Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049698.t1 | XP_003600643.1 | 98.9 | 842 | 9 | 0 | 1 | 842 | 1 | 842 | 0.00E+00 | 1685.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049698.t1 | Q9FX32 | 68.7 | 838 | 259 | 1 | 2 | 839 | 4 | 838 | 0.0e+00 | 1183.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049698.t1 | G7J800 | 98.9 | 842 | 9 | 0 | 1 | 842 | 1 | 842 | 0.0e+00 | 1685.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049227 | MS.gene049698 | 0.827236 | 1.75E-54 | -1.69E-46 |
| MS.gene049698 | MS.gene05017 | 0.847546 | 1.08E-59 | -1.69E-46 |
| MS.gene049698 | MS.gene053144 | 0.803802 | 2.93E-49 | -1.69E-46 |
| MS.gene049698 | MS.gene053536 | 0.8282 | 1.03E-54 | -1.69E-46 |
| MS.gene049698 | MS.gene053538 | 0.822649 | 2.12E-53 | -1.69E-46 |
| MS.gene049698 | MS.gene055764 | 0.804025 | 2.63E-49 | -1.69E-46 |
| MS.gene049698 | MS.gene058909 | 0.844278 | 8.35E-59 | -1.69E-46 |
| MS.gene049698 | MS.gene058912 | 0.842071 | 3.23E-58 | -1.69E-46 |
| MS.gene049698 | MS.gene05894 | 0.800213 | 1.60E-48 | -1.69E-46 |
| MS.gene049698 | MS.gene059424 | 0.817588 | 3.05E-52 | -1.69E-46 |
| MS.gene049698 | MS.gene061567 | 0.810654 | 1.04E-50 | -1.69E-46 |
| MS.gene049698 | MS.gene06341 | 0.824958 | 6.09E-54 | -1.69E-46 |
| MS.gene049698 | MS.gene066929 | 0.840028 | 1.11E-57 | -1.69E-46 |
| MS.gene049698 | MS.gene067270 | 0.806888 | 6.61E-50 | -1.69E-46 |
| MS.gene049698 | MS.gene067271 | 0.807113 | 5.92E-50 | -1.69E-46 |
| MS.gene049698 | MS.gene06793 | 0.804943 | 1.69E-49 | -1.69E-46 |
| MS.gene049698 | MS.gene07246 | 0.818271 | 2.14E-52 | -1.69E-46 |
| MS.gene049698 | MS.gene20768 | 0.801358 | 9.35E-49 | -1.69E-46 |
| MS.gene049698 | MS.gene20903 | 0.814728 | 1.33E-51 | -1.69E-46 |
| MS.gene049698 | MS.gene22148 | 0.839147 | 1.89E-57 | -1.69E-46 |
| MS.gene049698 | MS.gene26381 | 0.835275 | 1.84E-56 | -1.69E-46 |
| MS.gene049698 | MS.gene26464 | 0.801499 | 8.75E-49 | -1.69E-46 |
| MS.gene049698 | MS.gene26465 | 0.821985 | 3.02E-53 | -1.69E-46 |
| MS.gene049698 | MS.gene26855 | 0.804333 | 2.27E-49 | -1.69E-46 |
| MS.gene049698 | MS.gene27860 | 0.80408 | 2.56E-49 | -1.69E-46 |
| MS.gene049698 | MS.gene29077 | 0.801033 | 1.09E-48 | -1.69E-46 |
| MS.gene049698 | MS.gene29731 | 0.811329 | 7.39E-51 | -1.69E-46 |
| MS.gene049698 | MS.gene29884 | 0.823052 | 1.70E-53 | -1.69E-46 |
| MS.gene049698 | MS.gene32024 | 0.805416 | 1.35E-49 | -1.69E-46 |
| MS.gene049698 | MS.gene32360 | 0.811187 | 7.94E-51 | -1.69E-46 |
| MS.gene049698 | MS.gene34286 | 0.80734 | 5.30E-50 | -1.69E-46 |
| MS.gene049698 | MS.gene35007 | 0.832891 | 7.30E-56 | -1.69E-46 |
| MS.gene049698 | MS.gene37852 | 0.807595 | 4.68E-50 | -1.69E-46 |
| MS.gene049698 | MS.gene38303 | 0.80396 | 2.72E-49 | -1.69E-46 |
| MS.gene049698 | MS.gene38763 | 0.810456 | 1.14E-50 | -1.69E-46 |
| MS.gene049698 | MS.gene38829 | 0.82259 | 2.18E-53 | -1.69E-46 |
| MS.gene049698 | MS.gene39297 | 0.800336 | 1.51E-48 | -1.69E-46 |
| MS.gene049698 | MS.gene39844 | 0.812464 | 4.18E-51 | -1.69E-46 |
| MS.gene049698 | MS.gene39845 | 0.829483 | 5.02E-55 | -1.69E-46 |
| MS.gene049698 | MS.gene40949 | 0.82215 | 2.76E-53 | -1.69E-46 |
| MS.gene049698 | MS.gene47958 | 0.842608 | 2.33E-58 | -1.69E-46 |
| MS.gene049698 | MS.gene47960 | 0.840641 | 7.70E-58 | -1.69E-46 |
| MS.gene049698 | MS.gene47963 | 0.846499 | 2.09E-59 | -1.69E-46 |
| MS.gene049698 | MS.gene51520 | 0.807588 | 4.70E-50 | -1.69E-46 |
| MS.gene049698 | MS.gene51531 | 0.813624 | 2.33E-51 | -1.69E-46 |
| MS.gene049698 | MS.gene53376 | 0.805043 | 1.61E-49 | -1.69E-46 |
| MS.gene049698 | MS.gene58836 | 0.826949 | 2.05E-54 | -1.69E-46 |
| MS.gene049698 | MS.gene59879 | 0.821484 | 3.94E-53 | -1.69E-46 |
| MS.gene049698 | MS.gene59880 | 0.804622 | 1.98E-49 | -1.69E-46 |
| MS.gene049698 | MS.gene62603 | 0.816858 | 4.45E-52 | -1.69E-46 |
| MS.gene049698 | MS.gene71459 | 0.827492 | 1.52E-54 | -1.69E-46 |
| MS.gene049698 | MS.gene71460 | 0.823946 | 1.05E-53 | -1.69E-46 |
| MS.gene049698 | MS.gene75220 | 0.811882 | 5.61E-51 | -1.69E-46 |
| MS.gene049698 | MS.gene80867 | 0.806525 | 7.89E-50 | -1.69E-46 |
| MS.gene049698 | MS.gene84497 | 0.804691 | 1.91E-49 | -1.69E-46 |
| MS.gene049698 | MS.gene91794 | 0.800523 | 1.39E-48 | -1.69E-46 |
| MS.gene049698 | MS.gene94168 | 0.811525 | 6.70E-51 | -1.69E-46 |
| MS.gene049698 | MS.gene98871 | 0.818345 | 2.06E-52 | -1.69E-46 |
| MS.gene049698 | MS.gene99415 | 0.819778 | 9.71E-53 | -1.69E-46 |
| MS.gene049698 | MS.gene99878 | 0.830716 | 2.51E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene049698 | MS.gene005566 | PPI |
| MS.gene049698 | MS.gene28775 | PPI |
| MS.gene85350 | MS.gene049698 | PPI |
| MS.gene012174 | MS.gene049698 | PPI |
| MS.gene025337 | MS.gene049698 | PPI |
| MS.gene049698 | MS.gene20759 | PPI |
| MS.gene049698 | MS.gene070146 | PPI |
| MS.gene049698 | MS.gene030241 | PPI |
| MS.gene049698 | MS.gene062124 | PPI |
| MS.gene049698 | MS.gene22944 | PPI |
| MS.gene049698 | MS.gene07237 | PPI |
| MS.gene049698 | MS.gene07013 | PPI |
| MS.gene049698 | MS.gene26705 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049698.t1 | MTR_3g064610 | 98.931 | 842 | 9 | 0 | 1 | 842 | 1 | 842 | 0.0 | 1739 |
| MS.gene049698.t1 | MTR_5g076830 | 82.241 | 839 | 143 | 3 | 1 | 838 | 1 | 834 | 0.0 | 1456 |
| MS.gene049698.t1 | MTR_6g478000 | 63.480 | 816 | 228 | 2 | 19 | 834 | 18 | 763 | 0.0 | 1073 |
| MS.gene049698.t1 | MTR_6g478030 | 75.279 | 627 | 155 | 0 | 133 | 759 | 894 | 1520 | 0.0 | 993 |
| MS.gene049698.t1 | MTR_1g088170 | 56.592 | 804 | 345 | 2 | 1 | 804 | 1 | 800 | 0.0 | 943 |
| MS.gene049698.t1 | MTR_7g108930 | 55.405 | 814 | 356 | 3 | 1 | 814 | 1 | 807 | 0.0 | 936 |
| MS.gene049698.t1 | MTR_2g044070 | 56.186 | 776 | 332 | 6 | 41 | 814 | 35 | 804 | 0.0 | 930 |
| MS.gene049698.t1 | MTR_4g124660 | 56.718 | 774 | 329 | 4 | 41 | 813 | 37 | 805 | 0.0 | 927 |
| MS.gene049698.t1 | MTR_4g124660 | 58.496 | 718 | 292 | 4 | 41 | 757 | 37 | 749 | 0.0 | 876 |
| MS.gene049698.t1 | MTR_6g478020 | 70.500 | 200 | 55 | 1 | 639 | 834 | 1 | 200 | 7.98e-92 | 315 |
| MS.gene049698.t1 | MTR_0277s0020 | 58.854 | 192 | 43 | 3 | 647 | 834 | 1159 | 1318 | 3.95e-62 | 229 |
| MS.gene049698.t1 | MTR_0419s0050 | 52.532 | 158 | 15 | 2 | 583 | 740 | 1 | 98 | 4.03e-43 | 151 |
| MS.gene049698.t1 | MTR_5g091340 | 27.027 | 555 | 321 | 21 | 286 | 787 | 171 | 694 | 4.18e-40 | 160 |
