Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29077.t1 | XP_013460978.1 | 99.3 | 706 | 5 | 0 | 1 | 706 | 1 | 706 | 0.00E+00 | 1404.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29077.t1 | Q9SS87 | 40.4 | 721 | 403 | 9 | 4 | 704 | 14 | 727 | 5.0e-152 | 539.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29077.t1 | A0A072UZM7 | 99.3 | 706 | 5 | 0 | 1 | 706 | 1 | 706 | 0.0e+00 | 1404.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049698 | MS.gene29077 | 0.801033 | 1.09E-48 | -1.69E-46 |
| MS.gene054118 | MS.gene29077 | 0.850478 | 1.65E-60 | -1.69E-46 |
| MS.gene058909 | MS.gene29077 | 0.852569 | 4.24E-61 | -1.69E-46 |
| MS.gene058912 | MS.gene29077 | 0.85159 | 8.04E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29077.t1 | MTR_3g075450 | 99.292 | 706 | 5 | 0 | 1 | 706 | 1 | 706 | 0.0 | 1461 |
| MS.gene29077.t1 | MTR_8g089660 | 52.422 | 702 | 320 | 8 | 15 | 706 | 7 | 704 | 0.0 | 746 |
| MS.gene29077.t1 | MTR_7g032660 | 45.364 | 701 | 367 | 11 | 17 | 704 | 12 | 709 | 0.0 | 602 |
| MS.gene29077.t1 | MTR_1g074950 | 32.413 | 688 | 405 | 17 | 27 | 704 | 24 | 661 | 1.62e-107 | 341 |
| MS.gene29077.t1 | MTR_1g075230 | 33.578 | 682 | 400 | 21 | 30 | 704 | 26 | 661 | 2.38e-104 | 333 |
| MS.gene29077.t1 | MTR_1g074990 | 31.095 | 685 | 417 | 19 | 27 | 704 | 23 | 659 | 2.39e-102 | 328 |
| MS.gene29077.t1 | MTR_1g075095 | 31.304 | 690 | 411 | 22 | 27 | 704 | 23 | 661 | 1.37e-100 | 323 |
| MS.gene29077.t1 | MTR_1g075030 | 31.014 | 690 | 413 | 21 | 27 | 704 | 23 | 661 | 2.18e-99 | 320 |
| MS.gene29077.t1 | MTR_1g040360 | 28.161 | 696 | 429 | 22 | 30 | 704 | 31 | 676 | 1.03e-76 | 260 |
| MS.gene29077.t1 | MTR_1g075153 | 25.648 | 694 | 425 | 24 | 30 | 704 | 40 | 661 | 2.51e-56 | 204 |
| MS.gene29077.t1 | MTR_1g075170 | 25.634 | 710 | 414 | 26 | 29 | 704 | 36 | 665 | 3.37e-53 | 195 |
| MS.gene29077.t1 | MTR_1g075180 | 26.174 | 703 | 408 | 26 | 29 | 704 | 16 | 634 | 6.62e-49 | 182 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29077.t1 | AT3G01680 | 40.443 | 722 | 401 | 11 | 4 | 704 | 14 | 727 | 0.0 | 553 |
| MS.gene29077.t1 | AT3G01670 | 36.908 | 718 | 400 | 11 | 19 | 706 | 128 | 822 | 8.22e-153 | 464 |
| MS.gene29077.t1 | AT3G01670 | 36.908 | 718 | 400 | 11 | 19 | 706 | 152 | 846 | 1.47e-152 | 464 |
| MS.gene29077.t1 | AT1G67790 | 29.529 | 701 | 434 | 21 | 22 | 702 | 4 | 664 | 6.09e-96 | 311 |
Find 130 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATGGATTTGGGGAAATT+TGG | 0.167832 | 3.4:-73872419 | MS.gene29077:CDS |
| TCAAGATTTCATCAACAATT+TGG | 0.168351 | 3.4:+73874849 | None:intergenic |
| TGACATCAATTTGGTTCTTT+TGG | 0.182104 | 3.4:-73871964 | MS.gene29077:CDS |
| TGGCATTGATCCTGCACTTT+TGG | 0.203402 | 3.4:-73872323 | MS.gene29077:CDS |
| CAATGTCAGGTAGTTGTTTA+AGG | 0.208483 | 3.4:+73873704 | None:intergenic |
| TAGATGGAACTACAAAATTA+AGG | 0.217891 | 3.4:-73872912 | MS.gene29077:CDS |
| AGCATTGAATGATTATATTA+AGG | 0.248515 | 3.4:-73871708 | MS.gene29077:CDS |
| CTCTTCACATGATATGGATT+TGG | 0.257673 | 3.4:-73872429 | MS.gene29077:CDS |
| TTCCAAACGTGACATCAATT+TGG | 0.261192 | 3.4:-73871973 | MS.gene29077:CDS |
| TCTTCACATGATATGGATTT+GGG | 0.286072 | 3.4:-73872428 | MS.gene29077:CDS |
| ATATTCCTATTGCTACCTAT+TGG | 0.303164 | 3.4:-73873528 | MS.gene29077:CDS |
| TATTGAGGCATTTCTCTATC+TGG | 0.308636 | 3.4:-73873019 | MS.gene29077:CDS |
| TGTAATAGGCTTATTCTTCC+TGG | 0.311032 | 3.4:-73871665 | MS.gene29077:CDS |
| AAAACGCTCTTCACATGATA+TGG | 0.318513 | 3.4:-73872435 | MS.gene29077:CDS |
| TATTCCTATTGCTACCTATT+GGG | 0.336914 | 3.4:-73873527 | MS.gene29077:CDS |
| AGCAACCACATCATTGTAAT+AGG | 0.338223 | 3.4:-73871679 | MS.gene29077:CDS |
| CATGTTGCTTTGTCCACAAC+TGG | 0.342091 | 3.4:+73872631 | None:intergenic |
| CATGTGCATTGTTGAATTCA+AGG | 0.348701 | 3.4:-73873608 | MS.gene29077:CDS |
| AGCCTTGAGTTGCTTGTTGA+TGG | 0.355975 | 3.4:-73872343 | MS.gene29077:CDS |
| ATATCATGTGAAGAGCGTTT+TGG | 0.362314 | 3.4:+73872437 | None:intergenic |
| TCACAAATTGCAAGTCTCAT+AGG | 0.363224 | 3.4:-73873478 | MS.gene29077:CDS |
