Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28875.t1 | XP_003629259.1 | 89.4 | 404 | 39 | 2 | 1 | 401 | 1 | 403 | 6.20E-162 | 580.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28875.t1 | Q94K80 | 32.3 | 368 | 204 | 13 | 46 | 400 | 101 | 436 | 2.3e-16 | 88.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28875.t1 | G7LB62 | 89.4 | 404 | 39 | 2 | 1 | 401 | 1 | 403 | 4.4e-162 | 580.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050750 | MS.gene28875 | -0.80276 | 4.81E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene28875 | -0.804625 | 1.97E-49 | -1.69E-46 |
| MS.gene052176 | MS.gene28875 | -0.806599 | 7.61E-50 | -1.69E-46 |
| MS.gene052309 | MS.gene28875 | 0.823769 | 1.16E-53 | -1.69E-46 |
| MS.gene052358 | MS.gene28875 | 0.85344 | 2.39E-61 | -1.69E-46 |
| MS.gene052361 | MS.gene28875 | 0.801357 | 9.35E-49 | -1.69E-46 |
| MS.gene052965 | MS.gene28875 | 0.814408 | 1.56E-51 | -1.69E-46 |
| MS.gene054405 | MS.gene28875 | -0.800799 | 1.22E-48 | -1.69E-46 |
| MS.gene060572 | MS.gene28875 | -0.814684 | 1.36E-51 | -1.69E-46 |
| MS.gene061040 | MS.gene28875 | 0.860374 | 2.16E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28875.t1 | MTR_8g075120 | 93.812 | 404 | 21 | 2 | 1 | 401 | 1 | 403 | 0.0 | 680 |
| MS.gene28875.t1 | MTR_5g022790 | 44.700 | 434 | 178 | 17 | 4 | 400 | 15 | 423 | 1.29e-88 | 282 |
| MS.gene28875.t1 | MTR_5g022790 | 49.158 | 297 | 113 | 11 | 126 | 400 | 8 | 288 | 8.39e-76 | 241 |
| MS.gene28875.t1 | MTR_5g022790 | 49.158 | 297 | 113 | 11 | 126 | 400 | 8 | 288 | 1.60e-74 | 241 |
| MS.gene28875.t1 | MTR_1g025920 | 38.298 | 423 | 198 | 18 | 17 | 407 | 91 | 482 | 3.58e-48 | 171 |
| MS.gene28875.t1 | MTR_1g025920 | 38.702 | 416 | 192 | 18 | 17 | 400 | 91 | 475 | 6.93e-48 | 171 |
| MS.gene28875.t1 | MTR_3g114450 | 33.333 | 381 | 178 | 16 | 59 | 399 | 88 | 432 | 1.87e-34 | 133 |
| MS.gene28875.t1 | MTR_3g114340 | 34.054 | 370 | 165 | 18 | 69 | 399 | 33 | 362 | 8.04e-31 | 122 |
| MS.gene28875.t1 | MTR_3g114450 | 31.476 | 359 | 170 | 16 | 59 | 377 | 88 | 410 | 6.10e-24 | 103 |
| MS.gene28875.t1 | MTR_5g088200 | 45.161 | 93 | 50 | 1 | 310 | 401 | 290 | 382 | 6.18e-17 | 83.6 |
| MS.gene28875.t1 | MTR_7g117595 | 35.455 | 110 | 69 | 1 | 299 | 406 | 80 | 189 | 8.29e-13 | 70.1 |
| MS.gene28875.t1 | MTR_7g117595 | 35.455 | 110 | 69 | 1 | 299 | 406 | 80 | 189 | 1.09e-12 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28875.t1 | AT4G35890 | 35.219 | 389 | 189 | 17 | 37 | 400 | 86 | 436 | 1.48e-43 | 159 |
| MS.gene28875.t1 | AT4G35890 | 34.153 | 366 | 178 | 17 | 37 | 377 | 86 | 413 | 4.22e-36 | 137 |
| MS.gene28875.t1 | AT5G66100 | 33.250 | 400 | 193 | 18 | 26 | 400 | 52 | 402 | 4.46e-33 | 129 |
| MS.gene28875.t1 | AT5G66100 | 30.745 | 322 | 158 | 17 | 49 | 345 | 66 | 347 | 1.71e-11 | 65.5 |
Find 149 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCACCAATCCCACCTTATA+TGG | 0.158471 | 8.2:-29871308 | MS.gene28875:CDS |
| AATCCTGCTATTAAATTTAG+AGG | 0.222995 | 8.2:+29870870 | None:intergenic |
| ACCAGATTGACTACTATTTC+AGG | 0.266021 | 8.2:-29871058 | MS.gene28875:intron |
| GGTGGGATTGGTGGTGGTGG+CGG | 0.296364 | 8.2:+29871316 | None:intergenic |
| GTGGGATTGGTGGTGGTGGC+GGG | 0.299119 | 8.2:+29871317 | None:intergenic |
| TGGCGGCTGGCGGCCTCCAT+TGG | 0.323639 | 8.2:+29871675 | None:intergenic |
| CTCCAATGCTGCTGCTTCTT+CGG | 0.327782 | 8.2:-29872232 | MS.gene28875:CDS |
| GTCTGCTTCCAGAGTTAAAA+TGG | 0.329463 | 8.2:+29871476 | None:intergenic |
| TCCGGTTCCTGGATGAATTT+CGG | 0.329667 | 8.2:+29871536 | None:intergenic |
| CCACCTTATATGGGCTCATA+TGG | 0.349352 | 8.2:-29871298 | MS.gene28875:CDS |
| CAATCATAACTCTGCTCAAA+TGG | 0.349628 | 8.2:-29871605 | MS.gene28875:CDS |
| GGGATTGGTGGTGGTGGCGG+GGG | 0.349939 | 8.2:+29871319 | None:intergenic |
| TGGGATTGGTGGTGGTGGCG+GGG | 0.359026 | 8.2:+29871318 | None:intergenic |
| TGGCGATTTCGCCGGAGCTT+TGG | 0.359704 | 8.2:+29872170 | None:intergenic |
| CTGGCTCCAAGGTGCGGCGG+CGG | 0.361110 | 8.2:+29872407 | None:intergenic |
| TTAACGGTAGAGACAATTAT+AGG | 0.363096 | 8.2:-29871405 | MS.gene28875:CDS |
| GAAGAGGAACATGGATGATC+AGG | 0.368604 | 8.2:-29870901 | MS.gene28875:CDS |
| CCAAGGTGCGGCGGCGGGAG+AGG | 0.373375 | 8.2:+29872413 | None:intergenic |
| GTTGTAGACCACCGCCATTC+CGG | 0.378736 | 8.2:+29871518 | None:intergenic |
| CGGCGCTGAGGCTGATCATT+GGG | 0.381172 | 8.2:+29871556 | None:intergenic |
| GATTTGTTCCACAGTTTGTA+AGG | 0.390687 | 8.2:-29871375 | MS.gene28875:CDS |
| ACCACCGCCATTCCGGTTCC+TGG | 0.392452 | 8.2:+29871525 | None:intergenic |
| CCTCTCCCGCCGCCGCACCT+TGG | 0.396404 | 8.2:-29872413 | MS.gene28875:CDS |
| CTCTGGAAGCAGACGTGATC+AGG | 0.400093 | 8.2:-29871467 | MS.gene28875:CDS |
| TATCCATATGAGCCCATATA+AGG | 0.400182 | 8.2:+29871295 | None:intergenic |
| ACAAACTGTGGAACAAATCT+TGG | 0.401130 | 8.2:+29871379 | None:intergenic |