| MS.gene049698.t1 | MTR_4g115620 | 27.306 | 542 | 312 | 20 | 286 | 779 | 168 | 675 | 3.63e-39 | 157 |
| MS.gene049698.t1 | MTR_3g047380 | 26.104 | 521 | 326 | 17 | 286 | 769 | 167 | 665 | 6.99e-38 | 153 |
| MS.gene049698.t1 | MTR_0419s0010 | 74.576 | 59 | 15 | 0 | 747 | 805 | 12 | 70 | 2.67e-26 | 103 |
| MS.gene049698.t1 | MTR_0277s0030 | 60.714 | 84 | 33 | 0 | 583 | 666 | 1 | 84 | 6.57e-25 | 104 |
| MS.gene049698.t1 | MTR_0277s0030 | 50.617 | 81 | 36 | 2 | 758 | 834 | 65 | 145 | 2.33e-20 | 91.3 |
| MS.gene049698.t1 | MTR_4g021160 | 66.234 | 77 | 23 | 2 | 1 | 76 | 3 | 77 | 8.16e-25 | 99.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene049698.t1 | AT1G73370 | 70.147 | 814 | 240 | 1 | 2 | 815 | 4 | 814 | 0.0 | 1224 |
| MS.gene049698.t1 | AT1G73370 | 70.147 | 814 | 240 | 1 | 2 | 815 | 4 | 814 | 0.0 | 1224 |
| MS.gene049698.t1 | AT5G37180 | 71.159 | 794 | 224 | 2 | 21 | 813 | 13 | 802 | 0.0 | 1205 |
| MS.gene049698.t1 | AT1G73370 | 71.429 | 770 | 220 | 0 | 46 | 815 | 1 | 770 | 0.0 | 1180 |
| MS.gene049698.t1 | AT5G37180 | 74.919 | 614 | 154 | 0 | 200 | 813 | 1 | 614 | 0.0 | 994 |
| MS.gene049698.t1 | AT4G02280 | 57.377 | 793 | 337 | 1 | 22 | 814 | 18 | 809 | 0.0 | 969 |
| MS.gene049698.t1 | AT5G49190 | 55.233 | 793 | 354 | 1 | 22 | 814 | 15 | 806 | 0.0 | 928 |
| MS.gene049698.t1 | AT5G49190 | 55.769 | 780 | 344 | 1 | 35 | 814 | 18 | 796 | 0.0 | 924 |
| MS.gene049698.t1 | AT3G43190 | 56.314 | 776 | 331 | 5 | 41 | 814 | 39 | 808 | 0.0 | 918 |
| MS.gene049698.t1 | AT3G43190 | 56.314 | 776 | 331 | 5 | 41 | 814 | 39 | 808 | 0.0 | 918 |
| MS.gene049698.t1 | AT5G37180 | 76.439 | 556 | 131 | 0 | 258 | 813 | 1 | 556 | 0.0 | 917 |
| MS.gene049698.t1 | AT5G20830 | 56.774 | 775 | 329 | 4 | 41 | 814 | 39 | 808 | 0.0 | 914 |
| MS.gene049698.t1 | AT5G20830 | 56.774 | 775 | 329 | 4 | 41 | 814 | 39 | 808 | 0.0 | 914 |
| MS.gene049698.t1 | AT5G20830 | 56.774 | 775 | 329 | 4 | 41 | 814 | 39 | 808 | 0.0 | 914 |
| MS.gene049698.t1 | AT5G49190 | 57.781 | 739 | 311 | 1 | 76 | 814 | 3 | 740 | 0.0 | 911 |
| MS.gene049698.t1 | AT1G04920 | 27.455 | 550 | 326 | 21 | 286 | 790 | 172 | 693 | 1.48e-38 | 155 |
| MS.gene049698.t1 | AT5G11110 | 27.726 | 541 | 315 | 19 | 286 | 784 | 177 | 683 | 1.71e-38 | 155 |
| MS.gene049698.t1 | AT5G20280 | 26.568 | 542 | 333 | 19 | 286 | 786 | 170 | 687 | 1.35e-37 | 152 |
| MS.gene049698.t1 | AT4G10120 | 26.755 | 527 | 311 | 18 | 286 | 770 | 23 | 516 | 3.19e-36 | 147 |
| MS.gene049698.t1 | AT4G10120 | 26.465 | 529 | 310 | 19 | 286 | 770 | 197 | 690 | 5.17e-36 | 147 |
| MS.gene049698.t1 | AT4G10120 | 26.465 | 529 | 310 | 19 | 286 | 770 | 197 | 690 | 5.17e-36 | 147 |
| MS.gene049698.t1 | AT4G10120 | 26.465 | 529 | 310 | 19 | 286 | 770 | 197 | 690 | 5.17e-36 | 147 |
| MS.gene049698.t1 | AT4G10120 | 26.482 | 506 | 299 | 16 | 305 | 770 | 17 | 489 | 9.90e-35 | 143 |
Find 173 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAACCTTATGTTTAAGAATT+TGG | 0.104517 | 3.3:-58245877 | MS.gene049698:intron |
| TGCAAACAAGTTGCTGAATA+TGG | 0.128055 | 3.3:-58245976 | MS.gene049698:CDS |
| TTCTCTATTCATGGTTATTT+TGG | 0.154276 | 3.3:-58248529 | MS.gene049698:CDS |
| ATTACTGTTGATGGTGTTTC+TGG | 0.165228 | 3.3:-58246249 | MS.gene049698:CDS |
| TCTACCTTTCTCAAGGTATT+TGG | 0.175204 | 3.3:+58250088 | None:intergenic |
| AATGCACTTGAAGCAGATTT+TGG | 0.198635 | 3.3:-58249274 | MS.gene049698:CDS |
| CTTGCCATTGAGAAGATTAT+AGG | 0.209492 | 3.3:+58246639 | None:intergenic |
| TATCTTTGCTTTGCCACTTT+TGG | 0.224921 | 3.3:+58245915 | None:intergenic |
| AAATTACACTGATGGGAATT+TGG | 0.244255 | 3.3:-58247509 | MS.gene049698:CDS |
| GGACTATGCAGAGTTGTTTC+AGG | 0.262656 | 3.3:-58246934 | MS.gene049698:CDS |
| AATTTCATGGCTTCTGCATC+AGG | 0.265392 | 3.3:-58250200 | None:intergenic |
| AGGTAATCGGTTGATGTTAT+AGG | 0.265521 | 3.3:+58249462 | None:intergenic |
| ATATTTGATTCCTATCATTC+TGG | 0.280201 | 3.3:+58250012 | None:intergenic |
| GTTGTGATCTTCTCTATTCA+TGG | 0.282418 | 3.3:-58248538 | MS.gene049698:CDS |
| TTAAAATTGCCTTCTTCAAT+TGG | 0.283903 | 3.3:-58249226 | MS.gene049698:CDS |
| TTAAGAACTTTGAAACAAAA+TGG | 0.290010 | 3.3:+58249194 | None:intergenic |
| CCTTGGTTCAAAATCATCAT+AGG | 0.298372 | 3.3:+58248783 | None:intergenic |
| AATTGAAGGGTCAGTTTAGA+TGG | 0.312260 | 3.3:-58246443 | MS.gene049698:CDS |
| CAAATATTGGAAGGCAATCT+TGG | 0.312412 | 3.3:-58249996 | MS.gene049698:CDS |
| TATAATAAATCTTCAATTGT+AGG | 0.319514 | 3.3:+58246808 | None:intergenic |
| GTTACCTGTCCGCCGGTATC+TGG | 0.321700 | 3.3:+58248484 | None:intergenic |
| GGCAAAGACACAACCTATAT+TGG | 0.326803 | 3.3:-58249149 | MS.gene049698:CDS |
| TAAGGCCAGACCCTGGAGTT+TGG | 0.328183 | 3.3:-58249524 | MS.gene049698:CDS |
| TTGCCTTCTTCAATTGGAAA+TGG | 0.328203 | 3.3:-58249220 | MS.gene049698:CDS |
| GAATTTGGCAGCTTCTCTTA+TGG | 0.328254 | 3.3:-58247494 | MS.gene049698:CDS |
| GGAAAACCAGATCTCATTAT+AGG | 0.331613 | 3.3:-58247532 | MS.gene049698:CDS |
| TTTGGTCAAGCAGATGTTCT+TGG | 0.337396 | 3.3:-58248511 | MS.gene049698:CDS |
| GAGAAGAGATGGCAGAAATA+AGG | 0.340112 | 3.3:-58246494 | MS.gene049698:CDS |
| TTCCAATTCCTGATTGCATT+TGG | 0.342271 | 3.3:+58247845 | None:intergenic |
| TTCCTTGAATTTGAGGTAAT+CGG | 0.343680 | 3.3:+58249449 | None:intergenic |
| TGAACAGGTAGTTTACATAT+TGG | 0.345797 | 3.3:-58248080 | MS.gene049698:intron |
| CCTGCTTTGTATGAAGCATT+TGG | 0.348320 | 3.3:-58246342 | MS.gene049698:CDS |
| ATATTCTTTCCTTGAATTTG+AGG | 0.349412 | 3.3:+58249442 | None:intergenic |
| CATTTGGTTCCTTGAGCATC+AGG | 0.353289 | 3.3:+58247861 | None:intergenic |
| CATCATAACTAGCACATATC+AGG | 0.355198 | 3.3:-58247176 | MS.gene049698:CDS |
| TTCTCCATGTTCATTGGATC+TGG | 0.357587 | 3.3:+58248592 | None:intergenic |
| TTTGCTACTGCAGGCGTTCA+AGG | 0.369565 | 3.3:-58245532 | MS.gene049698:intron |
| AACCAAATGCAATCAGGAAT+TGG | 0.378445 | 3.3:-58247847 | MS.gene049698:CDS |
| AGAAATGGAGCAAGTTATAA+AGG | 0.380139 | 3.3:-58250036 | MS.gene049698:CDS |
| TCATGATTTGATGGAAGAAA+TGG | 0.387496 | 3.3:-58250051 | MS.gene049698:CDS |
| GAATGATAGGAATCAAATAT+TGG | 0.388211 | 3.3:-58250009 | MS.gene049698:CDS |
| TCACCAAATTCTTAAACATA+AGG | 0.390237 | 3.3:+58245874 | None:intergenic |
| AAGGCCAGACCCTGGAGTTT+GGG | 0.391013 | 3.3:-58249523 | MS.gene049698:CDS |
| GGTTGTTGAGGTTCATCAAT+TGG | 0.407027 | 3.3:+58245763 | None:intergenic |
| GTGAACCTTGTCATAGTTGG+AGG | 0.408099 | 3.3:-58246546 | MS.gene049698:CDS |
| CATAAAAGTTCATGATTTGA+TGG | 0.411962 | 3.3:-58250060 | MS.gene049698:CDS |
