Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29638.t1 | XP_003616632.1 | 96.4 | 591 | 21 | 0 | 1 | 591 | 1 | 591 | 0.00E+00 | 1173.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29638.t1 | Q8GV43 | 53.3 | 612 | 237 | 11 | 3 | 591 | 12 | 597 | 7.6e-178 | 625.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29638.t1 | G7KH08 | 96.4 | 591 | 21 | 0 | 1 | 591 | 1 | 591 | 0.0e+00 | 1173.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050963 | MS.gene29638 | 0.802649 | 5.08E-49 | -1.69E-46 |
| MS.gene052333 | MS.gene29638 | 0.800585 | 1.35E-48 | -1.69E-46 |
| MS.gene052674 | MS.gene29638 | 0.818338 | 2.06E-52 | -1.69E-46 |
| MS.gene052675 | MS.gene29638 | 0.815226 | 1.03E-51 | -1.69E-46 |
| MS.gene052677 | MS.gene29638 | 0.822403 | 2.41E-53 | -1.69E-46 |
| MS.gene056779 | MS.gene29638 | 0.810725 | 1.00E-50 | -1.69E-46 |
| MS.gene060011 | MS.gene29638 | 0.802099 | 6.59E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29638.t1 | MTR_5g082580 | 96.447 | 591 | 21 | 0 | 1 | 591 | 1 | 591 | 0.0 | 1198 |
| MS.gene29638.t1 | MTR_5g082590 | 59.589 | 584 | 217 | 7 | 8 | 591 | 2 | 566 | 0.0 | 702 |
| MS.gene29638.t1 | MTR_3g070710 | 58.793 | 580 | 219 | 10 | 14 | 591 | 10 | 571 | 0.0 | 658 |
| MS.gene29638.t1 | MTR_3g070560 | 59.487 | 585 | 213 | 11 | 12 | 591 | 7 | 572 | 0.0 | 652 |
| MS.gene29638.t1 | MTR_5g071010 | 53.846 | 585 | 256 | 6 | 11 | 591 | 4 | 578 | 0.0 | 632 |
| MS.gene29638.t1 | MTR_5g082620 | 50.512 | 586 | 267 | 9 | 11 | 591 | 6 | 573 | 0.0 | 575 |
| MS.gene29638.t1 | MTR_3g070720 | 51.552 | 580 | 254 | 8 | 19 | 591 | 18 | 577 | 0.0 | 556 |
| MS.gene29638.t1 | MTR_3g069280 | 51.813 | 579 | 245 | 9 | 19 | 591 | 6 | 556 | 0.0 | 554 |
| MS.gene29638.t1 | MTR_3g070560 | 60.097 | 411 | 146 | 9 | 185 | 591 | 3 | 399 | 1.19e-167 | 483 |
| MS.gene29638.t1 | MTR_5g071040 | 45.455 | 583 | 271 | 10 | 11 | 591 | 20 | 557 | 3.41e-167 | 488 |
| MS.gene29638.t1 | MTR_3g070720 | 50.000 | 500 | 223 | 8 | 19 | 511 | 18 | 497 | 1.04e-154 | 453 |
| MS.gene29638.t1 | MTR_3g070720 | 48.941 | 472 | 214 | 8 | 19 | 483 | 18 | 469 | 2.17e-137 | 409 |
| MS.gene29638.t1 | MTR_3g070720 | 47.506 | 421 | 194 | 8 | 19 | 432 | 18 | 418 | 2.98e-112 | 342 |
| MS.gene29638.t1 | MTR_3g070730 | 52.727 | 55 | 26 | 0 | 509 | 563 | 4 | 58 | 1.69e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29638.t1 | AT2G40116 | 53.344 | 613 | 237 | 11 | 2 | 591 | 11 | 597 | 0.0 | 630 |
| MS.gene29638.t1 | AT5G58700 | 51.448 | 587 | 264 | 8 | 11 | 591 | 10 | 581 | 0.0 | 591 |
| MS.gene29638.t1 | AT5G58700 | 51.448 | 587 | 264 | 8 | 11 | 591 | 10 | 581 | 0.0 | 591 |
| MS.gene29638.t1 | AT5G58690 | 49.829 | 586 | 258 | 6 | 11 | 591 | 8 | 562 | 0.0 | 573 |
| MS.gene29638.t1 | AT5G58690 | 49.829 | 586 | 258 | 6 | 11 | 591 | 8 | 562 | 0.0 | 573 |
| MS.gene29638.t1 | AT5G58690 | 50.702 | 570 | 245 | 6 | 27 | 591 | 5 | 543 | 0.0 | 572 |
| MS.gene29638.t1 | AT3G08510 | 50.257 | 583 | 265 | 9 | 11 | 591 | 6 | 565 | 0.0 | 572 |
| MS.gene29638.t1 | AT3G08510 | 50.257 | 583 | 265 | 9 | 11 | 591 | 6 | 565 | 0.0 | 572 |