| CAACTCATCAGAAAACTTAT+CGG | 0.402114 | 8.2:-29871720 | MS.gene28875:CDS |
| GGTGGTGATGGCGGTGGTGG+TGG | 0.410660 | 8.2:+29872150 | None:intergenic |
| GCCATCACCACCACAGGAAT+TGG | 0.412805 | 8.2:-29872139 | MS.gene28875:CDS |
| GCGGCGGAGGAAGGAGGAGG+AGG | 0.419591 | 8.2:+29872336 | None:intergenic |
| TGATCAGGACCGCGGAAATC+AGG | 0.421066 | 8.2:-29871452 | MS.gene28875:CDS |
| TGTGGTGGTGATGGCGGTGG+TGG | 0.424964 | 8.2:+29872147 | None:intergenic |
| TGCTGCTGCTTCTTCGGTCA+TGG | 0.429405 | 8.2:-29872226 | MS.gene28875:CDS |
| GGCGGGAGAGGAAGCGTTCA+TGG | 0.432822 | 8.2:+29872425 | None:intergenic |
| CTCTCCTCAGAAGCAAGTTA+AGG | 0.433186 | 8.2:-29871776 | MS.gene28875:CDS |
| TGCACAAACGGTACACTTCT+CGG | 0.433948 | 8.2:+29871143 | None:intergenic |
| CGATTTCGCCGGAGCTTTGG+CGG | 0.441633 | 8.2:+29872173 | None:intergenic |
| GGAATTGGTGAAACCTTCCT+TGG | 0.443310 | 8.2:-29872124 | MS.gene28875:CDS |
| ACCTGAAATAGTAGTCAATC+TGG | 0.445908 | 8.2:+29871057 | None:intergenic |
| ATCTGAATCCGCCAAAGCTC+CGG | 0.446417 | 8.2:-29872181 | MS.gene28875:CDS |
| TGACAACATTCAGATTGTAT+TGG | 0.447780 | 8.2:-29869859 | MS.gene28875:CDS |
| TTCATCTGTTGTTGAAGTGC+AGG | 0.450747 | 8.2:-29869823 | MS.gene28875:intron |
| GCGCAGACATTTGTGGCGGC+TGG | 0.450914 | 8.2:+29871662 | None:intergenic |
| GAAGACATCGACAACACTTC+CGG | 0.453122 | 8.2:-29872282 | MS.gene28875:CDS |
| ACAGCGGCGGAGGAAGGAGG+AGG | 0.454286 | 8.2:+29872333 | None:intergenic |
| TCGGCGCTGAGGCTGATCAT+TGG | 0.454767 | 8.2:+29871555 | None:intergenic |
| TTGGAGGGTTTACTCCAAAC+AGG | 0.455281 | 8.2:+29872249 | None:intergenic |
| CAGCGGTGGAGGCAACAATC+TGG | 0.459815 | 8.2:+29872388 | None:intergenic |
| TGGCTCCAAGGTGCGGCGGC+GGG | 0.460627 | 8.2:+29872408 | None:intergenic |
| GCCGAAATTCATCCAGGAAC+CGG | 0.461700 | 8.2:-29871537 | MS.gene28875:CDS |
| GTTCCTCTAAATTTAATAGC+AGG | 0.461861 | 8.2:-29870873 | MS.gene28875:CDS |
| GGTTTCGTTGCTGTCCCACC+AGG | 0.463812 | 8.2:-29871634 | MS.gene28875:CDS |
| GACCGAAGAAGCAGCAGCAT+TGG | 0.465776 | 8.2:+29872230 | None:intergenic |
| GAGGAAGCGTTCATGGCCAT+TGG | 0.466060 | 8.2:+29872432 | None:intergenic |
| GAAGATATCGGTTGCACAAA+CGG | 0.466726 | 8.2:+29871131 | None:intergenic |
| CCTTGAGGCGCAGACATTTG+TGG | 0.469144 | 8.2:+29871655 | None:intergenic |
| CCCATATAAGGTGGGATTGG+TGG | 0.472982 | 8.2:+29871307 | None:intergenic |
| TAGTATTGGGCATGATTAGT+AGG | 0.473060 | 8.2:+29871343 | None:intergenic |
| ATATAAGGTGGGATTGGTGG+TGG | 0.474048 | 8.2:+29871310 | None:intergenic |
| AATTCAAACGCGTCTTCCAA+TGG | 0.478217 | 8.2:-29871691 | MS.gene28875:CDS |
| TTGAGCAGAGTTATGATTGT+GGG | 0.478241 | 8.2:+29871609 | None:intergenic |
| ATCGACCTTGCCTCAATCGC+AGG | 0.478474 | 8.2:-29872097 | MS.gene28875:intron |
| ATGGGCTCATATGGATATCA+TGG | 0.478647 | 8.2:-29871289 | MS.gene28875:intron |
| CGAAGAAGCAGCAGCATTGG+AGG | 0.481797 | 8.2:+29872233 | None:intergenic |
| TACGGCGGAAGCAGCGGTGG+AGG | 0.484516 | 8.2:+29872377 | None:intergenic |
| TTAGTATGCAACTCAGAATC+CGG | 0.489983 | 8.2:+29871089 | None:intergenic |
| GAGGAAGGAGGAGGAGGTGA+CGG | 0.494008 | 8.2:+29872342 | None:intergenic |
| GGAACATGGATGATCAGGGC+TGG | 0.494066 | 8.2:-29870896 | MS.gene28875:CDS |
| CCACCAATCCCACCTTATAT+GGG | 0.499497 | 8.2:-29871307 | MS.gene28875:CDS |
| CTAACGCTTCAAATGATGTA+TGG | 0.503281 | 8.2:-29871188 | MS.gene28875:CDS |
| GAAAGTGTCGACAGCGGCGG+AGG | 0.507299 | 8.2:+29872323 | None:intergenic |
| CGGTCATGGATGCTGACTCA+TGG | 0.507318 | 8.2:-29872212 | MS.gene28875:CDS |
| ACCAATTCCTGTGGTGGTGA+TGG | 0.511057 | 8.2:+29872138 | None:intergenic |
| GAGCCCATATAAGGTGGGAT+TGG | 0.512163 | 8.2:+29871304 | None:intergenic |
| GTGTCGACAGCGGCGGAGGA+AGG | 0.512183 | 8.2:+29872327 | None:intergenic |
| GTCTTCCGCCGCCTCAGTGA+CGG | 0.512716 | 8.2:+29872299 | None:intergenic |
| TCCTGTGGTGGTGATGGCGG+TGG | 0.513238 | 8.2:+29872144 | None:intergenic |
| TTGGGCACAAATCCAGCTCT+TGG | 0.515928 | 8.2:+29871574 | None:intergenic |
| GTATCCTTAACTTGCTTCTG+AGG | 0.520478 | 8.2:+29871772 | None:intergenic |
| ACCACCGCCATCACCACCAC+AGG | 0.524419 | 8.2:-29872145 | MS.gene28875:CDS |
| CATACATCATTTGAAGCGTT+AGG | 0.525907 | 8.2:+29871189 | None:intergenic |
| TAAGGTGGGATTGGTGGTGG+TGG | 0.528773 | 8.2:+29871313 | None:intergenic |
| TCCAGGAACCGGAATGGCGG+TGG | 0.529103 | 8.2:-29871526 | MS.gene28875:CDS |
| CTCAGCGCCGAAATTCATCC+AGG | 0.529121 | 8.2:-29871543 | MS.gene28875:CDS |
| AGGTACGGCGGAAGCAGCGG+TGG | 0.532026 | 8.2:+29872374 | None:intergenic |
| CCACAAATGTCTGCGCCTCA+AGG | 0.534512 | 8.2:-29871655 | MS.gene28875:CDS |
| ATGGAACATCTACCAAGAGC+TGG | 0.535798 | 8.2:-29871586 | MS.gene28875:CDS |
| GCATGATTAGTAGGCGGTGG+AGG | 0.541418 | 8.2:+29871352 | None:intergenic |
| GGTGGTGGTGGCGATTTCGC+CGG | 0.543934 | 8.2:+29872162 | None:intergenic |
| GAACATGGATGATCAGGGCT+GGG | 0.545097 | 8.2:-29870895 | MS.gene28875:CDS |
| CAGACATTTGTGGCGGCTGG+CGG | 0.546833 | 8.2:+29871665 | None:intergenic |
