AlfalfaGEDB | MS.gene28621

M. sativa cultivar XinJiangDaYe / MS.gene28621

KEGG: K03768
GO: GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0006457 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0071704 GO:0140096 GO:1901564
PFAM: PF00160.24

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28621.t1	XP_003626095.2	95.7	257	10	1	1	257	6	261	1.10E-135	492.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28621.t1	Q41651	68.6	258	70	4	1	257	1	248	5.3e-91	335.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28621.t1	G7KVH0	95.7	257	10	1	1	257	6	261	7.7e-136	492.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049822	MS.gene28621	0.81525	1.02E-51	-1.69E-46
MS.gene04984	MS.gene28621	0.808015	3.81E-50	-1.69E-46
MS.gene050114	MS.gene28621	0.818114	2.32E-52	-1.69E-46
MS.gene050317	MS.gene28621	0.812832	3.48E-51	-1.69E-46
MS.gene055311	MS.gene28621	0.802654	5.06E-49	-1.69E-46
MS.gene057452	MS.gene28621	-0.80538	1.37E-49	-1.69E-46
MS.gene058182	MS.gene28621	0.802978	4.34E-49	-1.69E-46
MS.gene058278	MS.gene28621	0.819225	1.30E-52	-1.69E-46
MS.gene058758	MS.gene28621	0.827176	1.81E-54	-1.69E-46
MS.gene059050	MS.gene28621	0.811122	8.20E-51	-1.69E-46
MS.gene059719	MS.gene28621	0.828286	9.78E-55	-1.69E-46
MS.gene060869	MS.gene28621	0.810687	1.02E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28621.t1	MTR_7g110980	95.720	257	10	1	1	257	6	261	0.0	504
MS.gene28621.t1	MTR_1g085560	70.543	258	68	6	1	257	1	251	5.95e-117	335
MS.gene28621.t1	MTR_1g117010	66.310	187	60	1	72	255	57	243	4.12e-88	261
MS.gene28621.t1	MTR_1g117010	66.310	187	60	1	72	255	57	243	4.12e-88	261
MS.gene28621.t1	MTR_3g463900	60.870	184	60	3	83	255	21	203	7.52e-73	221
MS.gene28621.t1	MTR_3g070500	62.573	171	56	2	90	253	62	231	5.45e-70	215
MS.gene28621.t1	MTR_4g075290	59.064	171	62	2	90	253	2	171	8.29e-68	207
MS.gene28621.t1	MTR_3g117750	59.064	171	62	2	93	256	13	182	4.86e-66	204
MS.gene28621.t1	MTR_7g116340	60.714	168	58	2	93	253	5	171	1.05e-65	202
MS.gene28621.t1	MTR_8g040180	57.576	165	64	2	95	253	21	185	9.05e-62	192
MS.gene28621.t1	MTR_4g086760	56.140	171	67	1	92	254	4	174	1.68e-60	195
MS.gene28621.t1	MTR_4g086760	56.140	171	67	1	92	254	4	174	1.84e-60	193
MS.gene28621.t1	MTR_4g086760	56.140	171	67	1	92	254	4	174	2.36e-60	194
MS.gene28621.t1	MTR_7g095750	58.333	168	61	2	94	253	9	175	1.19e-59	199
MS.gene28621.t1	MTR_8g079690	55.030	169	68	1	93	253	5	173	1.96e-59	192
MS.gene28621.t1	MTR_4g073650	48.404	188	89	2	74	254	29	215	5.78e-58	184