| AACCAAATTGATGTCACGTT+TGG | 0.365900 | 3.4:+73871971 | None:intergenic |
| TGTTAGAAGCAGCTGATAAC+TGG | 0.369862 | 3.4:+73874990 | None:intergenic |
| AGATGGAACTACAAAATTAA+GGG | 0.376780 | 3.4:-73872911 | MS.gene29077:intron |
| CCTTGTGGAAGCAAGAGATT+TGG | 0.382186 | 3.4:-73872366 | MS.gene29077:CDS |
| CTTATTCTTCCTGGGAGTAC+TGG | 0.385929 | 3.4:-73871656 | MS.gene29077:CDS |
| TCTTCTTTCTCACTTGTGAA+TGG | 0.389160 | 3.4:+73872391 | None:intergenic |
| GCTCTTTGCTACCAAGCTAT+AGG | 0.395639 | 3.4:-73873233 | MS.gene29077:intron |
| ATTGGAAACTACTGCTGCTT+TGG | 0.396203 | 3.4:-73874453 | MS.gene29077:CDS |
| ACTGAATTTCTTGTTGTTGA+AGG | 0.404691 | 3.4:+73872003 | None:intergenic |
| TCATCAACAATTTGGATAAG+TGG | 0.405497 | 3.4:+73874857 | None:intergenic |
| TTTAAGGAGAGCCACAGATT+TGG | 0.410648 | 3.4:+73873720 | None:intergenic |
| AGTGACTTTGTGAGCAAGAC+TGG | 0.411930 | 3.4:+73873286 | None:intergenic |
| CATGCCATGGATAGCTAGAT+AGG | 0.425221 | 3.4:+73873830 | None:intergenic |
| ACATCGATTTCACGACCATC+AGG | 0.425726 | 3.4:+73874884 | None:intergenic |
| ATGACCCAATAGGTAGCAAT+AGG | 0.437496 | 3.4:+73873523 | None:intergenic |
| CTGTAGAGGACCATCTGAAA+TGG | 0.452637 | 3.4:-73871816 | MS.gene29077:CDS |
| GTAATAGGCTTATTCTTCCT+GGG | 0.465122 | 3.4:-73871664 | MS.gene29077:CDS |
| TAGGATTGAACAAGATGGTT+GGG | 0.467822 | 3.4:-73871735 | MS.gene29077:CDS |
| TGCTGAATGTGGTCGTCAAA+TGG | 0.468093 | 3.4:-73871609 | MS.gene29077:CDS |
| ACAGAATTCTCTACAATGTC+AGG | 0.472954 | 3.4:+73873691 | None:intergenic |
| CAGCTATCATGCAAATGCTC+TGG | 0.476086 | 3.4:-73873895 | MS.gene29077:CDS |
| TTAATATAATCATTCAATGC+TGG | 0.481704 | 3.4:+73871710 | None:intergenic |
| TCTGAAATGGCTAGGGCTAA+AGG | 0.482330 | 3.4:-73871803 | MS.gene29077:CDS |
| CGACGGTAGTGACCGAGGTT+GGG | 0.484160 | 3.4:-73871846 | MS.gene29077:CDS |
| AATACTTCTGATGACCCAAT+AGG | 0.487922 | 3.4:+73873513 | None:intergenic |
| ATTCGATATGCTTGATGCGC+TGG | 0.489847 | 3.4:-73874426 | MS.gene29077:CDS |
| TTTGTAGTTCCATCTATAAG+TGG | 0.489901 | 3.4:+73872919 | None:intergenic |
| ATCATTGCTCGAAGTGTTGA+GGG | 0.490421 | 3.4:-73874821 | MS.gene29077:CDS |
| TATACAAAGATGCTAGATCA+AGG | 0.490563 | 3.4:-73872684 | MS.gene29077:CDS |
| TTGATATACTTAATCACTGA+TGG | 0.491113 | 3.4:+73872526 | None:intergenic |
| CACAAATTGCAAGTCTCATA+GGG | 0.500466 | 3.4:-73873477 | MS.gene29077:CDS |
| TCCTTGTTGTAGATGACAGA+AGG | 0.509373 | 3.4:-73872181 | MS.gene29077:intron |
| AGACACACTATGAGATGGTA+TGG | 0.509954 | 3.4:-73872657 | MS.gene29077:CDS |
| TAACAGAATGCAGCTAAAGA+AGG | 0.515235 | 3.4:-73874972 | MS.gene29077:CDS |
| TGGGAGGACAATCTTCCTTG+TGG | 0.515611 | 3.4:+73872457 | None:intergenic |
| ATCGTCCTTTGCATAAATCA+AGG | 0.519868 | 3.4:+73872948 | None:intergenic |
| ACTGATGGTTCAATAATGAA+AGG | 0.522705 | 3.4:+73872541 | None:intergenic |
| TCATGCAAATGCTCTGGAGG+TGG | 0.523089 | 3.4:-73873889 | MS.gene29077:CDS |
| AATAACAGCAAATGCTGCTA+AGG | 0.524767 | 3.4:+73873792 | None:intergenic |
| GAGAGCCTTGATTTATGCAA+AGG | 0.526390 | 3.4:-73872953 | MS.gene29077:CDS |
| GAGGACCATCTGAAATGGCT+AGG | 0.526776 | 3.4:-73871811 | MS.gene29077:CDS |
| TTGTAGTTCCATCTATAAGT+GGG | 0.528941 | 3.4:+73872920 | None:intergenic |
| ATTCTTCCTGGGAGTACTGG+TGG | 0.530375 | 3.4:-73871653 | MS.gene29077:CDS |
| AATCATTGCTCGAAGTGTTG+AGG | 0.530438 | 3.4:-73874822 | MS.gene29077:CDS |
| CAGTCCACTCATGCCCCTGA+TGG | 0.532299 | 3.4:-73874899 | MS.gene29077:CDS |
| AGGTTAGTCTTGAAGTACTA+AGG | 0.533267 | 3.4:-73872777 | MS.gene29077:CDS |
| GAGTTAGAGATGGTCTATGT+AGG | 0.535445 | 3.4:-73872067 | MS.gene29077:CDS |
| TCGACGGTAGTGACCGAGGT+TGG | 0.542386 | 3.4:-73871847 | MS.gene29077:CDS |
| TTTCATCAGCCTCAGAAGCA+TGG | 0.544045 | 3.4:-73873316 | MS.gene29077:CDS |
| CTGATGGTTCAATAATGAAA+GGG | 0.546133 | 3.4:+73872542 | None:intergenic |
| TTCATCAGCCTCAGAAGCAT+GGG | 0.546942 | 3.4:-73873315 | MS.gene29077:CDS |
| TGAGCACTTGCAACAGACAT+AGG | 0.550601 | 3.4:+73873550 | None:intergenic |
| GGACTGAACTTGTTTCATCA+TGG | 0.553456 | 3.4:+73874916 | None:intergenic |