| TGGCAAAGCAAAGATACATT+TGG | 0.414762 | 3.3:-58245908 | MS.gene049698:CDS |
| TGTAAGGAAAATAGACAGTT+TGG | 0.415507 | 3.3:+58246863 | None:intergenic |
| GATAACAAGTAGTCCAATAT+AGG | 0.417385 | 3.3:+58249136 | None:intergenic |
| AGCACATATCAGGAAATTGC+TGG | 0.421222 | 3.3:-58247166 | MS.gene049698:CDS |
| TGTTCATTGGATCTGGAGCT+TGG | 0.422689 | 3.3:+58248599 | None:intergenic |
| TCACTTCTCATGTCAATTCA+TGG | 0.423608 | 3.3:-58247230 | MS.gene049698:CDS |
| GAGACTCTGCTGCTTGGAGT+TGG | 0.425685 | 3.3:+58245735 | None:intergenic |
| CTCCATTGAGAGGATCGATA+TGG | 0.425897 | 3.3:+58246223 | None:intergenic |
| TTATAAAGGACCAGAATGAT+AGG | 0.436409 | 3.3:-58250022 | MS.gene049698:CDS |
| GCGTTCAAGGTCCAGATCAC+AGG | 0.438873 | 3.3:-58245519 | MS.gene049698:CDS |
| CGATTTATTGCCGACACAAA+GGG | 0.445300 | 3.3:-58246378 | MS.gene049698:CDS |
| GAAGCTTTGCAACTGAGCTC+AGG | 0.445828 | 3.3:+58248860 | None:intergenic |
| CTACTCTGCTTGGATGCATC+TGG | 0.446134 | 3.3:+58250134 | None:intergenic |
| TAATTTCCTATAATGAGATC+TGG | 0.449484 | 3.3:+58247526 | None:intergenic |
| AAACATACCACAAGAATTTG+AGG | 0.450197 | 3.3:+58247992 | None:intergenic |
| TGACATGAGAAGTGATACTT+AGG | 0.450801 | 3.3:+58247238 | None:intergenic |
| ATTGGATCAAGTGAGAGCTT+TGG | 0.450839 | 3.3:-58248062 | MS.gene049698:CDS |
| CATTCATAGGTTTAAGCAGT+GGG | 0.453853 | 3.3:-58248692 | MS.gene049698:intron |
| ATAAAGGAATCCTGCGTCAA+TGG | 0.454020 | 3.3:-58247770 | MS.gene049698:CDS |
| CTCTTATGGCTAGCAAACTT+AGG | 0.458904 | 3.3:-58247480 | MS.gene049698:CDS |
| CATATGTTGCCTTTGCAGTA+AGG | 0.461366 | 3.3:-58249542 | MS.gene049698:CDS |
| GCCATACCATTCGACTAAAC+CGG | 0.464737 | 3.3:+58246593 | None:intergenic |
| TTGATCTTAACCCTGTGATC+TGG | 0.465172 | 3.3:+58245508 | None:intergenic |
| GTTCTTGGCTTGCCAGATAC+CGG | 0.467570 | 3.3:-58248496 | MS.gene049698:CDS |
| CCAGCGGAAATTACTGTTGA+TGG | 0.471975 | 3.3:-58246258 | MS.gene049698:CDS |
| GCAAACAAGTTGCTGAATAT+GGG | 0.473370 | 3.3:-58245975 | MS.gene049698:CDS |
| TTGGTGAACCTTGTCATAGT+TGG | 0.474389 | 3.3:-58246549 | MS.gene049698:CDS |
| GCATGACTTTCATATTGTCC+AGG | 0.475326 | 3.3:+58246973 | None:intergenic |
| ATCACAACATTGAATATTGT+GGG | 0.477811 | 3.3:+58248553 | None:intergenic |
| TCAAGGAACCAAATGCAATC+AGG | 0.478957 | 3.3:-58247853 | MS.gene049698:CDS |
| GATGTTGTGAAGAACATAAC+CGG | 0.480452 | 3.3:-58246612 | MS.gene049698:CDS |
| AACCGATTACCTCAAATTCA+AGG | 0.481703 | 3.3:-58249451 | MS.gene049698:CDS |
| AATTGAAAAGTATCAATTGA+AGG | 0.483871 | 3.3:-58246457 | MS.gene049698:CDS |
| TAAAGGAATCCTGCGTCAAT+GGG | 0.485877 | 3.3:-58247769 | MS.gene049698:CDS |
| GATCACAACATTGAATATTG+TGG | 0.486777 | 3.3:+58248552 | None:intergenic |
| TGCTGCTTGGAGTTGGACAC+TGG | 0.491085 | 3.3:+58245742 | None:intergenic |
| TTCCATATCGATCCTCTCAA+TGG | 0.492417 | 3.3:-58246225 | MS.gene049698:CDS |
| AAAACCTATAATCTTCTCAA+TGG | 0.494217 | 3.3:-58246643 | MS.gene049698:CDS |
| ATTCCTTTATCCGTCTGAAA+AGG | 0.495407 | 3.3:+58247783 | None:intergenic |
| AATACCTTGAGAAAGGTAGA+AGG | 0.495548 | 3.3:-58250085 | MS.gene049698:CDS |
| GACTATGCAGAGTTGTTTCA+GGG | 0.497122 | 3.3:-58246933 | MS.gene049698:CDS |
| TTTACATATTCCCAAACTCC+AGG | 0.498127 | 3.3:+58249513 | None:intergenic |
| GAACAAAAGGTTGAGAAGCT+TGG | 0.499509 | 3.3:-58246568 | MS.gene049698:CDS |
| GAAACAACTCTGCATAGTCC+TGG | 0.499572 | 3.3:+58246937 | None:intergenic |
| TATTCCCAAACTCCAGGGTC+TGG | 0.501451 | 3.3:+58249519 | None:intergenic |
| GAGTGCTTGGTGTCAAGGAT+TGG | 0.503252 | 3.3:+58247822 | None:intergenic |
| AATGGTATGGCAAGAACAAA+AGG | 0.505067 | 3.3:-58246581 | MS.gene049698:CDS |
| ATCAAAAGACAGAGAAGAGA+TGG | 0.505369 | 3.3:-58246505 | MS.gene049698:CDS |
| CTCTCCATTGCGATGTCTAT+CGG | 0.511081 | 3.3:+58246407 | None:intergenic |
| CTTACTGCAAAGGCAACATA+TGG | 0.514465 | 3.3:+58249543 | None:intergenic |
| ATTGAAAAGTATCAATTGAA+GGG | 0.514770 | 3.3:-58246456 | MS.gene049698:CDS |
| TTTGCCAAATACCTTGAGAA+AGG | 0.517857 | 3.3:-58250092 | MS.gene049698:CDS |
| ATTATAGGAAATTACACTGA+TGG | 0.519428 | 3.3:-58247517 | MS.gene049698:CDS |
| TCATCATAGGGAGTATCCAC+TGG | 0.521258 | 3.3:+58248796 | None:intergenic |
| CAGCAGAGTCTCAGAAAACA+AGG | 0.523143 | 3.3:-58245724 | MS.gene049698:CDS |
| CTTGCCAGATACCGGCGGAC+AGG | 0.524415 | 3.3:-58248488 | MS.gene049698:intron |
| TAGACAGTTTGGTCAGCTCC+AGG | 0.525465 | 3.3:+58246874 | None:intergenic |
| AGTCCATTTCCAATTGAAGA+AGG | 0.532379 | 3.3:+58249217 | None:intergenic |
| AGTGAATAATGAACCAAAAG+TGG | 0.533551 | 3.3:-58245928 | MS.gene049698:CDS |
| TGATCCTTCTACCTTTCTCA+AGG | 0.533869 | 3.3:+58250081 | None:intergenic |
| CTTGGTTCAAAATCATCATA+GGG | 0.534597 | 3.3:+58248784 | None:intergenic |
| AACTAAGATTCTCAACCTCA+TGG | 0.538311 | 3.3:-58247557 | MS.gene049698:CDS |
| ATTTCATGGCTTCTGCATCA+GGG | 0.540993 | 3.3:-58250199 | None:intergenic |
| CTTGATTCGTCTCCATTGAG+AGG | 0.541337 | 3.3:+58246213 | None:intergenic |
| TTATAGGAAATTACACTGAT+GGG | 0.541486 | 3.3:-58247516 | MS.gene049698:CDS |
| TGAGTAAACCTCTCAAGATA+AGG | 0.545448 | 3.3:+58247726 | None:intergenic |
| TGGAACATGATTTCAGCGGC+AGG | 0.548654 | 3.3:-58246141 | MS.gene049698:CDS |
| CCAAATGCTTCATACAAAGC+AGG | 0.548728 | 3.3:+58246342 | None:intergenic |
| TTATCTTGAGAGGTTTACTC+AGG | 0.550480 | 3.3:-58247724 | MS.gene049698:intron |
| ACATCTATCCTTATCTTGAG+AGG | 0.550919 | 3.3:-58247734 | MS.gene049698:CDS |
| GATAGGAATCAAATATTGGA+AGG | 0.559030 | 3.3:-58250005 | MS.gene049698:CDS |
| ATGAAGATTCAGATGTCAAG+TGG | 0.562035 | 3.3:-58247273 | MS.gene049698:CDS |
| ACATAACCGGTTTAGTCGAA+TGG | 0.563404 | 3.3:-58246599 | MS.gene049698:CDS |
| GATTGCAGCGTATTAATGAA+TGG | 0.564848 | 3.3:-58246119 | MS.gene049698:intron |
| AAGTTCAACATAGCTGCACC+TGG | 0.564919 | 3.3:-58246892 | MS.gene049698:CDS |
| CTCAGTTGCAAAGCTTCAGA+TGG | 0.565623 | 3.3:-58248854 | MS.gene049698:CDS |
| GAGTTGGACACTGGTTGTTG+AGG | 0.566263 | 3.3:+58245751 | None:intergenic |
| CATATGATACCTACTCTGCT+TGG | 0.567145 | 3.3:+58250124 | None:intergenic |
| CTATAATCTTCTCAATGGCA+AGG | 0.572371 | 3.3:-58246638 | MS.gene049698:CDS |
| ATAAATCTTCAATTGTAGGA+TGG | 0.578371 | 3.3:+58246812 | None:intergenic |
| AAGATTCTCAACCTCATGGA+AGG | 0.580091 | 3.3:-58247553 | MS.gene049698:CDS |
| AGGGTCTGGCCTTACTGCAA+AGG | 0.580872 | 3.3:+58249533 | None:intergenic |
| TAGAAATGTTACCTGTCCGC+CGG | 0.582278 | 3.3:+58248477 | None:intergenic |
| CCATGGTTAGTAGCAAAAGT+TGG | 0.583413 | 3.3:+58246285 | None:intergenic |
