACCATAAAGATCCTATCT+TGG | + | chr3.3:17731088-17731107 | None:intergenic | 35.0% | |
| CATAATATATGCAAAGGTCC+GGG | + | chr3.3:17732219-17732238 | None:intergenic | 35.0% | |
| CTCGACAATTATAAGGACAA+GGG | + | chr3.3:17732068-17732087 | None:intergenic | 35.0% | |
| GAAAGCAATGCTGTTAACTA+TGG | - | chr3.3:17733042-17733061 | MS.gene28225:intron | 35.0% | |
| GATTCTTATCTTATGCCCTA+AGG | - | chr3.3:17732677-17732696 | MS.gene28225:intron | 35.0% | |
| GCATAATATATGCAAAGGTC+CGG | + | chr3.3:17732220-17732239 | None:intergenic | 35.0% | |
| GGGAAATTCTATATCACACA+TGG | + | chr3.3:17732253-17732272 | None:intergenic | 35.0% | |
| GGTTATGGTAACTCTTCATA+CGG | - | chr3.3:17732871-17732890 | MS.gene28225:intron | 35.0% | |
| GTAAATTATGGTACTGCTGT+AGG | - | chr3.3:17733615-17733634 | MS.gene28225:intron | 35.0% | |
| GTAGAGTTGGGAGTTTATTA+AGG | - | chr3.3:17730585-17730604 | MS.gene28225:CDS | 35.0% | |
| TAACAGTGCAAATTATGGTG+CGG | - | chr3.3:17733515-17733534 | MS.gene28225:intron | 35.0% | |
| TACTTACAATACTGTTGAGG+AGG | - | chr3.3:17731411-17731430 | MS.gene28225:CDS | 35.0% | |
| TGGCAAAATTTACACCAACT+CGG | + | chr3.3:17732786-17732805 | None:intergenic | 35.0% | |
| TGTACGTGTATGCAATCATT+CGG | + | chr3.3:17731511-17731530 | None:intergenic | 35.0% | |
| TTGAAAAGGACCTTTGTTGA+GGG | - | chr3.3:17730781-17730800 | MS.gene28225:CDS | 35.0% | |
| TTTCTTATCTTGTGCCCTTA+GGG | + | chr3.3:17732556-17732575 | None:intergenic | 35.0% | |
| ! | ACTTTTGTGTCTAATCATCC+AGG | - | chr3.3:17732093-17732112 | MS.gene28225:intron | 35.0% |
| ! | CTGTTTTCTTTTTCCCTTCT+AGG | - | chr3.3:17731246-17731265 | MS.gene28225:CDS | 35.0% |
| ! | GTTTTCTTTTTCCCTTCTAG+GGG | - | chr3.3:17731248-17731267 | MS.gene28225:CDS | 35.0% |
| ! | TTTTCTTTTTCCCTTCTAGG+GGG | - | chr3.3:17731249-17731268 | MS.gene28225:CDS | 35.0% |
| !! | AGTTGATGCTTTTGCTAAAC+GGG | - | chr3.3:17733998-17734017 | MS.gene28225:CDS | 35.0% |
| !! | GAAAGCATTGCTGTTAACTA+TGG | - | chr3.3:17733129-17733148 | MS.gene28225:intron | 35.0% |
| !!! | AATTTTAACTGGAGACCACA+TGG | + | chr3.3:17732390-17732409 | None:intergenic | 35.0% |
| !!! | AGCGATGCTTTTTCAAGATA+TGG | - | chr3.3:17731192-17731211 | MS.gene28225:CDS | 35.0% |
| !!! | TTTTGTTTTCAGGATCTGCA+TGG | - | chr3.3:17732757-17732776 | MS.gene28225:intron | 35.0% |
| AATAACAGCATGCAACGACA+AGG | + | chr3.3:17732330-17732349 | None:intergenic | 40.0% | |
| AATACCAAGCTGTTTGTAGG+AGG | - | chr3.3:17730698-17730717 | MS.gene28225:CDS | 40.0% | |
| AGATATGGCCAAGTTCTTGA+CGG | - | chr3.3:17731207-17731226 | MS.gene28225:CDS | 40.0% | |