| MS.gene29638.t1 | AT3G55940 | 50.596 | 587 | 258 | 11 | 11 | 590 | 6 | 567 | 0.0 | 563 |
| MS.gene29638.t1 | AT5G58700 | 54.906 | 479 | 201 | 6 | 119 | 591 | 4 | 473 | 2.80e-180 | 518 |
| MS.gene29638.t1 | AT3G08510 | 46.998 | 583 | 255 | 10 | 11 | 591 | 6 | 536 | 5.34e-176 | 510 |
| MS.gene29638.t1 | AT3G08510 | 46.998 | 583 | 255 | 10 | 11 | 591 | 6 | 536 | 5.34e-176 | 510 |
| MS.gene29638.t1 | AT5G58670 | 44.274 | 585 | 272 | 12 | 11 | 589 | 5 | 541 | 6.66e-166 | 484 |
| MS.gene29638.t1 | AT4G38530 | 44.000 | 575 | 271 | 12 | 19 | 589 | 13 | 540 | 8.99e-158 | 464 |
| MS.gene29638.t1 | AT3G47290 | 38.600 | 557 | 273 | 14 | 38 | 591 | 25 | 515 | 2.50e-112 | 346 |
| MS.gene29638.t1 | AT3G47290 | 38.600 | 557 | 273 | 14 | 38 | 591 | 25 | 515 | 8.37e-112 | 346 |
| MS.gene29638.t1 | AT3G47220 | 38.095 | 546 | 255 | 16 | 55 | 591 | 44 | 515 | 7.44e-105 | 327 |
Find 109 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCCTTAAGTTTCTTATTT+TGG | 0.118300 | 5.1:-64662325 | None:intergenic |
| CGAGGAGAATTTCACGTTAT+TGG | 0.170735 | 5.1:+64660930 | MS.gene29638:CDS |
| GTGTTATAGAACTTGATTTA+TGG | 0.172616 | 5.1:+64661479 | MS.gene29638:CDS |
| CTTGATCTTTGTCTCTTACT+TGG | 0.245149 | 5.1:-64664454 | None:intergenic |
| AGTTTCTGCATTAAAATTTC+AGG | 0.250213 | 5.1:-64663278 | None:intergenic |
| TTGGAGTCTATCAAGAAATA+TGG | 0.288156 | 5.1:+64661672 | MS.gene29638:CDS |
| GGACACAATTCCTTCCTTAC+TGG | 0.299080 | 5.1:+64661394 | MS.gene29638:CDS |
| CAGATGGCAACTCAAATATT+TGG | 0.332400 | 5.1:+64661863 | MS.gene29638:intron |
| TTGACTGGCATAATCCTTGT+AGG | 0.334674 | 5.1:-64663323 | None:intergenic |
| TGTTGCAGCGCCTTTATGAT+TGG | 0.348377 | 5.1:-64661448 | None:intergenic |
| GAAGAAAACAAAAGTAATAA+TGG | 0.354019 | 5.1:+64664358 | MS.gene29638:CDS |
| TCACATTATTTCATATATAC+AGG | 0.373381 | 5.1:+64661373 | MS.gene29638:CDS |
| GAGGGAGACGCGGGTTCATA+TGG | 0.374246 | 5.1:+64662245 | MS.gene29638:CDS |
| AATCCAAAATAAGAAACTTA+AGG | 0.376008 | 5.1:+64662322 | MS.gene29638:CDS |
| CAAAAGTAATAATGGACAAT+TGG | 0.378453 | 5.1:+64664366 | MS.gene29638:CDS |
| GGCAACTATCATGCTCTAGA+TGG | 0.380322 | 5.1:+64662025 | MS.gene29638:CDS |
| TGTATCACCTATCAAATGTT+TGG | 0.381688 | 5.1:+64661653 | MS.gene29638:CDS |
| CCAGTTGCAGAGCTAAAACT+TGG | 0.382110 | 5.1:+64664512 | MS.gene29638:CDS |
| TTATGACAGGTTGGAATTGT+TGG | 0.385274 | 5.1:+64664314 | MS.gene29638:intron |
| CCACATCTTGGTTGGATGTA+TGG | 0.385766 | 5.1:+64662605 | MS.gene29638:CDS |
| TCCACTTCAATTGTAGAATC+TGG | 0.391302 | 5.1:-64662091 | None:intergenic |
| ATAGACTCCAAACATTTGAT+AGG | 0.395008 | 5.1:-64661660 | None:intergenic |
| ACAAATTTCAAGCCACATCT+TGG | 0.397778 | 5.1:+64662593 | MS.gene29638:CDS |
| TTCTTCCTTGCAATGTCAGC+AGG | 0.404340 | 5.1:-64664341 | None:intergenic |
| ATCCAAAATAAGAAACTTAA+GGG | 0.420003 | 5.1:+64662323 | MS.gene29638:CDS |
| TGCTTAGTTGATTTCCAGTA+AGG | 0.430931 | 5.1:-64661408 | None:intergenic |
| AAACATTTGATAGGTGATAC+AGG | 0.433878 | 5.1:-64661651 | None:intergenic |
| CTCATGGAACAGACATCATT+AGG | 0.435189 | 5.1:+64662429 | MS.gene29638:CDS |
