Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29482.t1 | XP_024639073.1 | 97.6 | 410 | 9 | 1 | 1 | 409 | 1 | 410 | 4.80E-223 | 783.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29482.t1 | B0C9F4 | 54.1 | 338 | 146 | 3 | 43 | 380 | 13 | 341 | 1.9e-98 | 360.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29482.t1 | A0A396HUE3 | 97.6 | 410 | 9 | 1 | 1 | 409 | 1 | 410 | 3.5e-223 | 783.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene29482 | MS.gene92356 | PPI |
| MS.gene29482 | MS.gene024959 | PPI |
| MS.gene29482 | MS.gene40523 | PPI |
| MS.gene29482 | MS.gene046940 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29482.t1 | MTR_5g079860 | 97.549 | 408 | 9 | 1 | 1 | 407 | 1 | 408 | 0.0 | 824 |
| MS.gene29482.t1 | MTR_5g005050 | 39.527 | 296 | 158 | 7 | 116 | 394 | 86 | 377 | 3.90e-55 | 187 |
| MS.gene29482.t1 | MTR_8g064490 | 37.143 | 350 | 201 | 10 | 40 | 379 | 81 | 421 | 1.04e-51 | 179 |
| MS.gene29482.t1 | MTR_5g005050 | 35.254 | 295 | 137 | 7 | 116 | 394 | 86 | 342 | 1.63e-40 | 147 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29482.t1 | AT2G39670 | 74.462 | 372 | 91 | 3 | 31 | 399 | 50 | 420 | 0.0 | 565 |
| MS.gene29482.t1 | AT2G39670 | 73.600 | 375 | 92 | 4 | 31 | 399 | 50 | 423 | 0.0 | 556 |
| MS.gene29482.t1 | AT3G19630 | 41.034 | 290 | 151 | 8 | 114 | 387 | 74 | 359 | 1.63e-58 | 195 |
| MS.gene29482.t1 | AT1G60230 | 35.933 | 359 | 214 | 9 | 29 | 379 | 83 | 433 | 1.58e-56 | 192 |
Find 108 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTAACTTCTTTATTGTATT+TGG | 0.102949 | 5.3:-64539842 | None:intergenic |
| GGTGACTAATGTAGTCTTTA+TGG | 0.145319 | 5.3:+64538749 | MS.gene29482:CDS |
| CAATTGTCTCCCTTAGTTTC+TGG | 0.213313 | 5.3:-64540148 | None:intergenic |
| TTCTTGTAGGATATACAAAT+TGG | 0.226433 | 5.3:+64539785 | MS.gene29482:intron |
| GAGCCTTCTATTGGATTAAA+AGG | 0.231828 | 5.3:-64540461 | None:intergenic |
| GGAATCCCAGCTTCCAAATA+TGG | 0.267536 | 5.3:+64540758 | MS.gene29482:CDS |
| CTGAGTTTCGCCGTCCTTAC+AGG | 0.268932 | 5.3:+64540483 | MS.gene29482:CDS |
| TTGCAGTGCCTAAGGCATTT+AGG | 0.274879 | 5.3:+64537559 | MS.gene29482:intron |
| GTAACTGCAAGGTCCATATT+TGG | 0.284371 | 5.3:-64540771 | None:intergenic |
| AATATGGACCTTGCAGTTAC+AGG | 0.294764 | 5.3:+64540774 | MS.gene29482:CDS |
| GTGCCTCAATTACTGCCTTC+AGG | 0.297624 | 5.3:-64538794 | None:intergenic |
| GAGGAAGGTCAAAGATATTC+AGG | 0.299020 | 5.3:+64537106 | MS.gene29482:CDS |
| GGCACACCATTGCTTGAATA+AGG | 0.312342 | 5.3:+64538812 | MS.gene29482:CDS |
| CGAAACTCAGAGCCTTCTAT+TGG | 0.317774 | 5.3:-64540470 | None:intergenic |
| GCAAGCATTTGTTAATGCTT+TGG | 0.362056 | 5.3:+64540614 | MS.gene29482:CDS |
| TTTGCAGTTGTTATTAAAGT+TGG | 0.362505 | 5.3:+64538147 | MS.gene29482:intron |
| GCTAAACTACTACATGAATA+TGG | 0.366452 | 5.3:+64540413 | MS.gene29482:CDS |
| GTCTCCCTTAGTTTCTGGTT+AGG | 0.377471 | 5.3:-64540143 | None:intergenic |
| GCAACGACAGTGTTGAAAAT+AGG | 0.379748 | 5.3:-64537621 | None:intergenic |
| CCTCAGTCTCAGGTTCTCCT+TGG | 0.396335 | 5.3:+64536875 | MS.gene29482:CDS |
| GTGACTAATGTAGTCTTTAT+GGG | 0.396455 | 5.3:+64538750 | MS.gene29482:CDS |
| TAATTTCCAGAAAACTCCTT+TGG | 0.404689 | 5.3:+64540713 | MS.gene29482:CDS |
| TGCATTTGCGTCCAGTCCTC+TGG | 0.405368 | 5.3:-64540670 | None:intergenic |
| TTGCGTCCAGTCCTCTGGTT+TGG | 0.406021 | 5.3:-64540665 | None:intergenic |
| AAACCTGCTCAACAATTTCA+TGG | 0.407549 | 5.3:-64538459 | None:intergenic |
| TATCATACTGCTTTCCTGTA+AGG | 0.409585 | 5.3:-64540497 | None:intergenic |
| AGGAATGAGCTTGAGGAAGC+TGG | 0.428323 | 5.3:+64537579 | MS.gene29482:CDS |
| GAACCCTTCTCATCTTCAAC+AGG | 0.434924 | 5.3:-64538202 | None:intergenic |
| TGCTTGCATTGCAGTGCCTA+AGG | 0.437043 | 5.3:+64537551 | MS.gene29482:intron |
| ATGCTCCTAACCAGAAACTA+AGG | 0.440088 | 5.3:+64540138 | MS.gene29482:CDS |
| CAAGGTCCATATTTGGAAGC+TGG | 0.447943 | 5.3:-64540764 | None:intergenic |
| GAGCCATGAAATTGTTGAGC+AGG | 0.455181 | 5.3:+64538456 | MS.gene29482:CDS |
| GTGCGAGGGGCATGGAATAG+TGG | 0.456188 | 5.3:-64536781 | None:intergenic |
| AACACTGTCGTTGCAACTGA+TGG | 0.456821 | 5.3:+64537630 | MS.gene29482:CDS |
| ACTTGCCCTTGACTTTGGTC+AGG | 0.457092 | 5.3:+64536922 | MS.gene29482:CDS |
| AATGTAGTCTTTATGGGAAT+GGG | 0.461630 | 5.3:+64538756 | MS.gene29482:CDS |
| TGCAACTGATGGAACTGTTA+AGG | 0.469379 | 5.3:+64537641 | MS.gene29482:CDS |
| TCGCACAATTCCTCAGTCTC+AGG | 0.472816 | 5.3:+64536865 | MS.gene29482:CDS |
| TCTTGTAGGATATACAAATT+GGG | 0.477367 | 5.3:+64539786 | MS.gene29482:intron |
| CACGGACTCTGAGAACAATC+TGG | 0.480872 | 5.3:+64540737 | MS.gene29482:CDS |
| AGAAGAAGTTGCGAAGGAAA+TGG | 0.498648 | 5.3:-64536837 | None:intergenic |