| ATGGCTTTCTTTGGTAGAGT+TGG | - | chr3.3:17730572-17730591 | MS.gene28225:CDS | 40.0% | |
| CAGATGAGCCTATCAAATGA+AGG | + | chr3.3:17732356-17732375 | None:intergenic | 40.0% | |
| CCTACAAACAGCTTGGTATT+GGG | + | chr3.3:17730698-17730717 | None:intergenic | 40.0% | |
| GAAAGCAATGCTGGTAACTA+TGG | - | chr3.3:17733216-17733235 | MS.gene28225:CDS | 40.0% | |
| GCTCGACAATTATAAGGACA+AGG | + | chr3.3:17732069-17732088 | None:intergenic | 40.0% | |
| GGTGGAAACGATGCAAATTA+TGG | - | chr3.3:17733000-17733019 | MS.gene28225:intron | 40.0% | |
| GGTGGTAACAGTGCAAATTA+TGG | - | chr3.3:17733510-17733529 | MS.gene28225:intron | 40.0% | |
| GTTAACTATGGTATTGCTCC+TGG | - | chr3.3:17733738-17733757 | MS.gene28225:intron | 40.0% | |
| GTTTCTTATCTTGTGCCCTT+AGG | + | chr3.3:17732557-17732576 | None:intergenic | 40.0% | |
| TATGATAGAACTGGAGGACT+TGG | - | chr3.3:17733930-17733949 | MS.gene28225:CDS | 40.0% | |
| TATGGTAACTCTTCATACGG+TGG | - | chr3.3:17732874-17732893 | MS.gene28225:intron | 40.0% | |
| TATTGACAGTAGCAGTAACC+TGG | + | chr3.3:17732114-17732133 | None:intergenic | 40.0% | |
| TCCTACAAACAGCTTGGTAT+TGG | + | chr3.3:17730699-17730718 | None:intergenic | 40.0% | |
| TCTGTGAGAAGATATCCATG+TGG | - | chr3.3:17732372-17732391 | MS.gene28225:intron | 40.0% | |
| TGGCTTTCTTTGGTAGAGTT+GGG | - | chr3.3:17730573-17730592 | MS.gene28225:CDS | 40.0% | |
| TTATCATAGCAGACCTATCG+TGG | + | chr3.3:17731026-17731045 | None:intergenic | 40.0% | |
| TTTCCATAACCACCAACACT+AGG | + | chr3.3:17733162-17733181 | None:intergenic | 40.0% | |
| ! | AAATGCTAACTTGTGCCCTT+AGG | + | chr3.3:17732696-17732715 | None:intergenic | 40.0% |
| ! | AATGCTAACTTGTGCCCTTA+GGG | + | chr3.3:17732695-17732714 | None:intergenic | 40.0% |
| ! | CATCTGTTTTCCAAGCCATA+CGG | - | chr3.3:17730657-17730676 | MS.gene28225:CDS | 40.0% |
| ! | CATGACAGGGTTTAAAACAG+GGG | + | chr3.3:17731065-17731084 | None:intergenic | 40.0% |
| ! | GATAACCATTATAGTACCGG+TGG | - | chr3.3:17733801-17733820 | MS.gene28225:intron | 40.0% |
| ! | GCATGACAGGGTTTAAAACA+GGG | + | chr3.3:17731066-17731085 | None:intergenic | 40.0% |
| ! | GTATGGCTTGGAAAACAGAT+GGG | + | chr3.3:17730658-17730677 | None:intergenic | 40.0% |
| ! | TACAATGATGGAACTACCAG+TGG | - | chr3.3:17732970-17732989 | MS.gene28225:intron | 40.0% |
| ! | TATGGCTTGGAAAACAGATG+GGG | + | chr3.3:17730657-17730676 | None:intergenic | 40.0% |
| !! | AATTATGGTGCTGTTGTAGG+CGG | - | chr3.3:17733189-17733208 | MS.gene28225:CDS | 40.0% |