| TGCAACTCAGAATCCGGAGG+TGG | 0.551141 | 8.2:+29871095 | None:intergenic |
| GTTCGGATGAGGCAGGAAGC+GGG | 0.552139 | 8.2:-29869471 | MS.gene28875:intron |
| GCAACGACACATACTTGAAG+AGG | 0.552646 | 8.2:-29870917 | MS.gene28875:CDS |
| CTCGGAGGCTCCACATGCAA+AGG | 0.554785 | 8.2:+29871161 | None:intergenic |
| TCGACAGCGGCGGAGGAAGG+AGG | 0.564961 | 8.2:+29872330 | None:intergenic |
| CCATATGAGCCCATATAAGG+TGG | 0.568642 | 8.2:+29871298 | None:intergenic |
| AAGCAAGTTAAGGATACTGC+AGG | 0.569915 | 8.2:-29871766 | MS.gene28875:CDS |
| TTGGCGGATTCAGATAAAGC+AGG | 0.573000 | 8.2:+29872189 | None:intergenic |
| TGGGCATGATTAGTAGGCGG+TGG | 0.573030 | 8.2:+29871349 | None:intergenic |
| GGAGGTGACGGCGATGAATG+AGG | 0.573341 | 8.2:+29872354 | None:intergenic |
| TTTCGCCGTCACTGAGGCGG+CGG | 0.577187 | 8.2:-29872304 | MS.gene28875:CDS |
| AACAATCTGGCTCCAAGGTG+CGG | 0.577674 | 8.2:+29872401 | None:intergenic |
| GAGGCAACAATCTGGCTCCA+AGG | 0.579221 | 8.2:+29872396 | None:intergenic |
| GGTCTACAACCACGCGGAGA+TGG | 0.584916 | 8.2:-29871505 | MS.gene28875:CDS |
| CCGGTGGTAAGAGACCTGTT+TGG | 0.585862 | 8.2:-29872263 | MS.gene28875:CDS |
| AAGAGGAACATGGATGATCA+GGG | 0.588462 | 8.2:-29870900 | MS.gene28875:CDS |
| GGTTTCACCAATTCCTGTGG+TGG | 0.591849 | 8.2:+29872132 | None:intergenic |
| CACTTTCGCCGTCACTGAGG+CGG | 0.594778 | 8.2:-29872307 | MS.gene28875:CDS |
| CTGGATGAATTTCGGCGCTG+AGG | 0.595383 | 8.2:+29871544 | None:intergenic |
| CACATACTTGAAGAGGAACA+TGG | 0.596708 | 8.2:-29870910 | MS.gene28875:CDS |
| AGGACCGCGGAAATCAGGAC+TGG | 0.598875 | 8.2:-29871447 | MS.gene28875:CDS |
| ATGAGGTACGGCGGAAGCAG+CGG | 0.604517 | 8.2:+29872371 | None:intergenic |
| GAGTTATGATTGTGGGACCC+TGG | 0.608836 | 8.2:+29871616 | None:intergenic |
| GTATGGTCCACCTTTGCATG+TGG | 0.613005 | 8.2:-29871171 | MS.gene28875:CDS |
| AATTCATCCAGGAACCGGAA+TGG | 0.615009 | 8.2:-29871532 | MS.gene28875:CDS |
| AACAACAGATGAAGTACGAA+CGG | 0.617545 | 8.2:+29869833 | None:intergenic |
| TGACGGCGATGAATGAGGTA+CGG | 0.620582 | 8.2:+29872359 | None:intergenic |
| GAAGAAGCAGCAGCATTGGA+GGG | 0.621002 | 8.2:+29872234 | None:intergenic |
| CCAAACAGGTCTCTTACCAC+CGG | 0.621816 | 8.2:+29872263 | None:intergenic |
| GGAGGCTCCACATGCAAAGG+TGG | 0.622207 | 8.2:+29871164 | None:intergenic |
| CATATGAGCCCATATAAGGT+GGG | 0.622209 | 8.2:+29871299 | None:intergenic |
| TTTGAGCAGAGTTATGATTG+TGG | 0.622984 | 8.2:+29871608 | None:intergenic |
| CATTCCAGTCCTGATTTCCG+CGG | 0.624273 | 8.2:+29871443 | None:intergenic |
| AAATACCTGCGATTGAGGCA+AGG | 0.626925 | 8.2:+29872092 | None:intergenic |
| TATGATTGTGGGACCCTGGT+GGG | 0.628962 | 8.2:+29871620 | None:intergenic |
| AGGCAAGGTCGATAAATCCA+AGG | 0.629817 | 8.2:+29872107 | None:intergenic |
| TGAGGCGCAGACATTTGTGG+CGG | 0.632231 | 8.2:+29871658 | None:intergenic |
| GGCGAAAGTGTCGACAGCGG+CGG | 0.635606 | 8.2:+29872320 | None:intergenic |
| GAAGGTTTCACCAATTCCTG+TGG | 0.639283 | 8.2:+29872129 | None:intergenic |
| AAGGTCGATAAATCCAAGGA+AGG | 0.645541 | 8.2:+29872111 | None:intergenic |
| TCATCCAGGAACCGGAATGG+CGG | 0.654453 | 8.2:-29871529 | MS.gene28875:CDS |
| TCAAACGCGTCTTCCAATGG+AGG | 0.654894 | 8.2:-29871688 | MS.gene28875:CDS |
| GTTTCGTTGCTGTCCCACCA+GGG | 0.657439 | 8.2:-29871633 | MS.gene28875:CDS |
| AATCTGGCTCCAAGGTGCGG+CGG | 0.658713 | 8.2:+29872404 | None:intergenic |
| AATTCCTGTGGTGGTGATGG+CGG | 0.664267 | 8.2:+29872141 | None:intergenic |
| GTATGCAACTCAGAATCCGG+AGG | 0.681468 | 8.2:+29871092 | None:intergenic |
| AGCAGACGTGATCAGGACCG+CGG | 0.696086 | 8.2:-29871460 | MS.gene28875:CDS |
| GACATCGACAACACTTCCGG+TGG | 0.701044 | 8.2:-29872279 | MS.gene28875:CDS |
| GACGGCGAAAGTGTCGACAG+CGG | 0.707075 | 8.2:+29872317 | None:intergenic |
| CGACACTTTCGCCGTCACTG+AGG | 0.708576 | 8.2:-29872310 | MS.gene28875:CDS |
| GGTGGAGGCCTTACAAACTG+TGG | 0.712069 | 8.2:+29871367 | None:intergenic |
| CGGCGATGAATGAGGTACGG+CGG | 0.718688 | 8.2:+29872362 | None:intergenic |
| TATTGGGCATGATTAGTAGG+CGG | 0.723347 | 8.2:+29871346 | None:intergenic |
| GGGACAGCAACGAAACCTTG+AGG | 0.727311 | 8.2:+29871640 | None:intergenic |
| TTATGATTGTGGGACCCTGG+TGG | 0.738203 | 8.2:+29871619 | None:intergenic |
| TGGTGAGAACCATCTCCGCG+TGG | 0.763757 | 8.2:+29871496 | None:intergenic |
| ACAAACGGTACACTTCTCGG+AGG | 0.802512 | 8.2:+29871146 | None:intergenic |
| GGCGGTGGTCTACAACCACG+CGG | 0.809396 | 8.2:-29871511 | MS.gene28875:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTACTATTTTTTGATT+TGG | - | chr8.2:29871624-29871643 | MS.gene28875:CDS | 10.0% |
| !!! | ATTGTAATTTTTTTAAATAG+GGG | + | chr8.2:29871337-29871356 | None:intergenic | 10.0% |
| !! | ATAAAATTAGAAAATATGAG+TGG | - | chr8.2:29871707-29871726 | MS.gene28875:CDS | 15.0% |
| !! | ATTCAATAACAATTTGTATT+AGG | - | chr8.2:29871262-29871281 | MS.gene28875:intron | 15.0% |