| ATATCTTCTTTACTAGAAGT+TGG | 0.441522 | 5.1:-64661502 | None:intergenic |
| AGTCCCTTTATATAATGAAA+AGG | 0.442307 | 5.1:+64664544 | MS.gene29638:CDS |
| CAGGGAATGTTCAGAGCAAA+TGG | 0.442876 | 5.1:+64663233 | MS.gene29638:CDS |
| CAGATCACTCTGGTTGATGC+AGG | 0.447460 | 5.1:+64663214 | MS.gene29638:CDS |
| GGAGGAAAAGATGACTTTGC+TGG | 0.448423 | 5.1:+64664476 | MS.gene29638:CDS |
| AGGTTGTTTCGCTCCAACTT+AGG | 0.451502 | 5.1:-64662388 | None:intergenic |
| GATTTGACACGTGTCGCCCT+AGG | 0.453433 | 5.1:-64662569 | None:intergenic |
| CTGACCTTTGTGTAAAAGTC+TGG | 0.458406 | 5.1:-64663519 | None:intergenic |
| CTTAAACATTCTGCTGGTTG+AGG | 0.462468 | 5.1:-64661902 | None:intergenic |
| TTGGACTTAAAACGTTCTTT+CGG | 0.467487 | 5.1:-64661986 | None:intergenic |
| AAAGTACAAGGTGACTGAAC+TGG | 0.469738 | 5.1:+64660807 | MS.gene29638:CDS |
| GAAGATATTAAAGTTGATCA+TGG | 0.470581 | 5.1:+64661517 | MS.gene29638:CDS |
| GCCGTTGTCCTTGATCCGGT+TGG | 0.472915 | 5.1:-64662005 | None:intergenic |
| TCGCCCTTGATGATATCTTC+CGG | 0.475989 | 5.1:+64661040 | MS.gene29638:CDS |
| GATGGTTGCATTCAATATGC+AGG | 0.480468 | 5.1:+64662634 | MS.gene29638:CDS |
| GTTAAACTTAAACATTCTGC+TGG | 0.482099 | 5.1:-64661908 | None:intergenic |
| AAAATCTCCTTGAGGTCCTC+AGG | 0.484345 | 5.1:-64660835 | None:intergenic |
| CAGTGAAGAACCAATCATAA+AGG | 0.485723 | 5.1:+64661438 | MS.gene29638:CDS |
| GTCCCTTTATATAATGAAAA+GGG | 0.487512 | 5.1:+64664545 | MS.gene29638:CDS |
| ATTTCAAGCCACATCTTGGT+TGG | 0.488655 | 5.1:+64662597 | MS.gene29638:CDS |
| ATATACTTAGGGTGTACCCT+AGG | 0.488798 | 5.1:+64662552 | MS.gene29638:CDS |
| GAGCGAAACAACCTTAGAAA+AGG | 0.490928 | 5.1:+64662397 | MS.gene29638:CDS |
| ATCTGAAGTAAAGCAAGCTC+TGG | 0.493385 | 5.1:-64664431 | None:intergenic |
| TTTAACAGAATTTCCTTCAC+CGG | 0.497230 | 5.1:+64661925 | MS.gene29638:CDS |
| CGGTTTCTTGTGGAGCATCA+AGG | 0.501212 | 5.1:+64660907 | MS.gene29638:CDS |
| GTGAACTTAGACGCCTAAGT+TGG | 0.503997 | 5.1:+64662375 | MS.gene29638:CDS |
| GCAAGCTCTGGAACAGTCAA+AGG | 0.505738 | 5.1:-64664419 | None:intergenic |
| TCTTCTATAGTTATGATCAC+TGG | 0.505821 | 5.1:-64661714 | None:intergenic |
| CAAGTAAGAGACAAAGATCA+AGG | 0.506378 | 5.1:+64664455 | MS.gene29638:CDS |
| GCAATTACATCGGTTTCTTG+TGG | 0.510508 | 5.1:+64660897 | MS.gene29638:CDS |
| AGTTGCCGTTGTCCTTGATC+CGG | 0.511054 | 5.1:-64662009 | None:intergenic |
| GAAAAGGCTTCAGAATCTCA+TGG | 0.512234 | 5.1:+64662413 | MS.gene29638:CDS |
| AAGGAGCATTGAAATCATCT+AGG | 0.512950 | 5.1:-64661071 | None:intergenic |
| TTTCTTCCTCGATAGGGGTT+AGG | 0.516858 | 5.1:+64663191 | MS.gene29638:intron |
| AAGATGTGGCTTGAAATTTG+TGG | 0.522605 | 5.1:-64662591 | None:intergenic |
| ATCATCAGAAGAAGAATCAT+CGG | 0.530210 | 5.1:+64662057 | MS.gene29638:CDS |
| GCAGCTGAGAAGGATACATC+AGG | 0.533113 | 5.1:+64660981 | MS.gene29638:CDS |
| TTCAGAGCAAATGGAGGATG+TGG | 0.534038 | 5.1:+64663242 | MS.gene29638:CDS |
| TCATCAGAAGAAGAATCATC+GGG | 0.538026 | 5.1:+64662058 | MS.gene29638:CDS |
| TAGTTGATTTCCAGTAAGGA+AGG | 0.543182 | 5.1:-64661404 | None:intergenic |
| TGAAGTGGAGATTAATAGTA+CGG | 0.546568 | 5.1:+64662105 | MS.gene29638:CDS |