| !! | ACTTCCAGGGTATTGATTAC+GGG | + | chr3.3:17733856-17733875 | None:intergenic | 40.0% |
| !! | CACTTCCAGGGTATTGATTA+CGG | + | chr3.3:17733857-17733876 | None:intergenic | 40.0% |
| !! | CTTGTTAACTTGTGCCCTAA+GGG | - | chr3.3:17732539-17732558 | MS.gene28225:CDS | 40.0% |
| !! | GCAAATTATGGTGCTGTTGT+AGG | - | chr3.3:17733186-17733205 | MS.gene28225:CDS | 40.0% |
| !! | TCTTGTTAACTTGTGCCCTA+AGG | - | chr3.3:17732538-17732557 | MS.gene28225:CDS | 40.0% |
| !! | TTGAAGACGTGTTTGGTGTT+TGG | + | chr3.3:17730956-17730975 | None:intergenic | 40.0% |
| !! | TTTCTTTTTCCCTTCTAGGG+GGG | - | chr3.3:17731250-17731269 | MS.gene28225:CDS | 40.0% |
| AAACAGGGGCAAACCCAATA+TGG | + | chr3.3:17731051-17731070 | None:intergenic | 45.0% | |
| AAACCCTGTCATGCCAAGAT+AGG | - | chr3.3:17731072-17731091 | MS.gene28225:CDS | 45.0% | |
| AACAGTGCCAATTACAGTGG+TGG | - | chr3.3:17733702-17733721 | MS.gene28225:intron | 45.0% | |
| AAGGTCCATCAAAACCACCA+CGG | + | chr3.3:17732819-17732838 | None:intergenic | 45.0% | |
| ACAACTCACCGTCAAGAACT+TGG | + | chr3.3:17731218-17731237 | None:intergenic | 45.0% | |
| ACTACACAGCTATGTAGCAC+CGG | + | chr3.3:17730988-17731007 | None:intergenic | 45.0% | |
| ACTGGTAGGTCCAAAGGATT+TGG | - | chr3.3:17731382-17731401 | MS.gene28225:CDS | 45.0% | |
| ACTGTGAGAACCCTCAACAA+AGG | + | chr3.3:17730794-17730813 | None:intergenic | 45.0% | |
| AGAACTGGAGGACTTGGATA+CGG | - | chr3.3:17733936-17733955 | MS.gene28225:CDS | 45.0% | |
| AGATCCTATCTTGGCATGAC+AGG | + | chr3.3:17731079-17731098 | None:intergenic | 45.0% | |
| ATTACGGGAGAAACCATTGC+TGG | + | chr3.3:17733841-17733860 | None:intergenic | 45.0% | |
| CAACACCACCGGTACTATAA+TGG | + | chr3.3:17733809-17733828 | None:intergenic | 45.0% | |
| CCCAATACCAAGCTGTTTGT+AGG | - | chr3.3:17730695-17730714 | MS.gene28225:CDS | 45.0% | |
| GATCCTATCTTGGCATGACA+GGG | + | chr3.3:17731078-17731097 | None:intergenic | 45.0% | |
| GCAAATTATGGTGCAGCTGT+AGG | - | chr3.3:17733360-17733379 | MS.gene28225:intron | 45.0% | |
| GCAACACATTCACCAGACAT+TGG | - | chr3.3:17730842-17730861 | MS.gene28225:CDS | 45.0% | |
| GCTGCTGATACTGCTAACTA+TGG | - | chr3.3:17733459-17733478 | MS.gene28225:intron | 45.0% | |
| GCTTTCTCCACCACTGTAAT+TGG | + | chr3.3:17733712-17733731 | None:intergenic | 45.0% | |
| GGTAACAGTGCCAATTACAG+TGG | - | chr3.3:17733699-17733718 | MS.gene28225:intron | 45.0% | |
| GGTGGATATGATAGAACTGG+AGG | - | chr3.3:17733924-17733943 | MS.gene28225:CDS | 45.0% | |
| GGTGGATATTCAGGTGGTTA+TGG | - | chr3.3:17732856-17732875 | MS.gene28225:intron | 45.0% | |