| TAAACATGAGACAGATACAT+TGG | 0.555533 | 3.4:-73874471 | MS.gene29077:CDS |
| CCAAATCTCTTGCTTCCACA+AGG | 0.558786 | 3.4:+73872366 | None:intergenic |
| GGATAACTCCCATGCTTCTG+AGG | 0.559482 | 3.4:+73873307 | None:intergenic |
| TTGGGTCATCAGAAGTATTG+TGG | 0.562834 | 3.4:-73873509 | MS.gene29077:CDS |
| ATAGGATTGAACAAGATGGT+TGG | 0.565947 | 3.4:-73871736 | MS.gene29077:CDS |
| CAATGAACTCACCTATAGCT+TGG | 0.566046 | 3.4:+73873222 | None:intergenic |
| TTAGCCCTAGCCATTTCAGA+TGG | 0.573010 | 3.4:+73871806 | None:intergenic |
| ACGACCATCAGGGGCATGAG+TGG | 0.576810 | 3.4:+73874895 | None:intergenic |
| TGCCATCAACAAGCAACTCA+AGG | 0.577841 | 3.4:+73872341 | None:intergenic |
| CTTGGTAGCAAAGAGCAAGT+TGG | 0.579238 | 3.4:+73873240 | None:intergenic |
| CTATCATGCAAATGCTCTGG+AGG | 0.582216 | 3.4:-73873892 | MS.gene29077:CDS |
| TTATTGAGTGCATCAAATTG+TGG | 0.582807 | 3.4:+73873658 | None:intergenic |
| ATACAAAGATGCTAGATCAA+GGG | 0.584269 | 3.4:-73872683 | MS.gene29077:CDS |
| TACAAAGATGCTAGATCAAG+GGG | 0.585947 | 3.4:-73872682 | MS.gene29077:CDS |
| CATCGATTTCACGACCATCA+GGG | 0.587965 | 3.4:+73874885 | None:intergenic |
| TGGATCAAGAGCTACTAGAA+TGG | 0.588037 | 3.4:+73872477 | None:intergenic |
| CATACCCAGTCCAAAAGTGC+AGG | 0.589037 | 3.4:+73872313 | None:intergenic |
| AAACACACTTGCCAAATCTG+TGG | 0.591889 | 3.4:-73873731 | MS.gene29077:CDS |
| TGTAGTTCCATCTATAAGTG+GGG | 0.592031 | 3.4:+73872921 | None:intergenic |
| AGCTTCGACGGTAGTGACCG+AGG | 0.593982 | 3.4:-73871851 | MS.gene29077:CDS |
| ATGACTGTGCTTAGCTTCGA+CGG | 0.596323 | 3.4:-73871863 | MS.gene29077:CDS |
| CATTAACAAAATTTCCTGTG+AGG | 0.599891 | 3.4:-73874396 | MS.gene29077:intron |
| AGGACCATCTGAAATGGCTA+GGG | 0.600106 | 3.4:-73871810 | MS.gene29077:CDS |
| CAGTTGTGGACAAAGCAACA+TGG | 0.602977 | 3.4:-73872630 | MS.gene29077:CDS |
| TTAAGTATATCAAAGAAGTG+TGG | 0.608259 | 3.4:-73872516 | MS.gene29077:CDS |
| CTTGAATTCAACAATGCACA+TGG | 0.609877 | 3.4:+73873609 | None:intergenic |
| ATTACCTATCTAGCTATCCA+TGG | 0.610258 | 3.4:-73873834 | MS.gene29077:CDS |
| TACAGAATATTGCCCAACCT+CGG | 0.610840 | 3.4:+73871834 | None:intergenic |
| ACTCAAAACTACAACATGGT+AGG | 0.611324 | 3.4:-73871919 | MS.gene29077:CDS |
| GTAGTTCCATCTATAAGTGG+GGG | 0.611809 | 3.4:+73872922 | None:intergenic |
| TAGCAACTTCGAGTTAGAGA+TGG | 0.613468 | 3.4:-73872077 | MS.gene29077:CDS |
| CTAGTAGCTCTTGATCCACA+AGG | 0.616181 | 3.4:-73872472 | MS.gene29077:CDS |
| TCAGCACAAACAACTTTCTG+AGG | 0.617186 | 3.4:+73871626 | None:intergenic |
| AGATGAGAAGAAGCATATTG+AGG | 0.618660 | 3.4:-73873034 | MS.gene29077:CDS |
| GATGGTATGGATTCCAGTTG+TGG | 0.618882 | 3.4:-73872644 | MS.gene29077:CDS |
| ATCGATTTCACGACCATCAG+GGG | 0.621216 | 3.4:+73874886 | None:intergenic |
| GGTATTCCACCAGTACTCCC+AGG | 0.624299 | 3.4:+73871647 | None:intergenic |
| GTGAGAAAGAAGAATCCTTG+TGG | 0.628042 | 3.4:-73872381 | MS.gene29077:CDS |
| TCTTCTGAAATATATTCAGA+TGG | 0.628420 | 3.4:+73873580 | None:intergenic |
| ATGGAGGCGAAGATCTAGAG+TGG | 0.631690 | 3.4:-73872141 | MS.gene29077:CDS |
| ATAAGCCTATTACAATGATG+TGG | 0.632932 | 3.4:+73871674 | None:intergenic |
| TGCACTCAATAAGCTTGTGA+AGG | 0.633919 | 3.4:-73873647 | MS.gene29077:CDS |
| GGTTGGGCAATATTCTGTAG+AGG | 0.638960 | 3.4:-73871830 | MS.gene29077:CDS |
| AAAGTTGTTTGTGCTGAATG+TGG | 0.644249 | 3.4:-73871620 | MS.gene29077:CDS |
| AAAATCATATGTCTATATGG+AGG | 0.645145 | 3.4:-73872157 | MS.gene29077:CDS |
| GGGTGAGACACACTATGAGA+TGG | 0.645383 | 3.4:-73872662 | MS.gene29077:CDS |
| AAGCATAGGATTGAACAAGA+TGG | 0.647135 | 3.4:-73871740 | MS.gene29077:CDS |
| ATCTTCAATCAACAATGCCG+TGG | 0.650780 | 3.4:-73872579 | MS.gene29077:CDS |
| GAAGCAGCTGATAACTGGCG+AGG | 0.655882 | 3.4:+73874995 | None:intergenic |
| GGGTCACGAACACTGTGCCA+CGG | 0.656210 | 3.4:+73872562 | None:intergenic |
| TTAGTCTTGAAGTACTAAGG+AGG | 0.660034 | 3.4:-73872774 | MS.gene29077:CDS |
| CTTCACATGATATGGATTTG+GGG | 0.664348 | 3.4:-73872427 | MS.gene29077:CDS |
| GCACTTGCAACAGACATAGG+AGG | 0.680826 | 3.4:+73873553 | None:intergenic |