MS.gene28621.t1	MTR_3g070500	66.929	127	35	1	90	209	62	188	8.71e-55	175
MS.gene28621.t1	MTR_2g085075	54.054	148	63	4	104	250	469	612	4.74e-43	154
MS.gene28621.t1	MTR_3g070500	64.706	102	29	1	90	184	62	163	4.35e-39	134
MS.gene28621.t1	MTR_3g070500	64.356	101	29	1	90	183	62	162	8.56e-39	133
MS.gene28621.t1	MTR_3g107660	46.784	171	82	2	95	257	13	182	2.32e-38	142
MS.gene28621.t1	MTR_7g105220	49.315	146	69	4	104	248	17	158	4.30e-38	131
MS.gene28621.t1	MTR_3g085705	62.626	99	32	3	138	236	27	120	5.08e-38	130
MS.gene28621.t1	MTR_1g011980	43.716	183	87	4	86	257	1	178	1.05e-37	140
MS.gene28621.t1	MTR_8g036015	50.345	145	67	4	104	247	8	148	8.03e-34	120
MS.gene28621.t1	MTR_5g015500	45.833	144	73	4	106	248	314	453	3.80e-29	115
MS.gene28621.t1	MTR_5g015500	45.833	144	73	4	106	248	354	493	6.31e-29	115
MS.gene28621.t1	MTR_2g023120	43.333	150	74	7	106	250	22	165	7.45e-21	91.7
MS.gene28621.t1	MTR_6g084140	40.602	133	66	5	104	227	25	153	8.05e-18	82.8
MS.gene28621.t1	MTR_6g084140	40.602	133	66	5	104	227	8	136	9.97e-18	82.8
MS.gene28621.t1	MTR_8g442420	39.850	133	67	5	104	227	8	136	1.40e-16	79.3
MS.gene28621.t1	MTR_1g094065	35.294	153	78	7	104	250	87	224	1.71e-15	73.9
MS.gene28621.t1	MTR_2g461260	31.333	150	84	6	105	235	91	240	8.83e-15	72.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28621.t1	AT3G62030	60.465	258	100	1	1	256	1	258	8.26e-108	312
MS.gene28621.t1	AT3G62030	60.232	259	100	1	1	256	1	259	1.41e-107	311
MS.gene28621.t1	AT3G62030	69.585	217	59	3	45	257	100	313	2.02e-104	305
MS.gene28621.t1	AT5G13120	62.304	191	69	1	68	255	66	256	5.81e-87	259
MS.gene28621.t1	AT5G13120	62.304	191	69	1	68	255	62	252	8.06e-87	259
MS.gene28621.t1	AT5G58710	60.963	187	61	3	76	255	23	204	7.64e-74	224
MS.gene28621.t1	AT2G29960	60.428	187	66	2	76	255	16	201	2.70e-73	223
MS.gene28621.t1	AT2G29960	60.428	187	66	2	76	255	16	201	2.70e-73	223
MS.gene28621.t1	AT2G21130	61.905	168	56	2	93	253	6	172	7.82e-70	213
MS.gene28621.t1	AT4G38740	59.524	168	60	2	93	253	5	171	1.88e-67	206
MS.gene28621.t1	AT3G56070	60.714	168	58	2	93	253	5	171	2.82e-67	206
MS.gene28621.t1	AT3G56070	60.714	168	58	2	93	253	5	171	2.82e-67	206
MS.gene28621.t1	AT2G16600	58.824	170	58	3	93	253	6	172	4.17e-67	206
MS.gene28621.t1	AT3G55920	53.234	201	76	3	72	255	29	228	8.22e-67	207
MS.gene28621.t1	AT2G29960	56.150	187	64	3	76	255	16	191	4.23e-64	199
MS.gene28621.t1	AT4G34870	54.913	173	60	3	93	253	5	171	3.35e-60	188
MS.gene28621.t1	AT2G15790	56.140	171	67	1	92	254	4	174	9.11e-60	193