| GTAACTCTTCATACGGTGGT+GGG | - | chr3.3:17732878-17732897 | MS.gene28225:intron | 45.0% | |
| GTTAACTATGGTAGTCCTCC+TGG | - | chr3.3:17733054-17733073 | MS.gene28225:intron | 45.0% | |
| TATACCCTGTTGCACTTCCA+GGG | + | chr3.3:17733869-17733888 | None:intergenic | 45.0% | |
| TATGGTATTGCTCCTGGTGT+TGG | - | chr3.3:17733744-17733763 | MS.gene28225:intron | 45.0% | |
| TTACCATAACCACCAACACC+AGG | + | chr3.3:17733423-17733442 | None:intergenic | 45.0% | |
| TTACGGGAGAAACCATTGCT+GGG | + | chr3.3:17733840-17733859 | None:intergenic | 45.0% | |
| TTATGGATCGCGAAACTGGT+AGG | - | chr3.3:17731368-17731387 | MS.gene28225:CDS | 45.0% | |
| TTCTCCCGTAATCAATACCC+TGG | - | chr3.3:17733849-17733868 | MS.gene28225:intron | 45.0% | |
| TTTCCATAACCACCAACACC+AGG | + | chr3.3:17733075-17733094 | None:intergenic | 45.0% | |
| ! | AATACCCTGGAAGTGCAACA+GGG | - | chr3.3:17733862-17733881 | MS.gene28225:intron | 45.0% |
| ! | AATGATGGAACTACCAGTGG+TGG | - | chr3.3:17732973-17732992 | MS.gene28225:intron | 45.0% |
| ! | CGTATGGCTTGGAAAACAGA+TGG | + | chr3.3:17730659-17730678 | None:intergenic | 45.0% |
| ! | GCTGGTGGATATGATAGAAC+TGG | - | chr3.3:17733921-17733940 | MS.gene28225:CDS | 45.0% |
| ! | GGCATGACAGGGTTTAAAAC+AGG | + | chr3.3:17731067-17731086 | None:intergenic | 45.0% |
| ! | GTTAACTATGGTAGTGCACC+TGG | - | chr3.3:17733657-17733676 | MS.gene28225:intron | 45.0% |
| ! | GTTAACTATGGTAGTGCTCC+TGG | - | chr3.3:17733141-17733160 | MS.gene28225:CDS | 45.0% |
| ! | TATAGTGGTAATGCTGCTGG+AGG | - | chr3.3:17732919-17732938 | MS.gene28225:intron | 45.0% |
| ! | TATGGTAGTGCTCCTAGTGT+TGG | - | chr3.3:17733147-17733166 | MS.gene28225:CDS | 45.0% |
| ! | TTTGATGGACCTTATGGTGG+TGG | - | chr3.3:17732826-17732845 | MS.gene28225:intron | 45.0% |
| !! | AATTATGGTGCTGCTGTAGG+CGG | - | chr3.3:17733015-17733034 | MS.gene28225:intron | 45.0% |
| !! | CATTATAGTACCGGTGGTGT+TGG | - | chr3.3:17733807-17733826 | MS.gene28225:intron | 45.0% |
| !! | GCAAATTATGGTGCTGCTGT+AGG | - | chr3.3:17733012-17733031 | MS.gene28225:intron | 45.0% |
| !! | GGTTTTGATGGACCTTATGG+TGG | - | chr3.3:17732823-17732842 | MS.gene28225:intron | 45.0% |
| !!! | GGTGGTTTTGATGGACCTTA+TGG | - | chr3.3:17732820-17732839 | MS.gene28225:intron | 45.0% |
| AATGCTGCTGGAGGTTATGG+CGG | - | chr3.3:17732928-17732947 | MS.gene28225:intron | 50.0% | |
| AATTATGGTGCGGCTGTAGG+CGG | - | chr3.3:17733276-17733295 | MS.gene28225:intron | 50.0% | |
| AATTATGGTGCGGCTGTAGG+TGG | - | chr3.3:17733276-17733295 | MS.gene28225:intron | 50.0% | |