| AAGGTCCATATTTGGAAGCT+GGG | 0.504412 | 5.3:-64540763 | None:intergenic |
| CATTCACCTTATTCAAGCAA+TGG | 0.504951 | 5.3:-64538818 | None:intergenic |
| CAATTACCTCACAGCTAAAG+TGG | 0.507563 | 5.3:-64539882 | None:intergenic |
| CCAGAAAACTCCTTTGGTCA+CGG | 0.507777 | 5.3:+64540719 | MS.gene29482:CDS |
| TAATGTAGTCTTTATGGGAA+TGG | 0.509539 | 5.3:+64538755 | MS.gene29482:CDS |
| CACCGCACGTGCGAGGGGCA+TGG | 0.514603 | 5.3:-64536789 | None:intergenic |
| GTTTCTGGTTAGGAGCATGT+AGG | 0.523254 | 5.3:-64540133 | None:intergenic |
| GCGTTTGAACACCTCCTCAA+TGG | 0.524945 | 5.3:-64538724 | None:intergenic |
| GCGATGAGACACATGCTGTC+AGG | 0.525569 | 5.3:-64538231 | None:intergenic |
| GACAGCATGTGTCTCATCGC+AGG | 0.528606 | 5.3:+64538234 | MS.gene29482:CDS |
| AGATATTCAGGAGTTTACTC+AGG | 0.528880 | 5.3:+64537118 | MS.gene29482:CDS |
| AGCTCATTCCTAAATGCCTT+AGG | 0.533393 | 5.3:-64537567 | None:intergenic |
| CTTGCATAAGTGCATCCAAT+GGG | 0.539229 | 5.3:-64540190 | None:intergenic |
| AAACCCGTCTACTTGTTTCA+CGG | 0.539512 | 5.3:-64540229 | None:intergenic |
| TATTCCTGTTGAAGATGAGA+AGG | 0.546449 | 5.3:+64538198 | MS.gene29482:CDS |
| AAACCTGAAGGCAGTAATTG+AGG | 0.546549 | 5.3:+64538791 | MS.gene29482:CDS |
| TTTATCATCTTATATACAAG+AGG | 0.550624 | 5.3:+64537087 | MS.gene29482:CDS |
| AAGTGCAAAGTCTTACCCAT+TGG | 0.552672 | 5.3:+64540175 | MS.gene29482:CDS |
| TGCACTTATGCAAGATTGCA+AGG | 0.556111 | 5.3:+64540199 | MS.gene29482:CDS |
| AGGAGAAGAAGAAGTTGCGA+AGG | 0.559114 | 5.3:-64536843 | None:intergenic |
| GGCATTTAGGAATGAGCTTG+AGG | 0.565980 | 5.3:+64537572 | MS.gene29482:CDS |
| TCTGGTTTGGCGTACACTAG+TGG | 0.566254 | 5.3:-64540652 | None:intergenic |
| TTCTCAGAGTCCGTGACCAA+AGG | 0.568654 | 5.3:-64540729 | None:intergenic |
| AACAGATTGATTGAAACTGT+TGG | 0.569401 | 5.3:+64538175 | MS.gene29482:CDS |
| CTTCCGTGAAACAAGTAGAC+GGG | 0.570089 | 5.3:+64540226 | MS.gene29482:CDS |
| AAGGACGCACCGCACGTGCG+AGG | 0.571527 | 5.3:-64536796 | None:intergenic |
| ATGAGCTTGAGGAAGCTGGA+TGG | 0.572364 | 5.3:+64537583 | MS.gene29482:CDS |
| GAGGAAGCTGGATGGAAGGT+AGG | 0.573348 | 5.3:+64537591 | MS.gene29482:CDS |
| AAGCTGGATGGAAGGTAGGA+AGG | 0.573576 | 5.3:+64537595 | MS.gene29482:CDS |
| TTCCATGCCCCTCGCACGTG+CGG | 0.573881 | 5.3:+64536787 | MS.gene29482:CDS |
| ACCTAAAAGTGCATATTCAA+AGG | 0.574651 | 5.3:-64540252 | None:intergenic |
| AATGGGTAAGACTTTGCACT+TGG | 0.575944 | 5.3:-64540173 | None:intergenic |
| CCAAGGAGAACCTGAGACTG+AGG | 0.576686 | 5.3:-64536875 | None:intergenic |
| GCGGCACGTGTGTGAGGTGA+AGG | 0.580205 | 5.3:-64536815 | None:intergenic |
| TGTACGCCAAACCAGAGGAC+TGG | 0.586064 | 5.3:+64540659 | MS.gene29482:CDS |
| TTGAGGAGGTGTTCAAACGC+AGG | 0.587360 | 5.3:+64538727 | MS.gene29482:CDS |
| GGACGCACCGCACGTGCGAG+GGG | 0.588242 | 5.3:-64536794 | None:intergenic |
| ATGATGACTATCTCCACCGT+GGG | 0.589221 | 5.3:+64539815 | MS.gene29482:CDS |
| TGAACAGGTCTTGGCCATTG+AGG | 0.590271 | 5.3:+64538710 | MS.gene29482:intron |
| ACTGCCTTCAGGTTTAACAT+TGG | 0.591448 | 5.3:-64538783 | None:intergenic |
| TGCTCCTAACCAGAAACTAA+GGG | 0.592577 | 5.3:+64540139 | MS.gene29482:CDS |
| AGGACGCACCGCACGTGCGA+GGG | 0.593033 | 5.3:-64536795 | None:intergenic |
| CTACTACATGAATATGGCAG+TGG | 0.597183 | 5.3:+64540419 | MS.gene29482:CDS |
| GCTTGAGGAAGCTGGATGGA+AGG | 0.597552 | 5.3:+64537587 | MS.gene29482:CDS |
| TCATCTTATATACAAGAGGA+AGG | 0.599803 | 5.3:+64537091 | MS.gene29482:CDS |
| TGAACCAATGTTAAACCTGA+AGG | 0.600380 | 5.3:+64538779 | MS.gene29482:CDS |
| AATTTACCTGACCAAAGTCA+AGG | 0.603496 | 5.3:-64536928 | None:intergenic |
| ATTCCTGTTGAAGATGAGAA+GGG | 0.606671 | 5.3:+64538199 | MS.gene29482:CDS |
| GTTCGGTTTCGGATAAGCCA+AGG | 0.607702 | 5.3:-64536892 | None:intergenic |
| GATATTCAGGAGTTTACTCA+GGG | 0.617312 | 5.3:+64537119 | MS.gene29482:CDS |
| TGAGGAGGTGTTCAAACGCA+GGG | 0.618525 | 5.3:+64538728 | MS.gene29482:CDS |
| TTCAATCCACTTTAGCTGTG+AGG | 0.629054 | 5.3:+64539876 | MS.gene29482:CDS |
| ATTTACCTGACCAAAGTCAA+GGG | 0.630175 | 5.3:-64536927 | None:intergenic |
| AGCAGCTGGAATCAATGACT+CGG | 0.632061 | 5.3:+64540370 | MS.gene29482:intron |
| TCTTGCATAAGTGCATCCAA+TGG | 0.635143 | 5.3:-64540191 | None:intergenic |
| ATACTGCTTTCCTGTAAGGA+CGG | 0.636058 | 5.3:-64540493 | None:intergenic |
| ACAGGTCTTGGCCATTGAGG+AGG | 0.637192 | 5.3:+64538713 | MS.gene29482:intron |
| ACTTCCGTGAAACAAGTAGA+CGG | 0.653208 | 5.3:+64540225 | MS.gene29482:CDS |
| GCAATCAACCTGTAACTGCA+AGG | 0.653477 | 5.3:-64540782 | None:intergenic |
| GAAATGGCGGCACGTGTGTG+AGG | 0.656275 | 5.3:-64536821 | None:intergenic |