| AAACAACTCTGCATAGTCCT+GGG | 0.585010 | 3.3:+58246938 | None:intergenic |
| TCGATTTATTGCCGACACAA+AGG | 0.585397 | 3.3:-58246379 | MS.gene049698:CDS |
| CCATCAACAGTAATTTCCGC+TGG | 0.588157 | 3.3:+58246258 | None:intergenic |
| ACCGGTTTAGTCGAATGGTA+TGG | 0.588404 | 3.3:-58246594 | MS.gene049698:CDS |
| TCAGAAAACAAGGAACAAGC+AGG | 0.590337 | 3.3:-58245714 | MS.gene049698:intron |
| AAGCTTTGCAACTGAGCTCA+GGG | 0.590368 | 3.3:+58248861 | None:intergenic |
| CATGCAGCATTTACACTCCC+AGG | 0.590865 | 3.3:-58246955 | MS.gene049698:CDS |
| ACTGCAAAGGCAACATATGG+TGG | 0.591779 | 3.3:+58249546 | None:intergenic |
| CAGATGCATCCAAGCAGAGT+AGG | 0.592157 | 3.3:-58250133 | MS.gene049698:CDS |
| TTGTTATCACTAAATCATCA+AGG | 0.594692 | 3.3:-58249121 | MS.gene049698:CDS |
| AGCTCCAGATCCAATGAACA+TGG | 0.595996 | 3.3:-58248596 | MS.gene049698:CDS |
| GTTTGCAGCAAAGATAAACC+TGG | 0.596368 | 3.3:-58246991 | MS.gene049698:intron |
| AGTGGATGGGGAGATACTGC+AGG | 0.599037 | 3.3:-58248661 | MS.gene049698:CDS |
| AGATACTGCAGGAAGAGTGA+AGG | 0.602197 | 3.3:-58248650 | MS.gene049698:CDS |
| AGAGTAGGTATCATATGAAG+AGG | 0.603076 | 3.3:-58250118 | MS.gene049698:CDS |
| AGCGAGAAACCCATTGACGC+AGG | 0.603079 | 3.3:+58247760 | None:intergenic |
| TTACATATTCCCAAACTCCA+GGG | 0.604096 | 3.3:+58249514 | None:intergenic |
| CGTTCAAGGTCCAGATCACA+GGG | 0.611161 | 3.3:-58245518 | MS.gene049698:CDS |
| TTTGCAGTAAGGCCAGACCC+TGG | 0.611570 | 3.3:-58249531 | MS.gene049698:CDS |
| GTAAAGTGGATTCGACACAT+TGG | 0.612673 | 3.3:-58246161 | MS.gene049698:CDS |
| AGTGAATCCTCAAATTCTTG+TGG | 0.613261 | 3.3:-58247999 | MS.gene049698:intron |
| GGTGCAGCTATGTTGAACTT+CGG | 0.617054 | 3.3:+58246895 | None:intergenic |
| TCATTCATAGGTTTAAGCAG+TGG | 0.617554 | 3.3:-58248693 | MS.gene049698:intron |
| TACTAACCATGGTGGTCCAG+CGG | 0.618133 | 3.3:-58246274 | MS.gene049698:CDS |
| TATCCACTGGAAGTGCTGAA+AGG | 0.620301 | 3.3:+58248809 | None:intergenic |
| AGGCTCATACCTGATGCTCA+AGG | 0.620828 | 3.3:-58247870 | MS.gene049698:CDS |
| GACATGAGAAGTGATACTTA+GGG | 0.623045 | 3.3:+58247239 | None:intergenic |
| CACAAAAGCTCCCTTTGTGT+CGG | 0.624836 | 3.3:+58246368 | None:intergenic |
| GCTTCAGATGGCACTAACAG+TGG | 0.628405 | 3.3:-58248842 | MS.gene049698:CDS |
| TAGCAAACTTAGGATAACTC+AGG | 0.631639 | 3.3:-58247470 | MS.gene049698:intron |
| CTACTTAGAATTAAGCAACA+AGG | 0.635085 | 3.3:-58248028 | MS.gene049698:CDS |
| CTTGGCTTGCCAGATACCGG+CGG | 0.648157 | 3.3:-58248493 | MS.gene049698:CDS |
| ATACAGTAAAGTTGATAACA+AGG | 0.652323 | 3.3:-58246788 | MS.gene049698:CDS |
| CATATCAGGAAATTGCTGGA+AGG | 0.653215 | 3.3:-58247162 | MS.gene049698:intron |
| ATTCCTTTCAGCACTTCCAG+TGG | 0.655307 | 3.3:-58248812 | MS.gene049698:CDS |
| ACATTGGAACATGATTTCAG+CGG | 0.663048 | 3.3:-58246145 | MS.gene049698:CDS |
| GTTGACAATGATAGGTCACA+AGG | 0.672933 | 3.3:-58247890 | MS.gene049698:intron |
| ATTCATAGGTTTAAGCAGTG+GGG | 0.679591 | 3.3:-58248691 | MS.gene049698:intron |
| GAGGTTGAGAATCTTAGTTG+TGG | 0.682574 | 3.3:+58247561 | None:intergenic |
| CAGACCGATAGACATCGCAA+TGG | 0.696451 | 3.3:-58246411 | MS.gene049698:CDS |
| TAATTTCCGCTGGACCACCA+TGG | 0.697345 | 3.3:+58246268 | None:intergenic |
| GTCATTGAAGCAATGAACTG+TGG | 0.698242 | 3.3:-58246312 | MS.gene049698:CDS |
| AGAAGCCTCCAACTATGACA+AGG | 0.698799 | 3.3:+58246541 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAAGAAAAATAGTAGA+TGG | - | chr3.3:58245967-58245986 | MS.gene049698:CDS | 15.0% |
| !! | TATAATAAATCTTCAATTGT+AGG | + | chr3.3:58248903-58248922 | None:intergenic | 15.0% |
| !! | AGCAAAAAAAAAATGCAAAT+TGG | + | chr3.3:58245776-58245795 | None:intergenic | 20.0% |
| !! | CAAGTTTATTATGTATAGAA+AGG | + | chr3.3:58247762-58247781 | None:intergenic | 20.0% |
| !! | CATAGGCTTATTAATTAATA+TGG | - | chr3.3:58246108-58246127 | MS.gene049698:intron | 20.0% |
| !! | CTATAAACTAATTTACATTG+TGG | - | chr3.3:58245794-58245813 | MS.gene049698:intron | 20.0% |
| !! | TAAACCTATGAATGAAAAAT+AGG | + | chr3.3:58247010-58247029 | None:intergenic | 20.0% |
| !! | TAACCTTATGTTTAAGAATT+TGG | - | chr3.3:58249831-58249850 | MS.gene049698:intron | 20.0% |
| !! | TTAAATAAATTTAGACAACG+TGG | + | chr3.3:58245933-58245952 | None:intergenic | 20.0% |
| !!! | AAAAGTACAGTATAAGTAAA+AGG | + | chr3.3:58246314-58246333 | None:intergenic | 20.0% |
| !!! | AAATTGAAGAAACTTTGAAA+AGG | - | chr3.3:58248659-58248678 | MS.gene049698:CDS | 20.0% |
| !!! | AATTGAAAAGTATCAATTGA+AGG | - | chr3.3:58249251-58249270 | MS.gene049698:CDS | 20.0% |
| !!! | ACAATTTTTAATGGTTAACT+TGG | - | chr3.3:58246385-58246404 | MS.gene049698:CDS | 20.0% |
| !!! | ACTATTCTTTTATTGAAACT+TGG | - | chr3.3:58248263-58248282 | MS.gene049698:intron | 20.0% |
| !!! | ATTGAAAAGTATCAATTGAA+GGG | - | chr3.3:58249252-58249271 | MS.gene049698:CDS | 20.0% |
| !!! | CAAATATATCTAAAGCAATA+TGG | + | chr3.3:58245998-58246017 | None:intergenic | 20.0% |
| !!! | CAATTTTTAATGGTTAACTT+GGG | - | chr3.3:58246386-58246405 | MS.gene049698:CDS | 20.0% |
| !!! | CATATTGCTTTAGATATATT+TGG | - | chr3.3:58245996-58246015 | MS.gene049698:CDS | 20.0% |
| !!! | CTATTCTTTTATTGAAACTT+GGG | - | chr3.3:58248264-58248283 | MS.gene049698:intron | 20.0% |
| !!! | GATTAGACAACAATTTTTAA+TGG | - | chr3.3:58246376-58246395 | MS.gene049698:CDS | 20.0% |
| !!! | GTAATTTTGTAATGTACTTT+TGG | - | chr3.3:58246770-58246789 | MS.gene049698:intron | 20.0% |
| !!! | TTAAGAACTTTGAAACAAAA+TGG | + | chr3.3:58246517-58246536 | None:intergenic | 20.0% |
| !!! | TTTCTTTGAAAAATGTAAAG+TGG | - | chr3.3:58249533-58249552 | MS.gene049698:CDS | 20.0% |
| ! | AAAACCTATAATCTTCTCAA+TGG | - | chr3.3:58249065-58249084 | MS.gene049698:intron | 25.0% |
| ! | AAAGAATATACGACCAAAAA+TGG | - | chr3.3:58246280-58246299 | MS.gene049698:CDS | 25.0% |
| ! | ATAAATCTTCAATTGTAGGA+TGG | + | chr3.3:58248899-58248918 | None:intergenic | 25.0% |
| ! | ATATTCTTTCCTTGAATTTG+AGG | + | chr3.3:58246269-58246288 | None:intergenic | 25.0% |
| ! | ATATTTGATTCCTATCATTC+TGG | + | chr3.3:58245699-58245718 | None:intergenic | 25.0% |
| ! | ATCACAACATTGAATATTGT+GGG | + | chr3.3:58247158-58247177 | None:intergenic | 25.0% |
| ! | ATTAGTTCATGCATCAAAAA+AGG | + | chr3.3:58248358-58248377 | None:intergenic | 25.0% |
| ! | ATTATAGGAAATTACACTGA+TGG | - | chr3.3:58248191-58248210 | MS.gene049698:intron | 25.0% |
| ! | CAGAATTAATTCTACACATT+TGG | + | chr3.3:58247321-58247340 | None:intergenic | 25.0% |
| ! | CATAAAAGTTCATGATTTGA+TGG | - | chr3.3:58245648-58245667 | MS.gene049698:intron | 25.0% |