| TTGTACTCAAAACTACAACA+TGG | 0.705926 | 3.4:-73871923 | MS.gene29077:CDS |
| TTTCATGTATCGTTGCTGTG+TGG | 0.711573 | 3.4:-73871579 | MS.gene29077:CDS |
| AGATGCACATGCATCAACAA+TGG | 0.729582 | 3.4:-73873866 | MS.gene29077:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTGAAATGATAATTA+AGG | - | chr3.4:73873210-73873229 | MS.gene29077:intron | 10.0% |
| !! | ATCAATTGGAAAAATTATAT+TGG | - | chr3.4:73872666-73872685 | MS.gene29077:CDS | 15.0% |
| !! | TAGTACTATTAATATGATTA+TGG | - | chr3.4:73872066-73872085 | MS.gene29077:CDS | 15.0% |
| !!! | ACATAATTTGAAACTTAATT+TGG | - | chr3.4:73873391-73873410 | MS.gene29077:intron | 15.0% |
| !! | AATATTTATTACTGTTGTCT+AGG | - | chr3.4:73872263-73872282 | MS.gene29077:intron | 20.0% |
| !! | AGTAATTAAATAACTCACAA+AGG | - | chr3.4:73872311-73872330 | MS.gene29077:intron | 20.0% |
| !! | ATAAACTGGTTAAAAACAAA+TGG | + | chr3.4:73872032-73872051 | None:intergenic | 20.0% |
| !! | CAAAAACTATCTAAATAAAC+TGG | + | chr3.4:73872046-73872065 | None:intergenic | 20.0% |
| !! | CTAAAATGAAAATGATCAAT+TGG | - | chr3.4:73872652-73872671 | MS.gene29077:CDS | 20.0% |
| !! | TTAATATAATCATTCAATGC+TGG | + | chr3.4:73874877-73874896 | None:intergenic | 20.0% |
| !!! | AAGATTTTAATTAAACCATG+CGG | + | chr3.4:73873767-73873786 | None:intergenic | 20.0% |
| !!! | AGCATTGAATGATTATATTA+AGG | - | chr3.4:73874876-73874895 | MS.gene29077:CDS | 20.0% |
| !!! | CAATTGATCATTTTCATTTT+AGG | + | chr3.4:73872654-73872673 | None:intergenic | 20.0% |
| !!! | TATGACACATTTTAGTAATA+TGG | + | chr3.4:73872599-73872618 | None:intergenic | 20.0% |
| ! | AAAATCATATGTCTATATGG+AGG | - | chr3.4:73874427-73874446 | MS.gene29077:CDS | 25.0% |
| ! | AACACAATATCTCATAAAAG+TGG | + | chr3.4:73873445-73873464 | None:intergenic | 25.0% |
| ! | AATAAAGTCTCACAAACAAA+AGG | + | chr3.4:73873733-73873752 | None:intergenic | 25.0% |
| ! | AGATGGAACTACAAAATTAA+GGG | - | chr3.4:73873673-73873692 | MS.gene29077:CDS | 25.0% |
| ! | ATAAAGTCTCACAAACAAAA+GGG | + | chr3.4:73873732-73873751 | None:intergenic | 25.0% |
| ! | ATCAAAAGTTAAGTTAAGAG+AGG | + | chr3.4:73872377-73872396 | None:intergenic | 25.0% |
| ! | ATGAACTTTCATGAAAGTTA+AGG | + | chr3.4:73872235-73872254 | None:intergenic | 25.0% |
| ! | GGAAAAATCATATGTCTATA+TGG | - | chr3.4:73874424-73874443 | MS.gene29077:CDS | 25.0% |
| ! | TAGATGGAACTACAAAATTA+AGG | - | chr3.4:73873672-73873691 | MS.gene29077:CDS | 25.0% |
| ! | TCAAGATTTCATCAACAATT+TGG | + | chr3.4:73871738-73871757 | None:intergenic | 25.0% |
| ! | TTAAGTATATCAAAGAAGTG+TGG | - | chr3.4:73874068-73874087 | MS.gene29077:intron | 25.0% |
| ! | TTGATATACTTAATCACTGA+TGG | + | chr3.4:73874061-73874080 | None:intergenic | 25.0% |
| !! | AGTTTGACCAATGATTATTT+TGG | - | chr3.4:73871937-73871956 | MS.gene29077:CDS | 25.0% |
| !! | TTTAGCAATACGAAACTTTT+TGG | - | chr3.4:73873463-73873482 | MS.gene29077:intron | 25.0% |
| !!! | ATGGTTTTTTATGTTCCATT+TGG | - | chr3.4:73872085-73872104 | MS.gene29077:CDS | 25.0% |
| !!! | ATTTTGATAAATGGAAGCAT+AGG | - | chr3.4:73874830-73874849 | MS.gene29077:CDS | 25.0% |
| !!! | GTTTGAGAGATTTTGATAAA+TGG | - | chr3.4:73874821-73874840 | MS.gene29077:CDS | 25.0% |
| !!! | TCTTCTGAAATATATTCAGA+TGG | + | chr3.4:73873007-73873026 | None:intergenic | 25.0% |
| !!! | TGTCATTTTTGTCGAAATTT+CGG | - | chr3.4:73872619-73872638 | MS.gene29077:CDS | 25.0% |
| ACTCTGACCAAAATAATCAT+TGG | + | chr3.4:73871947-73871966 | None:intergenic | 30.0% | |
| ACTGATGGTTCAATAATGAA+AGG | + | chr3.4:73874046-73874065 | None:intergenic | 30.0% | |
| AGGTATGTTAATGTCGAAAA+AGG | - | chr3.4:73872331-73872350 | MS.gene29077:CDS | 30.0% | |
| ATAAGCCTATTACAATGATG+TGG | + | chr3.4:73874913-73874932 | None:intergenic | 30.0% | |
| ATACAAAGATGCTAGATCAA+GGG | - | chr3.4:73873901-73873920 | MS.gene29077:intron | 30.0% | |
| ATATTCCTATTGCTACCTAT+TGG | - | chr3.4:73873056-73873075 | MS.gene29077:intron | 30.0% | |
| CATTAACAAAATTTCCTGTG+AGG | - | chr3.4:73872188-73872207 | MS.gene29077:intron | 30.0% | |
| CTGATGGTTCAATAATGAAA+GGG | + | chr3.4:73874045-73874064 | None:intergenic | 30.0% | |