| !! | CAAAACAATAAAATGAAAAT+TGG | + | chr8.2:29870875-29870894 | None:intergenic | 15.0% |
| !! | GATAATATCAATTATAATGT+GGG | - | chr8.2:29871936-29871955 | MS.gene28875:intron | 15.0% |
| !! | TCAAAAGATTATTAATACAA+AGG | + | chr8.2:29871589-29871608 | None:intergenic | 15.0% |
| !! | TGATAATATCAATTATAATG+TGG | - | chr8.2:29871935-29871954 | MS.gene28875:intron | 15.0% |
| !!! | AATCTGTTACTTTTATTTTT+AGG | - | chr8.2:29872192-29872211 | MS.gene28875:CDS | 15.0% |
| !!! | ATCTGTTACTTTTATTTTTA+GGG | - | chr8.2:29872193-29872212 | MS.gene28875:CDS | 15.0% |
| !!! | CTTTTCTTAAACAATTTTAA+TGG | - | chr8.2:29872382-29872401 | MS.gene28875:CDS | 15.0% |
| !!! | GTATTAATAATCTTTTGATA+TGG | - | chr8.2:29871591-29871610 | MS.gene28875:CDS | 15.0% |
| !!! | TTGTAATTTTTTTAAATAGG+GGG | + | chr8.2:29871336-29871355 | None:intergenic | 15.0% |
| !! | AAAAATATTGCAGAAGATAT+CGG | + | chr8.2:29870768-29870787 | None:intergenic | 20.0% |
| !! | ATTCAATAAAGTAAGTTGTT+TGG | - | chr8.2:29871034-29871053 | MS.gene28875:intron | 20.0% |
| !! | GCATATAACTGAAATATATT+TGG | - | chr8.2:29869934-29869953 | MS.gene28875:intron | 20.0% |
| !!! | AATATATTTGGAATTGTTAC+TGG | - | chr8.2:29869946-29869965 | MS.gene28875:intron | 20.0% |
| !!! | AGATGTTATTTTGTGAATTA+TGG | - | chr8.2:29870635-29870654 | MS.gene28875:intron | 20.0% |
| !!! | ATTTTTAGGGTGATAAAATA+AGG | - | chr8.2:29872206-29872225 | MS.gene28875:CDS | 20.0% |
| !!! | GATGTTATTTTGTGAATTAT+GGG | - | chr8.2:29870636-29870655 | MS.gene28875:intron | 20.0% |
| !!! | GCTCATAATAGAAATTTTAA+CGG | - | chr8.2:29870463-29870482 | MS.gene28875:intron | 20.0% |
| !!! | GTTTTAATTAAATCTGACAT+GGG | - | chr8.2:29871074-29871093 | MS.gene28875:CDS | 20.0% |
| !!! | TGTTTTAATTAAATCTGACA+TGG | - | chr8.2:29871073-29871092 | MS.gene28875:CDS | 20.0% |
| !!! | TTTTAATGGAGAATATTGTT+CGG | - | chr8.2:29872396-29872415 | MS.gene28875:CDS | 20.0% |
| !!! | TTTTGTCATTTTCTTTCATA+GGG | - | chr8.2:29871512-29871531 | MS.gene28875:CDS | 20.0% |
| ! | AAATTAGAAAATATGAGTGG+AGG | - | chr8.2:29871710-29871729 | MS.gene28875:CDS | 25.0% |
| ! | AACCCTAACTTGATAAATAA+AGG | + | chr8.2:29869882-29869901 | None:intergenic | 25.0% |
| ! | AAGTGAAAATCAAAAGGATT+TGG | + | chr8.2:29871818-29871837 | None:intergenic | 25.0% |
| ! | AATAAATAAGCAACCAAAGT+AGG | + | chr8.2:29869824-29869843 | None:intergenic | 25.0% |
| ! | AATCCTGCTATTAAATTTAG+AGG | + | chr8.2:29871017-29871036 | None:intergenic | 25.0% |
| ! | ATCATATTTCCCTTATGTTA+GGG | - | chr8.2:29871453-29871472 | MS.gene28875:CDS | 25.0% |
| ! | GATCTGGAAACAAATAAAAA+CGG | - | chr8.2:29872319-29872338 | MS.gene28875:CDS | 25.0% |
| ! | GTGAAAAAGTGAAAATCAAA+AGG | + | chr8.2:29871824-29871843 | None:intergenic | 25.0% |
| ! | GTTATCTACTAAACAAACAA+CGG | + | chr8.2:29871967-29871986 | None:intergenic | 25.0% |
| ! | TAGAAGAACAATCATAAAAG+AGG | + | chr8.2:29871673-29871692 | None:intergenic | 25.0% |
| ! | TGACATAATCAATTTATCGT+TGG | - | chr8.2:29871148-29871167 | MS.gene28875:CDS | 25.0% |
| !! | CTCCTTTATTTATCAAGTTA+GGG | - | chr8.2:29869877-29869896 | MS.gene28875:intron | 25.0% |
| !! | TTAATCAATATCTTTTACCC+TGG | - | chr8.2:29871192-29871211 | MS.gene28875:CDS | 25.0% |
| !!! | ATGCATTTTTTTTGTCTCTT+AGG | - | chr8.2:29871989-29872008 | MS.gene28875:intron | 25.0% |
| !!! | CTTTTGTCATTTTCTTTCAT+AGG | - | chr8.2:29871511-29871530 | MS.gene28875:CDS | 25.0% |
| !!! | TGTTTTGAGTGTTGATTTTA+GGG | - | chr8.2:29870067-29870086 | MS.gene28875:intron | 25.0% |
| !!! | TTCTGTTTTTGTTATGTTTG+TGG | - | chr8.2:29870025-29870044 | MS.gene28875:intron | 25.0% |
| !!! | TTGTTTTGAGTGTTGATTTT+AGG | - | chr8.2:29870066-29870085 | MS.gene28875:intron | 25.0% |
| !!! | TTTGTCATTTTCTTTCATAG+GGG | - | chr8.2:29871513-29871532 | MS.gene28875:CDS | 25.0% |
| CAACTCATCAGAAAACTTAT+CGG | - | chr8.2:29870164-29870183 | MS.gene28875:intron | 30.0% | |
| CGCAACTTCTTAAAACTTAA+GGG | - | chr8.2:29871545-29871564 | MS.gene28875:CDS | 30.0% | |
| GAATATCCAAAACATTGATC+TGG | - | chr8.2:29872303-29872322 | MS.gene28875:CDS | 30.0% | |
| GATCATATTTCCCTTATGTT+AGG | - | chr8.2:29871452-29871471 | MS.gene28875:CDS | 30.0% | |
| GCAACTTCTTAAAACTTAAG+GGG | - | chr8.2:29871546-29871565 | MS.gene28875:CDS | 30.0% | |
| GTTCCTCTAAATTTAATAGC+AGG | - | chr8.2:29871011-29871030 | MS.gene28875:intron | 30.0% | |
| TCATATTTCCCTTATGTTAG+GGG | - | chr8.2:29871454-29871473 | MS.gene28875:CDS | 30.0% | |
| TCGCAACTTCTTAAAACTTA+AGG | - | chr8.2:29871544-29871563 | MS.gene28875:CDS | 30.0% | |
| TGACAACATTCAGATTGTAT+TGG | - | chr8.2:29872025-29872044 | MS.gene28875:intron | 30.0% | |
| TTAACGGTAGAGACAATTAT+AGG | - | chr8.2:29870479-29870498 | MS.gene28875:intron | 30.0% | |
| TTCAGGTAACGTTTATCTAT+TGG | - | chr8.2:29870843-29870862 | MS.gene28875:intron | 30.0% | |
| ! | GCTCCTTTATTTATCAAGTT+AGG | - | chr8.2:29869876-29869895 | MS.gene28875:CDS | 30.0% |
