Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059719.t1 | RHN42994.1 | 97.8 | 279 | 6 | 0 | 1 | 279 | 8 | 286 | 5.70E-151 | 543.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059719.t1 | Q8GY88 | 67.8 | 214 | 67 | 2 | 64 | 275 | 80 | 293 | 2.7e-80 | 300.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059719.t1 | A0A396GU32 | 97.8 | 279 | 6 | 0 | 1 | 279 | 8 | 286 | 4.1e-151 | 543.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene059719 | 0.823322 | 1.47E-53 | -1.69E-46 |
| MS.gene04917 | MS.gene059719 | 0.818487 | 1.91E-52 | -1.69E-46 |
| MS.gene04991 | MS.gene059719 | -0.807336 | 5.31E-50 | -1.69E-46 |
| MS.gene050114 | MS.gene059719 | 0.810083 | 1.38E-50 | -1.69E-46 |
| MS.gene053677 | MS.gene059719 | 0.800272 | 1.56E-48 | -1.69E-46 |
| MS.gene057452 | MS.gene059719 | -0.808129 | 3.60E-50 | -1.69E-46 |
| MS.gene058278 | MS.gene059719 | 0.82081 | 5.64E-53 | -1.69E-46 |
| MS.gene058758 | MS.gene059719 | 0.803809 | 2.92E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene059719 | 0.805007 | 1.64E-49 | -1.69E-46 |
| MS.gene059719 | MS.gene060869 | 0.804221 | 2.40E-49 | -1.69E-46 |
| MS.gene059719 | MS.gene062605 | 0.810301 | 1.23E-50 | -1.69E-46 |
| MS.gene059719 | MS.gene069571 | -0.839544 | 1.49E-57 | -1.69E-46 |
| MS.gene059719 | MS.gene071699 | 0.802419 | 5.66E-49 | -1.69E-46 |
| MS.gene059719 | MS.gene072564 | 0.800468 | 1.42E-48 | -1.69E-46 |
| MS.gene059719 | MS.gene07608 | 0.811843 | 5.71E-51 | -1.69E-46 |
| MS.gene059719 | MS.gene27228 | 0.800601 | 1.34E-48 | -1.69E-46 |
| MS.gene059719 | MS.gene28621 | 0.828286 | 9.78E-55 | -1.69E-46 |
| MS.gene059719 | MS.gene37653 | 0.809006 | 2.34E-50 | -1.69E-46 |
| MS.gene059719 | MS.gene43324 | 0.81544 | 9.24E-52 | -1.69E-46 |
| MS.gene059719 | MS.gene44001 | 0.818175 | 2.25E-52 | -1.69E-46 |
| MS.gene059719 | MS.gene48054 | 0.836609 | 8.47E-57 | -1.69E-46 |
| MS.gene059719 | MS.gene49772 | 0.822673 | 2.09E-53 | -1.69E-46 |
| MS.gene059719 | MS.gene51028 | 0.803345 | 3.64E-49 | -1.69E-46 |
| MS.gene059719 | MS.gene52153 | 0.811024 | 8.61E-51 | -1.69E-46 |
| MS.gene059719 | MS.gene54353 | 0.814005 | 1.92E-51 | -1.69E-46 |
| MS.gene059719 | MS.gene54356 | 0.810155 | 1.33E-50 | -1.69E-46 |
| MS.gene059719 | MS.gene54555 | 0.802347 | 5.86E-49 | -1.69E-46 |
| MS.gene059719 | MS.gene58616 | 0.810968 | 8.85E-51 | -1.69E-46 |
| MS.gene059719 | MS.gene62943 | 0.805026 | 1.63E-49 | -1.69E-46 |
| MS.gene059719 | MS.gene63281 | 0.824853 | 6.45E-54 | -1.69E-46 |
| MS.gene059719 | MS.gene67107 | 0.824942 | 6.14E-54 | -1.69E-46 |
| MS.gene059719 | MS.gene67141 | 0.84279 | 2.09E-58 | -1.69E-46 |
| MS.gene059719 | MS.gene68171 | 0.809356 | 1.97E-50 | -1.69E-46 |
| MS.gene059719 | MS.gene70112 | 0.822102 | 2.84E-53 | -1.69E-46 |
| MS.gene059719 | MS.gene70325 | 0.928191 | 4.09E-92 | -1.69E-46 |
| MS.gene059719 | MS.gene70331 | 0.801855 | 7.40E-49 | -1.69E-46 |
| MS.gene059719 | MS.gene74900 | 0.817724 | 2.84E-52 | -1.69E-46 |
| MS.gene059719 | MS.gene76046 | 0.806664 | 7.37E-50 | -1.69E-46 |
| MS.gene059719 | MS.gene81381 | 0.810263 | 1.26E-50 | -1.69E-46 |
| MS.gene059719 | MS.gene81715 | 0.803099 | 4.10E-49 | -1.69E-46 |
| MS.gene059719 | MS.gene83305 | 0.832021 | 1.20E-55 | -1.69E-46 |
| MS.gene059719 | MS.gene83689 | 0.802236 | 6.17E-49 | -1.69E-46 |
| MS.gene059719 | MS.gene88594 | 0.804012 | 2.65E-49 | -1.69E-46 |
| MS.gene059719 | MS.gene93128 | 0.822001 | 2.99E-53 | -1.69E-46 |
| MS.gene059719 | MS.gene97411 | 0.823112 | 1.65E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059719.t1 | MTR_6g033510 | 29.915 | 234 | 159 | 2 | 33 | 266 | 49 | 277 | 6.75e-34 | 125 |
| MS.gene059719.t1 | MTR_6g033510 | 33.000 | 200 | 133 | 1 | 67 | 266 | 22 | 220 | 1.33e-33 | 122 |
| MS.gene059719.t1 | MTR_6g033510 | 33.000 | 200 | 133 | 1 | 67 | 266 | 77 | 275 | 4.52e-33 | 122 |
| MS.gene059719.t1 | MTR_6g033510 | 29.487 | 234 | 159 | 2 | 33 | 266 | 49 | 276 | 2.87e-32 | 120 |
| MS.gene059719.t1 | MTR_6g033510 | 30.144 | 209 | 141 | 2 | 33 | 241 | 49 | 252 | 5.77e-28 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059719.t1 | AT2G21940 | 60.769 | 260 | 98 | 3 | 15 | 274 | 40 | 295 | 9.18e-112 | 325 |
| MS.gene059719.t1 | AT2G21940 | 60.769 | 260 | 97 | 3 | 15 | 274 | 40 | 294 | 3.75e-111 | 323 |
| MS.gene059719.t1 | AT2G21940 | 60.769 | 260 | 97 | 3 | 15 | 274 | 40 | 294 | 3.75e-111 | 323 |
| MS.gene059719.t1 | AT2G21940 | 60.769 | 260 | 97 | 3 | 15 | 274 | 40 | 294 | 3.75e-111 | 323 |
| MS.gene059719.t1 | AT4G39540 | 56.089 | 271 | 115 | 3 | 9 | 275 | 23 | 293 | 3.03e-106 | 311 |
| MS.gene059719.t1 | AT4G39540 | 56.089 | 271 | 115 | 3 | 9 | 275 | 23 | 293 | 3.03e-106 | 311 |
| MS.gene059719.t1 | AT4G39540 | 54.122 | 279 | 116 | 4 | 9 | 275 | 23 | 301 | 1.11e-102 | 302 |
| MS.gene059719.t1 | AT2G21940 | 59.910 | 222 | 84 | 3 | 15 | 236 | 40 | 256 | 1.53e-92 | 275 |
| MS.gene059719.t1 | AT2G21940 | 59.910 | 222 | 84 | 3 | 15 | 236 | 40 | 256 | 1.53e-92 | 275 |
| MS.gene059719.t1 | AT2G21940 | 59.910 | 222 | 84 | 3 | 15 | 236 | 40 | 256 | 1.53e-92 | 275 |
| MS.gene059719.t1 | AT3G26900 | 36.181 | 199 | 117 | 3 | 68 | 266 | 75 | 263 | 1.73e-30 | 115 |
| MS.gene059719.t1 | AT3G26900 | 36.181 | 199 | 117 | 3 | 68 | 266 | 75 | 263 | 1.73e-30 | 115 |
| MS.gene059719.t1 | AT3G26900 | 36.181 | 199 | 117 | 3 | 68 | 266 | 75 | 263 | 1.73e-30 | 115 |
Find 69 sgRNAs with CRISPR-Local
Find 340 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGATATAGCAACAAAAC+TGG | 0.355991 | 4.2:+10319754 | MS.gene059719:intron |
| GCTGATATATTCAAGCTCTA+TGG | 0.360240 | 4.2:+10316874 | MS.gene059719:CDS |