| ACTACCAGTGGTGGTTATGG+TGG | - | chr3.3:17732982-17733001 | MS.gene28225:intron | 50.0% | |
| AGGTCCATCAAAACCACCAC+GGG | + | chr3.3:17732818-17732837 | None:intergenic | 50.0% | |
| AGTGCAACAGGGTATAGCAG+TGG | - | chr3.3:17733873-17733892 | MS.gene28225:intron | 50.0% | |
| CAACTGAATCCCCCCTAGAA+GGG | + | chr3.3:17731262-17731281 | None:intergenic | 50.0% | |
| CTATACCCTGTTGCACTTCC+AGG | + | chr3.3:17733870-17733889 | None:intergenic | 50.0% | |
| CTCACCTCCTACAAACAGCT+TGG | + | chr3.3:17730705-17730724 | None:intergenic | 50.0% | |
| GCAAATTATGGTGCGGCTGT+AGG | - | chr3.3:17733273-17733292 | MS.gene28225:intron | 50.0% | |
| GCTCCTGTTGCTGGTGTTTA+CGG | - | chr3.3:17733579-17733598 | MS.gene28225:intron | 50.0% | |
| GGAACTACCAGTGGTGGTTA+TGG | - | chr3.3:17732979-17732998 | MS.gene28225:intron | 50.0% | |
| GGACTTGGATACGGTGAAAG+TGG | - | chr3.3:17733945-17733964 | MS.gene28225:CDS | 50.0% | |
| GGTAACTATGGTAGTCCTCC+TGG | - | chr3.3:17733228-17733247 | MS.gene28225:intron | 50.0% | |
| GGTAACTCTTCATACGGTGG+TGG | - | chr3.3:17732877-17732896 | MS.gene28225:intron | 50.0% | |
| GGTAATGCTGCTGGAGGTTA+TGG | - | chr3.3:17732925-17732944 | MS.gene28225:intron | 50.0% | |
| GTCTGGTGAATGTGTTGCGT+CGG | + | chr3.3:17730840-17730859 | None:intergenic | 50.0% | |
| GTTTCCACCATAACCACCAC+TGG | + | chr3.3:17732989-17733008 | None:intergenic | 50.0% | |
| TATGGTAGTCCTCCTGGTGT+TGG | - | chr3.3:17733060-17733079 | MS.gene28225:intron | 50.0% | |
| TCAACTGAATCCCCCCTAGA+AGG | + | chr3.3:17731263-17731282 | None:intergenic | 50.0% | |
| TTTGCCAATGAAAGACCCCG+TGG | - | chr3.3:17732799-17732818 | MS.gene28225:intron | 50.0% | |
| ! | ATCAAGTGCCATTCAGGCCT+TGG | - | chr3.3:17731435-17731454 | MS.gene28225:CDS | 50.0% |
| ! | CAATACCCTGGAAGTGCAAC+AGG | - | chr3.3:17733861-17733880 | MS.gene28225:intron | 50.0% |
| ! | GGCTATAGTGGTAATGCTGC+TGG | - | chr3.3:17732916-17732935 | MS.gene28225:intron | 50.0% |
| ! | TATGGTAGTGCACCTGGTGT+TGG | - | chr3.3:17733663-17733682 | MS.gene28225:intron | 50.0% |
| ! | TATGGTAGTGCTCCTGGTGT+TGG | - | chr3.3:17733321-17733340 | MS.gene28225:intron | 50.0% |
| ! | TGGTGGGTATGGTAATGCTG+CGG | - | chr3.3:17732894-17732913 | MS.gene28225:intron | 50.0% |
| !! | ATAGTACCGGTGGTGTTGGT+GGG | - | chr3.3:17733811-17733830 | MS.gene28225:intron | 50.0% |
| !! | GCTCCTAGTGTTGGTGGTTA+TGG | - | chr3.3:17733156-17733175 | MS.gene28225:CDS | 50.0% |
| !! | TACGGGTTAGTGCCAATGTC+TGG | + | chr3.3:17730857-17730876 | None:intergenic | 50.0% |
| !! | TATAGTACCGGTGGTGTTGG+TGG | - | chr3.3:17733810-17733829 | MS.gene28225:intron | 50.0% |