| ! | GTTTCAAAAAGTTGCGATTT+TGG | - | chr8.2:29871310-29871329 | MS.gene28875:CDS | 30.0% |
| ! | TTGTTTCCAGATCAATGTTT+TGG | + | chr8.2:29872312-29872331 | None:intergenic | 30.0% |
| ! | TTTAGGGTGATAAAATAAGG+AGG | - | chr8.2:29872209-29872228 | MS.gene28875:CDS | 30.0% |
| !! | CAACTTTTTGAGAAGATAAG+GGG | - | chr8.2:29871423-29871442 | MS.gene28875:CDS | 30.0% |
| !! | GCAACTTTTTGAGAAGATAA+GGG | - | chr8.2:29871422-29871441 | MS.gene28875:CDS | 30.0% |
| !!! | GGTATTTTTTTCTCCTACTT+TGG | - | chr8.2:29869808-29869827 | MS.gene28875:intron | 30.0% |
| !!! | GTTTTAAGAAGTTGCGATTT+TGG | + | chr8.2:29871541-29871560 | None:intergenic | 30.0% |
| !!! | TCGCAACTTTTTGAAACTTA+CGG | + | chr8.2:29871307-29871326 | None:intergenic | 30.0% |
| !!! | TTGTCATTTTCTTTCATAGG+GGG | - | chr8.2:29871514-29871533 | MS.gene28875:CDS | 30.0% |
| AACAACAGATGAAGTACGAA+CGG | + | chr8.2:29872054-29872073 | None:intergenic | 35.0% | |
| AACAACGATCTTCAAATCCA+GGG | + | chr8.2:29871212-29871231 | None:intergenic | 35.0% | |
| ACAAACTGTGGAACAAATCT+TGG | + | chr8.2:29870508-29870527 | None:intergenic | 35.0% | |
| ACAAATAAAAACGGTGCATC+TGG | - | chr8.2:29872328-29872347 | MS.gene28875:CDS | 35.0% | |
| ACCAGATTGACTACTATTTC+AGG | - | chr8.2:29870826-29870845 | MS.gene28875:intron | 35.0% | |
| ACCTGAAATAGTAGTCAATC+TGG | + | chr8.2:29870830-29870849 | None:intergenic | 35.0% | |
| AGAGCATATTTCCCTAAACA+GGG | - | chr8.2:29871483-29871502 | MS.gene28875:CDS | 35.0% | |
| ATAAAATAAGGAGGCGGAAT+TGG | - | chr8.2:29872218-29872237 | MS.gene28875:CDS | 35.0% | |
| ATCACTGCAAAAGACAAGTT+GGG | + | chr8.2:29870937-29870956 | None:intergenic | 35.0% | |
| CAATCATAACTCTGCTCAAA+TGG | - | chr8.2:29870279-29870298 | MS.gene28875:intron | 35.0% | |
| CATATTTCCCTTATGTTAGG+GGG | - | chr8.2:29871455-29871474 | MS.gene28875:CDS | 35.0% | |
| CTAACGCTTCAAATGATGTA+TGG | - | chr8.2:29870696-29870715 | MS.gene28875:intron | 35.0% | |
| GAAAAAAATACCTGCGATTG+AGG | + | chr8.2:29869800-29869819 | None:intergenic | 35.0% | |
| TATCCATATGAGCCCATATA+AGG | + | chr8.2:29870592-29870611 | None:intergenic | 35.0% | |
| TCACAGTTTCATAACGTCAA+TGG | - | chr8.2:29872253-29872272 | MS.gene28875:CDS | 35.0% | |
| TTAGTATGCAACTCAGAATC+CGG | + | chr8.2:29870798-29870817 | None:intergenic | 35.0% | |
| TTGAGCAGAGTTATGATTGT+GGG | + | chr8.2:29870278-29870297 | None:intergenic | 35.0% | |
| TTTGAGCAGAGTTATGATTG+TGG | + | chr8.2:29870279-29870298 | None:intergenic | 35.0% | |
| ! | AAGAGCATATTTCCCTAAAC+AGG | - | chr8.2:29871482-29871501 | MS.gene28875:CDS | 35.0% |
| ! | CATACATCATTTGAAGCGTT+AGG | + | chr8.2:29870698-29870717 | None:intergenic | 35.0% |
| ! | CGATAAGTTTTCTGATGAGT+TGG | + | chr8.2:29870166-29870185 | None:intergenic | 35.0% |
| ! | GATTTGTTCCACAGTTTGTA+AGG | - | chr8.2:29870509-29870528 | MS.gene28875:intron | 35.0% |
| ! | TAGTATTGGGCATGATTAGT+AGG | + | chr8.2:29870544-29870563 | None:intergenic | 35.0% |
| !! | CGCAACTTTTTGAGAAGATA+AGG | - | chr8.2:29871421-29871440 | MS.gene28875:CDS | 35.0% |
| !!! | CGCAACTTTTTGAAACTTAC+GGG | + | chr8.2:29871306-29871325 | None:intergenic | 35.0% |
| !!! | TGCAATATTTTTTCCACCTC+CGG | - | chr8.2:29870776-29870795 | MS.gene28875:intron | 35.0% |
| !!! | TGTCATTTTCTTTCATAGGG+GGG | - | chr8.2:29871515-29871534 | MS.gene28875:CDS | 35.0% |
| AAGAGGAACATGGATGATCA+GGG | - | chr8.2:29870984-29871003 | MS.gene28875:intron | 40.0% | |
| AAGCAAGTTAAGGATACTGC+AGG | - | chr8.2:29870118-29870137 | MS.gene28875:intron | 40.0% | |
| AAGGTCGATAAATCCAAGGA+AGG | + | chr8.2:29869776-29869795 | None:intergenic | 40.0% | |
| AATTCAAACGCGTCTTCCAA+TGG | - | chr8.2:29870193-29870212 | MS.gene28875:intron | 40.0% | |
| AGCATATTTCCCTAAACAGG+GGG | - | chr8.2:29871485-29871504 | MS.gene28875:CDS | 40.0% | |
| AGGGTGATAAAATAAGGAGG+CGG | - | chr8.2:29872212-29872231 | MS.gene28875:CDS | 40.0% | |
| ATGGGCTCATATGGATATCA+TGG | - | chr8.2:29870595-29870614 | MS.gene28875:intron | 40.0% | |
| CAACAACGATCTTCAAATCC+AGG | + | chr8.2:29871213-29871232 | None:intergenic | 40.0% | |
| CACATACTTGAAGAGGAACA+TGG | - | chr8.2:29870974-29870993 | MS.gene28875:intron | 40.0% | |
| CATATGAGCCCATATAAGGT+GGG | + | chr8.2:29870588-29870607 | None:intergenic | 40.0% | |
| GAGCATATTTCCCTAAACAG+GGG | - | chr8.2:29871484-29871503 | MS.gene28875:CDS | 40.0% | |
| GATCACTGCAAAAGACAAGT+TGG | + | chr8.2:29870938-29870957 | None:intergenic | 40.0% | |
| GTCTGCTTCCAGAGTTAAAA+TGG | + | chr8.2:29870411-29870430 | None:intergenic | 40.0% | |
| TATTGGGCATGATTAGTAGG+CGG | + | chr8.2:29870541-29870560 | None:intergenic | 40.0% | |
| TCACTGCAAAAGACAAGTTG+GGG | + | chr8.2:29870936-29870955 | None:intergenic | 40.0% | |
| TGGAGAATATTGTTCGGATG+AGG | - | chr8.2:29872402-29872421 | MS.gene28875:CDS | 40.0% | |
| TTCATCTGTTGTTGAAGTGC+AGG | - | chr8.2:29872061-29872080 | MS.gene28875:intron | 40.0% | |