| TAAACATGAGACAGATACAT+TGG | - | chr3.4:73872113-73872132 | MS.gene29077:CDS | 30.0% | |
| TAGTTAACGAGATTCAGTTA+AGG | + | chr3.4:73871999-73872018 | None:intergenic | 30.0% | |
| TATACAAAGATGCTAGATCA+AGG | - | chr3.4:73873900-73873919 | MS.gene29077:intron | 30.0% | |
| TATCCTTATCTTTGATTCCA+AGG | - | chr3.4:73872401-73872420 | MS.gene29077:CDS | 30.0% | |
| TATTATTCTATTCTACCGCA+TGG | - | chr3.4:73873749-73873768 | MS.gene29077:CDS | 30.0% | |
| TATTCCTATTGCTACCTATT+GGG | - | chr3.4:73873057-73873076 | MS.gene29077:intron | 30.0% | |
| TCATATAAAAACAACCTCAC+AGG | + | chr3.4:73872205-73872224 | None:intergenic | 30.0% | |
| TCATCAACAATTTGGATAAG+TGG | + | chr3.4:73871730-73871749 | None:intergenic | 30.0% | |
| TCTTCACATGATATGGATTT+GGG | - | chr3.4:73874156-73874175 | MS.gene29077:intron | 30.0% | |
| TGTGACACTTAATATGACAT+AGG | + | chr3.4:73874312-73874331 | None:intergenic | 30.0% | |
| TTATTGAGTGCATCAAATTG+TGG | + | chr3.4:73872929-73872948 | None:intergenic | 30.0% | |
| TTGTACTCAAAACTACAACA+TGG | - | chr3.4:73874661-73874680 | MS.gene29077:intron | 30.0% | |
| TTGTAGTTCCATCTATAAGT+GGG | + | chr3.4:73873667-73873686 | None:intergenic | 30.0% | |
| TTTGTAGTTCCATCTATAAG+TGG | + | chr3.4:73873668-73873687 | None:intergenic | 30.0% | |
| !! | ACTGAATTTCTTGTTGTTGA+AGG | + | chr3.4:73874584-73874603 | None:intergenic | 30.0% |
| !! | ATACGAAACTTTTTGGTGTA+CGG | - | chr3.4:73873470-73873489 | MS.gene29077:CDS | 30.0% |
| !!! | CTGTTATTTTTGGAGAGTTT+TGG | - | chr3.4:73872807-73872826 | MS.gene29077:intron | 30.0% |
| !!! | GACATCAATTTGGTTCTTTT+GGG | - | chr3.4:73874621-73874640 | MS.gene29077:intron | 30.0% |
| !!! | TGACATCAATTTGGTTCTTT+TGG | - | chr3.4:73874620-73874639 | MS.gene29077:intron | 30.0% |
| !!! | TTTTTTATGTTCCATTTGGC+AGG | - | chr3.4:73872089-73872108 | MS.gene29077:CDS | 30.0% |
| AAAACGCTCTTCACATGATA+TGG | - | chr3.4:73874149-73874168 | MS.gene29077:intron | 35.0% | |
| AAAGTTGTTTGTGCTGAATG+TGG | - | chr3.4:73874964-73874983 | MS.gene29077:CDS | 35.0% | |
| AAATAGCCCTGCAAAAAGAA+CGG | + | chr3.4:73873251-73873270 | None:intergenic | 35.0% | |
| AACCAAATTGATGTCACGTT+TGG | + | chr3.4:73874616-73874635 | None:intergenic | 35.0% | |
| AAGCATAGGATTGAACAAGA+TGG | - | chr3.4:73874844-73874863 | MS.gene29077:CDS | 35.0% | |
| AATAACAGCAAATGCTGCTA+AGG | + | chr3.4:73872795-73872814 | None:intergenic | 35.0% | |
| AATACTTCTGATGACCCAAT+AGG | + | chr3.4:73873074-73873093 | None:intergenic | 35.0% | |
| AATTAAGGTAACGACTACGA+TGG | - | chr3.4:73873225-73873244 | MS.gene29077:intron | 35.0% | |
| ACAGAATTCTCTACAATGTC+AGG | + | chr3.4:73872896-73872915 | None:intergenic | 35.0% | |
| ACTCAAAACTACAACATGGT+AGG | - | chr3.4:73874665-73874684 | MS.gene29077:intron | 35.0% | |
| AGCAACCACATCATTGTAAT+AGG | - | chr3.4:73874905-73874924 | MS.gene29077:CDS | 35.0% | |
| ATAGGATTGAACAAGATGGT+TGG | - | chr3.4:73874848-73874867 | MS.gene29077:CDS | 35.0% | |
| ATCGTCCTTTGCATAAATCA+AGG | + | chr3.4:73873639-73873658 | None:intergenic | 35.0% | |
| ATGTAATGTAAAGCTGTCCT+TGG | + | chr3.4:73872421-73872440 | None:intergenic | 35.0% | |
| ATTACCTATCTAGCTATCCA+TGG | - | chr3.4:73872750-73872769 | MS.gene29077:CDS | 35.0% | |
| CAATGTCAGGTAGTTGTTTA+AGG | + | chr3.4:73872883-73872902 | None:intergenic | 35.0% | |
| CACAAATTGCAAGTCTCATA+GGG | - | chr3.4:73873107-73873126 | MS.gene29077:intron | 35.0% | |
| CAGTTAAGGTCATATCAATC+AGG | + | chr3.4:73871985-73872004 | None:intergenic | 35.0% | |
| CATGTGCATTGTTGAATTCA+AGG | - | chr3.4:73872976-73872995 | MS.gene29077:CDS | 35.0% | |
| CTCTTCACATGATATGGATT+TGG | - | chr3.4:73874155-73874174 | MS.gene29077:intron | 35.0% | |
| CTTCACATGATATGGATTTG+GGG | - | chr3.4:73874157-73874176 | MS.gene29077:intron | 35.0% | |
| CTTGAATTCAACAATGCACA+TGG | + | chr3.4:73872978-73872997 | None:intergenic | 35.0% | |
| GACTTATACACATGACAAAC+AGG | - | chr3.4:73873787-73873806 | MS.gene29077:CDS | 35.0% | |
| GATATGGATTTGGGGAAATT+TGG | - | chr3.4:73874165-73874184 | MS.gene29077:intron | 35.0% | |