| !! | TATGGTGCTGCTGCTGGATT+TGG | - | chr3.3:17733771-17733790 | MS.gene28225:intron | 50.0% |
| !! | TCTTCATACGGTGGTGGGTA+TGG | - | chr3.3:17732883-17732902 | MS.gene28225:intron | 50.0% |
| AAGGTCCGGGGTTCGAATTC+CGG | + | chr3.3:17732206-17732225 | None:intergenic | 55.0% | |
| ACCACCACGGGGTCTTTCAT+TGG | + | chr3.3:17732806-17732825 | None:intergenic | 55.0% | |
| CAAGCCATACGGTGCTTCTC+GGG | - | chr3.3:17730668-17730687 | MS.gene28225:CDS | 55.0% | |
| CCAAGCCATACGGTGCTTCT+CGG | - | chr3.3:17730667-17730686 | MS.gene28225:CDS | 55.0% | |
| CCACCATAACCACCAACACC+AGG | + | chr3.3:17733492-17733511 | None:intergenic | 55.0% | |
| CCACCGTAAACACCAGCAAC+AGG | + | chr3.3:17733585-17733604 | None:intergenic | 55.0% | |
| CCATAACCACCAACACCAGG+AGG | + | chr3.3:17733072-17733091 | None:intergenic | 55.0% | |
| CCTGTTGCTGGTGTTTACGG+TGG | - | chr3.3:17733582-17733601 | MS.gene28225:intron | 55.0% | |
| CGCGAAACTGGTAGGTCCAA+AGG | - | chr3.3:17731376-17731395 | MS.gene28225:CDS | 55.0% | |
| CTAGGGGGGATTCAGTTGAG+AGG | - | chr3.3:17731264-17731283 | MS.gene28225:CDS | 55.0% | |
| CTGAGTTACCTGGCCATCCA+AGG | + | chr3.3:17731455-17731474 | None:intergenic | 55.0% | |
| GCACCATAACCACCAACACC+AGG | + | chr3.3:17733759-17733778 | None:intergenic | 55.0% | |
| GCTAACTATGGCAGTGCTCC+TGG | - | chr3.3:17733471-17733490 | MS.gene28225:intron | 55.0% | |
| GGTCCATCAAAACCACCACG+GGG | + | chr3.3:17732817-17732836 | None:intergenic | 55.0% | |
| TACGGTAGTGCTCCTGTTGC+TGG | - | chr3.3:17733570-17733589 | MS.gene28225:intron | 55.0% | |
| TATGGCAGTGCTCCTGGTGT+TGG | - | chr3.3:17733477-17733496 | MS.gene28225:intron | 55.0% | |
| TATGGTGCAGCTGTAGGCAG+TGG | - | chr3.3:17733366-17733385 | MS.gene28225:intron | 55.0% | |
| ! | AGTGCCATTCAGGCCTTGGA+TGG | - | chr3.3:17731439-17731458 | MS.gene28225:CDS | 55.0% |
| ! | GGTAATGCTGCGGGCTATAG+TGG | - | chr3.3:17732904-17732923 | MS.gene28225:intron | 55.0% |
| ! | GGTAGTGCTCCTAGTGTTGG+TGG | - | chr3.3:17733150-17733169 | MS.gene28225:CDS | 55.0% |
| ! | GGTATTGCTCCTGGTGTTGG+TGG | - | chr3.3:17733747-17733766 | MS.gene28225:intron | 55.0% |
| ! | GGTGGGTATGGTAATGCTGC+GGG | - | chr3.3:17732895-17732914 | MS.gene28225:intron | 55.0% |
| ! | GGTTATGGCGGAGGTGGTTA+TGG | - | chr3.3:17732940-17732959 | MS.gene28225:intron | 55.0% |
| !! | AGTACCCGAGAAGCACCGTA+TGG | + | chr3.3:17730675-17730694 | None:intergenic | 55.0% |
| !! | CCTCCTGGTGTTGGTGGTTA+TGG | - | chr3.3:17733069-17733088 | MS.gene28225:intron | 55.0% |