| AGAAGTTGCGAAGGAAATGG+CGG | 0.675289 | 5.3:-64536834 | None:intergenic |
| TGAGACTGAGGAATTGTGCG+AGG | 0.678499 | 5.3:-64536863 | None:intergenic |
| CTGGACGCAAATGCAGCTTG+TGG | 0.692862 | 5.3:+64540678 | MS.gene29482:CDS |
| GATGACTATCTCCACCGTGG+GGG | 0.705173 | 5.3:+64539817 | MS.gene29482:CDS |
| ACTAGTGTACGCCAAACCAG+AGG | 0.706693 | 5.3:+64540654 | MS.gene29482:CDS |
| TGATGACTATCTCCACCGTG+GGG | 0.711405 | 5.3:+64539816 | MS.gene29482:CDS |
| AATGATGACTATCTCCACCG+TGG | 0.716532 | 5.3:+64539814 | MS.gene29482:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAATAAAATGAAATATAAA+AGG | - | chr5.3:64539703-64539722 | None:intergenic | 10.0% |
| !! | AAAATATTTATGCATACATA+TGG | + | chr5.3:64539429-64539448 | MS.gene29482:intron | 15.0% |
| !! | ATTGAACAAATTAATAATGA+AGG | - | chr5.3:64536977-64536996 | None:intergenic | 15.0% |
| !! | CAATACATTATTTATTTCAA+AGG | + | chr5.3:64537767-64537786 | MS.gene29482:intron | 15.0% |
| !! | TCATTGTATTAAGTTATTAT+TGG | + | chr5.3:64537274-64537293 | MS.gene29482:intron | 15.0% |
| !!! | AATTAGTTATGTTTTATGTT+TGG | + | chr5.3:64539284-64539303 | MS.gene29482:intron | 15.0% |
| !!! | ATTTTTCATTTTTCTAAACA+CGG | + | chr5.3:64540528-64540547 | MS.gene29482:intron | 15.0% |
| !!! | TACATAATATTATCTTTTCA+CGG | + | chr5.3:64539175-64539194 | MS.gene29482:intron | 15.0% |
| !! | AAAATGTTAACAGAAAAGAA+AGG | + | chr5.3:64538585-64538604 | MS.gene29482:intron | 20.0% |
| !! | AACAAATTAATAATGAAGGA+AGG | - | chr5.3:64536973-64536992 | None:intergenic | 20.0% |
| !! | AACATTATCATTTAAACTCT+GGG | + | chr5.3:64538963-64538982 | MS.gene29482:intron | 20.0% |
| !! | AATTAAATCTAAATTGCCTT+GGG | - | chr5.3:64538556-64538575 | None:intergenic | 20.0% |
| !! | ACAAATTAATAATGAAGGAA+GGG | - | chr5.3:64536972-64536991 | None:intergenic | 20.0% |
| !! | ATAAATAAATAAATTGCCCA+AGG | + | chr5.3:64538537-64538556 | MS.gene29482:intron | 20.0% |
| !! | ATATGTATTATTGAGTAAGA+AGG | + | chr5.3:64537188-64537207 | MS.gene29482:intron | 20.0% |
| !! | TAAACACGGTTTATAATTTA+TGG | + | chr5.3:64540542-64540561 | MS.gene29482:intron | 20.0% |
| !! | TAACATTATCATTTAAACTC+TGG | + | chr5.3:64538962-64538981 | MS.gene29482:intron | 20.0% |
| !! | TAATTAAATCTAAATTGCCT+TGG | - | chr5.3:64538557-64538576 | None:intergenic | 20.0% |
| !! | TATCAAATTATTACTGTTGT+CGG | + | chr5.3:64537451-64537470 | MS.gene29482:intron | 20.0% |
| !! | TATTTATTTACAGATCACAT+GGG | - | chr5.3:64538524-64538543 | None:intergenic | 20.0% |
| !! | TTATTTATTTACAGATCACA+TGG | - | chr5.3:64538525-64538544 | None:intergenic | 20.0% |
| !! | TTTATCATCTTATATACAAG+AGG | + | chr5.3:64537087-64537106 | MS.gene29482:CDS | 20.0% |
| !!! | ATTCTTGTTTTTCTATTTGT+TGG | + | chr5.3:64538116-64538135 | MS.gene29482:intron | 20.0% |
| !!! | TCCTGCTAATTATTTTTTAT+GGG | + | chr5.3:64537731-64537750 | MS.gene29482:intron | 20.0% |
| !!! | TTCCTGCTAATTATTTTTTA+TGG | + | chr5.3:64537730-64537749 | MS.gene29482:intron | 20.0% |
| !!! | TTTAATTTCTATAGAACTTC+TGG | - | chr5.3:64539241-64539260 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTTGTGTTTTACT+TGG | + | chr5.3:64538009-64538028 | MS.gene29482:intron | 20.0% |
| ! | AAAAATGAGAACAATGTCAA+TGG | - | chr5.3:64537970-64537989 | None:intergenic | 25.0% |
| ! | AGTTCTATAGAAATTAAAGC+AGG | + | chr5.3:64539243-64539262 | MS.gene29482:intron | 25.0% |
| ! | ATGGACATAACAAAAAGAAA+TGG | - | chr5.3:64538352-64538371 | None:intergenic | 25.0% |
| ! | ATTTGCAAAACCAATTTGTA+AGG | - | chr5.3:64539082-64539101 | None:intergenic | 25.0% |
| ! | CAAATTACATTTGTGTTTAG+AGG | - | chr5.3:64537944-64537963 | None:intergenic | 25.0% |
| ! | CGTCAAAAGAAATCATTTAT+CGG | + | chr5.3:64539457-64539476 | MS.gene29482:intron | 25.0% |
| ! | CTAAATATCCAAATAACAGA+TGG | - | chr5.3:64538371-64538390 | None:intergenic | 25.0% |
| ! | GATATAATGTCACATATCAT+AGG | - | chr5.3:64538851-64538870 | None:intergenic | 25.0% |
| ! | GCTAACTTCTTTATTGTATT+TGG | - | chr5.3:64539845-64539864 | None:intergenic | 25.0% |
| ! | TCAACAAACAAGACAAAATA+AGG | - | chr5.3:64537165-64537184 | None:intergenic | 25.0% |
| ! | TCTTGTAGGATATACAAATT+GGG | + | chr5.3:64539786-64539805 | MS.gene29482:intron | 25.0% |
| ! | TTCTTGTAGGATATACAAAT+TGG | + | chr5.3:64539785-64539804 | MS.gene29482:intron | 25.0% |
| !! | ATAATATTATCTTTTCACGG+AGG | + | chr5.3:64539178-64539197 | MS.gene29482:intron | 25.0% |
| !! | ATACCTTTTAATCCAATAGA+AGG | + | chr5.3:64540458-64540477 | MS.gene29482:CDS | 25.0% |
| !! | ATTAAGTTATTATTGGTGTC+AGG | + | chr5.3:64537281-64537300 | MS.gene29482:intron | 25.0% |
| !! | ATTTTTCTTAGCAAGGTTTT+AGG | + | chr5.3:64537054-64537073 | MS.gene29482:intron | 25.0% |