| AAATTTACATGGGACATGGT+TGG | 0.547253 | 5.1:+64663454 | MS.gene29638:CDS |
| GCCAGATTCTACAATTGAAG+TGG | 0.550059 | 5.1:+64662090 | MS.gene29638:CDS |
| ACAATGAGTTTGATCCTACA+AGG | 0.550530 | 5.1:+64663309 | MS.gene29638:CDS |
| GACTTAAAACGTTCTTTCGG+AGG | 0.550648 | 5.1:-64661983 | None:intergenic |
| AATGGAAGTGATAGCGATGA+GGG | 0.559246 | 5.1:+64662227 | MS.gene29638:CDS |
| CAATGCTCCTTTGAAAACCG+AGG | 0.563473 | 5.1:+64661083 | MS.gene29638:CDS |
| ATTTGACACGTGTCGCCCTA+GGG | 0.563743 | 5.1:-64662568 | None:intergenic |
| ATCATAAAGGCGCTGCAACA+AGG | 0.565020 | 5.1:+64661451 | MS.gene29638:CDS |
| GACTGAACTGGTTCCACCTG+AGG | 0.567204 | 5.1:+64660819 | MS.gene29638:CDS |
| AGAAGAAGAATCATCGGGAA+AGG | 0.569568 | 5.1:+64662063 | MS.gene29638:CDS |
| CAAGCTCTGGAACAGTCAAA+GGG | 0.571677 | 5.1:-64664418 | None:intergenic |
| GGTTCCACCTGAGGACCTCA+AGG | 0.573335 | 5.1:+64660828 | MS.gene29638:CDS |
| TTGGATGTATGGAGCTCAGA+TGG | 0.573916 | 5.1:+64662616 | MS.gene29638:CDS |
| ATTATTTCAAGAGTGTTCAC+CGG | 0.574429 | 5.1:+64662280 | MS.gene29638:CDS |
| TGACATGTATGATCCTCCTC+CGG | 0.578192 | 5.1:-64660869 | None:intergenic |
| AGGGGTTAGGCAGATCACTC+TGG | 0.583024 | 5.1:+64663204 | MS.gene29638:intron |
| ATGTTGATCAAAGTAGAGAA+AGG | 0.584587 | 5.1:+64661013 | MS.gene29638:CDS |
| ATATTAAAGTTGATCATGGA+TGG | 0.592217 | 5.1:+64661521 | MS.gene29638:CDS |
| ATCTCCTTGAGGTCCTCAGG+TGG | 0.594384 | 5.1:-64660832 | None:intergenic |
| AAAGATAAATTGAAAACTGA+TGG | 0.597987 | 5.1:+64662353 | MS.gene29638:CDS |
| AGATCACTCTGGTTGATGCA+GGG | 0.605342 | 5.1:+64663215 | MS.gene29638:CDS |
| ACCTTTGTGTAAAAGTCTGG+TGG | 0.605391 | 5.1:-64663516 | None:intergenic |
| TCAAATTCTTCATTCCACAC+AGG | 0.609602 | 5.1:-64664392 | None:intergenic |
| AAAACCGGAAGATATCATCA+AGG | 0.612633 | 5.1:-64661044 | None:intergenic |
| GAGAACATATCAAAGTGTGT+AGG | 0.615726 | 5.1:-64663492 | None:intergenic |
| TGATAGCGATGAGGGAGACG+CGG | 0.617630 | 5.1:+64662235 | MS.gene29638:CDS |
| GATAGCGATGAGGGAGACGC+GGG | 0.620564 | 5.1:+64662236 | MS.gene29638:CDS |
| TATACTTAGGGTGTACCCTA+GGG | 0.624728 | 5.1:+64662553 | MS.gene29638:CDS |
| AAGAAACCGATGTAATTGCT+CGG | 0.626617 | 5.1:-64660893 | None:intergenic |
| TGGACAATTGGTTTCCTGTG+TGG | 0.630722 | 5.1:+64664378 | MS.gene29638:CDS |
| CCATACATCCAACCAAGATG+TGG | 0.631436 | 5.1:-64662605 | None:intergenic |
| GTATGCCTGCTGACATTGCA+AGG | 0.644882 | 5.1:+64664336 | MS.gene29638:CDS |
| TATATGAAATAATGTGACAA+TGG | 0.645807 | 5.1:-64661367 | None:intergenic |
| TCTTGTGGAGCATCAAGGCG+AGG | 0.647884 | 5.1:+64660912 | MS.gene29638:CDS |
| AAACCGGAAGATATCATCAA+GGG | 0.650005 | 5.1:-64661043 | None:intergenic |
| GAATGGAAGTGATAGCGATG+AGG | 0.651551 | 5.1:+64662226 | MS.gene29638:intron |
| GGAATGTTCAGAGCAAATGG+AGG | 0.692479 | 5.1:+64663236 | MS.gene29638:CDS |
| TCCAACCGGATCAAGGACAA+CGG | 0.693783 | 5.1:+64662004 | MS.gene29638:CDS |
| TGTCAACCGAGCAATTACAT+CGG | 0.739747 | 5.1:+64660887 | MS.gene29638:CDS |