| GTAATAGGCTTATTCTTCCT+GGG | - | chr3.4:73874920-73874939 | MS.gene29077:CDS | 35.0% | |
| TAACAGAATGCAGCTAAAGA+AGG | - | chr3.4:73871612-73871631 | MS.gene29077:CDS | 35.0% | |
| TACAAAGATGCTAGATCAAG+GGG | - | chr3.4:73873902-73873921 | MS.gene29077:intron | 35.0% | |
| TAGGATTGAACAAGATGGTT+GGG | - | chr3.4:73874849-73874868 | MS.gene29077:CDS | 35.0% | |
| TCACAAATTGCAAGTCTCAT+AGG | - | chr3.4:73873106-73873125 | MS.gene29077:intron | 35.0% | |
| TCTTCTTTCTCACTTGTGAA+TGG | + | chr3.4:73874196-73874215 | None:intergenic | 35.0% | |
| TGTAATAGGCTTATTCTTCC+TGG | - | chr3.4:73874919-73874938 | MS.gene29077:CDS | 35.0% | |
| TGTAGTTCCATCTATAAGTG+GGG | + | chr3.4:73873666-73873685 | None:intergenic | 35.0% | |
| TGTCCTTGGAATCAAAGATA+AGG | + | chr3.4:73872407-73872426 | None:intergenic | 35.0% | |
| TGTTAATGTCGAAAAAGGAG+TGG | - | chr3.4:73872336-73872355 | MS.gene29077:CDS | 35.0% | |
| TTCCAAACGTGACATCAATT+TGG | - | chr3.4:73874611-73874630 | MS.gene29077:intron | 35.0% | |
| ! | AGATGAGAAGAAGCATATTG+AGG | - | chr3.4:73873550-73873569 | MS.gene29077:CDS | 35.0% |
| ! | TATTGAGGCATTTCTCTATC+TGG | - | chr3.4:73873565-73873584 | MS.gene29077:CDS | 35.0% |
| ! | TTTTGGTCAGAGTTCAAACT+CGG | - | chr3.4:73871954-73871973 | MS.gene29077:CDS | 35.0% |
| !! | AGCTTTAAGAAAGAATGCAG+TGG | - | chr3.4:73872554-73872573 | MS.gene29077:CDS | 35.0% |
| !! | AGGTTAGTCTTGAAGTACTA+AGG | - | chr3.4:73873807-73873826 | MS.gene29077:CDS | 35.0% |
| !! | TACGAAACTTTTTGGTGTAC+GGG | - | chr3.4:73873471-73873490 | MS.gene29077:CDS | 35.0% |
| !! | TTAGTCTTGAAGTACTAAGG+AGG | - | chr3.4:73873810-73873829 | MS.gene29077:CDS | 35.0% |
| !!! | ATATCATGTGAAGAGCGTTT+TGG | + | chr3.4:73874150-73874169 | None:intergenic | 35.0% |
| !!! | GCAGCATTTGCTGTTATTTT+TGG | - | chr3.4:73872797-73872816 | MS.gene29077:intron | 35.0% |
| !!! | TATCATGTGAAGAGCGTTTT+GGG | + | chr3.4:73874149-73874168 | None:intergenic | 35.0% |
| AAACACACTTGCCAAATCTG+TGG | - | chr3.4:73872853-73872872 | MS.gene29077:intron | 40.0% | |
| AAGATGTACCAGGTTAGAGA+CGG | + | chr3.4:73873504-73873523 | None:intergenic | 40.0% | |
| AGACACACTATGAGATGGTA+TGG | - | chr3.4:73873927-73873946 | MS.gene29077:intron | 40.0% | |
| AGATGCACATGCATCAACAA+TGG | - | chr3.4:73872718-73872737 | MS.gene29077:CDS | 40.0% | |
| ATCTTCAATCAACAATGCCG+TGG | - | chr3.4:73874005-73874024 | MS.gene29077:intron | 40.0% | |
| ATGACCCAATAGGTAGCAAT+AGG | + | chr3.4:73873064-73873083 | None:intergenic | 40.0% | |
| CAATGAACTCACCTATAGCT+TGG | + | chr3.4:73873365-73873384 | None:intergenic | 40.0% | |
| CTCATGTTTAACCTGCCAAA+TGG | + | chr3.4:73872103-73872122 | None:intergenic | 40.0% | |
| GAGAGCCTTGATTTATGCAA+AGG | - | chr3.4:73873631-73873650 | MS.gene29077:CDS | 40.0% | |
| GAGTTAGAGATGGTCTATGT+AGG | - | chr3.4:73874517-73874536 | MS.gene29077:intron | 40.0% | |
| GATATTCCCCCACTTATAGA+TGG | - | chr3.4:73873656-73873675 | MS.gene29077:CDS | 40.0% | |
| GCGATTGTTAAAGATGTACC+AGG | + | chr3.4:73873514-73873533 | None:intergenic | 40.0% | |
| GTAGTTCCATCTATAAGTGG+GGG | + | chr3.4:73873665-73873684 | None:intergenic | 40.0% | |
| GTCAAACTTTACTTAGCCCT+CGG | + | chr3.4:73871925-73871944 | None:intergenic | 40.0% | |
| GTGAGAAAGAAGAATCCTTG+TGG | - | chr3.4:73874203-73874222 | MS.gene29077:intron | 40.0% | |
| TACAGAATATTGCCCAACCT+CGG | + | chr3.4:73874753-73874772 | None:intergenic | 40.0% | |
| TCAGCACAAACAACTTTCTG+AGG | + | chr3.4:73874961-73874980 | None:intergenic | 40.0% | |
| TCCTTCTGTCATCTACAACA+AGG | + | chr3.4:73874407-73874426 | None:intergenic | 40.0% | |
| TGCACTCAATAAGCTTGTGA+AGG | - | chr3.4:73872937-73872956 | MS.gene29077:CDS | 40.0% | |
| TGGATCAAGAGCTACTAGAA+TGG | + | chr3.4:73874110-73874129 | None:intergenic | 40.0% | |
| TGTTAGAAGCAGCTGATAAC+TGG | + | chr3.4:73871597-73871616 | None:intergenic | 40.0% | |
| TTCTCATCTGTACCAGAGTA+AGG | + | chr3.4:73873539-73873558 | None:intergenic | 40.0% | |
| TTTAAGGAGAGCCACAGATT+TGG | + | chr3.4:73872867-73872886 | None:intergenic | 40.0% | |