| !! | CATCTGTTATTTGGATATTT+AGG | + | chr5.3:64538369-64538388 | MS.gene29482:intron | 25.0% |
| !! | CGATAAATGATTTCTTTTGA+CGG | - | chr5.3:64539459-64539478 | None:intergenic | 25.0% |
| !! | TGATTGAATTTTTCTTAGCA+AGG | + | chr5.3:64537047-64537066 | MS.gene29482:intron | 25.0% |
| !! | TGTTATTTGGATATTTAGGT+AGG | + | chr5.3:64538373-64538392 | MS.gene29482:intron | 25.0% |
| !! | TTTGCAGTTGTTATTAAAGT+TGG | + | chr5.3:64538147-64538166 | MS.gene29482:intron | 25.0% |
| !! | TTTTTCTTAGCAAGGTTTTA+GGG | + | chr5.3:64537055-64537074 | MS.gene29482:intron | 25.0% |
| !!! | AAAGTATTAACTTTTCGATG+TGG | + | chr5.3:64537514-64537533 | MS.gene29482:intron | 25.0% |
| !!! | ATATTTTTATGCATGTGAGA+TGG | - | chr5.3:64539416-64539435 | None:intergenic | 25.0% |
| !!! | CCTGCTAATTATTTTTTATG+GGG | + | chr5.3:64537732-64537751 | MS.gene29482:intron | 25.0% |
| !!! | GATATTAACTTGCTTGTTAA+AGG | + | chr5.3:64538053-64538072 | MS.gene29482:intron | 25.0% |
| !!! | TAATTTGTTCTCTTAAGTTC+TGG | - | chr5.3:64539269-64539288 | None:intergenic | 25.0% |
| AAAACAACTTGAATCATTGC+CGG | - | chr5.3:64537993-64538012 | None:intergenic | 30.0% | |
| AAAACCAATTTGTAAGGTGA+GGG | - | chr5.3:64539076-64539095 | None:intergenic | 30.0% | |
| AAACTACTCTACTGTATGTA+TGG | - | chr5.3:64538489-64538508 | None:intergenic | 30.0% | |
| AACAGATTGATTGAAACTGT+TGG | + | chr5.3:64538175-64538194 | MS.gene29482:CDS | 30.0% | |
| AATGTAGTCTTTATGGGAAT+GGG | + | chr5.3:64538756-64538775 | MS.gene29482:CDS | 30.0% | |
| ACTCTTTATAAACTCACTTC+AGG | - | chr5.3:64539048-64539067 | None:intergenic | 30.0% | |
| ACTTGGTATTCTTAAGAAGA+AGG | + | chr5.3:64538026-64538045 | MS.gene29482:intron | 30.0% | |
| AGACATCTCAAGAAATAAAG+TGG | - | chr5.3:64537920-64537939 | None:intergenic | 30.0% | |
| CCCCATAAAAAATAATTAGC+AGG | - | chr5.3:64537735-64537754 | None:intergenic | 30.0% | |
| CTTGGTATTCTTAAGAAGAA+GGG | + | chr5.3:64538027-64538046 | MS.gene29482:intron | 30.0% | |
| GCTAAACTACTACATGAATA+TGG | + | chr5.3:64540413-64540432 | MS.gene29482:CDS | 30.0% | |
| GTGACTAATGTAGTCTTTAT+GGG | + | chr5.3:64538750-64538769 | MS.gene29482:CDS | 30.0% | |
| TAATGTAGTCTTTATGGGAA+TGG | + | chr5.3:64538755-64538774 | MS.gene29482:CDS | 30.0% | |
| TAATTTCCAGAAAACTCCTT+TGG | + | chr5.3:64540713-64540732 | MS.gene29482:CDS | 30.0% | |
| TAGAGAACTGTTACAATTAC+AGG | - | chr5.3:64538889-64538908 | None:intergenic | 30.0% | |
| TCAATCCAAACTTTGTCATT+TGG | + | chr5.3:64540586-64540605 | MS.gene29482:intron | 30.0% | |
| TCAGTGCATAAAAAAAACCA+AGG | - | chr5.3:64538097-64538116 | None:intergenic | 30.0% | |
| TCATCTTATATACAAGAGGA+AGG | + | chr5.3:64537091-64537110 | MS.gene29482:CDS | 30.0% | |
| TCATTAACTTTACTGTACGA+GGG | - | chr5.3:64540308-64540327 | None:intergenic | 30.0% | |
| TGAAGTGAGTTTATAAAGAG+TGG | + | chr5.3:64539047-64539066 | MS.gene29482:intron | 30.0% | |
| TGTTATGTCCATCTGTTATT+TGG | + | chr5.3:64538360-64538379 | MS.gene29482:intron | 30.0% | |
| TTCATTAACTTTACTGTACG+AGG | - | chr5.3:64540309-64540328 | None:intergenic | 30.0% | |
| ! | AAACCAACAAGATCATTTTC+AGG | + | chr5.3:64538621-64538640 | MS.gene29482:intron | 30.0% |
| ! | ACATTGCATTTTATGTGAAC+AGG | + | chr5.3:64538695-64538714 | MS.gene29482:intron | 30.0% |
| ! | ACCTAAAAGTGCATATTCAA+AGG | - | chr5.3:64540255-64540274 | None:intergenic | 30.0% |
| ! | ACTCATTGGTAGTTACTTAT+TGG | + | chr5.3:64538986-64539005 | MS.gene29482:intron | 30.0% |
| ! | ATCTAGTTTATGCTTTCCAA+TGG | - | chr5.3:64539380-64539399 | None:intergenic | 30.0% |
| ! | CCACCAAATGATATATTTTG+CGG | - | chr5.3:64540025-64540044 | None:intergenic | 30.0% |
| ! | CTCATTGGTAGTTACTTATT+GGG | + | chr5.3:64538987-64539006 | MS.gene29482:intron | 30.0% |
| ! | GATCAGAATAAAGTTTTGCT+TGG | + | chr5.3:64539667-64539686 | MS.gene29482:intron | 30.0% |
| ! | TCCTTTGAATATGCACTTTT+AGG | + | chr5.3:64540251-64540270 | MS.gene29482:CDS | 30.0% |
| !! | TAACTTGCTTGTTAAAGGAT+GGG | + | chr5.3:64538058-64538077 | MS.gene29482:intron | 30.0% |
| !! | TGACATTGTTCTCATTTTTC+CGG | + | chr5.3:64537971-64537990 | MS.gene29482:intron | 30.0% |
| !! | TTAACTTGCTTGTTAAAGGA+TGG | + | chr5.3:64538057-64538076 | MS.gene29482:intron | 30.0% |
| !! | TTTTCTTAGCAAGGTTTTAG+GGG | + | chr5.3:64537056-64537075 | MS.gene29482:intron | 30.0% |
| !!! | GAGGAACATGAATTTTTTCA+TGG | + | chr5.3:64539200-64539219 | MS.gene29482:intron | 30.0% |
| !!! | GTGATACATTTTAGTTCCAT+TGG | + | chr5.3:64539361-64539380 | MS.gene29482:intron | 30.0% |
| AAACCAATTTGTAAGGTGAG+GGG | - | chr5.3:64539075-64539094 | None:intergenic | 35.0% | |