| TGTTCTTATAACAATATTCC+AGG | 0.365109 | 4.2:+10314737 | MS.gene059719:CDS |
| CTGTTGTGCGGCCTATTAAT+TGG | 0.372746 | 4.2:+10318748 | MS.gene059719:CDS |
| CGTTATTCTCACACAATTCT+CGG | 0.402884 | 4.2:-10314636 | None:intergenic |
| TTGATTGAGGAAGAGGTTGA+TGG | 0.403718 | 4.2:+10316841 | MS.gene059719:CDS |
| GTAGCTTCAACATTGGAATC+TGG | 0.413868 | 4.2:+10315799 | MS.gene059719:intron |
| AAATGACAAGTTTATGCATC+AGG | 0.414811 | 4.2:-10318710 | None:intergenic |
| TTGCAGGCGCTAGAGCAAAT+TGG | 0.422109 | 4.2:+10319960 | MS.gene059719:intron |
| CATAAACTTGTCATTTCTAC+AGG | 0.428732 | 4.2:+10318717 | MS.gene059719:CDS |
| AAATTGACATGCAGGAATGA+TGG | 0.432438 | 4.2:+10316172 | MS.gene059719:intron |
| TGATACATTGATTGAGGAAG+AGG | 0.440199 | 4.2:+10316834 | MS.gene059719:CDS |
| ACCTCAATTGCAATTTCAGT+TGG | 0.443438 | 4.2:-10319803 | None:intergenic |
| GAGAATTGTGTGAGAATAAC+GGG | 0.444406 | 4.2:+10314638 | MS.gene059719:CDS |
| TACTCTTGTAGCTTCAACAT+TGG | 0.455200 | 4.2:+10315792 | MS.gene059719:intron |
| GGCTCTGGGAAGACAACTGT+GGG | 0.455572 | 4.2:+10316194 | MS.gene059719:CDS |
| TTCTCGGGTCGGGTAAGAAC+CGG | 0.470591 | 4.2:-10314620 | None:intergenic |
| TGTTCAAATGTTGCATCTAC+CGG | 0.470846 | 4.2:+10314601 | None:intergenic |
| CATGCAGGAATGATGGGCTC+TGG | 0.472739 | 4.2:+10316179 | MS.gene059719:intron |
| TCCAACTGAAATTGCAATTG+AGG | 0.477103 | 4.2:+10319802 | MS.gene059719:CDS |
| CAGATTCTGCCGTATTTAAG+TGG | 0.478853 | 4.2:+10316050 | MS.gene059719:CDS |
| TCTCACACAATTCTCGGGTC+GGG | 0.489860 | 4.2:-10314630 | None:intergenic |
| CGAGAATTGTGTGAGAATAA+CGG | 0.490051 | 4.2:+10314637 | MS.gene059719:CDS |
| GTTTCCCCTTGAGGAAGAGT+TGG | 0.510532 | 4.2:+10315831 | MS.gene059719:CDS |
| TTCTAATGAGACTCTAGCAT+TGG | 0.514662 | 4.2:-10319381 | None:intergenic |
| TTATAGTGATACATTGATTG+AGG | 0.517101 | 4.2:+10316828 | MS.gene059719:intron |
| TTCTCACACAATTCTCGGGT+CGG | 0.518453 | 4.2:-10314631 | None:intergenic |
| AATTGACATGCAGGAATGAT+GGG | 0.520917 | 4.2:+10316173 | MS.gene059719:intron |
| CTGTTGGCCAATGCTTCCAC+TGG | 0.535850 | 4.2:-10318917 | None:intergenic |
| AGATGTACCAGTGGAAGCAT+TGG | 0.540460 | 4.2:+10318910 | MS.gene059719:CDS |
| CTTGTCATTTCTACAGGTGG+AGG | 0.541169 | 4.2:+10318723 | MS.gene059719:CDS |
| AGAATCTTTCTTTCGCGAGA+AGG | 0.544258 | 4.2:+10316897 | MS.gene059719:CDS |
| TAACGGGTTGTTCTTTGAGT+CGG | 0.545142 | 4.2:+10314654 | MS.gene059719:CDS |
| TGAGGAAGAGTTGGTTCTGA+AGG | 0.546791 | 4.2:+10315840 | MS.gene059719:CDS |
| GGTTGTTCTTTGAGTCGGAC+CGG | 0.550470 | 4.2:+10314659 | MS.gene059719:CDS |
| GTTATTCTCACACAATTCTC+GGG | 0.550567 | 4.2:-10314635 | None:intergenic |
| GGGCGCTGTATATATGTTGT+TGG | 0.552480 | 4.2:+10316071 | MS.gene059719:CDS |
| CCTCTTCTACACGATGAAGC+AGG | 0.557589 | 4.2:+10318968 | MS.gene059719:CDS |
| TCCCACGGCTGCAATTCTGT+TGG | 0.558533 | 4.2:-10318933 | None:intergenic |
| TCGGTGCAAGAAGGTTTCTA+CGG | 0.564921 | 4.2:+10314706 | MS.gene059719:CDS |
| ATCTTTCTTTCGCGAGAAGG+AGG | 0.565809 | 4.2:+10316900 | MS.gene059719:CDS |
| ATACAGCGCCCACTTAAATA+CGG | 0.566584 | 4.2:-10316059 | None:intergenic |
| AAACTTGTCATTTCTACAGG+TGG | 0.573379 | 4.2:+10318720 | MS.gene059719:CDS |
| GGCCAACAGAATTGCAGCCG+TGG | 0.577317 | 4.2:+10318931 | MS.gene059719:CDS |
| CTGCTTCATCGTGTAGAAGA+GGG | 0.582100 | 4.2:-10318967 | None:intergenic |
| TCAGAACCAACTCTTCCTCA+AGG | 0.583804 | 4.2:-10315837 | None:intergenic |
| CAGAACCAACTCTTCCTCAA+GGG | 0.586131 | 4.2:-10315836 | None:intergenic |
| ATGCAGGAATGATGGGCTCT+GGG | 0.586330 | 4.2:+10316180 | MS.gene059719:intron |
| CCTGCTTCATCGTGTAGAAG+AGG | 0.594223 | 4.2:-10318968 | None:intergenic |
| GCAGATATAGCAACAAAACT+GGG | 0.598728 | 4.2:+10319755 | MS.gene059719:intron |
| AGATTCTGCCGTATTTAAGT+GGG | 0.599085 | 4.2:+10316051 | MS.gene059719:CDS |
| CCAGGAAATATATGCACAAG+GGG | 0.600293 | 4.2:+10318873 | MS.gene059719:intron |
| AATGACAAGTTTATGCATCA+GGG | 0.602843 | 4.2:-10318709 | None:intergenic |
| AGGGCATAAGTTTCCCCTTG+AGG | 0.610167 | 4.2:+10315822 | MS.gene059719:CDS |
| TGAGACTCTAGCATTGGCGT+TGG | 0.610419 | 4.2:-10319375 | None:intergenic |
| GCTTCAACATTGGAATCTGG+AGG | 0.615047 | 4.2:+10315802 | MS.gene059719:intron |
| GGGCTCTGGGAAGACAACTG+TGG | 0.617107 | 4.2:+10316193 | MS.gene059719:CDS |
| GCCAACAGAATTGCAGCCGT+GGG | 0.617442 | 4.2:+10318932 | MS.gene059719:CDS |
| AGGGCGAGAATTAGTTCCCA+CGG | 0.618683 | 4.2:-10318948 | None:intergenic |
| AGAACCAACTCTTCCTCAAG+GGG | 0.619441 | 4.2:-10315835 | None:intergenic |
| TCAGACGATTCGGTGCAAGA+AGG | 0.619552 | 4.2:+10314697 | MS.gene059719:CDS |
| TGCCAGGAAATATATGCACA+AGG | 0.620476 | 4.2:+10318871 | MS.gene059719:intron |
| GCCAGGAAATATATGCACAA+GGG | 0.635533 | 4.2:+10318872 | MS.gene059719:intron |
| TGTTTGGTTAGATGTACCAG+TGG | 0.652145 | 4.2:+10318901 | MS.gene059719:CDS |
| CTTCAACATTGGAATCTGGA+GGG | 0.659832 | 4.2:+10315803 | MS.gene059719:CDS |
| CAGGTGGAGGTGCTGTTGTG+CGG | 0.664050 | 4.2:+10318736 | MS.gene059719:CDS |
| CAGGAAATATATGCACAAGG+GGG | 0.768658 | 4.2:+10318874 | MS.gene059719:intron |
| AGCAGGAGATGCATACACTG+CGG | 0.783701 | 4.2:+10318985 | MS.gene059719:CDS |
| GCTCTGGGAAGACAACTGTG+GGG | 0.798287 | 4.2:+10316195 | MS.gene059719:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATGGATAATTAATATA+AGG | - | chr4.2:10319237-10319256 | None:intergenic | 10.0% |
| !! | ATTATGGATAATTAATATAA+GGG | - | chr4.2:10319236-10319255 | None:intergenic | 10.0% |
| !!! | AAGAAAATATTTTGTTTATT+TGG | - | chr4.2:10317369-10317388 | None:intergenic | 10.0% |
| !!! | ATATTAATTATCCATAATTT+TGG | + | chr4.2:10319238-10319257 | MS.gene059719:intron | 10.0% |