| ! | CTTTTGACCCCCTAACATAA+GGG | + | chr8.2:29871465-29871484 | None:intergenic | 40.0% |
| ! | GAAGATATCGGTTGCACAAA+CGG | + | chr8.2:29870756-29870775 | None:intergenic | 40.0% |
| ! | TCTTTTGACCCCCTAACATA+AGG | + | chr8.2:29871466-29871485 | None:intergenic | 40.0% |
| !! | GTATCCTTAACTTGCTTCTG+AGG | + | chr8.2:29870115-29870134 | None:intergenic | 40.0% |
| !!! | GAGTGTTGATTTTAGGGTAC+TGG | - | chr8.2:29870073-29870092 | MS.gene28875:intron | 40.0% |
| !!! | GGTTCTCACCATTTTAACTC+TGG | - | chr8.2:29870400-29870419 | MS.gene28875:intron | 40.0% |
| !!! | TCAGCAATTTTGGGACGAAA+GGG | + | chr8.2:29871366-29871385 | None:intergenic | 40.0% |
| AAATACCTGCGATTGAGGCA+AGG | + | chr8.2:29869795-29869814 | None:intergenic | 45.0% | |
| AATTCATCCAGGAACCGGAA+TGG | - | chr8.2:29870352-29870371 | MS.gene28875:intron | 45.0% | |
| ACAAAAGTGACCCCCTGTTT+AGG | + | chr8.2:29871498-29871517 | None:intergenic | 45.0% | |
| ACCACCAATCCCACCTTATA+TGG | - | chr8.2:29870576-29870595 | MS.gene28875:intron | 45.0% | |
| AGGCAAGGTCGATAAATCCA+AGG | + | chr8.2:29869780-29869799 | None:intergenic | 45.0% | |
| ATGGAACATCTACCAAGAGC+TGG | - | chr8.2:29870298-29870317 | MS.gene28875:intron | 45.0% | |
| CAAAAGTGACCCCCTGTTTA+GGG | + | chr8.2:29871497-29871516 | None:intergenic | 45.0% | |
| CCACCAATCCCACCTTATAT+GGG | - | chr8.2:29870577-29870596 | MS.gene28875:intron | 45.0% | |
| CCACCTTATATGGGCTCATA+TGG | - | chr8.2:29870586-29870605 | MS.gene28875:intron | 45.0% | |
| CCATATGAGCCCATATAAGG+TGG | + | chr8.2:29870589-29870608 | None:intergenic | 45.0% | |
| CTCTCCTCAGAAGCAAGTTA+AGG | - | chr8.2:29870108-29870127 | MS.gene28875:intron | 45.0% | |
| GAAGACATCGACAACACTTC+CGG | - | chr8.2:29869602-29869621 | MS.gene28875:intron | 45.0% | |
| GAAGAGGAACATGGATGATC+AGG | - | chr8.2:29870983-29871002 | MS.gene28875:intron | 45.0% | |
| GAAGGTTTCACCAATTCCTG+TGG | + | chr8.2:29869758-29869777 | None:intergenic | 45.0% | |
| GAATATTGTTCGGATGAGGC+AGG | - | chr8.2:29872406-29872425 | MS.gene28875:CDS | 45.0% | |
| GCAACGACACATACTTGAAG+AGG | - | chr8.2:29870967-29870986 | MS.gene28875:intron | 45.0% | |
| GGAATTGGTGAAACCTTCCT+TGG | - | chr8.2:29869760-29869779 | MS.gene28875:intron | 45.0% | |
| TCCGGTTCCTGGATGAATTT+CGG | + | chr8.2:29870351-29870370 | None:intergenic | 45.0% | |
| TGCACAAACGGTACACTTCT+CGG | + | chr8.2:29870744-29870763 | None:intergenic | 45.0% | |
| TTGGAGGGTTTACTCCAAAC+AGG | + | chr8.2:29869638-29869657 | None:intergenic | 45.0% | |
| ! | ATATAAGGTGGGATTGGTGG+TGG | + | chr8.2:29870577-29870596 | None:intergenic | 45.0% |
| ! | GGCGTCTTCTCAGCAATTTT+GGG | + | chr8.2:29871375-29871394 | None:intergenic | 45.0% |
| ! | TGGCGTCTTCTCAGCAATTT+TGG | + | chr8.2:29871376-29871395 | None:intergenic | 45.0% |
| !! | TTGGCGGATTCAGATAAAGC+AGG | + | chr8.2:29869698-29869717 | None:intergenic | 45.0% |
| !!! | CAGCAATTTTGGGACGAAAG+GGG | + | chr8.2:29871365-29871384 | None:intergenic | 45.0% |
| !!! | CTCAGCAATTTTGGGACGAA+AGG | + | chr8.2:29871367-29871386 | None:intergenic | 45.0% |
| !!! | GCGACTATGACCCCTTTTTT+GGG | + | chr8.2:29871404-29871423 | None:intergenic | 45.0% |
| !!! | TGCGACTATGACCCCTTTTT+TGG | + | chr8.2:29871405-29871424 | None:intergenic | 45.0% |
| !!! | AAATTGTAATTTTTTTAAAT+AGG | + | chr8.2:29871339-29871358 | None:intergenic | 5.0% |
| !!! | AATTGTAATTTTTTTAAATA+GGG | + | chr8.2:29871338-29871357 | None:intergenic | 5.0% |
| !!! | ATTTAAAAAAATTACAATTT+TGG | - | chr8.2:29871339-29871358 | MS.gene28875:CDS | 5.0% |
| ACAAACGGTACACTTCTCGG+AGG | + | chr8.2:29870741-29870760 | None:intergenic | 50.0% | |
| ACGCCACGTGTCCCAAAAAA+GGG | - | chr8.2:29871390-29871409 | MS.gene28875:CDS | 50.0% | |
| ATCTGAATCCGCCAAAGCTC+CGG | - | chr8.2:29869703-29869722 | MS.gene28875:intron | 50.0% | |
| CATTCCAGTCCTGATTTCCG+CGG | + | chr8.2:29870444-29870463 | None:intergenic | 50.0% | |
| CCAAACAGGTCTCTTACCAC+CGG | + | chr8.2:29869624-29869643 | None:intergenic | 50.0% | |
| CCCATATAAGGTGGGATTGG+TGG | + | chr8.2:29870580-29870599 | None:intergenic | 50.0% | |
| GAACATGGATGATCAGGGCT+GGG | - | chr8.2:29870989-29871008 | MS.gene28875:intron | 50.0% | |
| GAGCCCATATAAGGTGGGAT+TGG | + | chr8.2:29870583-29870602 | None:intergenic | 50.0% | |
| GAGTTATGATTGTGGGACCC+TGG | + | chr8.2:29870271-29870290 | None:intergenic | 50.0% | |
| GCCGAAATTCATCCAGGAAC+CGG | - | chr8.2:29870347-29870366 | MS.gene28875:intron | 50.0% | |
| GGTTTCACCAATTCCTGTGG+TGG | + | chr8.2:29869755-29869774 | None:intergenic | 50.0% | |
| GTATGCAACTCAGAATCCGG+AGG | + | chr8.2:29870795-29870814 | None:intergenic | 50.0% | |
| GTATGGTCCACCTTTGCATG+TGG | - | chr8.2:29870713-29870732 | MS.gene28875:intron | 50.0% | |
| TATGATTGTGGGACCCTGGT+GGG | + | chr8.2:29870267-29870286 | None:intergenic | 50.0% | |
| TCAAACGCGTCTTCCAATGG+AGG | - | chr8.2:29870196-29870215 | MS.gene28875:intron | 50.0% | |