| AAACCTGCTCAACAATTTCA+TGG | - | chr5.3:64538462-64538481 | None:intergenic | 35.0% | |
| AATTTACCTGACCAAAGTCA+AGG | - | chr5.3:64536931-64536950 | None:intergenic | 35.0% | |
| ACAACAACAACAACAACAAC+AGG | - | chr5.3:64537694-64537713 | None:intergenic | 35.0% | |
| ACCAGAGTATGAACAATGAA+AGG | - | chr5.3:64539979-64539998 | None:intergenic | 35.0% | |
| ACCTACCAAATGACAAAGTT+TGG | - | chr5.3:64540594-64540613 | None:intergenic | 35.0% | |
| ACTTACAAGTAGAACAGAAC+AGG | + | chr5.3:64539318-64539337 | MS.gene29482:intron | 35.0% | |
| AGATATTCAGGAGTTTACTC+AGG | + | chr5.3:64537118-64537137 | MS.gene29482:CDS | 35.0% | |
| ATTCCATCTTAGCAAGTGTT+AGG | + | chr5.3:64539126-64539145 | MS.gene29482:intron | 35.0% | |
| ATTCCTGTTGAAGATGAGAA+GGG | + | chr5.3:64538199-64538218 | MS.gene29482:CDS | 35.0% | |
| ATTGGGAAAAAACCCAAATC+CGG | + | chr5.3:64539004-64539023 | MS.gene29482:intron | 35.0% | |
| ATTTACCTGACCAAAGTCAA+GGG | - | chr5.3:64536930-64536949 | None:intergenic | 35.0% | |
| CAAAACCAATTTGTAAGGTG+AGG | - | chr5.3:64539077-64539096 | None:intergenic | 35.0% | |
| CAAACATAATGACAGGAAAG+TGG | - | chr5.3:64540350-64540369 | None:intergenic | 35.0% | |
| CATTCACCTTATTCAAGCAA+TGG | - | chr5.3:64538821-64538840 | None:intergenic | 35.0% | |
| CCGCAAAATATATCATTTGG+TGG | + | chr5.3:64540022-64540041 | MS.gene29482:intron | 35.0% | |
| GAACCTGAAAATGATCTTGT+TGG | - | chr5.3:64538627-64538646 | None:intergenic | 35.0% | |
| GAGCCTTCTATTGGATTAAA+AGG | - | chr5.3:64540464-64540483 | None:intergenic | 35.0% | |
| GATATTCAGGAGTTTACTCA+GGG | + | chr5.3:64537119-64537138 | MS.gene29482:CDS | 35.0% | |
| GGTGACTAATGTAGTCTTTA+TGG | + | chr5.3:64538749-64538768 | MS.gene29482:CDS | 35.0% | |
| GTATGTAAGTGTGCTAATGT+TGG | + | chr5.3:64539749-64539768 | MS.gene29482:intron | 35.0% | |
| GTATTCTTAAGAAGAAGGGT+AGG | + | chr5.3:64538031-64538050 | MS.gene29482:intron | 35.0% | |
| GTGATTGAATATAACCACGT+CGG | - | chr5.3:64537423-64537442 | None:intergenic | 35.0% | |
| TATCATACTGCTTTCCTGTA+AGG | - | chr5.3:64540500-64540519 | None:intergenic | 35.0% | |
| TATTCCTGTTGAAGATGAGA+AGG | + | chr5.3:64538198-64538217 | MS.gene29482:CDS | 35.0% | |
| TGAACCAATGTTAAACCTGA+AGG | + | chr5.3:64538779-64538798 | MS.gene29482:CDS | 35.0% | |
| TGGCCGCAAAATATATCATT+TGG | + | chr5.3:64540019-64540038 | MS.gene29482:intron | 35.0% | |
| TTACAGGCAAGCATTTGATA+AGG | - | chr5.3:64538873-64538892 | None:intergenic | 35.0% | |
| TTCTATTCTATGCCGGATTT+GGG | - | chr5.3:64539019-64539038 | None:intergenic | 35.0% | |
| TTTCTATTCTATGCCGGATT+TGG | - | chr5.3:64539020-64539039 | None:intergenic | 35.0% | |
| ! | ATATTATCTTTTCACGGAGG+AGG | + | chr5.3:64539181-64539200 | MS.gene29482:intron | 35.0% |
| ! | CATTTTATGTGAACAGGTCT+TGG | + | chr5.3:64538701-64538720 | MS.gene29482:intron | 35.0% |
| ! | GCAAGCATTTGTTAATGCTT+TGG | + | chr5.3:64540614-64540633 | MS.gene29482:CDS | 35.0% |
| ! | TCCAAACTTTGTCATTTGGT+AGG | + | chr5.3:64540590-64540609 | MS.gene29482:intron | 35.0% |
| !! | ATTTAAACTCTGGGACTCAT+TGG | + | chr5.3:64538972-64538991 | MS.gene29482:intron | 35.0% |
| !! | CACAAAAAGAGCATTTCAGA+GGG | - | chr5.3:64538402-64538421 | None:intergenic | 35.0% |
| !! | GCTCTATTTCTATTCTATGC+CGG | - | chr5.3:64539026-64539045 | None:intergenic | 35.0% |
| !! | TGTTTCAGTGTAGCATTGAT+AGG | + | chr5.3:64537316-64537335 | MS.gene29482:intron | 35.0% |
| !!! | AAGTTTTTGGAGTTCGGTTT+CGG | - | chr5.3:64536906-64536925 | None:intergenic | 35.0% |
| !!! | TTTCTTAGCAAGGTTTTAGG+GGG | + | chr5.3:64537057-64537076 | MS.gene29482:intron | 35.0% |
| AAACCCGTCTACTTGTTTCA+CGG | - | chr5.3:64540232-64540251 | None:intergenic | 40.0% | |
| AAACCTGAAGGCAGTAATTG+AGG | + | chr5.3:64538791-64538810 | MS.gene29482:CDS | 40.0% | |
| AAGTGCAAAGTCTTACCCAT+TGG | + | chr5.3:64540175-64540194 | MS.gene29482:CDS | 40.0% | |
| AATATGGACCTTGCAGTTAC+AGG | + | chr5.3:64540774-64540793 | MS.gene29482:CDS | 40.0% | |
| AATGGGTAAGACTTTGCACT+TGG | - | chr5.3:64540176-64540195 | None:intergenic | 40.0% | |
| ACTTCCGTGAAACAAGTAGA+CGG | + | chr5.3:64540225-64540244 | MS.gene29482:CDS | 40.0% | |
| AGAAGAAGTTGCGAAGGAAA+TGG | - | chr5.3:64536840-64536859 | None:intergenic | 40.0% | |
| AGCCATCTGTGCTCTTAAAT+AGG | + | chr5.3:64538937-64538956 | MS.gene29482:intron | 40.0% | |
| AGCTCATTCCTAAATGCCTT+AGG | - | chr5.3:64537570-64537589 | None:intergenic | 40.0% | |
| AGCTGCTCAAACATAATGAC+AGG | - | chr5.3:64540357-64540376 | None:intergenic | 40.0% | |
| AGTGTGCTAATGTTGGATTC+TGG | + | chr5.3:64539756-64539775 | MS.gene29482:intron | 40.0% | |
| ATACTGCTTTCCTGTAAGGA+CGG | - | chr5.3:64540496-64540515 | None:intergenic | 40.0% | |