| !!! | ATTTTATATTTTTTGATTCA+TGG | + | chr4.2:10316758-10316777 | MS.gene059719:intron | 10.0% |
| !!! | TAATTTTTATACCAATTAAT+AGG | - | chr4.2:10318762-10318781 | None:intergenic | 10.0% |
| !!! | TTATTTTTAATCTCTATAAT+TGG | + | chr4.2:10318155-10318174 | MS.gene059719:intron | 10.0% |
| !! | ATGGTATATATATACTTAAA+AGG | - | chr4.2:10315990-10316009 | None:intergenic | 15.0% |
| !! | ATTCAAGTGATATTAAATTA+AGG | + | chr4.2:10316560-10316579 | MS.gene059719:intron | 15.0% |
| !! | TACATTTAATATTTGATATG+AGG | + | chr4.2:10316521-10316540 | MS.gene059719:intron | 15.0% |
| !! | TAGTACAAAATTTATCAAAT+AGG | + | chr4.2:10318032-10318051 | MS.gene059719:intron | 15.0% |
| !! | TATTATGCAATAGATAAAAA+CGG | + | chr4.2:10316595-10316614 | MS.gene059719:intron | 15.0% |
| !! | TGGTATATATATACTTAAAA+GGG | - | chr4.2:10315989-10316008 | None:intergenic | 15.0% |
| !!! | AAAGGTTTTAAGAAATAATT+AGG | + | chr4.2:10317914-10317933 | MS.gene059719:intron | 15.0% |
| !!! | AAGTAAGTTTTTATGAAATT+CGG | - | chr4.2:10319169-10319188 | None:intergenic | 15.0% |
| !!! | AATTATGTAGCATTTTTTTT+TGG | + | chr4.2:10316434-10316453 | MS.gene059719:intron | 15.0% |
| !!! | TCATAAAAACTTACTTTTAA+AGG | + | chr4.2:10319173-10319192 | MS.gene059719:intron | 15.0% |
| !! | AAATAACATTCAACAGAATT+TGG | - | chr4.2:10315002-10315021 | None:intergenic | 20.0% |
| !! | AATATCAGAAACAAAATGTA+AGG | - | chr4.2:10315773-10315792 | None:intergenic | 20.0% |
| !! | ATATATAGAAGCAGAAAATA+AGG | - | chr4.2:10317034-10317053 | None:intergenic | 20.0% |
| !! | ATCTTTACATGTATTTGTAT+GGG | + | chr4.2:10318841-10318860 | MS.gene059719:intron | 20.0% |
| !! | ATGTTTATTTCAAACAAAGT+TGG | - | chr4.2:10317853-10317872 | None:intergenic | 20.0% |
| !! | ATTATGCAATAGATAAAAAC+GGG | + | chr4.2:10316596-10316615 | MS.gene059719:intron | 20.0% |
| !! | ATTGATTGATTGTACATATA+TGG | + | chr4.2:10317568-10317587 | MS.gene059719:intron | 20.0% |
| !! | CGATTATATCAAATTAATAC+CGG | - | chr4.2:10317111-10317130 | None:intergenic | 20.0% |
| !! | GACAAAGCATATTATATTAA+GGG | + | chr4.2:10319042-10319061 | MS.gene059719:intron | 20.0% |
| !! | TAATAGTCAAACAGAATAAT+AGG | - | chr4.2:10318583-10318602 | None:intergenic | 20.0% |
| !! | TATATAGAAGCAGAAAATAA+GGG | - | chr4.2:10317033-10317052 | None:intergenic | 20.0% |
| !! | TGACAAAGCATATTATATTA+AGG | + | chr4.2:10319041-10319060 | MS.gene059719:intron | 20.0% |
| !! | TGTTTATTTCAAACAAAGTT+GGG | - | chr4.2:10317852-10317871 | None:intergenic | 20.0% |
| !! | TTATTTAATATGCTCATACT+TGG | + | chr4.2:10315704-10315723 | MS.gene059719:intron | 20.0% |
| !!! | AATATTTTTTTACGCAAGTT+TGG | - | chr4.2:10319267-10319286 | None:intergenic | 20.0% |
| !!! | TATTTTGATTGTTATCATCT+AGG | - | chr4.2:10319706-10319725 | None:intergenic | 20.0% |
| !!! | TTTTAATCTCTATAATCGTT+TGG | - | chr4.2:10318333-10318352 | None:intergenic | 20.0% |
| !!! | TTTTTACTAAAGTGGTTTTA+AGG | + | chr4.2:10318215-10318234 | MS.gene059719:intron | 20.0% |
| ! | AAAATGTAAGGATCCAAAAT+GGG | - | chr4.2:10315761-10315780 | None:intergenic | 25.0% |
| ! | AAGAATTATTAGATTCGCAT+CGG | - | chr4.2:10319933-10319952 | None:intergenic | 25.0% |
| ! | ACAAATTGAAATGGAGTTAA+AGG | - | chr4.2:10319851-10319870 | None:intergenic | 25.0% |
| ! | ACTACACTTTCAAAAACAAA+AGG | - | chr4.2:10314851-10314870 | None:intergenic | 25.0% |
| ! | AGTTATCTTAAAGAGCTTAT+TGG | - | chr4.2:10315306-10315325 | None:intergenic | 25.0% |
| ! | ATAACGTGATTAATATGCAA+AGG | + | chr4.2:10315030-10315049 | MS.gene059719:intron | 25.0% |
| ! | ATAGTTTACATTTATAGTCG+AGG | + | chr4.2:10317768-10317787 | MS.gene059719:intron | 25.0% |
| ! | ATCAAATGTACCATTTGAAT+AGG | + | chr4.2:10316354-10316373 | MS.gene059719:intron | 25.0% |
| ! | CAATACAAGTATGATTACTT+TGG | + | chr4.2:10316133-10316152 | MS.gene059719:intron | 25.0% |
| ! | CATCTTTACATGTATTTGTA+TGG | + | chr4.2:10318840-10318859 | MS.gene059719:intron | 25.0% |
| ! | CTACACTTTCAAAAACAAAA+GGG | - | chr4.2:10314850-10314869 | None:intergenic | 25.0% |
| ! | GTGATAGAAAATATATTCTC+AGG | - | chr4.2:10315540-10315559 | None:intergenic | 25.0% |
| ! | GTTTATTTCAAACAAAGTTG+GGG | - | chr4.2:10317851-10317870 | None:intergenic | 25.0% |
| ! | TAACGTGATTAATATGCAAA+GGG | + | chr4.2:10315031-10315050 | MS.gene059719:intron | 25.0% |
| ! | TAAGATATTGTGAATTGTTC+CGG | + | chr4.2:10318609-10318628 | MS.gene059719:intron | 25.0% |
| ! | TACAAATACATGTAAAGATG+AGG | - | chr4.2:10318840-10318859 | None:intergenic | 25.0% |
| ! | TGGGATGTAATTAAAGAAAT+AGG | - | chr4.2:10317007-10317026 | None:intergenic | 25.0% |
| ! | TGTACAATCAATCAATATAG+AGG | - | chr4.2:10317564-10317583 | None:intergenic | 25.0% |
| ! | TGTTCTTATAACAATATTCC+AGG | + | chr4.2:10314737-10314756 | MS.gene059719:CDS | 25.0% |
| ! | TTAAAGAGCTTATTGGATTA+AGG | - | chr4.2:10315299-10315318 | None:intergenic | 25.0% |
| ! | TTATGCAATAGATAAAAACG+GGG | + | chr4.2:10316597-10316616 | MS.gene059719:intron | 25.0% |
| ! | TTCTTTATTGCCTATTCAAA+TGG | - | chr4.2:10316367-10316386 | None:intergenic | 25.0% |
| ! | TTGCATATTAATCACGTTAT+AGG | - | chr4.2:10315030-10315049 | None:intergenic | 25.0% |
| ! | TTGTTAAATAACAGCTATAG+CGG | + | chr4.2:10317975-10317994 | MS.gene059719:intron | 25.0% |
| ! | TTTATTTCAAACAAAGTTGG+GGG | - | chr4.2:10317850-10317869 | None:intergenic | 25.0% |
| !! | AAAACAGTTACTTTGATTCA+TGG | + | chr4.2:10316715-10316734 | MS.gene059719:intron | 25.0% |
| !! | ATGTCTTTTTATCTTTTAGC+AGG | - | chr4.2:10318136-10318155 | None:intergenic | 25.0% |
| !! | GATCTATTCTGCAATTTTAT+TGG | - | chr4.2:10316026-10316045 | None:intergenic | 25.0% |