MS.gene28621.t1	AT3G63400	55.429	175	69	2	86	252	1	174	1.23e-59	194
MS.gene28621.t1	AT2G38730	55.758	165	67	2	95	253	35	199	1.59e-58	185
MS.gene28621.t1	AT3G63400	55.429	175	69	2	86	252	1	174	3.08e-58	194
MS.gene28621.t1	AT3G63400	55.429	175	69	2	86	252	1	174	3.08e-58	194
MS.gene28621.t1	AT3G63400	55.429	175	69	2	86	252	1	174	3.08e-58	194
MS.gene28621.t1	AT4G34960	51.429	175	78	1	89	256	44	218	5.76e-57	182
MS.gene28621.t1	AT2G16600	53.988	163	55	3	93	253	6	150	4.11e-56	177
MS.gene28621.t1	AT4G34960	55.469	128	50	1	89	209	44	171	1.19e-44	148
MS.gene28621.t1	AT3G44600	54.730	148	62	4	104	250	483	626	2.20e-42	152
MS.gene28621.t1	AT2G36130	48.630	146	70	4	104	248	17	158	5.29e-38	131
MS.gene28621.t1	AT1G01940	49.655	145	68	4	104	247	8	148	1.14e-34	122
MS.gene28621.t1	AT4G32420	43.017	179	85	4	86	252	1	174	1.45e-33	129
MS.gene28621.t1	AT4G32420	43.017	179	85	4	86	252	1	174	1.45e-33	129
MS.gene28621.t1	AT4G32420	43.017	179	85	4	86	252	1	174	1.45e-33	129
MS.gene28621.t1	AT4G32420	43.017	179	85	4	86	252	1	174	1.45e-33	129
MS.gene28621.t1	AT4G32420	44.805	154	77	1	86	231	1	154	5.94e-33	127
MS.gene28621.t1	AT3G22920	41.860	172	80	7	93	253	5	167	2.23e-31	116
MS.gene28621.t1	AT5G67530	44.444	144	75	4	106	248	353	492	3.76e-29	115
MS.gene28621.t1	AT4G33060	44.056	143	73	6	106	245	22	160	1.82e-24	102
MS.gene28621.t1	AT1G53720	37.255	153	83	5	104	247	8	156	2.45e-18	83.6
MS.gene28621.t1	AT1G53720	37.255	153	83	5	104	247	8	156	6.57e-18	83.2
MS.gene28621.t1	AT2G47320	29.730	148	97	4	106	253	87	227	1.72e-12	65.5

Find 0 sgRNAs with CRISPR-Local

Find 133 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTTCAATATATATTATTGA+CGG	+	50573:20845-20864	None:intergenic	10.0%
!!	ATAAAAAAATCATTTCAGAT+AGG	+	50573:21170-21189	None:intergenic	15.0%
!!	GTTATATTTGAATATTAGAT+TGG	-	50573:22316-22335	MS.gene28621:CDS	15.0%
!!!	AAAATGTAAGTTTTTCATTT+TGG	-	50573:20631-20650	MS.gene28621:intron	15.0%
!!!	AAATGAAAAACTTACATTTT+CGG	+	50573:20631-20650	None:intergenic	15.0%
!!!	GTGTTGAAAATAATTTTTTT+AGG	+	50573:22036-22055	None:intergenic	15.0%
!!	AATAAAAAATTGACTACCAT+TGG	+	50573:22119-22138	None:intergenic	20.0%
!!	CATAGAAACAAATATAACAA+AGG	+	50573:21750-21769	None:intergenic	20.0%
!!	GATTAATGAACAAAAACAAT+TGG	+	50573:20402-20421	None:intergenic	20.0%
!!!	AAATGAGTAAATAGTCATTT+TGG	-	50573:20787-20806	MS.gene28621:CDS	20.0%
!!!	AATGTTTGTTTGTTTTTTTC+AGG	-	50573:20428-20447	MS.gene28621:CDS	20.0%
!!!	AGTTTTGAAGTAAAAATATC+AGG	+	50573:22172-22191	None:intergenic	20.0%
!!!	ATGGTTTTATTACTGTTATT+AGG	-	50573:21348-21367	MS.gene28621:intron	20.0%