| ! | CATCTAGTTAGAATCAATTA+TGG | + | chr3.3:58247382-58247401 | None:intergenic | 25.0% |
| ! | GAATGATAGGAATCAAATAT+TGG | - | chr3.3:58245699-58245718 | MS.gene049698:intron | 25.0% |
| ! | GTTATATGTCATTGTTTCAT+AGG | - | chr3.3:58246091-58246110 | MS.gene049698:intron | 25.0% |
| ! | TAACATCAACAACAAAAGAA+TGG | + | chr3.3:58248969-58248988 | None:intergenic | 25.0% |
| ! | TAATTTACATTGTGGAAAGA+CGG | - | chr3.3:58245802-58245821 | MS.gene049698:intron | 25.0% |
| ! | TAATTTCCTATAATGAGATC+TGG | + | chr3.3:58248185-58248204 | None:intergenic | 25.0% |
| ! | TATATGTTGTTGACAATGAT+AGG | - | chr3.3:58247810-58247829 | MS.gene049698:CDS | 25.0% |
| ! | TCACCAAATTCTTAAACATA+AGG | + | chr3.3:58249837-58249856 | None:intergenic | 25.0% |
| ! | TGAAAGTAATGTGATATGTT+TGG | + | chr3.3:58247484-58247503 | None:intergenic | 25.0% |
| ! | TGTTGTCTAATCATTGAAAA+AGG | + | chr3.3:58246368-58246387 | None:intergenic | 25.0% |
| ! | TTAAAATTGCCTTCTTCAAT+TGG | - | chr3.3:58246482-58246501 | MS.gene049698:CDS | 25.0% |
| ! | TTATAGGAAATTACACTGAT+GGG | - | chr3.3:58248192-58248211 | MS.gene049698:intron | 25.0% |
| ! | TTCTTATATGTAAATGTCAC+AGG | - | chr3.3:58249905-58249924 | MS.gene049698:intron | 25.0% |
| ! | TTGTTATCACTAAATCATCA+AGG | - | chr3.3:58246587-58246606 | MS.gene049698:CDS | 25.0% |
| !! | TATATCTAAAGCAATATGGT+CGG | + | chr3.3:58245994-58246013 | None:intergenic | 25.0% |
| !! | TGATTAATTTTCTCTTACAG+TGG | - | chr3.3:58249024-58249043 | MS.gene049698:intron | 25.0% |
| !! | TTCTCTATTCATGGTTATTT+TGG | - | chr3.3:58247179-58247198 | MS.gene049698:CDS | 25.0% |
| !! | TTCTTAACTTTACGTTTTAG+TGG | - | chr3.3:58246530-58246549 | MS.gene049698:CDS | 25.0% |
| !!! | ATACAGTAAAGTTGATAACA+AGG | - | chr3.3:58248920-58248939 | MS.gene049698:intron | 25.0% |
| !!! | ATCTTTTATGTCATTTGAAC+TGG | - | chr3.3:58246802-58246821 | MS.gene049698:CDS | 25.0% |
| !!! | CAATCCTATTTTTCATTCAT+AGG | - | chr3.3:58247003-58247022 | MS.gene049698:intron | 25.0% |
| !!! | CTTTTGTTTTCAGTTATACA+TGG | - | chr3.3:58249701-58249720 | MS.gene049698:intron | 25.0% |
| !!! | TCTTAACTTTACGTTTTAGT+GGG | - | chr3.3:58246531-58246550 | MS.gene049698:CDS | 25.0% |
| AAAAACTTCTCCATGTTCAT+TGG | + | chr3.3:58247125-58247144 | None:intergenic | 30.0% | |
| AAACATACCACAAGAATTTG+AGG | + | chr3.3:58247719-58247738 | None:intergenic | 30.0% | |
| AAATTACACTGATGGGAATT+TGG | - | chr3.3:58248199-58248218 | MS.gene049698:intron | 30.0% | |
| AACATTGAATCAAGATTGCA+TGG | - | chr3.3:58249678-58249697 | MS.gene049698:intron | 30.0% | |
| AATTTACATTGTGGAAAGAC+GGG | - | chr3.3:58245803-58245822 | MS.gene049698:intron | 30.0% | |
| AGAAATGGAGCAAGTTATAA+AGG | - | chr3.3:58245672-58245691 | MS.gene049698:intron | 30.0% | |
| AGTGAATAATGAACCAAAAG+TGG | - | chr3.3:58249780-58249799 | MS.gene049698:intron | 30.0% | |
| ATCCTACATTTGATGAGATA+TGG | - | chr3.3:58248043-58248062 | MS.gene049698:CDS | 30.0% | |
| CGACAAAAAATACTGATAGA+CGG | + | chr3.3:58245840-58245859 | None:intergenic | 30.0% | |
| CTACTTAGAATTAAGCAACA+AGG | - | chr3.3:58247680-58247699 | MS.gene049698:intron | 30.0% | |
| CTTGGTTCAAAATCATCATA+GGG | + | chr3.3:58246927-58246946 | None:intergenic | 30.0% | |
| GACAAAAAATACTGATAGAC+GGG | + | chr3.3:58245839-58245858 | None:intergenic | 30.0% | |
| GATAACAAGTAGTCCAATAT+AGG | + | chr3.3:58246575-58246594 | None:intergenic | 30.0% | |
| GATAGGAATCAAATATTGGA+AGG | - | chr3.3:58245703-58245722 | MS.gene049698:intron | 30.0% | |
| GATCACAACATTGAATATTG+TGG | + | chr3.3:58247159-58247178 | None:intergenic | 30.0% | |
| GATGCATGAACTAATAAATG+AGG | - | chr3.3:58248363-58248382 | MS.gene049698:intron | 30.0% | |
| GGTCACAAAAATTGTTGAAT+AGG | + | chr3.3:58248325-58248344 | None:intergenic | 30.0% | |
| GTCAAAATTTCTCGATTGAT+TGG | + | chr3.3:58250028-58250047 | None:intergenic | 30.0% | |
| GTGAAAATGCGTTTATAAGT+TGG | - | chr3.3:58248067-58248086 | MS.gene049698:CDS | 30.0% | |
| TAACTTGGGTTTATGTTGTA+GGG | - | chr3.3:58246400-58246419 | MS.gene049698:CDS | 30.0% | |
| TCATGATTTGATGGAAGAAA+TGG | - | chr3.3:58245657-58245676 | MS.gene049698:intron | 30.0% | |
| TGAACAGGTAGTTTACATAT+TGG | - | chr3.3:58247628-58247647 | MS.gene049698:intron | 30.0% | |
| TGTAAGGAAAATAGACAGTT+TGG | + | chr3.3:58248848-58248867 | None:intergenic | 30.0% | |
| TTATAAAGGACCAGAATGAT+AGG | - | chr3.3:58245686-58245705 | MS.gene049698:intron | 30.0% | |
| TTGGATGCATTCACTTAAAA+GGG | + | chr3.3:58247465-58247484 | None:intergenic | 30.0% | |
| TTTGGATGCATTCACTTAAA+AGG | + | chr3.3:58247466-58247485 | None:intergenic | 30.0% | |
| ! | AAAATGCGTTTATAAGTTGG+AGG | - | chr3.3:58248070-58248089 | MS.gene049698:CDS | 30.0% |
| ! | AAAGGACATAGTACCATTTT+TGG | + | chr3.3:58246296-58246315 | None:intergenic | 30.0% |
| ! | AACAATTTTTGTGACCCTTA+AGG | - | chr3.3:58248329-58248348 | MS.gene049698:intron | 30.0% |
| ! | AATTGATTCTAACTAGATGC+TGG | - | chr3.3:58247383-58247402 | MS.gene049698:intron | 30.0% |
| ! | ATGTGATGAGAATTTGAGAT+AGG | - | chr3.3:58249876-58249895 | MS.gene049698:intron | 30.0% |
| ! | CTAATCTAGAGCTAGTAAAT+TGG | + | chr3.3:58249630-58249649 | None:intergenic | 30.0% |
| ! | CTTCTTACTAAGTTTTACAC+AGG | - | chr3.3:58245735-58245754 | MS.gene049698:CDS | 30.0% |
| ! | TTAACTTGGGTTTATGTTGT+AGG | - | chr3.3:58246399-58246418 | MS.gene049698:CDS | 30.0% |
| ! | TTCCTTGAATTTGAGGTAAT+CGG | + | chr3.3:58246262-58246281 | None:intergenic | 30.0% |
| ! | TTCTCTTATGACTAGTTCTT+CGG | - | chr3.3:58248108-58248127 | MS.gene049698:intron | 30.0% |
| !! | AATTTTGCCTCCTCTAAAAA+TGG | + | chr3.3:58247294-58247313 | None:intergenic | 30.0% |
| !! | ATATGGATTTTAATGCTTGC+AGG | - | chr3.3:58246125-58246144 | MS.gene049698:CDS | 30.0% |
| !! | ATCAAAAAAGGCATCCTTAA+GGG | + | chr3.3:58248346-58248365 | None:intergenic | 30.0% |
| !! | ATCACTGATTTCCAAAACAT+TGG | + | chr3.3:58246675-58246694 | None:intergenic | 30.0% |
| !! | GAAGCATTTATACTTTTTGG+AGG | - | chr3.3:58249755-58249774 | MS.gene049698:intron | 30.0% |
| !! | GTACGTCATGTTCTAAAAAT+TGG | + | chr3.3:58246742-58246761 | None:intergenic | 30.0% |
| !! | TTTACGTTTTAGTGGGAAAT+TGG | - | chr3.3:58246538-58246557 | MS.gene049698:CDS | 30.0% |
| !!! | GAAGAAGGCAATTTTAAGTT+AGG | + | chr3.3:58246479-58246498 | None:intergenic | 30.0% |
| !!! | GGCAATTTTAAGTTAGGAAT+AGG | + | chr3.3:58246473-58246492 | None:intergenic | 30.0% |
| !!! | TCTCTGTCTTTTGATTTCAA+AGG | + | chr3.3:58249198-58249217 | None:intergenic | 30.0% |