| !! | GATGACAATTTTTACTAAAG+TGG | + | chr4.2:10318207-10318226 | MS.gene059719:intron | 25.0% |
| !! | TGTCTTTTTATCTTTTAGCA+GGG | - | chr4.2:10318135-10318154 | None:intergenic | 25.0% |
| !! | TTAGCTATTCATTTTGTGAT+TGG | + | chr4.2:10316237-10316256 | MS.gene059719:CDS | 25.0% |
| !! | TTATAGTGATACATTGATTG+AGG | + | chr4.2:10316828-10316847 | MS.gene059719:intron | 25.0% |
| !! | TTGTAACAAGCTTTTATTGT+AGG | - | chr4.2:10318473-10318492 | None:intergenic | 25.0% |
| !!! | AAGCTCTTTAAGATAACTTT+TGG | + | chr4.2:10315308-10315327 | MS.gene059719:intron | 25.0% |
| !!! | ACAAGATCACTCTTTTTTAT+TGG | - | chr4.2:10319627-10319646 | None:intergenic | 25.0% |
| !!! | ACTGATTTGAACCATATTAA+TGG | - | chr4.2:10318248-10318267 | None:intergenic | 25.0% |
| !!! | CATTTCAATTTGTTAGCTTT+GGG | + | chr4.2:10319858-10319877 | MS.gene059719:intron | 25.0% |
| !!! | TACAATAAAAGCTTGTTACA+AGG | + | chr4.2:10318472-10318491 | MS.gene059719:intron | 25.0% |
| !!! | TATTGGTTCAAGTAAGAAAA+TGG | - | chr4.2:10316009-10316028 | None:intergenic | 25.0% |
| !!! | TCTTAAAACCTTTTTAAGAG+AGG | - | chr4.2:10317907-10317926 | None:intergenic | 25.0% |
| !!! | TGATGGTTTTGCTTAAAAAA+TGG | - | chr4.2:10315935-10315954 | None:intergenic | 25.0% |
| !!! | TTTTGTCATTATTTAAAGCG+AGG | + | chr4.2:10314873-10314892 | MS.gene059719:intron | 25.0% |
| AAATGACAAGTTTATGCATC+AGG | - | chr4.2:10318713-10318732 | None:intergenic | 30.0% | |
| AACAAAAGATCCGTAAATGT+GGG | - | chr4.2:10317448-10317467 | None:intergenic | 30.0% | |
| AACATTCAACAGAATTTGGA+AGG | - | chr4.2:10314998-10315017 | None:intergenic | 30.0% | |
| AATCAGCAAGACCTATAATA+TGG | - | chr4.2:10316784-10316803 | None:intergenic | 30.0% | |
| AATCAGCAAGACTTGTAATA+TGG | - | chr4.2:10316741-10316760 | None:intergenic | 30.0% | |
| AATGACAAGTTTATGCATCA+GGG | - | chr4.2:10318712-10318731 | None:intergenic | 30.0% | |
| AATTTCTTGTCTTTGTTCAC+AGG | + | chr4.2:10316272-10316291 | MS.gene059719:intron | 30.0% | |
| ACTTGAATATGAACACTAGT+TGG | - | chr4.2:10316548-10316567 | None:intergenic | 30.0% | |
| AGAAATAATTAGGTGCTTAC+TGG | + | chr4.2:10317924-10317943 | MS.gene059719:intron | 30.0% | |
| ATAATTCTTCTGTATCTTGC+AGG | + | chr4.2:10319944-10319963 | MS.gene059719:intron | 30.0% | |
| ATACTTTCAAATTGACATGC+AGG | + | chr4.2:10316164-10316183 | MS.gene059719:intron | 30.0% | |
| ATATATTATAAGCTGCTCCA+AGG | + | chr4.2:10317048-10317067 | MS.gene059719:intron | 30.0% | |
| ATTTCTTGTCTTTGTTCACA+GGG | + | chr4.2:10316273-10316292 | MS.gene059719:intron | 30.0% | |
| CAAAATGTAAGGATCCAAAA+TGG | - | chr4.2:10315762-10315781 | None:intergenic | 30.0% | |
| CAAACAGAATAATAGGAGTT+AGG | - | chr4.2:10318576-10318595 | None:intergenic | 30.0% | |
| CAGATTCTGTAAGAAAAAAC+AGG | + | chr4.2:10319456-10319475 | MS.gene059719:intron | 30.0% | |
| CAGTTAATATGCTTCAATTC+AGG | - | chr4.2:10318394-10318413 | None:intergenic | 30.0% | |
| CCAAAGCTAACAAATTGAAA+TGG | - | chr4.2:10319860-10319879 | None:intergenic | 30.0% | |
| CGACAATGTAAATACATACA+AGG | - | chr4.2:10319488-10319507 | None:intergenic | 30.0% | |
| CTCTCATATTGTTAAAGTAG+AGG | - | chr4.2:10317639-10317658 | None:intergenic | 30.0% | |
| CTGATATTACTATCTGTTGA+TGG | - | chr4.2:10315952-10315971 | None:intergenic | 30.0% | |
| CTGTGAACAGTGTAATTAAT+TGG | - | chr4.2:10314799-10314818 | None:intergenic | 30.0% | |
| GAATATTTCTTCAACCAGTT+AGG | + | chr4.2:10317477-10317496 | MS.gene059719:intron | 30.0% | |
| GATTGATTGTACATATATGG+TGG | + | chr4.2:10317571-10317590 | MS.gene059719:intron | 30.0% | |
| GTAATCATACTTGTATTGCA+TGG | - | chr4.2:10316131-10316150 | None:intergenic | 30.0% | |
| TAAGCAAATTTGTAGATGCT+AGG | + | chr4.2:10314915-10314934 | MS.gene059719:intron | 30.0% | |
| TACATGTATTTGTATGGGAA+TGG | + | chr4.2:10318846-10318865 | MS.gene059719:intron | 30.0% | |
| TATGCAATAGATAAAAACGG+GGG | + | chr4.2:10316598-10316617 | MS.gene059719:intron | 30.0% | |
| TGACATCAACACTAATTAGA+AGG | - | chr4.2:10315223-10315242 | None:intergenic | 30.0% | |
| TGTATGTATTTACATTGTCG+TGG | + | chr4.2:10319488-10319507 | MS.gene059719:intron | 30.0% | |
| TGTTTAATTATAGCAGAACC+TGG | - | chr4.2:10314758-10314777 | None:intergenic | 30.0% | |
| TTAATTACACTGTTCACAGT+TGG | + | chr4.2:10314800-10314819 | MS.gene059719:intron | 30.0% | |
| TTCTACATACCAATTCATGA+TGG | + | chr4.2:10317284-10317303 | MS.gene059719:intron | 30.0% | |
| TTGAATATAATCGCATGTGT+CGG | - | chr4.2:10315183-10315202 | None:intergenic | 30.0% | |
| TTGATTCATGGCCATATTAT+AGG | + | chr4.2:10316770-10316789 | MS.gene059719:intron | 30.0% | |
| ! | AAAATAAGTGCTTCCCATTT+TGG | + | chr4.2:10315745-10315764 | MS.gene059719:intron | 30.0% |
| ! | AAGTTTGGTGACCAAAATTA+TGG | - | chr4.2:10319252-10319271 | None:intergenic | 30.0% |
| ! | ACACTTTTCCTTGAAATATG+CGG | - | chr4.2:10315669-10315688 | None:intergenic | 30.0% |
| ! | ACTAATTGATTCAGAACACT+AGG | - | chr4.2:10319541-10319560 | None:intergenic | 30.0% |
| ! | CAAAGTAACTGTTTTGCAAT+AGG | - | chr4.2:10316710-10316729 | None:intergenic | 30.0% |
| ! | CATAAACTTGTCATTTCTAC+AGG | + | chr4.2:10318717-10318736 | MS.gene059719:CDS | 30.0% |
| ! | CATTTGCTTTCTTGTTATGT+TGG | + | chr4.2:10317799-10317818 | MS.gene059719:intron | 30.0% |
| ! | GCTACACAATTTACATGTTT+TGG | - | chr4.2:10316311-10316330 | None:intergenic | 30.0% |
| ! | GGTTTTGCTTAAAAAATGGA+AGG | - | chr4.2:10315931-10315950 | None:intergenic | 30.0% |
| ! | TTATCAAATAGGTGCTATAG+TGG | + | chr4.2:10318043-10318062 | MS.gene059719:intron | 30.0% |
| !! | AAGCAGAAAATAAGGGTATT+GGG | - | chr4.2:10317026-10317045 | None:intergenic | 30.0% |