| ATGCTCCTAACCAGAAACTA+AGG | + | chr5.3:64540138-64540157 | MS.gene29482:CDS | 40.0% | |
| ATTGTTCATACTCTGGTGTC+TGG | + | chr5.3:64539982-64540001 | MS.gene29482:intron | 40.0% | |
| CAAAAACTTGCCCTTGACTT+TGG | + | chr5.3:64536917-64536936 | MS.gene29482:CDS | 40.0% | |
| CAATTACCTCACAGCTAAAG+TGG | - | chr5.3:64539885-64539904 | None:intergenic | 40.0% | |
| CAATTGTCTCCCTTAGTTTC+TGG | - | chr5.3:64540151-64540170 | None:intergenic | 40.0% | |
| CAGAACAGGATACACTTACA+AGG | + | chr5.3:64539332-64539351 | MS.gene29482:intron | 40.0% | |
| CTACTACATGAATATGGCAG+TGG | + | chr5.3:64540419-64540438 | MS.gene29482:CDS | 40.0% | |
| CTTGCATAAGTGCATCCAAT+GGG | - | chr5.3:64540193-64540212 | None:intergenic | 40.0% | |
| GAGGAAGGTCAAAGATATTC+AGG | + | chr5.3:64537106-64537125 | MS.gene29482:CDS | 40.0% | |
| GATCTTGTCGGTCAAGAATT+AGG | + | chr5.3:64539916-64539935 | MS.gene29482:intron | 40.0% | |
| GCCATCTGTGCTCTTAAATA+GGG | + | chr5.3:64538938-64538957 | MS.gene29482:intron | 40.0% | |
| GCCTTTCATTGTTCATACTC+TGG | + | chr5.3:64539975-64539994 | MS.gene29482:intron | 40.0% | |
| GTAACTGCAAGGTCCATATT+TGG | - | chr5.3:64540774-64540793 | None:intergenic | 40.0% | |
| GTCCTTGATTCTGATCTTGT+CGG | + | chr5.3:64539904-64539923 | MS.gene29482:intron | 40.0% | |
| TCTTGCATAAGTGCATCCAA+TGG | - | chr5.3:64540194-64540213 | None:intergenic | 40.0% | |
| TGCAACTGATGGAACTGTTA+AGG | + | chr5.3:64537641-64537660 | MS.gene29482:CDS | 40.0% | |
| TGCACTTATGCAAGATTGCA+AGG | + | chr5.3:64540199-64540218 | MS.gene29482:CDS | 40.0% | |
| TGCTAATGTTGGATTCTGGT+TGG | + | chr5.3:64539760-64539779 | MS.gene29482:intron | 40.0% | |
| TGCTCCTAACCAGAAACTAA+GGG | + | chr5.3:64540139-64540158 | MS.gene29482:CDS | 40.0% | |
| TGGGATTGTTGATGTTTCCT+TGG | + | chr5.3:64538077-64538096 | MS.gene29482:intron | 40.0% | |
| TGTCATTATGTTTGAGCAGC+TGG | + | chr5.3:64540356-64540375 | MS.gene29482:intron | 40.0% | |
| TTAACTTTACTGTACGAGGG+AGG | - | chr5.3:64540305-64540324 | None:intergenic | 40.0% | |
| TTCAATCCACTTTAGCTGTG+AGG | + | chr5.3:64539876-64539895 | MS.gene29482:CDS | 40.0% | |
| TTGCACCAAATAGCGTATCA+CGG | - | chr5.3:64539550-64539569 | None:intergenic | 40.0% | |
| ! | AAATGCTCTTTTTGTGCCAC+TGG | + | chr5.3:64538406-64538425 | MS.gene29482:CDS | 40.0% |
| ! | ACCCTATTTAAGAGCACAGA+TGG | - | chr5.3:64538942-64538961 | None:intergenic | 40.0% |
| ! | ACTGCCTTCAGGTTTAACAT+TGG | - | chr5.3:64538786-64538805 | None:intergenic | 40.0% |
| ! | CAAAGTCAAGGGCAAGTTTT+TGG | - | chr5.3:64536919-64536938 | None:intergenic | 40.0% |
| ! | GAACCTAACACTTGCTAAGA+TGG | - | chr5.3:64539132-64539151 | None:intergenic | 40.0% |
| ! | GCAACGACAGTGTTGAAAAT+AGG | - | chr5.3:64537624-64537643 | None:intergenic | 40.0% |
| ! | GCATCAGTGTTGTTAAGTAG+CGG | + | chr5.3:64539479-64539498 | MS.gene29482:intron | 40.0% |
| ! | GCTAATGTTGGATTCTGGTT+GGG | + | chr5.3:64539761-64539780 | MS.gene29482:intron | 40.0% |
| ! | TATTGTATTTGGAACCCCCA+CGG | - | chr5.3:64539834-64539853 | None:intergenic | 40.0% |
| ! | TTTTTGTTCCACCACAAAGC+TGG | + | chr5.3:64538669-64538688 | MS.gene29482:intron | 40.0% |
| !! | CATTTGGTGGCTTCTTTTAG+TGG | + | chr5.3:64540035-64540054 | MS.gene29482:intron | 40.0% |
| !! | CTTTTTGTGCCACTGGAAAA+GGG | + | chr5.3:64538413-64538432 | MS.gene29482:CDS | 40.0% |
| !! | GCACAAAAAGAGCATTTCAG+AGG | - | chr5.3:64538403-64538422 | None:intergenic | 40.0% |
| !! | TCTTTTTGTGCCACTGGAAA+AGG | + | chr5.3:64538412-64538431 | MS.gene29482:CDS | 40.0% |
| !! | TTTTTGTGCCACTGGAAAAG+GGG | + | chr5.3:64538414-64538433 | MS.gene29482:CDS | 40.0% |
| !!! | AAGGGCAAGTTTTTGGAGTT+CGG | - | chr5.3:64536912-64536931 | None:intergenic | 40.0% |
| !!! | TTTTCGATGTGGTGTTGTTG+TGG | + | chr5.3:64537525-64537544 | MS.gene29482:intron | 40.0% |
| AACACTGTCGTTGCAACTGA+TGG | + | chr5.3:64537630-64537649 | MS.gene29482:CDS | 45.0% | |
| AATGATGACTATCTCCACCG+TGG | + | chr5.3:64539814-64539833 | MS.gene29482:CDS | 45.0% | |
| AGAAGTTGCGAAGGAAATGG+CGG | - | chr5.3:64536837-64536856 | None:intergenic | 45.0% | |
| AGCAGCTGGAATCAATGACT+CGG | + | chr5.3:64540370-64540389 | MS.gene29482:intron | 45.0% | |
| AGGAGAAGAAGAAGTTGCGA+AGG | - | chr5.3:64536846-64536865 | None:intergenic | 45.0% | |
| AGGCTGATGCAAGACACAAA+AGG | - | chr5.3:64540116-64540135 | None:intergenic | 45.0% | |
| AGGTTCTCTTGCTACTGGAT+TGG | + | chr5.3:64539146-64539165 | MS.gene29482:intron | 45.0% | |
| ATGATGACTATCTCCACCGT+GGG | + | chr5.3:64539815-64539834 | MS.gene29482:CDS | 45.0% | |
| CAAGGTCCATATTTGGAAGC+TGG | - | chr5.3:64540767-64540786 | None:intergenic | 45.0% | |