| !! | CCTGGTGTTGGTGGTTATGG+TGG | - | chr3.3:17733072-17733091 | MS.gene28225:intron | 55.0% |
| !! | GATGGACCTTATGGTGGTGG+AGG | - | chr3.3:17732829-17732848 | MS.gene28225:intron | 55.0% |
| !! | GCACCTGGTGTTGGTGGTTA+TGG | - | chr3.3:17733672-17733691 | MS.gene28225:intron | 55.0% |
| !! | GCTCCTGGTGTTGGTGGTTA+TGG | - | chr3.3:17733330-17733349 | MS.gene28225:intron | 55.0% |
| !! | GGAGGCATCAAGTGCCATTC+AGG | - | chr3.3:17731429-17731448 | MS.gene28225:CDS | 55.0% |
| !! | GGAGGTGGTGGTGGATATTC+AGG | - | chr3.3:17732847-17732866 | MS.gene28225:intron | 55.0% |
| !! | GGTGGTGGTGGATATTCAGG+TGG | - | chr3.3:17732850-17732869 | MS.gene28225:intron | 55.0% |
| !! | GGTGTTGGTGGTTATGGTGG+TGG | - | chr3.3:17733492-17733511 | MS.gene28225:intron | 55.0% |
| !! | TAGTACCGGTGGTGTTGGTG+GGG | - | chr3.3:17733812-17733831 | MS.gene28225:intron | 55.0% |
| !! | TATGGTGCTGTTGTAGGCGG+TGG | - | chr3.3:17733192-17733211 | MS.gene28225:CDS | 55.0% |
| !!! | AGACCCCGTGGTGGTTTTGA+TGG | - | chr3.3:17732811-17732830 | MS.gene28225:intron | 55.0% |
| AGCAGTGGCAGTTCAGCTCC+CGG | - | chr3.3:17733888-17733907 | MS.gene28225:CDS | 60.0% | |
| AGTGGCCGGAATTCGAACCC+CGG | - | chr3.3:17732198-17732217 | MS.gene28225:intron | 60.0% | |
| CATTCAGGCCTTGGATGGCC+AGG | - | chr3.3:17731444-17731463 | MS.gene28225:CDS | 60.0% | |
| CCACCACCTCCACCACCATA+AGG | + | chr3.3:17732838-17732857 | None:intergenic | 60.0% | |
| CTGGCCATCCAAGGCCTGAA+TGG | + | chr3.3:17731446-17731465 | None:intergenic | 60.0% | |
| GATCTGCATGGTCGCCGAGT+TGG | - | chr3.3:17732769-17732788 | MS.gene28225:intron | 60.0% | |
| GCCAATGAAAGACCCCGTGG+TGG | - | chr3.3:17732802-17732821 | MS.gene28225:intron | 60.0% | |
| GGCGGTGGTGAAAGCAATGC+TGG | - | chr3.3:17733033-17733052 | MS.gene28225:intron | 60.0% | |
| TATGGTGCGGCTGTAGGTGG+TGG | - | chr3.3:17733528-17733547 | MS.gene28225:intron | 60.0% | |
| TCCACCAGCAAAGCTGCTCC+CGG | + | chr3.3:17733910-17733929 | None:intergenic | 60.0% | |
| ! | GGTAGTCCTCCTGGTGTTGG+TGG | - | chr3.3:17733063-17733082 | MS.gene28225:intron | 60.0% |
| ! | GGTAGTGCACCTGGTGTTGG+TGG | - | chr3.3:17733666-17733685 | MS.gene28225:intron | 60.0% |
| ! | GGTAGTGCTCCTGGTGTTGG+TGG | - | chr3.3:17733324-17733343 | MS.gene28225:intron | 60.0% |
| !! | AGTACCGGTGGTGTTGGTGG+GGG | - | chr3.3:17733813-17733832 | MS.gene28225:intron | 60.0% |
| !! | CCGAGAAGCACCGTATGGCT+TGG | + | chr3.3:17730670-17730689 | None:intergenic | 60.0% |
| !! | CCTTATGGTGGTGGAGGTGG+TGG | - | chr3.3:17732835-17732854 | MS.gene28225:intron | 60.0% |