| GTAAGAGACAAAGATCAAGG+AGG | 0.747239 | 5.1:+64664458 | MS.gene29638:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATCATGTTAAAATATAAATA+GGG | + | chr5.1:64662893-64662912 | MS.gene29638:intron | 10.0% |
| !!! | AATTTCAAGATTTAATTTAT+TGG | - | chr5.1:64662944-64662963 | None:intergenic | 10.0% |
| !!! | TTTTTTAATAGAAAAAATTG+AGG | + | chr5.1:64664069-64664088 | MS.gene29638:intron | 10.0% |
| !! | CATCATGTTAAAATATAAAT+AGG | + | chr5.1:64662892-64662911 | MS.gene29638:intron | 15.0% |
| !! | TAACAAACAATATATTAAGT+TGG | - | chr5.1:64663683-64663702 | None:intergenic | 15.0% |
| !! | TATTGTTTATATAGTCTAAA+TGG | - | chr5.1:64661549-64661568 | None:intergenic | 15.0% |
| !!! | AGATTTAATTTATTGGAAAT+TGG | - | chr5.1:64662937-64662956 | None:intergenic | 15.0% |
| !!! | ATAAGATAAATTCTTTTGTT+TGG | + | chr5.1:64663390-64663409 | MS.gene29638:intron | 15.0% |
| !!! | TTTTTTTGTTTTTATCAGAA+TGG | + | chr5.1:64662209-64662228 | MS.gene29638:intron | 15.0% |
| !! | AAAGATAAATTGAAAACTGA+TGG | + | chr5.1:64662353-64662372 | MS.gene29638:CDS | 20.0% |
| !! | AAAGTAGTAGGAAAAAAAAA+AGG | - | chr5.1:64663173-64663192 | None:intergenic | 20.0% |
| !! | AATCCAAAATAAGAAACTTA+AGG | + | chr5.1:64662322-64662341 | MS.gene29638:CDS | 20.0% |
| !! | ATAACAGGTAAAAATTTACA+TGG | + | chr5.1:64663443-64663462 | MS.gene29638:intron | 20.0% |
| !! | ATCCAAAATAAGAAACTTAA+GGG | + | chr5.1:64662323-64662342 | MS.gene29638:CDS | 20.0% |
| !! | ATGAATATTGAGATTAGAAA+AGG | - | chr5.1:64661808-64661827 | None:intergenic | 20.0% |
| !! | ATGATATCATGTTTAATAAC+AGG | + | chr5.1:64663428-64663447 | MS.gene29638:intron | 20.0% |
| !! | ATTATATCAAAATACACGAA+AGG | - | chr5.1:64661280-64661299 | None:intergenic | 20.0% |
| !! | CACACAAAAAAATATACTTA+GGG | + | chr5.1:64662541-64662560 | MS.gene29638:CDS | 20.0% |
| !! | GAAGAAAACAAAAGTAATAA+TGG | + | chr5.1:64664358-64664377 | MS.gene29638:CDS | 20.0% |
| !! | GAGAAATAATCCAAAAATAT+TGG | - | chr5.1:64663591-64663610 | None:intergenic | 20.0% |
| !! | TAACAAAACTAGAAAACTTA+AGG | - | chr5.1:64661249-64661268 | None:intergenic | 20.0% |
| !! | TAACAGGTAAAAATTTACAT+GGG | + | chr5.1:64663444-64663463 | MS.gene29638:intron | 20.0% |
| !! | TACCATATCATATCTTATAA+AGG | + | chr5.1:64663139-64663158 | MS.gene29638:intron | 20.0% |
| !! | TATATGAAATAATGTGACAA+TGG | - | chr5.1:64661370-64661389 | None:intergenic | 20.0% |
| !! | TCACACAAAAAAATATACTT+AGG | + | chr5.1:64662540-64662559 | MS.gene29638:CDS | 20.0% |
| !! | TCACATTATTTCATATATAC+AGG | + | chr5.1:64661373-64661392 | MS.gene29638:CDS | 20.0% |
| !! | TGAAATAATTTGACAAAGAT+TGG | - | chr5.1:64661222-64661241 | None:intergenic | 20.0% |
| !! | TTCCTTTATAAGATATGATA+TGG | - | chr5.1:64663144-64663163 | None:intergenic | 20.0% |
| !!! | ATAATCCAAAAATATTGGTT+TGG | - | chr5.1:64663586-64663605 | None:intergenic | 20.0% |
| !!! | CTACTTTTTCAAATTATTGT+CGG | + | chr5.1:64663065-64663084 | MS.gene29638:intron | 20.0% |
| !!! | TATTGTTTGTTACAATACAA+AGG | + | chr5.1:64663691-64663710 | MS.gene29638:intron | 20.0% |
| ! | AGTATTACCAATGTAAGATT+AGG | + | chr5.1:64663873-64663892 | MS.gene29638:intron | 25.0% |