!!!	ATGTTTGTTTGTTTTTTTCA+GGG	-	50573:20429-20448	MS.gene28621:CDS	20.0%
!!!	ATTTTTTATTTGCACTGTTA+AGG	-	50573:22129-22148	MS.gene28621:intron	20.0%
!!!	TAACATAGCATTTTAAAGTT+TGG	-	50573:21572-21591	MS.gene28621:intron	20.0%
!!!	TACTTACTACTGTAATTTTA+AGG	-	50573:21105-21124	MS.gene28621:intron	20.0%
!!!	TTAATTACACTGTTTTAAAC+TGG	+	50573:22010-22029	None:intergenic	20.0%
!	AAAAATCAATAATCACTGGT+TGG	-	50573:22237-22256	MS.gene28621:intron	25.0%
!	AATCAAAGAATTCATGATTC+AGG	-	50573:21657-21676	MS.gene28621:intron	25.0%
!	ATCAAAGAATTCATGATTCA+GGG	-	50573:21658-21677	MS.gene28621:intron	25.0%
!	CAAGATCAATTAGATATAGT+AGG	-	50573:20580-20599	MS.gene28621:intron	25.0%
!	CTTAGCATATACAGAAAATA+AGG	+	50573:22350-22369	None:intergenic	25.0%
!	GCTTAAAAATCAATAATCAC+TGG	-	50573:22233-22252	MS.gene28621:intron	25.0%
!	GGATGTTTATTATCTTTACA+TGG	-	50573:21329-21348	MS.gene28621:intron	25.0%
!	GTCCATAAAATTACTAACAA+AGG	-	50573:20968-20987	MS.gene28621:intron	25.0%
!	TGAATTCTTTGATTATACGA+TGG	+	50573:21651-21670	None:intergenic	25.0%
!	TGGTTGTTTATTTACATGAT+TGG	-	50573:22257-22276	MS.gene28621:intron	25.0%
!	TTGTTAATCACAAAAATCGT+TGG	-	50573:21268-21287	MS.gene28621:CDS	25.0%
!!	GTCCTTTGTTAGTAATTTTA+TGG	+	50573:20973-20992	None:intergenic	25.0%
!!!	GTTTTAAAACGAGATTGTTA+TGG	+	50573:20749-20768	None:intergenic	25.0%
!!!	TGGTTTTTAAAATTTCTCCT+TGG	-	50573:21976-21995	MS.gene28621:intron	25.0%
	AAACCTGAAAATGAGAAAGT+GGG	+	50573:20349-20368	None:intergenic	30.0%
	AAGGATGTTATGTTATGACA+TGG	-	50573:20693-20712	MS.gene28621:intron	30.0%
	AATTGACTACCATTGGTATT+AGG	+	50573:22112-22131	None:intergenic	30.0%
	ACTAACAAAGGACACATTTA+GGG	-	50573:20980-20999	MS.gene28621:intron	30.0%
	AGGATGTTATGTTATGACAT+GGG	-	50573:20694-20713	MS.gene28621:intron	30.0%
	CACATTCAAAAAAGTAATCC+AGG	+	50573:21552-21571	None:intergenic	30.0%
	CCATGTATTTGTTTCAATGA+AGG	-	50573:21796-21815	MS.gene28621:intron	30.0%
	CCTTCATTGAAACAAATACA+TGG	+	50573:21799-21818	None:intergenic	30.0%
	GTATCTTTCGTTTGTAACAT+TGG	-	50573:20879-20898	MS.gene28621:intron	30.0%
	TACTAACAAAGGACACATTT+AGG	-	50573:20979-20998	MS.gene28621:intron	30.0%
	TTAAACTGGAATTAAAGCCA+AGG	+	50573:21996-22015	None:intergenic	30.0%
	TTCTACGTCAAAGAAACATT+TGG	+	50573:21401-21420	None:intergenic	30.0%
	TTCTTTGATTATACGATGGA+AGG	+	50573:21647-21666	None:intergenic	30.0%
	TTTGGTCCTTAAATGTTTGA+GGG	-	50573:20805-20824	MS.gene28621:CDS	30.0%
!	ATCAAAGGTGCAGAAAAATA+TGG	+	50573:21523-21542	None:intergenic	30.0%