| !!! | TGGGAAGCATTTATACTTTT+TGG | - | chr3.3:58249752-58249771 | MS.gene049698:intron | 30.0% |
| AACCAAATGCAATCAGGAAT+TGG | - | chr3.3:58247861-58247880 | MS.gene049698:CDS | 35.0% | |
| AACCGATTACCTCAAATTCA+AGG | - | chr3.3:58246257-58246276 | MS.gene049698:CDS | 35.0% | |
| AACTAAGATTCTCAACCTCA+TGG | - | chr3.3:58248151-58248170 | MS.gene049698:intron | 35.0% | |
| AAGCACATGCTAAATGAATG+TGG | - | chr3.3:58247574-58247593 | MS.gene049698:intron | 35.0% | |
| AAGTGCAAAGAGATTTACCT+TGG | + | chr3.3:58246945-58246964 | None:intergenic | 35.0% | |
| AATACCTTGAGAAAGGTAGA+AGG | - | chr3.3:58245623-58245642 | MS.gene049698:intron | 35.0% | |
| AATGGTATGGCAAGAACAAA+AGG | - | chr3.3:58249127-58249146 | MS.gene049698:CDS | 35.0% | |
| AATTGAAGGGTCAGTTTAGA+TGG | - | chr3.3:58249265-58249284 | MS.gene049698:CDS | 35.0% | |
| ACATCTATCCTTATCTTGAG+AGG | - | chr3.3:58247974-58247993 | MS.gene049698:intron | 35.0% | |
| ACATTCATTTAGCATGTGCT+TGG | + | chr3.3:58247575-58247594 | None:intergenic | 35.0% | |
| ACATTGGAACATGATTTCAG+CGG | - | chr3.3:58249563-58249582 | MS.gene049698:CDS | 35.0% | |
| AGAGTAGGTATCATATGAAG+AGG | - | chr3.3:58245590-58245609 | MS.gene049698:intron | 35.0% | |
| AGTCCATTTCCAATTGAAGA+AGG | + | chr3.3:58246494-58246513 | None:intergenic | 35.0% | |
| AGTGAATCCTCAAATTCTTG+TGG | - | chr3.3:58247709-58247728 | MS.gene049698:intron | 35.0% | |
| AGTTCTTCGGTTCATGTTAT+AGG | - | chr3.3:58248121-58248140 | MS.gene049698:intron | 35.0% | |
| ATCAAAAGACAGAGAAGAGA+TGG | - | chr3.3:58249203-58249222 | MS.gene049698:CDS | 35.0% | |
| ATGAAGATTCAGATGTCAAG+TGG | - | chr3.3:58248435-58248454 | MS.gene049698:intron | 35.0% | |
| ATTCATAGGTTTAAGCAGTG+GGG | - | chr3.3:58247017-58247036 | MS.gene049698:intron | 35.0% | |
| ATTCCTTTATCCGTCTGAAA+AGG | + | chr3.3:58247928-58247947 | None:intergenic | 35.0% | |
| CAAATATTGGAAGGCAATCT+TGG | - | chr3.3:58245712-58245731 | MS.gene049698:intron | 35.0% | |
| CAGCGTATTAATGAATGGTA+AGG | - | chr3.3:58249594-58249613 | MS.gene049698:intron | 35.0% | |
| CATCATAACTAGCACATATC+AGG | - | chr3.3:58248532-58248551 | MS.gene049698:CDS | 35.0% | |
| CATTCATAGGTTTAAGCAGT+GGG | - | chr3.3:58247016-58247035 | MS.gene049698:intron | 35.0% | |
| CCTTGGTTCAAAATCATCAT+AGG | + | chr3.3:58246928-58246947 | None:intergenic | 35.0% | |
| CTATAATCTTCTCAATGGCA+AGG | - | chr3.3:58249070-58249089 | MS.gene049698:intron | 35.0% | |
| CTTGCCATTGAGAAGATTAT+AGG | + | chr3.3:58249072-58249091 | None:intergenic | 35.0% | |
| GACATGAGAAGTGATACTTA+GGG | + | chr3.3:58248472-58248491 | None:intergenic | 35.0% | |
| GATGTTGTGAAGAACATAAC+CGG | - | chr3.3:58249096-58249115 | MS.gene049698:intron | 35.0% | |
| GATTGCAGCGTATTAATGAA+TGG | - | chr3.3:58249589-58249608 | MS.gene049698:intron | 35.0% | |
| GCAAACAAGTTGCTGAATAT+GGG | - | chr3.3:58249733-58249752 | MS.gene049698:intron | 35.0% | |
| GGAAAACCAGATCTCATTAT+AGG | - | chr3.3:58248176-58248195 | MS.gene049698:intron | 35.0% | |
| GTTATGGTTCAATCACAGTT+CGG | - | chr3.3:58246715-58246734 | MS.gene049698:intron | 35.0% | |
| GTTGTGATCTTCTCTATTCA+TGG | - | chr3.3:58247170-58247189 | MS.gene049698:CDS | 35.0% | |
| TAGCAAACTTAGGATAACTC+AGG | - | chr3.3:58248238-58248257 | MS.gene049698:intron | 35.0% | |
| TCACTTCTCATGTCAATTCA+TGG | - | chr3.3:58248478-58248497 | MS.gene049698:intron | 35.0% | |
| TCATTCATAGGTTTAAGCAG+TGG | - | chr3.3:58247015-58247034 | MS.gene049698:intron | 35.0% | |
| TCTCTTTGCACTTCATAAAG+TGG | - | chr3.3:58246952-58246971 | MS.gene049698:CDS | 35.0% | |
| TGACATGAGAAGTGATACTT+AGG | + | chr3.3:58248473-58248492 | None:intergenic | 35.0% | |
| TGAGTAAACCTCTCAAGATA+AGG | + | chr3.3:58247985-58248004 | None:intergenic | 35.0% | |
| TGCAAACAAGTTGCTGAATA+TGG | - | chr3.3:58249732-58249751 | MS.gene049698:intron | 35.0% | |
| TGGATGCATTCACTTAAAAG+GGG | + | chr3.3:58247464-58247483 | None:intergenic | 35.0% | |
| TGGCAAAGCAAAGATACATT+TGG | - | chr3.3:58249800-58249819 | MS.gene049698:intron | 35.0% | |
| TTACATATTCCCAAACTCCA+GGG | + | chr3.3:58246197-58246216 | None:intergenic | 35.0% | |
| TTATCTTGAGAGGTTTACTC+AGG | - | chr3.3:58247984-58248003 | MS.gene049698:intron | 35.0% | |
| TTCCAATTCCTGATTGCATT+TGG | + | chr3.3:58247866-58247885 | None:intergenic | 35.0% | |
| TTGCCTTCTTCAATTGGAAA+TGG | - | chr3.3:58246488-58246507 | MS.gene049698:CDS | 35.0% | |
| TTTACATATTCCCAAACTCC+AGG | + | chr3.3:58246198-58246217 | None:intergenic | 35.0% | |
| TTTGCCAAATACCTTGAGAA+AGG | - | chr3.3:58245616-58245635 | MS.gene049698:intron | 35.0% | |
| ! | AATGCACTTGAAGCAGATTT+TGG | - | chr3.3:58246434-58246453 | MS.gene049698:CDS | 35.0% |
| ! | ACACATGTACACCAATGTTT+TGG | - | chr3.3:58246661-58246680 | MS.gene049698:CDS | 35.0% |
| ! | AGGTAATCGGTTGATGTTAT+AGG | + | chr3.3:58246249-58246268 | None:intergenic | 35.0% |
| ! | CCTATGATGATTTTGAACCA+AGG | - | chr3.3:58246925-58246944 | MS.gene049698:CDS | 35.0% |
| ! | CTTTTGTCTTTCTCAGTGTA+AGG | + | chr3.3:58248864-58248883 | None:intergenic | 35.0% |
| ! | GCTTTTCTACAATCTTGAAC+AGG | - | chr3.3:58247613-58247632 | MS.gene049698:intron | 35.0% |
| ! | TCTACCTTTCTCAAGGTATT+TGG | + | chr3.3:58245623-58245642 | None:intergenic | 35.0% |
| !! | ATTACTGTTGATGGTGTTTC+TGG | - | chr3.3:58249459-58249478 | MS.gene049698:CDS | 35.0% |
| !! | CATCAAAAAAGGCATCCTTA+AGG | + | chr3.3:58248347-58248366 | None:intergenic | 35.0% |
| !! | CTTAGTTCCATTTTTAGAGG+AGG | - | chr3.3:58247284-58247303 | MS.gene049698:CDS | 35.0% |
| !! | GTGCTTAGTTCCATTTTTAG+AGG | - | chr3.3:58247281-58247300 | MS.gene049698:CDS | 35.0% |
| !!! | TATCTTTGCTTTGCCACTTT+TGG | + | chr3.3:58249796-58249815 | None:intergenic | 35.0% |
| AAACAACTCTGCATAGTCCT+GGG | + | chr3.3:58248773-58248792 | None:intergenic | 40.0% | |
| AAGATTCTCAACCTCATGGA+AGG | - | chr3.3:58248155-58248174 | MS.gene049698:intron | 40.0% | |
| AATGAGGTTGCTTGAAAACC+AGG | - | chr3.3:58248379-58248398 | MS.gene049698:intron | 40.0% | |
| AGCACATATCAGGAAATTGC+TGG | - | chr3.3:58248542-58248561 | MS.gene049698:CDS | 40.0% | |
| ATAAAGGAATCCTGCGTCAA+TGG | - | chr3.3:58247938-58247957 | MS.gene049698:intron | 40.0% | |
| ATGAGGTTGCTTGAAAACCA+GGG | - | chr3.3:58248380-58248399 | MS.gene049698:intron | 40.0% | |
| ATTGGATCAAGTGAGAGCTT+TGG | - | chr3.3:58247646-58247665 | MS.gene049698:intron | 40.0% | |
| CATATCAGGAAATTGCTGGA+AGG | - | chr3.3:58248546-58248565 | MS.gene049698:CDS | 40.0% | |