| ! | AGTCCCTTTATATAATGAAA+AGG | + | chr5.1:64664544-64664563 | MS.gene29638:CDS | 25.0% |
| ! | AGTTTCTGCATTAAAATTTC+AGG | - | chr5.1:64663281-64663300 | None:intergenic | 25.0% |
| ! | ATATCTTCTTTACTAGAAGT+TGG | - | chr5.1:64661505-64661524 | None:intergenic | 25.0% |
| ! | ATATGTGTATATCTTACAGT+TGG | + | chr5.1:64664283-64664302 | MS.gene29638:intron | 25.0% |
| ! | GACAAATAACACACTATATT+TGG | + | chr5.1:64663752-64663771 | MS.gene29638:intron | 25.0% |
| ! | GTATTACCAATGTAAGATTA+GGG | + | chr5.1:64663874-64663893 | MS.gene29638:intron | 25.0% |
| ! | GTGTTATAGAACTTGATTTA+TGG | + | chr5.1:64661479-64661498 | MS.gene29638:CDS | 25.0% |
| ! | TAAAATTGAGTAACGTACTA+TGG | - | chr5.1:64663371-64663390 | None:intergenic | 25.0% |
| ! | TACTTGAAACAGTTGTAAAA+TGG | - | chr5.1:64664133-64664152 | None:intergenic | 25.0% |
| ! | TATTGCACAAGAATTATGAA+AGG | - | chr5.1:64663634-64663653 | None:intergenic | 25.0% |
| ! | TCTCTCTATCACAATTAAAA+AGG | + | chr5.1:64662725-64662744 | MS.gene29638:intron | 25.0% |
| ! | TTGAAAATGTTGTTAGAAAG+TGG | + | chr5.1:64662770-64662789 | MS.gene29638:intron | 25.0% |
| !! | AAAGTCCAAACCAATATTTT+TGG | + | chr5.1:64663578-64663597 | MS.gene29638:intron | 25.0% |
| !! | ATATTAAAGTTGATCATGGA+TGG | + | chr5.1:64661521-64661540 | MS.gene29638:CDS | 25.0% |
| !! | GAAGATATTAAAGTTGATCA+TGG | + | chr5.1:64661517-64661536 | MS.gene29638:CDS | 25.0% |
| !! | GTTATTATGCTTTTGTAATC+CGG | - | chr5.1:64662302-64662321 | None:intergenic | 25.0% |
| !! | GTTCTTTATCAAAAAGTACA+AGG | + | chr5.1:64660795-64660814 | MS.gene29638:CDS | 25.0% |
| !!! | AAAAATATTGGTTTGGACTT+TGG | - | chr5.1:64663579-64663598 | None:intergenic | 25.0% |
| !!! | CAAAAGTAATAATGGACAAT+TGG | + | chr5.1:64664366-64664385 | MS.gene29638:CDS | 25.0% |
| !!! | TACCCTTAAGTTTCTTATTT+TGG | - | chr5.1:64662328-64662347 | None:intergenic | 25.0% |
| !!! | TATATTTTTTTGTGTGAACC+TGG | - | chr5.1:64662537-64662556 | None:intergenic | 25.0% |
| AAACATTTGATAGGTGATAC+AGG | - | chr5.1:64661654-64661673 | None:intergenic | 30.0% | |
| AAGCGACTTATAATTTAGGA+CGG | + | chr5.1:64663846-64663865 | MS.gene29638:intron | 30.0% | |
| ACTCATAAAAAATCTCCTTG+AGG | - | chr5.1:64660846-64660865 | None:intergenic | 30.0% | |
| AGTTTGACCTAGAAACTTTA+AGG | - | chr5.1:64664172-64664191 | None:intergenic | 30.0% | |
| ATAGACTCCAAACATTTGAT+AGG | - | chr5.1:64661663-64661682 | None:intergenic | 30.0% | |
| ATCATCAGAAGAAGAATCAT+CGG | + | chr5.1:64662057-64662076 | MS.gene29638:CDS | 30.0% | |
| ATGTTGATCAAAGTAGAGAA+AGG | + | chr5.1:64661013-64661032 | MS.gene29638:CDS | 30.0% | |
| ATTCAAACTGTTATTCTTCC+AGG | + | chr5.1:64662516-64662535 | MS.gene29638:intron | 30.0% | |
| CATGGAAATGGAATAATAGT+GGG | + | chr5.1:64662803-64662822 | MS.gene29638:intron | 30.0% | |
| CCAAAAGCAGCTAATATATA+AGG | - | chr5.1:64663555-64663574 | None:intergenic | 30.0% | |
| GCATCTATAAATGTCATTAC+AGG | + | chr5.1:64661324-64661343 | MS.gene29638:intron | 30.0% | |
| GTAAAAATTTACATGGGACA+TGG | + | chr5.1:64663450-64663469 | MS.gene29638:CDS | 30.0% | |
| GTTAAACTTAAACATTCTGC+TGG | - | chr5.1:64661911-64661930 | None:intergenic | 30.0% | |