| !! | AAGGTACTGAACCATTAATA+TGG | + | chr4.2:10318234-10318253 | MS.gene059719:intron | 30.0% |
| !! | ACTCTATGATTTTGATCTCA+TGG | - | chr4.2:10314946-10314965 | None:intergenic | 30.0% |
| !! | CCATTTCAATTTGTTAGCTT+TGG | + | chr4.2:10319857-10319876 | MS.gene059719:intron | 30.0% |
| !! | TAAAACCTTTTTAAGAGAGG+AGG | - | chr4.2:10317904-10317923 | None:intergenic | 30.0% |
| !!! | AAAGCGAGGTTTTGTTTTTT+TGG | + | chr4.2:10314887-10314906 | MS.gene059719:intron | 30.0% |
| !!! | CTGTTTTTTCTTACAGAATC+TGG | - | chr4.2:10319458-10319477 | None:intergenic | 30.0% |
| !!! | TCACTCTTTTTTATTGGAGA+AGG | - | chr4.2:10319621-10319640 | None:intergenic | 30.0% |
| AAATTGACATGCAGGAATGA+TGG | + | chr4.2:10316172-10316191 | MS.gene059719:intron | 35.0% | |
| AACAGCATAATGTCTGATGA+TGG | + | chr4.2:10318522-10318541 | MS.gene059719:intron | 35.0% | |
| AACATGTTGAGTCACTTGAT+AGG | - | chr4.2:10318302-10318321 | None:intergenic | 35.0% | |
| AATGCTATTCAAGCATCCAA+TGG | - | chr4.2:10315606-10315625 | None:intergenic | 35.0% | |
| AATTGACATGCAGGAATGAT+GGG | + | chr4.2:10316173-10316192 | MS.gene059719:intron | 35.0% | |
| ACATGTTGAGTCACTTGATA+GGG | - | chr4.2:10318301-10318320 | None:intergenic | 35.0% | |
| ACCTCAATTGCAATTTCAGT+TGG | - | chr4.2:10319806-10319825 | None:intergenic | 35.0% | |
| AGATTCTGCCGTATTTAAGT+GGG | + | chr4.2:10316051-10316070 | MS.gene059719:CDS | 35.0% | |
| AGTTTGTAGAGACAGCAAAT+GGG | + | chr4.2:10317522-10317541 | MS.gene059719:intron | 35.0% | |
| ATCATACTTGTATTGCATGG+CGG | - | chr4.2:10316128-10316147 | None:intergenic | 35.0% | |
| ATGCAATAGATAAAAACGGG+GGG | + | chr4.2:10316599-10316618 | MS.gene059719:intron | 35.0% | |
| ATGTTGTTGGTCAGTTTCTT+TGG | + | chr4.2:10316084-10316103 | MS.gene059719:intron | 35.0% | |
| CAAATCCTCCTCTCTTAAAA+AGG | + | chr4.2:10317896-10317915 | MS.gene059719:intron | 35.0% | |
| CAACAAAAGATCCGTAAATG+TGG | - | chr4.2:10317449-10317468 | None:intergenic | 35.0% | |
| CGAGAATTGTGTGAGAATAA+CGG | + | chr4.2:10314637-10314656 | MS.gene059719:CDS | 35.0% | |
| CGTTATTCTCACACAATTCT+CGG | - | chr4.2:10314639-10314658 | None:intergenic | 35.0% | |
| GAGAATTGTGTGAGAATAAC+GGG | + | chr4.2:10314638-10314657 | MS.gene059719:CDS | 35.0% | |
| GCAGATATAGCAACAAAACT+GGG | + | chr4.2:10319755-10319774 | MS.gene059719:intron | 35.0% | |
| GCATATTTCAAGGAAAAGTG+TGG | + | chr4.2:10315668-10315687 | MS.gene059719:intron | 35.0% | |
| GCCAAATGTACCATTTGAAT+AGG | + | chr4.2:10316456-10316475 | MS.gene059719:intron | 35.0% | |
| GCCTATTCAAATGGTACATT+TGG | - | chr4.2:10316358-10316377 | None:intergenic | 35.0% | |
| GCTGAAATACCAATTCATGT+TGG | + | chr4.2:10317238-10317257 | MS.gene059719:intron | 35.0% | |
| GCTGATATATTCAAGCTCTA+TGG | + | chr4.2:10316874-10316893 | MS.gene059719:CDS | 35.0% | |
| GCTTGAATAGCATTTACTTC+TGG | + | chr4.2:10315612-10315631 | MS.gene059719:intron | 35.0% | |
| GGAATTTACCGCATATTTCA+AGG | + | chr4.2:10315658-10315677 | MS.gene059719:intron | 35.0% | |
| GTGATTAATATGCAAAGGGA+GGG | + | chr4.2:10315035-10315054 | MS.gene059719:intron | 35.0% | |
| GTTATTCTCACACAATTCTC+GGG | - | chr4.2:10314638-10314657 | None:intergenic | 35.0% | |
| TACTCTTGTAGCTTCAACAT+TGG | + | chr4.2:10315792-10315811 | MS.gene059719:intron | 35.0% | |
| TCCAACTGAAATTGCAATTG+AGG | + | chr4.2:10319802-10319821 | MS.gene059719:CDS | 35.0% | |
| TGAAAAAGCTTCAGACGATT+CGG | + | chr4.2:10314687-10314706 | MS.gene059719:CDS | 35.0% | |
| TGCAGATATAGCAACAAAAC+TGG | + | chr4.2:10319754-10319773 | MS.gene059719:intron | 35.0% | |
| TGGTACTCTACAATTAACAG+TGG | + | chr4.2:10317258-10317277 | MS.gene059719:intron | 35.0% | |
| TGTCAAGTACCATCATGAAT+TGG | - | chr4.2:10317296-10317315 | None:intergenic | 35.0% | |
| TTACATTTATAGTCGAGGTC+TGG | + | chr4.2:10317773-10317792 | MS.gene059719:intron | 35.0% | |
| TTACTTGCAGAAATCCTAAC+TGG | - | chr4.2:10317494-10317513 | None:intergenic | 35.0% | |
| TTCATATGATCGTATCAGCT+GGG | + | chr4.2:10317737-10317756 | MS.gene059719:intron | 35.0% | |
| TTCTAATGAGACTCTAGCAT+TGG | - | chr4.2:10319384-10319403 | None:intergenic | 35.0% | |
| TTGTTTACCATTTCAGACTG+AGG | + | chr4.2:10318671-10318690 | MS.gene059719:intron | 35.0% | |
| TTTCATATGATCGTATCAGC+TGG | + | chr4.2:10317736-10317755 | MS.gene059719:intron | 35.0% | |
| ! | AAACTTGTCATTTCTACAGG+TGG | + | chr4.2:10318720-10318739 | MS.gene059719:CDS | 35.0% |
| ! | AAAGCAACATGTCTTTTAGC+AGG | + | chr4.2:10318350-10318369 | MS.gene059719:intron | 35.0% |
| ! | AAGCAACATGTCTTTTAGCA+GGG | + | chr4.2:10318351-10318370 | MS.gene059719:intron | 35.0% |
| ! | ACAAATCAGACGCATCTTTT+CGG | - | chr4.2:10319781-10319800 | None:intergenic | 35.0% |
| ! | ATTAAGCCAGCTTTTACCAT+TGG | + | chr4.2:10315587-10315606 | MS.gene059719:intron | 35.0% |
| ! | CTAGGAAGCATATAACATGA+AGG | - | chr4.2:10319688-10319707 | None:intergenic | 35.0% |
| ! | GAAGCAGAAAATAAGGGTAT+TGG | - | chr4.2:10317027-10317046 | None:intergenic | 35.0% |
| ! | GCAAATTGGCAACTTTTTGA+AGG | + | chr4.2:10319974-10319993 | MS.gene059719:CDS | 35.0% |
| ! | GGTAAAAGCTGGCTTAATAT+TGG | - | chr4.2:10315585-10315604 | None:intergenic | 35.0% |
| ! | TAGTTTGTAGAGACAGCAAA+TGG | + | chr4.2:10317521-10317540 | MS.gene059719:intron | 35.0% |
| ! | TGATACATTGATTGAGGAAG+AGG | + | chr4.2:10316834-10316853 | MS.gene059719:CDS | 35.0% |
| ! | TGTAGAGTACCAACATGAAT+TGG | - | chr4.2:10317250-10317269 | None:intergenic | 35.0% |
| !! | AACTTTTTGAAGGCAGAAGA+TGG | + | chr4.2:10319984-10320003 | MS.gene059719:CDS | 35.0% |
| !! | AAGAGAGGAGGATTTGTTTT+AGG | - | chr4.2:10317892-10317911 | None:intergenic | 35.0% |