| CATATGATACCTACTCTGCT+TGG | + | chr3.3:58245587-58245606 | None:intergenic | 40.0% | |
| CATATGTTGCCTTTGCAGTA+AGG | - | chr3.3:58246166-58246185 | MS.gene049698:CDS | 40.0% | |
| CCAAATGCTTCATACAAAGC+AGG | + | chr3.3:58249369-58249388 | None:intergenic | 40.0% | |
| CCATGGTTAGTAGCAAAAGT+TGG | + | chr3.3:58249426-58249445 | None:intergenic | 40.0% | |
| CCTGCAGTAGCAAAACAATA+GGG | + | chr3.3:58250170-58250189 | None:intergenic | 40.0% | |
| CGATTTATTGCCGACACAAA+GGG | - | chr3.3:58249330-58249349 | MS.gene049698:intron | 40.0% | |
| CGCCATATCTCATCAAATGT+AGG | + | chr3.3:58248048-58248067 | None:intergenic | 40.0% | |
| CTCTTATGGCTAGCAAACTT+AGG | - | chr3.3:58248228-58248247 | MS.gene049698:intron | 40.0% | |
| CTTACTGCAAAGGCAACATA+TGG | + | chr3.3:58246168-58246187 | None:intergenic | 40.0% | |
| GAACAAAAGGTTGAGAAGCT+TGG | - | chr3.3:58249140-58249159 | MS.gene049698:CDS | 40.0% | |
| GAATTTGGCAGCTTCTCTTA+TGG | - | chr3.3:58248214-58248233 | MS.gene049698:intron | 40.0% | |
| GAGAAGAGATGGCAGAAATA+AGG | - | chr3.3:58249214-58249233 | MS.gene049698:CDS | 40.0% | |
| GAGGTTGAGAATCTTAGTTG+TGG | + | chr3.3:58248150-58248169 | None:intergenic | 40.0% | |
| GCATGACTTTCATATTGTCC+AGG | + | chr3.3:58248738-58248757 | None:intergenic | 40.0% | |
| GGCAAAGACACAACCTATAT+TGG | - | chr3.3:58246559-58246578 | MS.gene049698:CDS | 40.0% | |
| GGTTGTTGAGGTTCATCAAT+TGG | + | chr3.3:58249948-58249967 | None:intergenic | 40.0% | |
| GTCATTGAAGCAATGAACTG+TGG | - | chr3.3:58249396-58249415 | MS.gene049698:intron | 40.0% | |
| GTTGACAATGATAGGTCACA+AGG | - | chr3.3:58247818-58247837 | MS.gene049698:CDS | 40.0% | |
| GTTTGCAGCAAAGATAAACC+TGG | - | chr3.3:58248717-58248736 | MS.gene049698:intron | 40.0% | |
| TAAAGGAATCCTGCGTCAAT+GGG | - | chr3.3:58247939-58247958 | MS.gene049698:intron | 40.0% | |
| TCAAGGAACCAAATGCAATC+AGG | - | chr3.3:58247855-58247874 | MS.gene049698:CDS | 40.0% | |
| TCAGAAAACAAGGAACAAGC+AGG | - | chr3.3:58249994-58250013 | MS.gene049698:CDS | 40.0% | |
| TCAGAGAGACTTCTGAGTTA+TGG | - | chr3.3:58246699-58246718 | MS.gene049698:intron | 40.0% | |
| TCGATTTATTGCCGACACAA+AGG | - | chr3.3:58249329-58249348 | MS.gene049698:intron | 40.0% | |
| TGATCCTTCTACCTTTCTCA+AGG | + | chr3.3:58245630-58245649 | None:intergenic | 40.0% | |
| TTCCATATCGATCCTCTCAA+TGG | - | chr3.3:58249483-58249502 | MS.gene049698:CDS | 40.0% | |
| TTCTCCATGTTCATTGGATC+TGG | + | chr3.3:58247119-58247138 | None:intergenic | 40.0% | |
| TTGGTGAACCTTGTCATAGT+TGG | - | chr3.3:58249159-58249178 | MS.gene049698:CDS | 40.0% | |
| TTTGGTCAAGCAGATGTTCT+TGG | - | chr3.3:58247197-58247216 | MS.gene049698:CDS | 40.0% | |
| ! | ACATAACCGGTTTAGTCGAA+TGG | - | chr3.3:58249109-58249128 | MS.gene049698:intron | 40.0% |
| ! | ACTTTTGCTACTAACCATGG+TGG | - | chr3.3:58249426-58249445 | MS.gene049698:intron | 40.0% |
| ! | CCAACTTTTGCTACTAACCA+TGG | - | chr3.3:58249423-58249442 | MS.gene049698:intron | 40.0% |
| ! | CCTGCTTTGTATGAAGCATT+TGG | - | chr3.3:58249366-58249385 | MS.gene049698:intron | 40.0% |
| ! | GACTATGCAGAGTTGTTTCA+GGG | - | chr3.3:58248775-58248794 | MS.gene049698:intron | 40.0% |
| ! | GTAAAGTGGATTCGACACAT+TGG | - | chr3.3:58249547-58249566 | MS.gene049698:CDS | 40.0% |
| !! | TATCATCAGTGTCGACATGA+AGG | + | chr3.3:58248632-58248651 | None:intergenic | 40.0% |
| !!! | GCGTAGAATTTTTGAGTGCT+TGG | + | chr3.3:58247902-58247921 | None:intergenic | 40.0% |
| !!! | TTAGCATGTGCTTGGTTTTG+CGG | + | chr3.3:58247567-58247586 | None:intergenic | 40.0% |
| !!! | TTTTTGAGTGCTTGGTGTCA+AGG | + | chr3.3:58247894-58247913 | None:intergenic | 40.0% |
| AAGCTTTGCAACTGAGCTCA+GGG | + | chr3.3:58246850-58246869 | None:intergenic | 45.0% | |
| AAGTTCAACATAGCTGCACC+TGG | - | chr3.3:58248816-58248835 | MS.gene049698:CDS | 45.0% | |
| ACTGATAGACGGGCATGTTA+GGG | + | chr3.3:58245829-58245848 | None:intergenic | 45.0% | |
| ACTGCAAAGGCAACATATGG+TGG | + | chr3.3:58246165-58246184 | None:intergenic | 45.0% | |
| AGAAGCCTCCAACTATGACA+AGG | + | chr3.3:58249170-58249189 | None:intergenic | 45.0% | |
| AGATACTGCAGGAAGAGTGA+AGG | - | chr3.3:58247058-58247077 | MS.gene049698:intron | 45.0% | |
| AGCTCCAGATCCAATGAACA+TGG | - | chr3.3:58247112-58247131 | MS.gene049698:intron | 45.0% | |
| ATTCCTTTCAGCACTTCCAG+TGG | - | chr3.3:58246896-58246915 | MS.gene049698:CDS | 45.0% | |
| CACAAAAGCTCCCTTTGTGT+CGG | + | chr3.3:58249343-58249362 | None:intergenic | 45.0% | |
| CAGCAGAGTCTCAGAAAACA+AGG | - | chr3.3:58249984-58250003 | MS.gene049698:CDS | 45.0% | |
| CCAGCGGAAATTACTGTTGA+TGG | - | chr3.3:58249450-58249469 | MS.gene049698:CDS | 45.0% | |
| CCATCAACAGTAATTTCCGC+TGG | + | chr3.3:58249453-58249472 | None:intergenic | 45.0% | |
| CTCAGTTGCAAAGCTTCAGA+TGG | - | chr3.3:58246854-58246873 | MS.gene049698:CDS | 45.0% | |
| CTCCATTGAGAGGATCGATA+TGG | + | chr3.3:58249488-58249507 | None:intergenic | 45.0% | |
| CTCTCCATTGCGATGTCTAT+CGG | + | chr3.3:58249304-58249323 | None:intergenic | 45.0% | |
| GAAACAACTCTGCATAGTCC+TGG | + | chr3.3:58248774-58248793 | None:intergenic | 45.0% | |
| GCCATACCATTCGACTAAAC+CGG | + | chr3.3:58249118-58249137 | None:intergenic | 45.0% | |
| GCCTGCAGTAGCAAAACAAT+AGG | + | chr3.3:58250171-58250190 | None:intergenic | 45.0% | |
| GGTGCAGCTATGTTGAACTT+CGG | + | chr3.3:58248816-58248835 | None:intergenic | 45.0% | |
| GTGAACCTTGTCATAGTTGG+AGG | - | chr3.3:58249162-58249181 | MS.gene049698:CDS | 45.0% | |
| TACTGATAGACGGGCATGTT+AGG | + | chr3.3:58245830-58245849 | None:intergenic | 45.0% | |
| TAGAAATGTTACCTGTCCGC+CGG | + | chr3.3:58247234-58247253 | None:intergenic | 45.0% | |
| ! | AAGCATGTGCTATTGTTCCC+TGG | + | chr3.3:58248400-58248419 | None:intergenic | 45.0% |
| ! | ACCGGTTTAGTCGAATGGTA+TGG | - | chr3.3:58249114-58249133 | MS.gene049698:intron | 45.0% |
| ! | CATTTGGTTCCTTGAGCATC+AGG | + | chr3.3:58247850-58247869 | None:intergenic | 45.0% |
| ! | GGACTATGCAGAGTTGTTTC+AGG | - | chr3.3:58248774-58248793 | MS.gene049698:intron | 45.0% |
| ! | GTGCCTTTTCAGACGGATAA+AGG | - | chr3.3:58247922-58247941 | MS.gene049698:intron | 45.0% |
| ! | TGTTCATTGGATCTGGAGCT+TGG | + | chr3.3:58247112-58247131 | None:intergenic | 45.0% |
| !! | CCCTATTGTTTTGCTACTGC+AGG | - | chr3.3:58250167-58250186 | MS.gene049698:CDS | 45.0% |
| !! | TATCCACTGGAAGTGCTGAA+AGG | + | chr3.3:58246902-58246921 | None:intergenic | 45.0% |
| !! | TCATCATAGGGAGTATCCAC+TGG | + | chr3.3:58246915-58246934 | None:intergenic | 45.0% |