| GTTTGAATCAGATAAACCAT+AGG | - | chr5.1:64662504-64662523 | None:intergenic | 30.0% | |
| TACGAATTTCACTCATAACA+AGG | + | chr5.1:64664031-64664050 | MS.gene29638:intron | 30.0% | |
| TCATGGAAATGGAATAATAG+TGG | + | chr5.1:64662802-64662821 | MS.gene29638:intron | 30.0% | |
| TCCAAAGCGACTTATAATTT+AGG | + | chr5.1:64663842-64663861 | MS.gene29638:intron | 30.0% | |
| TCCTAAATTATAAGTCGCTT+TGG | - | chr5.1:64663846-64663865 | None:intergenic | 30.0% | |
| TCTTCTATAGTTATGATCAC+TGG | - | chr5.1:64661717-64661736 | None:intergenic | 30.0% | |
| TCTTGTGATCATTGATATAG+TGG | + | chr5.1:64663914-64663933 | MS.gene29638:intron | 30.0% | |
| TGAAGTGGAGATTAATAGTA+CGG | + | chr5.1:64662105-64662124 | MS.gene29638:CDS | 30.0% | |
| TGTAAACCCTAATCTTACAT+TGG | - | chr5.1:64663883-64663902 | None:intergenic | 30.0% | |
| TGTATCACCTATCAAATGTT+TGG | + | chr5.1:64661653-64661672 | MS.gene29638:CDS | 30.0% | |
| TTGGACTTAAAACGTTCTTT+CGG | - | chr5.1:64661989-64662008 | None:intergenic | 30.0% | |
| TTGGAGTCTATCAAGAAATA+TGG | + | chr5.1:64661672-64661691 | MS.gene29638:CDS | 30.0% | |
| TTTAACAGAATTTCCTTCAC+CGG | + | chr5.1:64661925-64661944 | MS.gene29638:CDS | 30.0% | |
| ! | AAATTATAAGTCGCTTTGGA+GGG | - | chr5.1:64663842-64663861 | None:intergenic | 30.0% |
| ! | AAGTTAATCCACTTGTCTTT+TGG | - | chr5.1:64663108-64663127 | None:intergenic | 30.0% |
| ! | ACCTTTAATGTCTTTTTGAC+TGG | - | chr5.1:64663341-64663360 | None:intergenic | 30.0% |
| ! | ATCTATATTCTTTTGAGCTG+GGG | - | chr5.1:64663720-64663739 | None:intergenic | 30.0% |
| ! | CATCTATATTCTTTTGAGCT+GGG | - | chr5.1:64663721-64663740 | None:intergenic | 30.0% |
| ! | TAAATTATAAGTCGCTTTGG+AGG | - | chr5.1:64663843-64663862 | None:intergenic | 30.0% |
| ! | TCATCTATATTCTTTTGAGC+TGG | - | chr5.1:64663722-64663741 | None:intergenic | 30.0% |
| !! | ACTCGATTTTTCAATGATTC+CGG | - | chr5.1:64661947-64661966 | None:intergenic | 30.0% |
| !! | ATTATTTCAAGAGTGTTCAC+CGG | + | chr5.1:64662280-64662299 | MS.gene29638:CDS | 30.0% |
| !! | CCTTATATATTAGCTGCTTT+TGG | + | chr5.1:64663552-64663571 | MS.gene29638:intron | 30.0% |
| !!! | GAGATTTTTTATGAGTTTGC+CGG | + | chr5.1:64660850-64660869 | MS.gene29638:CDS | 30.0% |
| !!! | GATTAGTTTTTATGACAGGT+TGG | + | chr5.1:64664305-64664324 | MS.gene29638:intron | 30.0% |
| !!! | GTTGGATTAGTTTTTATGAC+AGG | + | chr5.1:64664301-64664320 | MS.gene29638:intron | 30.0% |
| AAAACCGGAAGATATCATCA+AGG | - | chr5.1:64661047-64661066 | None:intergenic | 35.0% | |
| AAACCGGAAGATATCATCAA+GGG | - | chr5.1:64661046-64661065 | None:intergenic | 35.0% | |
| AAATTTACATGGGACATGGT+TGG | + | chr5.1:64663454-64663473 | MS.gene29638:CDS | 35.0% | |
| AAGAAACCGATGTAATTGCT+CGG | - | chr5.1:64660896-64660915 | None:intergenic | 35.0% | |
| AAGATGTGGCTTGAAATTTG+TGG | - | chr5.1:64662594-64662613 | None:intergenic | 35.0% | |
| AATCATCTAGGAGCAAAAAC+CGG | - | chr5.1:64661062-64661081 | None:intergenic | 35.0% | |
| ACAAATTTCAAGCCACATCT+TGG | + | chr5.1:64662593-64662612 | MS.gene29638:CDS | 35.0% | |