| !! | ATTCGGTGTAATCAATGCAT+TGG | - | chr4.2:10319152-10319171 | None:intergenic | 35.0% |
| !! | TCTGATCTTTTTGAAGAGAG+AGG | + | chr4.2:10319341-10319360 | MS.gene059719:CDS | 35.0% |
| !!! | AGAGAGGAGGATTTGTTTTA+GGG | - | chr4.2:10317891-10317910 | None:intergenic | 35.0% |
| !!! | CTGAAGCTTTTTCAGTTTAC+CGG | - | chr4.2:10314681-10314700 | None:intergenic | 35.0% |
| !!! | GTTATGTTGGCTTCTAGTTT+TGG | + | chr4.2:10317812-10317831 | MS.gene059719:intron | 35.0% |
| !!! | TGGGAAGCACTTATTTTAGT+AGG | - | chr4.2:10315742-10315761 | None:intergenic | 35.0% |
| AAAACTAGAGCAAAATCCCC+AGG | - | chr4.2:10316639-10316658 | None:intergenic | 40.0% | |
| AAAGATCCGTAAATGTGGGA+CGG | - | chr4.2:10317444-10317463 | None:intergenic | 40.0% | |
| AAGCATCCAATGGTAAAAGC+TGG | - | chr4.2:10315596-10315615 | None:intergenic | 40.0% | |
| AATAGATAAAAACGGGGGGA+GGG | + | chr4.2:10316603-10316622 | MS.gene059719:intron | 40.0% | |
| ACCAGTTGTAATTCACATGC+AGG | + | chr4.2:10319304-10319323 | MS.gene059719:intron | 40.0% | |
| AGAATCTTTCTTTCGCGAGA+AGG | + | chr4.2:10316897-10316916 | MS.gene059719:CDS | 40.0% | |
| ATACAGCGCCCACTTAAATA+CGG | - | chr4.2:10316062-10316081 | None:intergenic | 40.0% | |
| ATCCAATCACAAGTAGCTCA+TGG | + | chr4.2:10315410-10315429 | MS.gene059719:intron | 40.0% | |
| CAAACCTGTAAAGTTGGACA+GGG | - | chr4.2:10317701-10317720 | None:intergenic | 40.0% | |
| CAATAGAACGTAACAGTGGA+TGG | - | chr4.2:10315340-10315359 | None:intergenic | 40.0% | |
| CAGATTCTGCCGTATTTAAG+TGG | + | chr4.2:10316050-10316069 | MS.gene059719:CDS | 40.0% | |
| CAGGAAATATATGCACAAGG+GGG | + | chr4.2:10318874-10318893 | MS.gene059719:intron | 40.0% | |
| CATGTTGAGTCACTTGATAG+GGG | - | chr4.2:10318300-10318319 | None:intergenic | 40.0% | |
| CCAGGAAATATATGCACAAG+GGG | + | chr4.2:10318873-10318892 | MS.gene059719:intron | 40.0% | |
| CGTGATTAATATGCAAAGGG+AGG | + | chr4.2:10315034-10315053 | MS.gene059719:intron | 40.0% | |
| CTAGTAACAAGCTGGTAAGA+GGG | - | chr4.2:10317605-10317624 | None:intergenic | 40.0% | |
| CTTCAACATTGGAATCTGGA+GGG | + | chr4.2:10315803-10315822 | MS.gene059719:CDS | 40.0% | |
| GCCAGGAAATATATGCACAA+GGG | + | chr4.2:10318872-10318891 | MS.gene059719:intron | 40.0% | |
| GCTACAATAGAACGTAACAG+TGG | - | chr4.2:10315344-10315363 | None:intergenic | 40.0% | |
| GTAGCTTCAACATTGGAATC+TGG | + | chr4.2:10315799-10315818 | MS.gene059719:intron | 40.0% | |
| TAGTAACAAGCTGGTAAGAG+GGG | - | chr4.2:10317604-10317623 | None:intergenic | 40.0% | |
| TCATACTTGTATTGCATGGC+GGG | - | chr4.2:10316127-10316146 | None:intergenic | 40.0% | |
| TGCCAGGAAATATATGCACA+AGG | + | chr4.2:10318871-10318890 | MS.gene059719:intron | 40.0% | |
| TGGGCAAACTGGAATATTCA+CGG | + | chr4.2:10319877-10319896 | MS.gene059719:intron | 40.0% | |
| TGTTGCCAAACCTGTAAAGT+TGG | - | chr4.2:10317707-10317726 | None:intergenic | 40.0% | |
| TTCAATGCCTCAGTCTGAAA+TGG | - | chr4.2:10318681-10318700 | None:intergenic | 40.0% | |
| TTCCATGAGCTACTTGTGAT+TGG | - | chr4.2:10315415-10315434 | None:intergenic | 40.0% | |
| TTCTGATCCAAAGTGTGTTC+AGG | + | chr4.2:10315131-10315150 | MS.gene059719:intron | 40.0% | |
| TTGATTGAGGAAGAGGTTGA+TGG | + | chr4.2:10316841-10316860 | MS.gene059719:CDS | 40.0% | |
| TTGTGTGTGATTAGTGACCA+GGG | + | chr4.2:10318094-10318113 | MS.gene059719:intron | 40.0% | |
| ! | ACTTTGGATCAGAAGTGTGT+CGG | - | chr4.2:10315125-10315144 | None:intergenic | 40.0% |
| ! | AGCAACATGTCTTTTAGCAG+GGG | + | chr4.2:10318352-10318371 | MS.gene059719:intron | 40.0% |
| ! | GAAATGGAGTTAAAGGCATG+AGG | - | chr4.2:10319844-10319863 | None:intergenic | 40.0% |
| ! | GTGACTATTAGGGGAGTTTT+GGG | - | chr4.2:10315505-10315524 | None:intergenic | 40.0% |
| ! | TAGGGGTGTACATCAATACA+TGG | - | chr4.2:10318283-10318302 | None:intergenic | 40.0% |
| ! | TGTGACTATTAGGGGAGTTT+TGG | - | chr4.2:10315506-10315525 | None:intergenic | 40.0% |
| ! | TGTTTTGCAATAGGCAGATG+TGG | - | chr4.2:10316701-10316720 | None:intergenic | 40.0% |
| !! | ATGTCTGATGATGGCATGTA+CGG | + | chr4.2:10318531-10318550 | MS.gene059719:intron | 40.0% |
| !! | CAAAGGGAGGGTATTTAGAA+TGG | + | chr4.2:10315047-10315066 | MS.gene059719:intron | 40.0% |
| !! | TAACGGGTTGTTCTTTGAGT+CGG | + | chr4.2:10314654-10314673 | MS.gene059719:CDS | 40.0% |
| !! | TTTGTTAGCTTTGGGCAAAC+TGG | + | chr4.2:10319866-10319885 | MS.gene059719:intron | 40.0% |
| !! | TTTTTGAAGGCAGAAGATGG+TGG | + | chr4.2:10319987-10320006 | MS.gene059719:CDS | 40.0% |
| AGAACCAACTCTTCCTCAAG+GGG | - | chr4.2:10315838-10315857 | None:intergenic | 45.0% | |
| AGTAACAAGCTGGTAAGAGG+GGG | - | chr4.2:10317603-10317622 | None:intergenic | 45.0% | |
| ATAGATAAAAACGGGGGGAG+GGG | + | chr4.2:10316604-10316623 | MS.gene059719:intron | 45.0% | |
| ATATTGATCTCCCGTCTCCT+TGG | - | chr4.2:10317068-10317087 | None:intergenic | 45.0% | |
| ATCTTTCTTTCGCGAGAAGG+AGG | + | chr4.2:10316900-10316919 | MS.gene059719:CDS | 45.0% | |
| CAAGCTGGTGTGACTATTAG+GGG | - | chr4.2:10315514-10315533 | None:intergenic | 45.0% | |
| CAATAGATAAAAACGGGGGG+AGG | + | chr4.2:10316602-10316621 | MS.gene059719:intron | 45.0% | |
| CAGAACCAACTCTTCCTCAA+GGG | - | chr4.2:10315839-10315858 | None:intergenic | 45.0% | |
| CATTTATAGTCGAGGTCTGG+AGG | + | chr4.2:10317776-10317795 | MS.gene059719:intron | 45.0% | |
| CCAAACCTGTAAAGTTGGAC+AGG | - | chr4.2:10317702-10317721 | None:intergenic | 45.0% | |
| CCAAGCTGGTGTGACTATTA+GGG | - | chr4.2:10315515-10315534 | None:intergenic | 45.0% | |
| CCCCTTGTGCATATATTTCC+TGG | - | chr4.2:10318876-10318895 | None:intergenic | 45.0% | |
| CCTAGTAACAAGCTGGTAAG+AGG | - | chr4.2:10317606-10317625 | None:intergenic | 45.0% | |