| !!! | AAGCAGTGGGGTTTTGAAAG+TGG | - | chr3.3:58247029-58247048 | MS.gene049698:intron | 45.0% |
| !!! | AGTGGGGTTTTGAAAGTGGA+TGG | - | chr3.3:58247033-58247052 | MS.gene049698:intron | 45.0% |
| !!! | GATCTGGTTTTCCTTCCATG+AGG | + | chr3.3:58248169-58248188 | None:intergenic | 45.0% |
| !!! | GTGGGGTTTTGAAAGTGGAT+GGG | - | chr3.3:58247034-58247053 | MS.gene049698:intron | 45.0% |
| !!! | TGGGGTTTTGAAAGTGGATG+GGG | - | chr3.3:58247035-58247054 | MS.gene049698:intron | 45.0% |
| !!! | TTTTCTGAGACTCTGCTGCT+TGG | + | chr3.3:58249982-58250001 | None:intergenic | 45.0% |
| AGGCTCATACCTGATGCTCA+AGG | - | chr3.3:58247838-58247857 | MS.gene049698:CDS | 50.0% | |
| CAGACCGATAGACATCGCAA+TGG | - | chr3.3:58249297-58249316 | MS.gene049698:intron | 50.0% | |
| CAGATGCATCCAAGCAGAGT+AGG | - | chr3.3:58245575-58245594 | MS.gene049698:intron | 50.0% | |
| CATGCAGCATTTACACTCCC+AGG | - | chr3.3:58248753-58248772 | MS.gene049698:intron | 50.0% | |
| CGTTCAAGGTCCAGATCACA+GGG | - | chr3.3:58250190-58250209 | MS.gene049698:CDS | 50.0% | |
| CTACTCTGCTTGGATGCATC+TGG | + | chr3.3:58245577-58245596 | None:intergenic | 50.0% | |
| GAAGCTTTGCAACTGAGCTC+AGG | + | chr3.3:58246851-58246870 | None:intergenic | 50.0% | |
| GCTTCAGATGGCACTAACAG+TGG | - | chr3.3:58246866-58246885 | MS.gene049698:CDS | 50.0% | |
| TAATTTCCGCTGGACCACCA+TGG | + | chr3.3:58249443-58249462 | None:intergenic | 50.0% | |
| TACTAACCATGGTGGTCCAG+CGG | - | chr3.3:58249434-58249453 | MS.gene049698:CDS | 50.0% | |
| TAGACAGTTTGGTCAGCTCC+AGG | + | chr3.3:58248837-58248856 | None:intergenic | 50.0% | |
| TATTCCCAAACTCCAGGGTC+TGG | + | chr3.3:58246192-58246211 | None:intergenic | 50.0% | |
| TGGAACATGATTTCAGCGGC+AGG | - | chr3.3:58249567-58249586 | MS.gene049698:intron | 50.0% | |
| TTTGCTACTGCAGGCGTTCA+AGG | - | chr3.3:58250176-58250195 | MS.gene049698:CDS | 50.0% | |
| ! | GAGTTGGACACTGGTTGTTG+AGG | + | chr3.3:58249960-58249979 | None:intergenic | 50.0% |
| ! | TCTACGCGTGCCTTTTCAGA+CGG | - | chr3.3:58247915-58247934 | MS.gene049698:intron | 50.0% |
| !! | GAGTGCTTGGTGTCAAGGAT+TGG | + | chr3.3:58247889-58247908 | None:intergenic | 50.0% |
| !! | GTTCTTGGCTTGCCAGATAC+CGG | - | chr3.3:58247212-58247231 | MS.gene049698:CDS | 50.0% |
| AAGGCCAGACCCTGGAGTTT+GGG | - | chr3.3:58246185-58246204 | MS.gene049698:CDS | 55.0% | |
| AGCGAGAAACCCATTGACGC+AGG | + | chr3.3:58247951-58247970 | None:intergenic | 55.0% | |
| AGTGGATGGGGAGATACTGC+AGG | - | chr3.3:58247047-58247066 | MS.gene049698:intron | 55.0% | |
| GCGTTCAAGGTCCAGATCAC+AGG | - | chr3.3:58250189-58250208 | MS.gene049698:CDS | 55.0% | |
| TAAGGCCAGACCCTGGAGTT+TGG | - | chr3.3:58246184-58246203 | MS.gene049698:CDS | 55.0% | |
| TTTGCAGTAAGGCCAGACCC+TGG | - | chr3.3:58246177-58246196 | MS.gene049698:CDS | 55.0% | |
| ! | GAGACTCTGCTGCTTGGAGT+TGG | + | chr3.3:58249976-58249995 | None:intergenic | 55.0% |
| ! | TGCTGCTTGGAGTTGGACAC+TGG | + | chr3.3:58249969-58249988 | None:intergenic | 55.0% |
| !! | AGGGTCTGGCCTTACTGCAA+AGG | + | chr3.3:58246178-58246197 | None:intergenic | 55.0% |
| GTTACCTGTCCGCCGGTATC+TGG | + | chr3.3:58247227-58247246 | None:intergenic | 60.0% | |
| !! | CTTGGCTTGCCAGATACCGG+CGG | - | chr3.3:58247215-58247234 | MS.gene049698:CDS | 60.0% |
| CTTGCCAGATACCGGCGGAC+AGG | - | chr3.3:58247220-58247239 | MS.gene049698:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 58245514 | 58250216 | 58245514 | ID=MS.gene049698 |
| chr3.3 | mRNA | 58245514 | 58250216 | 58245514 | ID=MS.gene049698.t1;Parent=MS.gene049698 |
| chr3.3 | exon | 58249974 | 58250216 | 58249974 | ID=MS.gene049698.t1.exon1;Parent=MS.gene049698.t1 |
| chr3.3 | CDS | 58249974 | 58250216 | 58249974 | ID=cds.MS.gene049698.t1;Parent=MS.gene049698.t1 |
| chr3.3 | exon | 58249429 | 58249583 | 58249429 | ID=MS.gene049698.t1.exon2;Parent=MS.gene049698.t1 |
| chr3.3 | CDS | 58249429 | 58249583 | 58249429 | ID=cds.MS.gene049698.t1;Parent=MS.gene049698.t1 |
| chr3.3 | exon | 58249117 | 58249309 | 58249117 | ID=MS.gene049698.t1.exon3;Parent=MS.gene049698.t1 |
| chr3.3 | CDS | 58249117 | 58249309 | 58249117 | ID=cds.MS.gene049698.t1;Parent=MS.gene049698.t1 |
| chr3.3 | exon | 58248784 | 58248902 | 58248784 | ID=MS.gene049698.t1.exon4;Parent=MS.gene049698.t1 |
| chr3.3 | CDS | 58248784 | 58248902 | 58248784 | ID=cds.MS.gene049698.t1;Parent=MS.gene049698.t1 |
| chr3.3 | exon | 58248489 | 58248705 | 58248489 | ID=MS.gene049698.t1.exon5;Parent=MS.gene049698.t1 |
| chr3.3 | CDS | 58248489 | 58248705 | 58248489 | ID=cds.MS.gene049698.t1;Parent=MS.gene049698.t1 |
| chr3.3 | exon | 58248000 | 58248095 | 58248000 | ID=MS.gene049698.t1.exon6;Parent=MS.gene049698.t1 |
| chr3.3 | CDS | 58248000 | 58248095 | 58248000 | ID=cds.MS.gene049698.t1;Parent=MS.gene049698.t1 |
| chr3.3 | exon | 58247725 | 58247898 | 58247725 | ID=MS.gene049698.t1.exon7;Parent=MS.gene049698.t1 |
| chr3.3 | CDS | 58247725 | 58247898 | 58247725 | ID=cds.MS.gene049698.t1;Parent=MS.gene049698.t1 |
| chr3.3 | exon | 58247471 | 58247587 | 58247471 | ID=MS.gene049698.t1.exon8;Parent=MS.gene049698.t1 |
| chr3.3 | CDS | 58247471 | 58247587 | 58247471 | ID=cds.MS.gene049698.t1;Parent=MS.gene049698.t1 |
| chr3.3 | exon | 58247163 | 58247329 | 58247163 | ID=MS.gene049698.t1.exon9;Parent=MS.gene049698.t1 |
| chr3.3 | CDS | 58247163 | 58247329 | 58247163 | ID=cds.MS.gene049698.t1;Parent=MS.gene049698.t1 |
| chr3.3 | exon | 58246781 | 58247005 | 58246781 | ID=MS.gene049698.t1.exon10;Parent=MS.gene049698.t1 |
| chr3.3 | CDS | 58246781 | 58247005 | 58246781 | ID=cds.MS.gene049698.t1;Parent=MS.gene049698.t1 |
| chr3.3 | exon | 58246120 | 58246686 | 58246120 | ID=MS.gene049698.t1.exon11;Parent=MS.gene049698.t1 |
| chr3.3 | CDS | 58246120 | 58246686 | 58246120 | ID=cds.MS.gene049698.t1;Parent=MS.gene049698.t1 |
| chr3.3 | exon | 58245878 | 58246016 | 58245878 | ID=MS.gene049698.t1.exon12;Parent=MS.gene049698.t1 |
| chr3.3 | CDS | 58245878 | 58246016 | 58245878 | ID=cds.MS.gene049698.t1;Parent=MS.gene049698.t1 |
| chr3.3 | exon | 58245715 | 58245803 | 58245715 | ID=MS.gene049698.t1.exon13;Parent=MS.gene049698.t1 |
| chr3.3 | CDS | 58245715 | 58245803 | 58245715 | ID=cds.MS.gene049698.t1;Parent=MS.gene049698.t1 |
| chr3.3 | exon | 58245514 | 58245541 | 58245514 | ID=MS.gene049698.t1.exon14;Parent=MS.gene049698.t1 |
| chr3.3 | CDS | 58245514 | 58245541 | 58245514 | ID=cds.MS.gene049698.t1;Parent=MS.gene049698.t1 |
| Gene Sequence |
| Protein sequence |