!	TTTTGGTCCTTAAATGTTTG+AGG	-	50573:20804-20823	MS.gene28621:CDS	30.0%
!!	CTAGATTTTTAGATAGTGCT+TGG	-	50573:21956-21975	MS.gene28621:intron	30.0%
!!	TAAAATCACATGTTGCTTTG+AGG	-	50573:20532-20551	MS.gene28621:intron	30.0%
!!!	ATTTTCAGGTTTGCACAAAT+GGG	-	50573:20357-20376	MS.gene28621:CDS	30.0%
	AAAGAATTCATGATTCAGGG+AGG	-	50573:21661-21680	MS.gene28621:intron	35.0%
	AAGAATTCATGATTCAGGGA+GGG	-	50573:21662-21681	MS.gene28621:intron	35.0%
	ACTGTAACCAATTTGTGACA+CGG	+	50573:20499-20518	None:intergenic	35.0%
	ACTTTAATGCCTCACACATT+TGG	-	50573:21034-21053	MS.gene28621:intron	35.0%
	ATGTGTTGTCTATGGTTCAA+AGG	-	50573:20466-20485	MS.gene28621:intron	35.0%
	CAAACCTGAAAATGAGAAAG+TGG	+	50573:20350-20369	None:intergenic	35.0%
	CACTCAAAATGTGTTTCCAT+TGG	-	50573:21835-21854	MS.gene28621:intron	35.0%
	CTGTGTTGTGATTAAGATGT+TGG	-	50573:21308-21327	MS.gene28621:intron	35.0%
	CTTTAATGCCTCACACATTT+GGG	-	50573:21035-21054	MS.gene28621:intron	35.0%
	GAGAAAGGATATGGTTACAA+AGG	-	50573:21616-21635	MS.gene28621:intron	35.0%
	GTGTTTGGACATGTTATTGA+TGG	-	50573:22472-22491	MS.gene28621:intron	35.0%
	GTTAGTACAATAATTGTCCC+TGG	-	50573:20659-20678	MS.gene28621:intron	35.0%
	TAATATTGTGCAGGAGAGAA+AGG	-	50573:21601-21620	MS.gene28621:intron	35.0%
	TAATCCAGGTACAAGATCAA+AGG	+	50573:21538-21557	None:intergenic	35.0%
	TGAAACAAATACATGGCAAG+TGG	+	50573:21792-21811	None:intergenic	35.0%
	TGGACATGTTATTGATGGAA+TGG	-	50573:22477-22496	MS.gene28621:intron	35.0%
	TGGCTTCAATAATATTGTGC+AGG	-	50573:21592-21611	MS.gene28621:intron	35.0%
	TTGGTCCTTAAATGTTTGAG+GGG	-	50573:20806-20825	MS.gene28621:CDS	35.0%
!	GAAACATTTGGTAGTCACTT+TGG	+	50573:21389-21408	None:intergenic	35.0%
!	TGAAAATGAGAAAGTGGGTT+GGG	+	50573:20344-20363	None:intergenic	35.0%
!!	ATTTTGATCCCAAATGTGTG+AGG	+	50573:21046-21065	None:intergenic	35.0%
!!!	CATTTTCAGGTTTGCACAAA+TGG	-	50573:20356-20375	MS.gene28621:CDS	35.0%
!!!	TTTTCAGGTTTGCACAAATG+GGG	-	50573:20358-20377	MS.gene28621:CDS	35.0%
	AACATGCAACAGAGACATAC+AGG	+	50573:21919-21938	None:intergenic	40.0%
	ACTACCATTGGTATTAGGAC+CGG	+	50573:22107-22126	None:intergenic	40.0%
	AGAATTCATGATTCAGGGAG+GGG	-	50573:21663-21682	MS.gene28621:intron	40.0%
	ATCCTTCAACAACATCTCCA+GGG	+	50573:20679-20698	None:intergenic	40.0%
	CATGATTGGAAAGCTCACTA+TGG	-	50573:22271-22290	MS.gene28621:CDS	40.0%
	CCTTGCAGAATCGTTAATTG+CGG	-	50573:22556-22575	MS.gene28621:CDS	40.0%
	CTGAAAATGAGAAAGTGGGT+TGG	+	50573:20345-20364	None:intergenic	40.0%
	GAACCATAGACAACACATCT+TGG	+	50573:20464-20483	None:intergenic	40.0%