| CCTGTCCAACTTTACAGGTT+TGG | + | chr4.2:10317699-10317718 | MS.gene059719:intron | 45.0% | |
| CTGCTTCATCGTGTAGAAGA+GGG | - | chr4.2:10318970-10318989 | None:intergenic | 45.0% | |
| CTGTTGTGCGGCCTATTAAT+TGG | + | chr4.2:10318748-10318767 | MS.gene059719:CDS | 45.0% | |
| GAATGTCCGTCCCACATTTA+CGG | + | chr4.2:10317435-10317454 | MS.gene059719:intron | 45.0% | |
| GCCTGCATGTGAATTACAAC+TGG | - | chr4.2:10319308-10319327 | None:intergenic | 45.0% | |
| GCTTCAACATTGGAATCTGG+AGG | + | chr4.2:10315802-10315821 | MS.gene059719:intron | 45.0% | |
| GTCAACACCTGAACACACTT+TGG | - | chr4.2:10315141-10315160 | None:intergenic | 45.0% | |
| GTTGTGTGTGATTAGTGACC+AGG | + | chr4.2:10318093-10318112 | MS.gene059719:intron | 45.0% | |
| TATAAGCTGCTCCAAGGAGA+CGG | + | chr4.2:10317054-10317073 | MS.gene059719:intron | 45.0% | |
| TATATTCTCAGGTGCCAAGC+TGG | - | chr4.2:10315529-10315548 | None:intergenic | 45.0% | |
| TCAGAACCAACTCTTCCTCA+AGG | - | chr4.2:10315840-10315859 | None:intergenic | 45.0% | |
| TCGGTGCAAGAAGGTTTCTA+CGG | + | chr4.2:10314706-10314725 | MS.gene059719:CDS | 45.0% | |
| TGACTGTGTGACAGAACCAT+AGG | - | chr4.2:10318639-10318658 | None:intergenic | 45.0% | |
| TGTGACATGGGTGAACAAAC+AGG | - | chr4.2:10317662-10317681 | None:intergenic | 45.0% | |
| TTCTCACACAATTCTCGGGT+CGG | - | chr4.2:10314634-10314653 | None:intergenic | 45.0% | |
| TTGACACTTAGCAGTGTCAC+AGG | + | chr4.2:10317310-10317329 | MS.gene059719:intron | 45.0% | |
| TTGTTCACCCATGTCACAGA+TGG | + | chr4.2:10317664-10317683 | MS.gene059719:intron | 45.0% | |
| ! | AGATGTACCAGTGGAAGCAT+TGG | + | chr4.2:10318910-10318929 | MS.gene059719:CDS | 45.0% |
| ! | AGTTCCTTTTACCGAGTCAG+TGG | + | chr4.2:10317413-10317432 | MS.gene059719:intron | 45.0% |
| ! | ATCTTTTAGCAGGGAGTCCA+TGG | - | chr4.2:10318126-10318145 | None:intergenic | 45.0% |
| ! | CTTGTCATTTCTACAGGTGG+AGG | + | chr4.2:10318723-10318742 | MS.gene059719:CDS | 45.0% |
| ! | GGGCGCTGTATATATGTTGT+TGG | + | chr4.2:10316071-10316090 | MS.gene059719:CDS | 45.0% |
| ! | TCTTTTAGCAGGGGAGTTCA+TGG | + | chr4.2:10318361-10318380 | MS.gene059719:intron | 45.0% |
| !! | CATTCCACTGACTCGGTAAA+AGG | - | chr4.2:10317420-10317439 | None:intergenic | 45.0% |
| !! | CCTCTTACCAGCTTGTTACT+AGG | + | chr4.2:10317603-10317622 | MS.gene059719:intron | 45.0% |
| !! | TCAGAAGTGTGTCGGTGTTA+CGG | - | chr4.2:10315117-10315136 | None:intergenic | 45.0% |
| !! | TGAGGAAGAGTTGGTTCTGA+AGG | + | chr4.2:10315840-10315859 | MS.gene059719:CDS | 45.0% |
| !! | TGTGTTCAGGTGTTGACATG+TGG | + | chr4.2:10315144-10315163 | MS.gene059719:intron | 45.0% |
| !! | TTGTATGGGAATGGATTGCC+AGG | + | chr4.2:10318855-10318874 | MS.gene059719:intron | 45.0% |
| !! | AAAAAATAATTTCTAAATTT+GGG | - | chr4.2:10319106-10319125 | None:intergenic | 5.0% |
| !! | ATTAATTGAAAAAAAAAAAA+AGG | + | chr4.2:10315637-10315656 | MS.gene059719:intron | 5.0% |
| !! | TAAAAAATAATTTCTAAATT+TGG | - | chr4.2:10319107-10319126 | None:intergenic | 5.0% |
| AAATGTTAACGAGTGCCCCC+GGG | - | chr4.2:10319213-10319232 | None:intergenic | 50.0% | |
| ACCTGTAAAGTTGGACAGGG+CGG | - | chr4.2:10317698-10317717 | None:intergenic | 50.0% | |
| ACTCGCTCCTAGTAACAAGC+TGG | - | chr4.2:10317613-10317632 | None:intergenic | 50.0% | |
| AGCAGGAGATGCATACACTG+CGG | + | chr4.2:10318985-10319004 | MS.gene059719:CDS | 50.0% | |
| AGGGCATAAGTTTCCCCTTG+AGG | + | chr4.2:10315822-10315841 | MS.gene059719:CDS | 50.0% | |
| AGGGCGAGAATTAGTTCCCA+CGG | - | chr4.2:10318951-10318970 | None:intergenic | 50.0% | |
| ATAAGCTGCTCCAAGGAGAC+GGG | + | chr4.2:10317055-10317074 | MS.gene059719:intron | 50.0% | |
| CCACTGTCCATCTGTGACAT+GGG | - | chr4.2:10317674-10317693 | None:intergenic | 50.0% | |
| CCCTAATAGTCACACCAGCT+TGG | + | chr4.2:10315512-10315531 | MS.gene059719:intron | 50.0% | |
| CCTCTTCTACACGATGAAGC+AGG | + | chr4.2:10318968-10318987 | MS.gene059719:CDS | 50.0% | |
| CCTGCTTCATCGTGTAGAAG+AGG | - | chr4.2:10318971-10318990 | None:intergenic | 50.0% | |
| GAAATGTTAACGAGTGCCCC+CGG | - | chr4.2:10319214-10319233 | None:intergenic | 50.0% | |
| GAGAAGGAGGTCAGTTGGAA+AGG | + | chr4.2:10316913-10316932 | MS.gene059719:intron | 50.0% | |
| GCCAAGCTGGTGTGACTATT+AGG | - | chr4.2:10315516-10315535 | None:intergenic | 50.0% | |
| GCTGTATTGCTACAGCGTAG+CGG | + | chr4.2:10317999-10318018 | MS.gene059719:intron | 50.0% | |
| GGTTGTTCTTTGAGTCGGAC+CGG | + | chr4.2:10314659-10314678 | MS.gene059719:CDS | 50.0% | |
| GTAGAGACAGCAAATGGGCA+TGG | + | chr4.2:10317527-10317546 | MS.gene059719:intron | 50.0% | |
| GTTTCCCCTTGAGGAAGAGT+TGG | + | chr4.2:10315831-10315850 | MS.gene059719:CDS | 50.0% | |
| TAGATAAAAACGGGGGGAGG+GGG | + | chr4.2:10316605-10316624 | MS.gene059719:intron | 50.0% | |
| TCCACTGTCCATCTGTGACA+TGG | - | chr4.2:10317675-10317694 | None:intergenic | 50.0% | |
| TCTCACACAATTCTCGGGTC+GGG | - | chr4.2:10314633-10314652 | None:intergenic | 50.0% | |
| TGACAGAACCATAGGCTAGC+CGG | - | chr4.2:10318631-10318650 | None:intergenic | 50.0% | |
| TTGCAGGCGCTAGAGCAAAT+TGG | + | chr4.2:10319960-10319979 | MS.gene059719:intron | 50.0% | |
| ! | GCACTGACACTTCACATCGA+AGG | - | chr4.2:10317205-10317224 | None:intergenic | 50.0% |
| !! | AAGGTGCTTAAAGAGTGCCC+CGG | + | chr4.2:10319192-10319211 | MS.gene059719:intron | 50.0% |
| !! | ATGCAGGAATGATGGGCTCT+GGG | + | chr4.2:10316180-10316199 | MS.gene059719:intron | 50.0% |
| !! | CAGAAGTGTGTCGGTGTTAC+GGG | - | chr4.2:10315116-10315135 | None:intergenic | 50.0% |
| !! | GAATTGTTCCGGCTAGCCTA+TGG | + | chr4.2:10318620-10318639 | MS.gene059719:intron | 50.0% |
| !! | TCAGACGATTCGGTGCAAGA+AGG | + | chr4.2:10314697-10314716 | MS.gene059719:CDS | 50.0% |