| TGACGGCGATGAATGAGGTA+CGG | + | chr8.2:29869528-29869547 | None:intergenic | 50.0% | |
| TTATGATTGTGGGACCCTGG+TGG | + | chr8.2:29870268-29870287 | None:intergenic | 50.0% | |
| TTGGGCACAAATCCAGCTCT+TGG | + | chr8.2:29870313-29870332 | None:intergenic | 50.0% | |
| ! | AACAATCTGGCTCCAAGGTG+CGG | + | chr8.2:29869486-29869505 | None:intergenic | 50.0% |
| ! | ACCAATTCCTGTGGTGGTGA+TGG | + | chr8.2:29869749-29869768 | None:intergenic | 50.0% |
| ! | CTCCAATGCTGCTGCTTCTT+CGG | - | chr8.2:29869652-29869671 | MS.gene28875:intron | 50.0% |
| ! | GAAGAAGCAGCAGCATTGGA+GGG | + | chr8.2:29869653-29869672 | None:intergenic | 50.0% |
| !! | AATTCCTGTGGTGGTGATGG+CGG | + | chr8.2:29869746-29869765 | None:intergenic | 50.0% |
| ATCGACCTTGCCTCAATCGC+AGG | - | chr8.2:29869787-29869806 | MS.gene28875:intron | 55.0% | |
| CCACAAATGTCTGCGCCTCA+AGG | - | chr8.2:29870229-29870248 | MS.gene28875:intron | 55.0% | |
| CCGGTGGTAAGAGACCTGTT+TGG | - | chr8.2:29869621-29869640 | MS.gene28875:intron | 55.0% | |
| CCTTGAGGCGCAGACATTTG+TGG | + | chr8.2:29870232-29870251 | None:intergenic | 55.0% | |
| CGCCACGTGTCCCAAAAAAG+GGG | - | chr8.2:29871391-29871410 | MS.gene28875:CDS | 55.0% | |
| CTGGATGAATTTCGGCGCTG+AGG | + | chr8.2:29870343-29870362 | None:intergenic | 55.0% | |
| GACATCGACAACACTTCCGG+TGG | - | chr8.2:29869605-29869624 | MS.gene28875:intron | 55.0% | |
| GACCGAAGAAGCAGCAGCAT+TGG | + | chr8.2:29869657-29869676 | None:intergenic | 55.0% | |
| GACGCCACGTGTCCCAAAAA+AGG | - | chr8.2:29871389-29871408 | MS.gene28875:CDS | 55.0% | |
| GCATGATTAGTAGGCGGTGG+AGG | + | chr8.2:29870535-29870554 | None:intergenic | 55.0% | |
| GCCATCACCACCACAGGAAT+TGG | - | chr8.2:29869745-29869764 | MS.gene28875:intron | 55.0% | |
| GGAACATGGATGATCAGGGC+TGG | - | chr8.2:29870988-29871007 | MS.gene28875:intron | 55.0% | |
| GGGACAGCAACGAAACCTTG+AGG | + | chr8.2:29870247-29870266 | None:intergenic | 55.0% | |
| GGTGGAGGCCTTACAAACTG+TGG | + | chr8.2:29870520-29870539 | None:intergenic | 55.0% | |
| GTTGTAGACCACCGCCATTC+CGG | + | chr8.2:29870369-29870388 | None:intergenic | 55.0% | |
| GTTTCGTTGCTGTCCCACCA+GGG | - | chr8.2:29870251-29870270 | MS.gene28875:intron | 55.0% | |
| TCATCCAGGAACCGGAATGG+CGG | - | chr8.2:29870355-29870374 | MS.gene28875:intron | 55.0% | |
| TGAGGCGCAGACATTTGTGG+CGG | + | chr8.2:29870229-29870248 | None:intergenic | 55.0% | |
| TGATCAGGACCGCGGAAATC+AGG | - | chr8.2:29870432-29870451 | MS.gene28875:intron | 55.0% | |
| TGCAACTCAGAATCCGGAGG+TGG | + | chr8.2:29870792-29870811 | None:intergenic | 55.0% | |
| TGGGCATGATTAGTAGGCGG+TGG | + | chr8.2:29870538-29870557 | None:intergenic | 55.0% | |
| TGTTCGGATGAGGCAGGAAG+CGG | - | chr8.2:29872412-29872431 | MS.gene28875:CDS | 55.0% | |
| ! | CGAAGAAGCAGCAGCATTGG+AGG | + | chr8.2:29869654-29869673 | None:intergenic | 55.0% |
| ! | CTCAGCGCCGAAATTCATCC+AGG | - | chr8.2:29870341-29870360 | MS.gene28875:intron | 55.0% |
| ! | CTCTGGAAGCAGACGTGATC+AGG | - | chr8.2:29870417-29870436 | MS.gene28875:intron | 55.0% |
| ! | GAGGCAACAATCTGGCTCCA+AGG | + | chr8.2:29869491-29869510 | None:intergenic | 55.0% |
| ! | TGCTGCTGCTTCTTCGGTCA+TGG | - | chr8.2:29869658-29869677 | MS.gene28875:intron | 55.0% |
| !! | CGGTCATGGATGCTGACTCA+TGG | - | chr8.2:29869672-29869691 | MS.gene28875:intron | 55.0% |
| !! | TAAGGTGGGATTGGTGGTGG+TGG | + | chr8.2:29870574-29870593 | None:intergenic | 55.0% |
| !! | TGGTGGCGGGGGATAGTATT+GGG | + | chr8.2:29870557-29870576 | None:intergenic | 55.0% |
| !!! | GACCCCTTTTTTGGGACACG+TGG | + | chr8.2:29871396-29871415 | None:intergenic | 55.0% |
| AGCAGACGTGATCAGGACCG+CGG | - | chr8.2:29870424-29870443 | MS.gene28875:intron | 60.0% | |
| AGGACCGCGGAAATCAGGAC+TGG | - | chr8.2:29870437-29870456 | MS.gene28875:intron | 60.0% | |
| ATGAGGTACGGCGGAAGCAG+CGG | + | chr8.2:29869516-29869535 | None:intergenic | 60.0% | |
| CACTTTCGCCGTCACTGAGG+CGG | - | chr8.2:29869577-29869596 | MS.gene28875:intron | 60.0% | |
| CAGACATTTGTGGCGGCTGG+CGG | + | chr8.2:29870222-29870241 | None:intergenic | 60.0% | |
| CAGCGGTGGAGGCAACAATC+TGG | + | chr8.2:29869499-29869518 | None:intergenic | 60.0% | |
| CGACACTTTCGCCGTCACTG+AGG | - | chr8.2:29869574-29869593 | MS.gene28875:intron | 60.0% | |
| CGGCGATGAATGAGGTACGG+CGG | + | chr8.2:29869525-29869544 | None:intergenic | 60.0% | |
| CTCGGAGGCTCCACATGCAA+AGG | + | chr8.2:29870726-29870745 | None:intergenic | 60.0% | |
| GAGGAAGGAGGAGGAGGTGA+CGG | + | chr8.2:29869545-29869564 | None:intergenic | 60.0% | |
| GGAGGCTCCACATGCAAAGG+TGG | + | chr8.2:29870723-29870742 | None:intergenic | 60.0% | |
| GGTCTACAACCACGCGGAGA+TGG | - | chr8.2:29870379-29870398 | MS.gene28875:intron | 60.0% | |
| GGTTTCGTTGCTGTCCCACC+AGG | - | chr8.2:29870250-29870269 | MS.gene28875:intron | 60.0% | |
| GTTCGGATGAGGCAGGAAGC+GGG | - | chr8.2:29872413-29872432 | MS.gene28875:CDS | 60.0% | |