	GACAACCCCTCAAACATTTA+AGG	+	50573:20814-20833	None:intergenic	40.0%
	GTTTCTTTGACGTAGAAGCT+GGG	-	50573:21404-21423	MS.gene28621:CDS	40.0%
	TAGCCAAGATGTGTTGTCTA+TGG	-	50573:20458-20477	MS.gene28621:intron	40.0%
	TCACATACCGTGTCACAAAT+TGG	-	50573:20489-20508	MS.gene28621:intron	40.0%
	TGTTTCTTTGACGTAGAAGC+TGG	-	50573:21403-21422	MS.gene28621:CDS	40.0%
	TTGATGGAATGGATGTTGTG+AGG	-	50573:22488-22507	MS.gene28621:intron	40.0%
	TTTCTTTGACGTAGAAGCTG+GGG	-	50573:21405-21424	MS.gene28621:CDS	40.0%
!	ACATGTCGATTGTCTAACCA+CGG	+	50573:22451-22470	None:intergenic	40.0%
!	ACGATTCTGCAAGGCTTTTT+AGG	+	50573:22550-22569	None:intergenic	40.0%
!	AGATTGAAGCAGTTGAGTTG+AGG	+	50573:20321-20340	None:intergenic	40.0%
!	ATCTTTGGGCAGAATCGTTT+TGG	-	50573:21432-21451	MS.gene28621:CDS	40.0%
!	ATTTTATGATGCAGACTCCG+TGG	-	50573:22431-22450	MS.gene28621:CDS	40.0%
!	CAACCCACTTTCTCATTTTC+AGG	-	50573:20343-20362	MS.gene28621:CDS	40.0%
!	CGATTCTGCAAGGCTTTTTA+GGG	+	50573:22549-22568	None:intergenic	40.0%
!	GTTTGCACAAATGGGGTTTT+GGG	-	50573:20365-20384	MS.gene28621:CDS	40.0%
!	TCTTTGGGCAGAATCGTTTT+GGG	-	50573:21433-21452	MS.gene28621:CDS	40.0%
!	TTTTCTGCCACGCAACAATT+TGG	-	50573:20555-20574	MS.gene28621:intron	40.0%
!!	AGAATCGTTTTGGGCTTGTT+TGG	-	50573:21442-21461	MS.gene28621:CDS	40.0%
	AATGCCGGTCCTAATACCAA+TGG	-	50573:22100-22119	MS.gene28621:intron	45.0%
	AATTTCCGTGCTTTGTGCAC+AGG	-	50573:21490-21509	MS.gene28621:CDS	45.0%
	ACCATAGATACTAGCTCCAC+CGG	+	50573:21871-21890	None:intergenic	45.0%
	CATCCTTCAACAACATCTCC+AGG	+	50573:20680-20699	None:intergenic	45.0%
	CCGCAATTAACGATTCTGCA+AGG	+	50573:22559-22578	None:intergenic	45.0%
	CTTCTTGCAGTGAAGCATGT+TGG	-	50573:22055-22074	MS.gene28621:intron	45.0%
	GACAATCGACATGTCGTGTT+TGG	-	50573:22457-22476	MS.gene28621:intron	45.0%
	TCTTGCTCCAAATTGTTGCG+TGG	+	50573:20565-20584	None:intergenic	45.0%
	TGCACCTTTGATCTTGTACC+TGG	-	50573:21531-21550	MS.gene28621:intron	45.0%
	TGTGCAGGAGAGAAAGGATA+TGG	-	50573:21607-21626	MS.gene28621:intron	45.0%
	TTCTTTGACGTAGAAGCTGG+GGG	-	50573:21406-21425	MS.gene28621:CDS	45.0%
	TTGAGTCTCAGGAAACAAGC+AGG	-	50573:22515-22534	MS.gene28621:intron	45.0%
	TTGGAAAGCTCACTATGGCA+TGG	-	50573:22276-22295	MS.gene28621:CDS	45.0%
	TTTGCCATGCTCAAAACTCC+AGG	+	50573:22082-22101	None:intergenic	45.0%
!	AATGTGTTTCCATTGGCTGC+AGG	-	50573:21842-21861	MS.gene28621:intron	45.0%
!	ATGTGTTTCCATTGGCTGCA+GGG	-	50573:21843-21862	MS.gene28621:intron	45.0%
!	GGTTTGCACAAATGGGGTTT+TGG	-	50573:20364-20383	MS.gene28621:CDS	45.0%