| CATTGATAGGACATTGACGC+AGG | + | chr5.3:64537329-64537348 | MS.gene29482:intron | 45.0% | |
| CCAGAAAACTCCTTTGGTCA+CGG | + | chr5.3:64540719-64540738 | MS.gene29482:CDS | 45.0% | |
| CGAAACTCAGAGCCTTCTAT+TGG | - | chr5.3:64540473-64540492 | None:intergenic | 45.0% | |
| CTTCCGTGAAACAAGTAGAC+GGG | + | chr5.3:64540226-64540245 | MS.gene29482:CDS | 45.0% | |
| GAACCCTTCTCATCTTCAAC+AGG | - | chr5.3:64538205-64538224 | None:intergenic | 45.0% | |
| GACCGACAAGATCAGAATCA+AGG | - | chr5.3:64539909-64539928 | None:intergenic | 45.0% | |
| GAGCCATGAAATTGTTGAGC+AGG | + | chr5.3:64538456-64538475 | MS.gene29482:CDS | 45.0% | |
| GATGCAAGACACAAAAGGGA+GGG | - | chr5.3:64540111-64540130 | None:intergenic | 45.0% | |
| GGCACACCATTGCTTGAATA+AGG | + | chr5.3:64538812-64538831 | MS.gene29482:CDS | 45.0% | |
| GGCATTTAGGAATGAGCTTG+AGG | + | chr5.3:64537572-64537591 | MS.gene29482:CDS | 45.0% | |
| GGCTGATGCAAGACACAAAA+GGG | - | chr5.3:64540115-64540134 | None:intergenic | 45.0% | |
| GTGTTAGGTTCTCTTGCTAC+TGG | + | chr5.3:64539141-64539160 | MS.gene29482:intron | 45.0% | |
| TCGTGTGAATGACACTGACA+CGG | - | chr5.3:64537394-64537413 | None:intergenic | 45.0% | |
| TGATGCAAGACACAAAAGGG+AGG | - | chr5.3:64540112-64540131 | None:intergenic | 45.0% | |
| TGCAATGTTGTCCAGCTTTG+TGG | - | chr5.3:64538683-64538702 | None:intergenic | 45.0% | |
| TTGCTCCGTGATACGCTATT+TGG | + | chr5.3:64539542-64539561 | MS.gene29482:intron | 45.0% | |
| ! | AATGTTGTCCAGCTTTGTGG+TGG | - | chr5.3:64538680-64538699 | None:intergenic | 45.0% |
| ! | ATTCTGGTTGGGCTTCTTGT+AGG | + | chr5.3:64539772-64539791 | MS.gene29482:intron | 45.0% |
| ! | TTGCAGTGCCTAAGGCATTT+AGG | + | chr5.3:64537559-64537578 | MS.gene29482:intron | 45.0% |
| !! | GGGGCTTTTCAAGGAATCTT+CGG | + | chr5.3:64538434-64538453 | MS.gene29482:CDS | 45.0% |
| !! | GTCTCCCTTAGTTTCTGGTT+AGG | - | chr5.3:64540146-64540165 | None:intergenic | 45.0% |
| !! | GTCTGGTCTGGTTTGATTTG+TGG | + | chr5.3:64539999-64540018 | MS.gene29482:intron | 45.0% |
| !! | GTTTCTGGTTAGGAGCATGT+AGG | - | chr5.3:64540136-64540155 | None:intergenic | 45.0% |
| !! | TTTTGTGCCACTGGAAAAGG+GGG | + | chr5.3:64538415-64538434 | MS.gene29482:CDS | 45.0% |
| AAGCTGGATGGAAGGTAGGA+AGG | + | chr5.3:64537595-64537614 | MS.gene29482:CDS | 50.0% | |
| ACTAGTGTACGCCAAACCAG+AGG | + | chr5.3:64540654-64540673 | MS.gene29482:CDS | 50.0% | |
| ACTTGCCCTTGACTTTGGTC+AGG | + | chr5.3:64536922-64536941 | MS.gene29482:CDS | 50.0% | |
| AGCGTATCACGGAGCAATAG+CGG | - | chr5.3:64539539-64539558 | None:intergenic | 50.0% | |
| AGGAATGAGCTTGAGGAAGC+TGG | + | chr5.3:64537579-64537598 | MS.gene29482:CDS | 50.0% | |
| ATGAGCTTGAGGAAGCTGGA+TGG | + | chr5.3:64537583-64537602 | MS.gene29482:CDS | 50.0% | |
| GCACCCCTCACCTTACAAAT+TGG | + | chr5.3:64539069-64539088 | MS.gene29482:intron | 50.0% | |
| GCGTTTGAACACCTCCTCAA+TGG | - | chr5.3:64538727-64538746 | None:intergenic | 50.0% | |
| GTGCCTCAATTACTGCCTTC+AGG | - | chr5.3:64538797-64538816 | None:intergenic | 50.0% | |
| GTTCGGTTTCGGATAAGCCA+AGG | - | chr5.3:64536895-64536914 | None:intergenic | 50.0% | |
| TCATACTCTGGTGTCTGGTC+TGG | + | chr5.3:64539987-64540006 | MS.gene29482:intron | 50.0% | |
| TCGCACAATTCCTCAGTCTC+AGG | + | chr5.3:64536865-64536884 | MS.gene29482:CDS | 50.0% | |
| TGAACAGGTCTTGGCCATTG+AGG | + | chr5.3:64538710-64538729 | MS.gene29482:intron | 50.0% | |
| TGAGACTGAGGAATTGTGCG+AGG | - | chr5.3:64536866-64536885 | None:intergenic | 50.0% | |
| TGATAGGACATTGACGCAGG+TGG | + | chr5.3:64537332-64537351 | MS.gene29482:intron | 50.0% | |
| TGATGACTATCTCCACCGTG+GGG | + | chr5.3:64539816-64539835 | MS.gene29482:CDS | 50.0% | |
| TGCTTGCATTGCAGTGCCTA+AGG | + | chr5.3:64537551-64537570 | MS.gene29482:intron | 50.0% | |
| TTCTCAGAGTCCGTGACCAA+AGG | - | chr5.3:64540732-64540751 | None:intergenic | 50.0% | |
| ! | CACGGACTCTGAGAACAATC+TGG | + | chr5.3:64540737-64540756 | MS.gene29482:CDS | 50.0% |
| ! | CCGTGACCAAAGGAGTTTTC+TGG | - | chr5.3:64540722-64540741 | None:intergenic | 50.0% |
| ! | CTGGAAAAGGGGGCTTTTCA+AGG | + | chr5.3:64538425-64538444 | MS.gene29482:CDS | 50.0% |
| ! | TGAAAAGCCCCCTTTTCCAG+TGG | - | chr5.3:64538425-64538444 | None:intergenic | 50.0% |
| !! | CGTGTCGGTTGTTCGAACAT+CGG | - | chr5.3:64537219-64537238 | None:intergenic | 50.0% |
| !! | TCTGGTTTGGCGTACACTAG+TGG | - | chr5.3:64540655-64540674 | None:intergenic | 50.0% |
| !! | TGAGGAGGTGTTCAAACGCA+GGG | + | chr5.3:64538728-64538747 | MS.gene29482:CDS | 50.0% |
| !! | TTGAGGAGGTGTTCAAACGC+AGG | + | chr5.3:64538727-64538746 | MS.gene29482:CDS | 50.0% |
| AACCGACACGACACTGACAC+AGG | + | chr5.3:64537229-64537248 | MS.gene29482:intron | 55.0% | |