| TGGCGATTTCGCCGGAGCTT+TGG | + | chr8.2:29869717-29869736 | None:intergenic | 60.0% | |
| TGGTGAGAACCATCTCCGCG+TGG | + | chr8.2:29870391-29870410 | None:intergenic | 60.0% | |
| ! | AATCTGGCTCCAAGGTGCGG+CGG | + | chr8.2:29869483-29869502 | None:intergenic | 60.0% |
| ! | CGATTTCGCCGGAGCTTTGG+CGG | + | chr8.2:29869714-29869733 | None:intergenic | 60.0% |
| ! | CGGCGCTGAGGCTGATCATT+GGG | + | chr8.2:29870331-29870350 | None:intergenic | 60.0% |
| ! | GGAGGTGACGGCGATGAATG+AGG | + | chr8.2:29869533-29869552 | None:intergenic | 60.0% |
| ! | TCGGCGCTGAGGCTGATCAT+TGG | + | chr8.2:29870332-29870351 | None:intergenic | 60.0% |
| !! | GACGGCGAAAGTGTCGACAG+CGG | + | chr8.2:29869570-29869589 | None:intergenic | 60.0% |
| !! | GTGGTGGCGGGGGATAGTAT+TGG | + | chr8.2:29870558-29870577 | None:intergenic | 60.0% |
| ACCACCGCCATCACCACCAC+AGG | - | chr8.2:29869739-29869758 | MS.gene28875:intron | 65.0% | |
| ACCACCGCCATTCCGGTTCC+TGG | + | chr8.2:29870362-29870381 | None:intergenic | 65.0% | |
| GCGCAGACATTTGTGGCGGC+TGG | + | chr8.2:29870225-29870244 | None:intergenic | 65.0% | |
| GGCGGTGGTCTACAACCACG+CGG | - | chr8.2:29870373-29870392 | MS.gene28875:intron | 65.0% | |
| GTCTTCCGCCGCCTCAGTGA+CGG | + | chr8.2:29869588-29869607 | None:intergenic | 65.0% | |
| TCCAGGAACCGGAATGGCGG+TGG | - | chr8.2:29870358-29870377 | MS.gene28875:intron | 65.0% | |
| TTTCGCCGTCACTGAGGCGG+CGG | - | chr8.2:29869580-29869599 | MS.gene28875:intron | 65.0% | |
| !! | GAAAGTGTCGACAGCGGCGG+AGG | + | chr8.2:29869564-29869583 | None:intergenic | 65.0% |
| !! | GGCGAAAGTGTCGACAGCGG+CGG | + | chr8.2:29869567-29869586 | None:intergenic | 65.0% |
| !! | GGCGGGAGAGGAAGCGTTCA+TGG | + | chr8.2:29869462-29869481 | None:intergenic | 65.0% |
| !! | GGTGGGATTGGTGGTGGTGG+CGG | + | chr8.2:29870571-29870590 | None:intergenic | 65.0% |
| !! | GGTGGTGGTGGCGATTTCGC+CGG | + | chr8.2:29869725-29869744 | None:intergenic | 65.0% |
| !! | GTGGGATTGGTGGTGGTGGC+GGG | + | chr8.2:29870570-29870589 | None:intergenic | 65.0% |
| !! | TCCTGTGGTGGTGATGGCGG+TGG | + | chr8.2:29869743-29869762 | None:intergenic | 65.0% |
| !! | TGGGATTGGTGGTGGTGGCG+GGG | + | chr8.2:29870569-29870588 | None:intergenic | 65.0% |
| !! | TGTGGTGGTGATGGCGGTGG+TGG | + | chr8.2:29869740-29869759 | None:intergenic | 65.0% |
| ACAGCGGCGGAGGAAGGAGG+AGG | + | chr8.2:29869554-29869573 | None:intergenic | 70.0% | |
| AGGTACGGCGGAAGCAGCGG+TGG | + | chr8.2:29869513-29869532 | None:intergenic | 70.0% | |
| TACGGCGGAAGCAGCGGTGG+AGG | + | chr8.2:29869510-29869529 | None:intergenic | 70.0% | |
| TCGACAGCGGCGGAGGAAGG+AGG | + | chr8.2:29869557-29869576 | None:intergenic | 70.0% | |
| ! | GTGTCGACAGCGGCGGAGGA+AGG | + | chr8.2:29869560-29869579 | None:intergenic | 70.0% |
| !! | GGGATTGGTGGTGGTGGCGG+GGG | + | chr8.2:29870568-29870587 | None:intergenic | 70.0% |
| !! | GGTGGTGATGGCGGTGGTGG+TGG | + | chr8.2:29869737-29869756 | None:intergenic | 70.0% |
| CTGGCTCCAAGGTGCGGCGG+CGG | + | chr8.2:29869480-29869499 | None:intergenic | 75.0% | |
| GCGGCGGAGGAAGGAGGAGG+AGG | + | chr8.2:29869551-29869570 | None:intergenic | 75.0% | |
| TGGCGGCTGGCGGCCTCCAT+TGG | + | chr8.2:29870212-29870231 | None:intergenic | 75.0% | |
| TGGCTCCAAGGTGCGGCGGC+GGG | + | chr8.2:29869479-29869498 | None:intergenic | 75.0% | |
| ! | CCAAGGTGCGGCGGCGGGAG+AGG | + | chr8.2:29869474-29869493 | None:intergenic | 80.0% |
| ! | CCTCTCCCGCCGCCGCACCT+TGG | - | chr8.2:29869471-29869490 | MS.gene28875:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 29869455 | 29872451 | 29869455 | ID=MS.gene28875 |
| chr8.2 | mRNA | 29869455 | 29872451 | 29869455 | ID=MS.gene28875.t1;Parent=MS.gene28875 |
| chr8.2 | exon | 29872098 | 29872451 | 29872098 | ID=MS.gene28875.t1.exon1;Parent=MS.gene28875.t1 |
| chr8.2 | CDS | 29872098 | 29872451 | 29872098 | ID=cds.MS.gene28875.t1;Parent=MS.gene28875.t1 |
| chr8.2 | exon | 29871290 | 29871818 | 29871290 | ID=MS.gene28875.t1.exon2;Parent=MS.gene28875.t1 |
| chr8.2 | CDS | 29871290 | 29871818 | 29871290 | ID=cds.MS.gene28875.t1;Parent=MS.gene28875.t1 |
| chr8.2 | exon | 29871059 | 29871212 | 29871059 | ID=MS.gene28875.t1.exon3;Parent=MS.gene28875.t1 |
| chr8.2 | CDS | 29871059 | 29871212 | 29871059 | ID=cds.MS.gene28875.t1;Parent=MS.gene28875.t1 |
| chr8.2 | exon | 29870863 | 29870953 | 29870863 | ID=MS.gene28875.t1.exon4;Parent=MS.gene28875.t1 |
| chr8.2 | CDS | 29870863 | 29870953 | 29870863 | ID=cds.MS.gene28875.t1;Parent=MS.gene28875.t1 |
| chr8.2 | exon | 29869824 | 29869895 | 29869824 | ID=MS.gene28875.t1.exon5;Parent=MS.gene28875.t1 |
| chr8.2 | CDS | 29869824 | 29869895 | 29869824 | ID=cds.MS.gene28875.t1;Parent=MS.gene28875.t1 |
| chr8.2 | exon | 29869455 | 29869478 | 29869455 | ID=MS.gene28875.t1.exon6;Parent=MS.gene28875.t1 |
| chr8.2 | CDS | 29869455 | 29869478 | 29869455 | ID=cds.MS.gene28875.t1;Parent=MS.gene28875.t1 |
| Gene Sequence |
| Protein sequence |