| TTTCATGTATCGTTGCTGTG+TGG | - | chr3.4:73875005-73875024 | MS.gene29077:CDS | 40.0% | |
| ! | AACACAACTTTTGCATGCCA+TGG | + | chr3.4:73872770-73872789 | None:intergenic | 40.0% |
| ! | ATTGGAAACTACTGCTGCTT+TGG | - | chr3.4:73872131-73872150 | MS.gene29077:CDS | 40.0% |
| ! | GGACTGAACTTGTTTCATCA+TGG | + | chr3.4:73871671-73871690 | None:intergenic | 40.0% |
| ! | TAGCAACTTCGAGTTAGAGA+TGG | - | chr3.4:73874507-73874526 | MS.gene29077:intron | 40.0% |
| ! | TCCTTGTTGTAGATGACAGA+AGG | - | chr3.4:73874403-73874422 | MS.gene29077:CDS | 40.0% |
| !! | AATCATTGCTCGAAGTGTTG+AGG | - | chr3.4:73871762-73871781 | MS.gene29077:CDS | 40.0% |
| !! | ATCATTGCTCGAAGTGTTGA+GGG | - | chr3.4:73871763-73871782 | MS.gene29077:CDS | 40.0% |
| !! | CATTTGGTCTTAATCCTCCT+AGG | - | chr3.4:73871892-73871911 | MS.gene29077:CDS | 40.0% |
| !! | TCTGGTACATCTTTTCGAGA+CGG | - | chr3.4:73873583-73873602 | MS.gene29077:CDS | 40.0% |
| !! | TTGGGTCATCAGAAGTATTG+TGG | - | chr3.4:73873075-73873094 | MS.gene29077:intron | 40.0% |
| AGTGACTTTGTGAGCAAGAC+TGG | + | chr3.4:73873301-73873320 | None:intergenic | 45.0% | |
| ATGACTGTGCTTAGCTTCGA+CGG | - | chr3.4:73874721-73874740 | MS.gene29077:intron | 45.0% | |
| ATTCGATATGCTTGATGCGC+TGG | - | chr3.4:73872158-73872177 | MS.gene29077:CDS | 45.0% | |
| CAGCTATCATGCAAATGCTC+TGG | - | chr3.4:73872689-73872708 | MS.gene29077:CDS | 45.0% | |
| CAGTTGTGGACAAAGCAACA+TGG | - | chr3.4:73873954-73873973 | MS.gene29077:intron | 45.0% | |
| CATGCCATGGATAGCTAGAT+AGG | + | chr3.4:73872757-73872776 | None:intergenic | 45.0% | |
| CCAAATCTCTTGCTTCCACA+AGG | + | chr3.4:73874221-73874240 | None:intergenic | 45.0% | |
| CCTTGTGGAAGCAAGAGATT+TGG | - | chr3.4:73874218-73874237 | MS.gene29077:intron | 45.0% | |
| CTAGTAGCTCTTGATCCACA+AGG | - | chr3.4:73874112-73874131 | MS.gene29077:intron | 45.0% | |
| CTATCATGCAAATGCTCTGG+AGG | - | chr3.4:73872692-73872711 | MS.gene29077:CDS | 45.0% | |
| CTGTAGAGGACCATCTGAAA+TGG | - | chr3.4:73874768-73874787 | MS.gene29077:intron | 45.0% | |
| GATGGTATGGATTCCAGTTG+TGG | - | chr3.4:73873940-73873959 | MS.gene29077:intron | 45.0% | |
| GCTCTTTGCTACCAAGCTAT+AGG | - | chr3.4:73873351-73873370 | MS.gene29077:intron | 45.0% | |
| GGTTGGGCAATATTCTGTAG+AGG | - | chr3.4:73874754-73874773 | MS.gene29077:intron | 45.0% | |
| TAACAATCGCGTCCTTACTC+TGG | - | chr3.4:73873524-73873543 | MS.gene29077:CDS | 45.0% | |
| TGAGCACTTGCAACAGACAT+AGG | + | chr3.4:73873037-73873056 | None:intergenic | 45.0% | |
| TGCCATCAACAAGCAACTCA+AGG | + | chr3.4:73874246-73874265 | None:intergenic | 45.0% | |
| TGCTGAATGTGGTCGTCAAA+TGG | - | chr3.4:73874975-73874994 | MS.gene29077:CDS | 45.0% | |
| TTAGCCCTAGCCATTTCAGA+TGG | + | chr3.4:73874781-73874800 | None:intergenic | 45.0% | |
| TTTCATCAGCCTCAGAAGCA+TGG | - | chr3.4:73873268-73873287 | MS.gene29077:CDS | 45.0% | |
| ! | AGCCTTGAGTTGCTTGTTGA+TGG | - | chr3.4:73874241-73874260 | MS.gene29077:intron | 45.0% |
| ! | AGGACCATCTGAAATGGCTA+GGG | - | chr3.4:73874774-73874793 | MS.gene29077:intron | 45.0% |
| ! | ATCGATTTCACGACCATCAG+GGG | + | chr3.4:73871701-73871720 | None:intergenic | 45.0% |
| ! | CTTATTCTTCCTGGGAGTAC+TGG | - | chr3.4:73874928-73874947 | MS.gene29077:CDS | 45.0% |
| ! | CTTGGTAGCAAAGAGCAAGT+TGG | + | chr3.4:73873347-73873366 | None:intergenic | 45.0% |
| ! | GCATGCATGCATGTGTCATT+TGG | - | chr3.4:73871876-73871895 | MS.gene29077:CDS | 45.0% |
| ! | TCTGAAATGGCTAGGGCTAA+AGG | - | chr3.4:73874781-73874800 | MS.gene29077:intron | 45.0% |
| ! | TGATCCTGCACTTTTGGACT+GGG | - | chr3.4:73874267-73874286 | MS.gene29077:intron | 45.0% |
| ! | TTCATCAGCCTCAGAAGCAT+GGG | - | chr3.4:73873269-73873288 | MS.gene29077:CDS | 45.0% |
| ! | TTGATCCTGCACTTTTGGAC+TGG | - | chr3.4:73874266-73874285 | MS.gene29077:intron | 45.0% |
| !! | ACATCGATTTCACGACCATC+AGG | + | chr3.4:73871703-73871722 | None:intergenic | 45.0% |
| !! | CATCGATTTCACGACCATCA+GGG | + | chr3.4:73871702-73871721 | None:intergenic | 45.0% |
| !! | CATGTTGCTTTGTCCACAAC+TGG | + | chr3.4:73873956-73873975 | None:intergenic | 45.0% |