| ACAGGTCTTGGCCATTGAGG+AGG | + | chr5.3:64538713-64538732 | MS.gene29482:intron | 55.0% | |
| AGAGCACAGATGGCTGTTGC+AGG | - | chr5.3:64538932-64538951 | None:intergenic | 55.0% | |
| CACCTGTGTCAGTGTCGTGT+CGG | - | chr5.3:64537234-64537253 | None:intergenic | 55.0% | |
| CCAAGGAGAACCTGAGACTG+AGG | - | chr5.3:64536878-64536897 | None:intergenic | 55.0% | |
| CCTCAGTCTCAGGTTCTCCT+TGG | + | chr5.3:64536875-64536894 | MS.gene29482:CDS | 55.0% | |
| CTGAGTTTCGCCGTCCTTAC+AGG | + | chr5.3:64540483-64540502 | MS.gene29482:CDS | 55.0% | |
| CTGGACGCAAATGCAGCTTG+TGG | + | chr5.3:64540678-64540697 | MS.gene29482:CDS | 55.0% | |
| GACAGCATGTGTCTCATCGC+AGG | + | chr5.3:64538234-64538253 | MS.gene29482:CDS | 55.0% | |
| GAGGAAGCTGGATGGAAGGT+AGG | + | chr5.3:64537591-64537610 | MS.gene29482:CDS | 55.0% | |
| GATGACTATCTCCACCGTGG+GGG | + | chr5.3:64539817-64539836 | MS.gene29482:CDS | 55.0% | |
| GCGATGAGACACATGCTGTC+AGG | - | chr5.3:64538234-64538253 | None:intergenic | 55.0% | |
| GCTTGAGGAAGCTGGATGGA+AGG | + | chr5.3:64537587-64537606 | MS.gene29482:CDS | 55.0% | |
| TCACACGACATTGACCGACG+TGG | + | chr5.3:64537406-64537425 | MS.gene29482:intron | 55.0% | |
| TGCATTTGCGTCCAGTCCTC+TGG | - | chr5.3:64540673-64540692 | None:intergenic | 55.0% | |
| TGTACGCCAAACCAGAGGAC+TGG | + | chr5.3:64540659-64540678 | MS.gene29482:CDS | 55.0% | |
| TTGCGTCCAGTCCTCTGGTT+TGG | - | chr5.3:64540668-64540687 | None:intergenic | 55.0% | |
| ! | TGTATTTGGAACCCCCACGG+TGG | - | chr5.3:64539831-64539850 | None:intergenic | 55.0% |
| CGACACGACACTGACACAGG+TGG | + | chr5.3:64537232-64537251 | MS.gene29482:intron | 60.0% | |
| GAAATGGCGGCACGTGTGTG+AGG | - | chr5.3:64536824-64536843 | None:intergenic | 60.0% | |
| ! | GTGCGAGGGGCATGGAATAG+TGG | - | chr5.3:64536784-64536803 | None:intergenic | 60.0% |
| GCGGCACGTGTGTGAGGTGA+AGG | - | chr5.3:64536818-64536837 | None:intergenic | 65.0% | |
| TTCCATGCCCCTCGCACGTG+CGG | + | chr5.3:64536787-64536806 | MS.gene29482:CDS | 65.0% | |
| AAGGACGCACCGCACGTGCG+AGG | - | chr5.3:64536799-64536818 | None:intergenic | 70.0% | |
| AGGACGCACCGCACGTGCGA+GGG | - | chr5.3:64536798-64536817 | None:intergenic | 70.0% | |
| CACCGCACGTGCGAGGGGCA+TGG | - | chr5.3:64536792-64536811 | None:intergenic | 75.0% | |
| GGACGCACCGCACGTGCGAG+GGG | - | chr5.3:64536797-64536816 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 64536764 | 64540800 | 64536764 | ID=MS.gene29482 |
| chr5.3 | mRNA | 64536764 | 64540800 | 64536764 | ID=MS.gene29482.t1;Parent=MS.gene29482 |
| chr5.3 | exon | 64536764 | 64536943 | 64536764 | ID=MS.gene29482.t1.exon1;Parent=MS.gene29482.t1 |
| chr5.3 | CDS | 64536764 | 64536943 | 64536764 | ID=cds.MS.gene29482.t1;Parent=MS.gene29482.t1 |
| chr5.3 | exon | 64537065 | 64537140 | 64537065 | ID=MS.gene29482.t1.exon2;Parent=MS.gene29482.t1 |
| chr5.3 | CDS | 64537065 | 64537140 | 64537065 | ID=cds.MS.gene29482.t1;Parent=MS.gene29482.t1 |
| chr5.3 | exon | 64537565 | 64537662 | 64537565 | ID=MS.gene29482.t1.exon3;Parent=MS.gene29482.t1 |
| chr5.3 | CDS | 64537565 | 64537662 | 64537565 | ID=cds.MS.gene29482.t1;Parent=MS.gene29482.t1 |
| chr5.3 | exon | 64538154 | 64538255 | 64538154 | ID=MS.gene29482.t1.exon4;Parent=MS.gene29482.t1 |
| chr5.3 | CDS | 64538154 | 64538255 | 64538154 | ID=cds.MS.gene29482.t1;Parent=MS.gene29482.t1 |
| chr5.3 | exon | 64538391 | 64538477 | 64538391 | ID=MS.gene29482.t1.exon5;Parent=MS.gene29482.t1 |
| chr5.3 | CDS | 64538391 | 64538477 | 64538391 | ID=cds.MS.gene29482.t1;Parent=MS.gene29482.t1 |
| chr5.3 | exon | 64538717 | 64538833 | 64538717 | ID=MS.gene29482.t1.exon6;Parent=MS.gene29482.t1 |
| chr5.3 | CDS | 64538717 | 64538833 | 64538717 | ID=cds.MS.gene29482.t1;Parent=MS.gene29482.t1 |
| chr5.3 | exon | 64539794 | 64539897 | 64539794 | ID=MS.gene29482.t1.exon7;Parent=MS.gene29482.t1 |
| chr5.3 | CDS | 64539794 | 64539897 | 64539794 | ID=cds.MS.gene29482.t1;Parent=MS.gene29482.t1 |
| chr5.3 | exon | 64540133 | 64540272 | 64540133 | ID=MS.gene29482.t1.exon8;Parent=MS.gene29482.t1 |
| chr5.3 | CDS | 64540133 | 64540272 | 64540133 | ID=cds.MS.gene29482.t1;Parent=MS.gene29482.t1 |
| chr5.3 | exon | 64540375 | 64540511 | 64540375 | ID=MS.gene29482.t1.exon9;Parent=MS.gene29482.t1 |
| chr5.3 | CDS | 64540375 | 64540511 | 64540375 | ID=cds.MS.gene29482.t1;Parent=MS.gene29482.t1 |
| chr5.3 | exon | 64540612 | 64540800 | 64540612 | ID=MS.gene29482.t1.exon10;Parent=MS.gene29482.t1 |
| chr5.3 | CDS | 64540612 | 64540800 | 64540612 | ID=cds.MS.gene29482.t1;Parent=MS.gene29482.t1 |
| Gene Sequence |
| Protein sequence |