| !! | GGACCTTATGGTGGTGGAGG+TGG | - | chr3.3:17732832-17732851 | MS.gene28225:intron | 60.0% |
| !! | GGTGGTTATGGTGCTGCTGC+TGG | - | chr3.3:17733765-17733784 | MS.gene28225:intron | 60.0% |
| !! | TATGGTGCTGCTGTAGGCGG+TGG | - | chr3.3:17733018-17733037 | MS.gene28225:intron | 60.0% |
| !! | TATGGTGGTGGAGGTGGTGG+TGG | - | chr3.3:17732838-17732857 | MS.gene28225:intron | 60.0% |
| CCACCAGCAAAGCTGCTCCC+GGG | + | chr3.3:17733909-17733928 | None:intergenic | 65.0% | |
| GCAGTGGCAGTTCAGCTCCC+GGG | - | chr3.3:17733889-17733908 | MS.gene28225:CDS | 65.0% | |
| GCTGCTGGAGGTTATGGCGG+AGG | - | chr3.3:17732931-17732950 | MS.gene28225:intron | 65.0% | |
| TATGGTGCGGCTGTAGGCGG+TGG | - | chr3.3:17733279-17733298 | MS.gene28225:intron | 65.0% | |
| ! | GCTGGAGGTTATGGCGGAGG+TGG | - | chr3.3:17732934-17732953 | MS.gene28225:intron | 65.0% |
| ! | GGCAGTGCTCCTGGTGTTGG+TGG | - | chr3.3:17733480-17733499 | MS.gene28225:intron | 65.0% |
| ! | GTTGGTGGGGGTCCCAGCAA+TGG | - | chr3.3:17733825-17733844 | MS.gene28225:intron | 65.0% |
| CCCGGGAGCAGCTTTGCTGG+TGG | - | chr3.3:17733906-17733925 | MS.gene28225:CDS | 70.0% | |
| GCTCCCGGGAGCAGCTTTGC+TGG | - | chr3.3:17733903-17733922 | MS.gene28225:CDS | 70.0% | |
| GGGACCCCCACCAACACCAC+CGG | + | chr3.3:17733820-17733839 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 17730572 | 17734025 | 17730572 | ID=MS.gene28225 |
| chr3.3 | mRNA | 17730572 | 17734025 | 17730572 | ID=MS.gene28225.t1;Parent=MS.gene28225 |
| chr3.3 | exon | 17733878 | 17734025 | 17733878 | ID=MS.gene28225.t1.exon1;Parent=MS.gene28225.t1 |
| chr3.3 | CDS | 17733878 | 17734025 | 17733878 | ID=cds.MS.gene28225.t1;Parent=MS.gene28225.t1 |
| chr3.3 | exon | 17733369 | 17733437 | 17733369 | ID=MS.gene28225.t1.exon2;Parent=MS.gene28225.t1 |
| chr3.3 | CDS | 17733369 | 17733437 | 17733369 | ID=cds.MS.gene28225.t1;Parent=MS.gene28225.t1 |
| chr3.3 | exon | 17733132 | 17733238 | 17733132 | ID=MS.gene28225.t1.exon3;Parent=MS.gene28225.t1 |
| chr3.3 | CDS | 17733132 | 17733238 | 17733132 | ID=cds.MS.gene28225.t1;Parent=MS.gene28225.t1 |
| chr3.3 | exon | 17732483 | 17732576 | 17732483 | ID=MS.gene28225.t1.exon4;Parent=MS.gene28225.t1 |
| chr3.3 | CDS | 17732483 | 17732576 | 17732483 | ID=cds.MS.gene28225.t1;Parent=MS.gene28225.t1 |
| chr3.3 | exon | 17730572 | 17731728 | 17730572 | ID=MS.gene28225.t1.exon5;Parent=MS.gene28225.t1 |
| chr3.3 | CDS | 17730572 | 17731728 | 17730572 | ID=cds.MS.gene28225.t1;Parent=MS.gene28225.t1 |
| Gene Sequence |
| Protein sequence |