| !!! | TGGCATTGATCCTGCACTTT+TGG | - | chr3.4:73874261-73874280 | MS.gene29077:intron | 45.0% |
| ATGGAGGCGAAGATCTAGAG+TGG | - | chr3.4:73874443-73874462 | MS.gene29077:CDS | 50.0% | |
| GAAGATAGCCGTCTCTAACC+TGG | - | chr3.4:73873493-73873512 | MS.gene29077:CDS | 50.0% | |
| GCACTTGCAACAGACATAGG+AGG | + | chr3.4:73873034-73873053 | None:intergenic | 50.0% | |
| GGATAACTCCCATGCTTCTG+AGG | + | chr3.4:73873280-73873299 | None:intergenic | 50.0% | |
| GGGTGAGACACACTATGAGA+TGG | - | chr3.4:73873922-73873941 | MS.gene29077:intron | 50.0% | |
| TGGGAGGACAATCTTCCTTG+TGG | + | chr3.4:73874130-73874149 | None:intergenic | 50.0% | |
| ! | ACGATGGCCGTTCTTTTTGC+AGG | - | chr3.4:73873241-73873260 | MS.gene29077:CDS | 50.0% |
| ! | CATACCCAGTCCAAAAGTGC+AGG | + | chr3.4:73874274-73874293 | None:intergenic | 50.0% |
| ! | CGATGGCCGTTCTTTTTGCA+GGG | - | chr3.4:73873242-73873261 | MS.gene29077:CDS | 50.0% |
| ! | GAGGACCATCTGAAATGGCT+AGG | - | chr3.4:73874773-73874792 | MS.gene29077:intron | 50.0% |
| !! | ATTCTTCCTGGGAGTACTGG+TGG | - | chr3.4:73874931-73874950 | MS.gene29077:CDS | 50.0% |
| !! | TCATGCAAATGCTCTGGAGG+TGG | - | chr3.4:73872695-73872714 | MS.gene29077:CDS | 50.0% |
| !!! | CATGTGAAGAGCGTTTTGGG+AGG | + | chr3.4:73874146-73874165 | None:intergenic | 50.0% |
| GAAGCAGCTGATAACTGGCG+AGG | + | chr3.4:73871592-73871611 | None:intergenic | 55.0% | |
| GGTATTCCACCAGTACTCCC+AGG | + | chr3.4:73874940-73874959 | None:intergenic | 55.0% | |
| AGCTTCGACGGTAGTGACCG+AGG | - | chr3.4:73874733-73874752 | MS.gene29077:intron | 60.0% | |
| CAGTCCACTCATGCCCCTGA+TGG | - | chr3.4:73871685-73871704 | MS.gene29077:CDS | 60.0% | |
| CCTCCTAGGAGTTCAGCCGA+GGG | - | chr3.4:73871906-73871925 | MS.gene29077:CDS | 60.0% | |
| CGACGGTAGTGACCGAGGTT+GGG | - | chr3.4:73874738-73874757 | MS.gene29077:intron | 60.0% | |
| GGGTCACGAACACTGTGCCA+CGG | + | chr3.4:73874025-73874044 | None:intergenic | 60.0% | |
| TAGCCCTCGGCTGAACTCCT+AGG | + | chr3.4:73871912-73871931 | None:intergenic | 60.0% | |
| TCCTCCTAGGAGTTCAGCCG+AGG | - | chr3.4:73871905-73871924 | MS.gene29077:CDS | 60.0% | |
| TCGACGGTAGTGACCGAGGT+TGG | - | chr3.4:73874737-73874756 | MS.gene29077:intron | 60.0% | |
| ! | ACGACCATCAGGGGCATGAG+TGG | + | chr3.4:73871692-73871711 | None:intergenic | 60.0% |
| CCCTCGGCTGAACTCCTAGG+AGG | + | chr3.4:73871909-73871928 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 73871574 | 73875032 | 73871574 | ID=MS.gene29077 |
| chr3.4 | mRNA | 73871574 | 73875032 | 73871574 | ID=MS.gene29077.t1;Parent=MS.gene29077 |
| chr3.4 | exon | 73874811 | 73875032 | 73874811 | ID=MS.gene29077.t1.exon1;Parent=MS.gene29077.t1 |
| chr3.4 | CDS | 73874811 | 73875032 | 73874811 | ID=cds.MS.gene29077.t1;Parent=MS.gene29077.t1 |
| chr3.4 | exon | 73874397 | 73874495 | 73874397 | ID=MS.gene29077.t1.exon2;Parent=MS.gene29077.t1 |
| chr3.4 | CDS | 73874397 | 73874495 | 73874397 | ID=cds.MS.gene29077.t1;Parent=MS.gene29077.t1 |
| chr3.4 | exon | 73873466 | 73873914 | 73873466 | ID=MS.gene29077.t1.exon3;Parent=MS.gene29077.t1 |
| chr3.4 | CDS | 73873466 | 73873914 | 73873466 | ID=cds.MS.gene29077.t1;Parent=MS.gene29077.t1 |
| chr3.4 | exon | 73873234 | 73873343 | 73873234 | ID=MS.gene29077.t1.exon4;Parent=MS.gene29077.t1 |
| chr3.4 | CDS | 73873234 | 73873343 | 73873234 | ID=cds.MS.gene29077.t1;Parent=MS.gene29077.t1 |
| chr3.4 | exon | 73872912 | 73873054 | 73872912 | ID=MS.gene29077.t1.exon5;Parent=MS.gene29077.t1 |
| chr3.4 | CDS | 73872912 | 73873054 | 73872912 | ID=cds.MS.gene29077.t1;Parent=MS.gene29077.t1 |
| chr3.4 | exon | 73872318 | 73872797 | 73872318 | ID=MS.gene29077.t1.exon6;Parent=MS.gene29077.t1 |
| chr3.4 | CDS | 73872318 | 73872797 | 73872318 | ID=cds.MS.gene29077.t1;Parent=MS.gene29077.t1 |
| chr3.4 | exon | 73871574 | 73872191 | 73871574 | ID=MS.gene29077.t1.exon7;Parent=MS.gene29077.t1 |
| chr3.4 | CDS | 73871574 | 73872191 | 73871574 | ID=cds.MS.gene29077.t1;Parent=MS.gene29077.t1 |
| Gene Sequence |
| Protein sequence |