!!	GTTTTGAGCATGGCAAATGC+CGG	-	50573:22085-22104	MS.gene28621:intron	45.0%
	ACCGGTGGAGCTAGTATCTA+TGG	-	50573:21867-21886	MS.gene28621:intron	50.0%
	AGAAGCTGGGGGTGAATCTT+TGG	-	50573:21417-21436	MS.gene28621:CDS	50.0%
	GAAGCTGGGGGTGAATCTTT+GGG	-	50573:21418-21437	MS.gene28621:CDS	50.0%
	GTCCCTGGAGATGTTGTTGA+AGG	-	50573:20674-20693	MS.gene28621:intron	50.0%
	TGTGAGGACACTTGAGTCTC+AGG	-	50573:22504-22523	MS.gene28621:intron	50.0%
!!	CGTTTTGGGCTTGTTTGGAG+AGG	-	50573:21447-21466	MS.gene28621:CDS	50.0%
!!!	TGGTCCTGGAGTTTTGAGCA+TGG	-	50573:22075-22094	MS.gene28621:intron	50.0%
	CAGGGAGGGGACTTCACTAA+GGG	-	50573:21676-21695	MS.gene28621:intron	55.0%
	GCAGTGAAGCATGTTGGTCC+TGG	-	50573:22061-22080	MS.gene28621:intron	55.0%
	GCTTGCCTGTGCACAAAGCA+CGG	+	50573:21498-21517	None:intergenic	55.0%
	TCAGGGAGGGGACTTCACTA+AGG	-	50573:21675-21694	MS.gene28621:intron	55.0%
	TGCGGAGAACTGCCCATAGA+TGG	-	50573:22574-22593	MS.gene28621:CDS	55.0%
!	TTCCATTGGCTGCAGGGAAC+CGG	-	50573:21849-21868	MS.gene28621:intron	55.0%
!	CATTGGCTGCAGGGAACCGG+TGG	-	50573:21852-21871	MS.gene28621:intron	65.0%
!!	CACCGGTTCCCTGCAGCCAA+TGG	+	50573:21854-21873	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
50573	gene	20305	22600	20305	ID=MS.gene28621
50573	mRNA	20305	22600	20305	ID=MS.gene28621.t1;Parent=MS.gene28621
50573	exon	22541	22600	22541	ID=MS.gene28621.t1.exon1;Parent=MS.gene28621.t1
50573	CDS	22541	22600	22541	ID=cds.MS.gene28621.t1;Parent=MS.gene28621.t1
50573	exon	22270	22455	22270	ID=MS.gene28621.t1.exon2;Parent=MS.gene28621.t1
50573	CDS	22270	22455	22270	ID=cds.MS.gene28621.t1;Parent=MS.gene28621.t1
50573	exon	21394	21535	21394	ID=MS.gene28621.t1.exon3;Parent=MS.gene28621.t1
50573	CDS	21394	21535	21394	ID=cds.MS.gene28621.t1;Parent=MS.gene28621.t1
50573	exon	21203	21291	21203	ID=MS.gene28621.t1.exon4;Parent=MS.gene28621.t1
50573	CDS	21203	21291	21203	ID=cds.MS.gene28621.t1;Parent=MS.gene28621.t1
50573	exon	20987	21041	20987	ID=MS.gene28621.t1.exon5;Parent=MS.gene28621.t1
50573	CDS	20987	21041	20987	ID=cds.MS.gene28621.t1;Parent=MS.gene28621.t1
50573	exon	20755	20840	20755	ID=MS.gene28621.t1.exon6;Parent=MS.gene28621.t1
50573	CDS	20755	20840	20755	ID=cds.MS.gene28621.t1;Parent=MS.gene28621.t1
50573	exon	20305	20460	20305	ID=MS.gene28621.t1.exon7;Parent=MS.gene28621.t1
50573	CDS	20305	20460	20305	ID=cds.MS.gene28621.t1;Parent=MS.gene28621.t1

Gene Sequence

>MS.gene28621