| !! | TGAGACTCTAGCATTGGCGT+TGG | - | chr4.2:10319378-10319397 | None:intergenic | 50.0% |
| AACAAGCTGGTAAGAGGGGG+TGG | - | chr4.2:10317600-10317619 | None:intergenic | 55.0% | |
| AATGTTAACGAGTGCCCCCG+GGG | - | chr4.2:10319212-10319231 | None:intergenic | 55.0% | |
| ACCGCCCTGTCCAACTTTAC+AGG | + | chr4.2:10317694-10317713 | MS.gene059719:intron | 55.0% | |
| CACTTAGCAGTGTCACAGGC+AGG | + | chr4.2:10317314-10317333 | MS.gene059719:intron | 55.0% | |
| CCCATGTCACAGATGGACAG+TGG | + | chr4.2:10317671-10317690 | MS.gene059719:intron | 55.0% | |
| CTGTTGGCCAATGCTTCCAC+TGG | - | chr4.2:10318920-10318939 | None:intergenic | 55.0% | |
| GCCAACAGAATTGCAGCCGT+GGG | + | chr4.2:10318932-10318951 | MS.gene059719:CDS | 55.0% | |
| TAGCAGGGAGTCCATGGCAT+AGG | - | chr4.2:10318120-10318139 | None:intergenic | 55.0% | |
| TCCCACGGCTGCAATTCTGT+TGG | - | chr4.2:10318936-10318955 | None:intergenic | 55.0% | |
| TCTTGTTAACGAGTGCCCCC+GGG | + | chr4.2:10319065-10319084 | MS.gene059719:intron | 55.0% | |
| TTCGCGAGAAGGAGGTCAGT+TGG | + | chr4.2:10316908-10316927 | MS.gene059719:intron | 55.0% | |
| TTCTCGGGTCGGGTAAGAAC+CGG | - | chr4.2:10314623-10314642 | None:intergenic | 55.0% | |
| ! | GGACGGACATTCCACTGACT+CGG | - | chr4.2:10317427-10317446 | None:intergenic | 55.0% |
| ! | GTCTTGTTAACGAGTGCCCC+CGG | + | chr4.2:10319064-10319083 | MS.gene059719:intron | 55.0% |
| !! | AAGCACTGACACGTCGACAC+CGG | + | chr4.2:10317089-10317108 | MS.gene059719:intron | 55.0% |
| !! | AGGTGCTTAAAGAGTGCCCC+GGG | + | chr4.2:10319193-10319212 | MS.gene059719:intron | 55.0% |
| !! | ATGCTTAAAGAGTGCCCCGG+GGG | - | chr4.2:10319083-10319102 | None:intergenic | 55.0% |
| !! | CATGCAGGAATGATGGGCTC+TGG | + | chr4.2:10316179-10316198 | MS.gene059719:intron | 55.0% |
| !! | GATGCTTAAAGAGTGCCCCG+GGG | - | chr4.2:10319084-10319103 | None:intergenic | 55.0% |
| !! | GCTCTGGGAAGACAACTGTG+GGG | + | chr4.2:10316195-10316214 | MS.gene059719:CDS | 55.0% |
| !! | GGATGCTTAAAGAGTGCCCC+GGG | - | chr4.2:10319085-10319104 | None:intergenic | 55.0% |
| !! | GGCTCTGGGAAGACAACTGT+GGG | + | chr4.2:10316194-10316213 | MS.gene059719:CDS | 55.0% |
| !! | GGGATGCTTAAAGAGTGCCC+CGG | - | chr4.2:10319086-10319105 | None:intergenic | 55.0% |
| AGTGACCAGGGCCTATGCCA+TGG | + | chr4.2:10318106-10318125 | MS.gene059719:intron | 60.0% | |
| CTTGTTAACGAGTGCCCCCG+GGG | + | chr4.2:10319066-10319085 | MS.gene059719:intron | 60.0% | |
| GGAGGGGGTCAGTTATCCTG+GGG | + | chr4.2:10316620-10316639 | MS.gene059719:intron | 60.0% | |
| GGCCAACAGAATTGCAGCCG+TGG | + | chr4.2:10318931-10318950 | MS.gene059719:CDS | 60.0% | |
| GGGAGGGGGTCAGTTATCCT+GGG | + | chr4.2:10316619-10316638 | MS.gene059719:intron | 60.0% | |
| !! | CAGGTGGAGGTGCTGTTGTG+CGG | + | chr4.2:10318736-10318755 | MS.gene059719:CDS | 60.0% |
| !! | GGGCTCTGGGAAGACAACTG+TGG | + | chr4.2:10316193-10316212 | MS.gene059719:CDS | 60.0% |
| !! | GGTGCTTAAAGAGTGCCCCG+GGG | + | chr4.2:10319194-10319213 | MS.gene059719:intron | 60.0% |
| !! | GTGCTTAAAGAGTGCCCCGG+GGG | + | chr4.2:10319195-10319214 | MS.gene059719:intron | 60.0% |
| GGAGTCCATGGCATAGGCCC+TGG | - | chr4.2:10318114-10318133 | None:intergenic | 65.0% | |
| GGGGAGGGGGTCAGTTATCC+TGG | + | chr4.2:10316618-10316637 | MS.gene059719:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 10314608 | 10320022 | 10314608 | ID=MS.gene059719 |
| chr4.2 | mRNA | 10314608 | 10320022 | 10314608 | ID=MS.gene059719.t1;Parent=MS.gene059719 |
| chr4.2 | exon | 10314608 | 10314758 | 10314608 | ID=MS.gene059719.t1.exon1;Parent=MS.gene059719.t1 |
| chr4.2 | CDS | 10314608 | 10314758 | 10314608 | ID=cds.MS.gene059719.t1;Parent=MS.gene059719.t1 |
| chr4.2 | exon | 10315803 | 10315861 | 10315803 | ID=MS.gene059719.t1.exon2;Parent=MS.gene059719.t1 |
| chr4.2 | CDS | 10315803 | 10315861 | 10315803 | ID=cds.MS.gene059719.t1;Parent=MS.gene059719.t1 |
| chr4.2 | exon | 10316038 | 10316092 | 10316038 | ID=MS.gene059719.t1.exon3;Parent=MS.gene059719.t1 |
| chr4.2 | CDS | 10316038 | 10316092 | 10316038 | ID=cds.MS.gene059719.t1;Parent=MS.gene059719.t1 |
| chr4.2 | exon | 10316186 | 10316258 | 10316186 | ID=MS.gene059719.t1.exon4;Parent=MS.gene059719.t1 |
| chr4.2 | CDS | 10316186 | 10316258 | 10316186 | ID=cds.MS.gene059719.t1;Parent=MS.gene059719.t1 |
| chr4.2 | exon | 10316834 | 10316921 | 10316834 | ID=MS.gene059719.t1.exon5;Parent=MS.gene059719.t1 |
| chr4.2 | CDS | 10316834 | 10316921 | 10316834 | ID=cds.MS.gene059719.t1;Parent=MS.gene059719.t1 |
| chr4.2 | exon | 10318687 | 10318769 | 10318687 | ID=MS.gene059719.t1.exon6;Parent=MS.gene059719.t1 |
| chr4.2 | CDS | 10318687 | 10318769 | 10318687 | ID=cds.MS.gene059719.t1;Parent=MS.gene059719.t1 |
| chr4.2 | exon | 10318877 | 10319006 | 10318877 | ID=MS.gene059719.t1.exon7;Parent=MS.gene059719.t1 |
| chr4.2 | CDS | 10318877 | 10319006 | 10318877 | ID=cds.MS.gene059719.t1;Parent=MS.gene059719.t1 |
| chr4.2 | exon | 10319326 | 10319404 | 10319326 | ID=MS.gene059719.t1.exon8;Parent=MS.gene059719.t1 |
| chr4.2 | CDS | 10319326 | 10319404 | 10319326 | ID=cds.MS.gene059719.t1;Parent=MS.gene059719.t1 |
| chr4.2 | exon | 10319759 | 10319823 | 10319759 | ID=MS.gene059719.t1.exon9;Parent=MS.gene059719.t1 |
| chr4.2 | CDS | 10319759 | 10319823 | 10319759 | ID=cds.MS.gene059719.t1;Parent=MS.gene059719.t1 |
| chr4.2 | exon | 10319966 | 10320022 | 10319966 | ID=MS.gene059719.t1.exon10;Parent=MS.gene059719.t1 |
| chr4.2 | CDS | 10319966 | 10320022 | 10319966 | ID=cds.MS.gene059719.t1;Parent=MS.gene059719.t1 |
| Gene Sequence |
| Protein sequence |