ATGGCGTTTTCATCCTCAACTCAACTGCTTCAATCTCCCAACCCACTTTCTCATTTTCAGGTTTGCACAAATGGGGTTTTGGGTTTTTAATGTTCCAATTGTTTTTGTTCATTAATCATTCTAAATGTTTGTTTGTTTTTTTCAGGGTAATTTTAGCCAAGATGTGTTGTCTATGGTTCAAAGGTCACATACCGTGTCACAAATTGGTTACAGTAAATCATTGTCATTAAAATCACATGTTGCTTTGAGGTTTTCTGCCACGCAACAATTTGGAGCAAGATCAATTAGATATAGTAGGAGAATCACATGTGCAGCTGCTGCTTCCGAAAATGTAAGTTTTTCATTTTGGAATTTGTTAGTACAATAATTGTCCCTGGAGATGTTGTTGAAGGATGTTATGTTATGACATGGGCGATAATAATACTAATGTTTTATCTATTTCCATAACAATCTCGTTTTAAAACTAGTATCAAAGTGATAATAAATGAGTAAATAGTCATTTTGGTCCTTAAATGTTTGAGGGGTTGTCACGATAGTCCGTCAATAATATATATTGAAATTACATAACATATATGTATCTTTCGTTTGTAACATTGGTTCTTAAATGTGTCTTTTGTTAGTTAGTTAGTTTGATCTTTGAATGTTTTTCAGTTAGTTAATTTAGTCCATAAAATTACTAACAAAGGACACATTTAGGGATGTTTTCGTAATTTGATAAATTCGATGACTACTTTAATGCCTCACACATTTGGGATCAAAATGACTGTTTACTCGAGAATACTTATAGTCTTATACAATGTTACTTACTACTGTAATTTTAAGGAAAACAGAAAACGAGTAGAAAATGTTTTCTTAAACTAAACCTATCTGAAATGATTTTTTTATATTTAGACTGCTTGTTTGTTGTTGTTTGATTTCATTAAATGTTTGTATTGTTTACGTGTTTATAATCTAATTGACTATTTGTTAATCACAAAAATCGTTGGCATTGTTCAATAGTTGACTGTGTTGTGATTAAGATGTTGGATGTTTATTATCTTTACATGGTTTTATTACTGTTATTAGGTTCAAGAGCTGCAAGCCAAAGTGACTACCAAATGTTTCTTTGACGTAGAAGCTGGGGGTGAATCTTTGGGCAGAATCGTTTTGGGCTTGTTTGGAGAGGTTGCTCATAAAACAGTTGAAAATTTCCGTGCTTTGTGCACAGGCAAGCAACCATATTTTTCTGCACCTTTGATCTTGTACCTGGATTACTTTTTTGAATGTGTAACATAGCATTTTAAAGTTTGGCTTCAATAATATTGTGCAGGAGAGAAAGGATATGGTTACAAAGGATGCTCCTTCCATCGTATAATCAAAGAATTCATGATTCAGGGAGGGGACTTCACTAAGGGAAATGTGAGATTTGTTGCATTTGTTTGTTTGCTTGTATACGTGAATAGCCTTTGTTATATTTGTTTCTATGTTAATGTGAACATTTACTTCCACTTGCCATGTATTTGTTTCAATGAAGGTAATTATGTTTCTTCTCACTCAAAATGTGTTTCCATTGGCTGCAGGGAACCGGTGGAGCTAGTATCTATGGTTCTAGTTTCGAAGATGAGAGTTTTGCCTGTATGTCTCTGTTGCATGTTGTACAGTAGTAGTATATCTAGATTTTTAGATAGTGCTTGGTTTTTAAAATTTCTCCTTGGCTTTAATTCCAGTTTAAAACAGTGTAATTAATCTCCTAAAAAAATTATTTTCAACACTTCTTGCAGTGAAGCATGTTGGTCCTGGAGTTTTGAGCATGGCAAATGCCGGTCCTAATACCAATGGTAGTCAATTTTTTATTTGCACTGTTAAGGTGAGAGACATGTACTGTCCTGATATTTTTACTTCAAAACTTTATACGCTTTAATGACTGTAAAATTCGAATTTCTGATTAAGCTTAAAAATCAATAATCACTGGTTGGTTGTTTATTTACATGATTGGAAAGCTCACTATGGCATGGTATATATAGCTCTATCTGTTATATTTGAATATTAGATTGGAGAACATTCCTTATTTTCTGTATATGCTAAGTAACATGTTTAGTTTACTTACTAATATATTCAAATATTCTGCATATGATCTTAATGTTGTGATTTTATGATGCAGACTCCGTGGTTAGACAATCGACATGTCGTGTTTGGACATGTTATTGATGGAATGGATGTTGTGAGGACACTTGAGTCTCAGGAAACAAGCAGGTTAGATATCCCTAAAAAGCCTTGCAGAATCGTTAATTGCGGAGAACTGCCCATAGATGGTTGA

Protein sequence

>MS.gene28621.t1

MAFSSSTQLLQSPNPLSHFQGNFSQDVLSMVQRSHTVSQIGYSKSLSLKSHVALRFSATQQFGARSIRYSRRITCAAAASENVQELQAKVTTKCFFDVEAGGESLGRIVLGLFGEVAHKTVENFRALCTGEKGYGYKGCSFHRIIKEFMIQGGDFTKGNGTGGASIYGSSFEDESFALKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRTLESQETSRLDIPKKPCRIVNCGELPIDG