| ACAATGAGTTTGATCCTACA+AGG | + | chr5.1:64663309-64663328 | MS.gene29638:CDS | 35.0% | |
| AGATTAGGGTTTACATGATG+CGG | + | chr5.1:64663888-64663907 | MS.gene29638:intron | 35.0% | |
| ATAAACCATAGGACACTGTA+AGG | - | chr5.1:64662493-64662512 | None:intergenic | 35.0% | |
| CAAGTAAGAGACAAAGATCA+AGG | + | chr5.1:64664455-64664474 | MS.gene29638:CDS | 35.0% | |
| CAGATGGCAACTCAAATATT+TGG | + | chr5.1:64661863-64661882 | MS.gene29638:intron | 35.0% | |
| CAGTGAAGAACCAATCATAA+AGG | + | chr5.1:64661438-64661457 | MS.gene29638:CDS | 35.0% | |
| CTTCGTACCTTAAAGTTTCT+AGG | + | chr5.1:64664162-64664181 | MS.gene29638:intron | 35.0% | |
| CTTGATCTTTGTCTCTTACT+TGG | - | chr5.1:64664457-64664476 | None:intergenic | 35.0% | |
| GAGAACATATCAAAGTGTGT+AGG | - | chr5.1:64663495-64663514 | None:intergenic | 35.0% | |
| GCCAGTCAAAAAGACATTAA+AGG | + | chr5.1:64663337-64663356 | MS.gene29638:CDS | 35.0% | |
| GCTTTCTTGTTAGCAAAGTA+AGG | - | chr5.1:64661306-64661325 | None:intergenic | 35.0% | |
| TATCGAGGAAGAAAAGTAGT+AGG | - | chr5.1:64663185-64663204 | None:intergenic | 35.0% | |
| TCAAATTCTTCATTCCACAC+AGG | - | chr5.1:64664395-64664414 | None:intergenic | 35.0% | |
| TCATCAGAAGAAGAATCATC+GGG | + | chr5.1:64662058-64662077 | MS.gene29638:CDS | 35.0% | |
| TCCACTTCAATTGTAGAATC+TGG | - | chr5.1:64662094-64662113 | None:intergenic | 35.0% | |
| TGCATTCAATATGCAGGTTA+GGG | + | chr5.1:64662640-64662659 | MS.gene29638:intron | 35.0% | |
| TTGCATTCAATATGCAGGTT+AGG | + | chr5.1:64662639-64662658 | MS.gene29638:intron | 35.0% | |
| ! | AATTTTTGCTAGCAAGCGAT+TGG | + | chr5.1:64662960-64662979 | MS.gene29638:intron | 35.0% |
| ! | ATAAGATTTTGCAGCTGAGA+AGG | + | chr5.1:64660971-64660990 | MS.gene29638:CDS | 35.0% |
| ! | GAAAGTGGTGTTTCTTTTCA+TGG | + | chr5.1:64662785-64662804 | MS.gene29638:intron | 35.0% |
| ! | GACTTATAATTTAGGACGGA+GGG | + | chr5.1:64663850-64663869 | MS.gene29638:intron | 35.0% |
| ! | GGTGTTTCTTTTCATGGAAA+TGG | + | chr5.1:64662791-64662810 | MS.gene29638:intron | 35.0% |
| ! | TAGTTGATTTCCAGTAAGGA+AGG | - | chr5.1:64661407-64661426 | None:intergenic | 35.0% |
| ! | TGCTTAGTTGATTTCCAGTA+AGG | - | chr5.1:64661411-64661430 | None:intergenic | 35.0% |
| ! | TTATGACAGGTTGGAATTGT+TGG | + | chr5.1:64664314-64664333 | MS.gene29638:intron | 35.0% |
| ! | TTGATTTTTGTCACTGTCAC+AGG | + | chr5.1:64661616-64661635 | MS.gene29638:intron | 35.0% |
| !! | AAGAACGTTTTAAGTCCAAC+CGG | + | chr5.1:64661990-64662009 | MS.gene29638:CDS | 35.0% |
| !! | AAGGAGCATTGAAATCATCT+AGG | - | chr5.1:64661074-64661093 | None:intergenic | 35.0% |
| !! | ACTACTTTTCTTCCTCGATA+GGG | + | chr5.1:64663185-64663204 | MS.gene29638:intron | 35.0% |
| !! | TACTACTTTTCTTCCTCGAT+AGG | + | chr5.1:64663184-64663203 | MS.gene29638:intron | 35.0% |
| !! | TTTTTCAATGATTCCGGTGA+AGG | - | chr5.1:64661941-64661960 | None:intergenic | 35.0% |
| !!! | AGATTCTGAAGCCTTTTCTA+AGG | - | chr5.1:64662411-64662430 | None:intergenic | 35.0% |
| !!! | ATTTTTTATGAGTTTGCCGG+AGG | + | chr5.1:64660853-64660872 | MS.gene29638:CDS | 35.0% |
| AAAGTACAAGGTGACTGAAC+TGG | + | chr5.1:64660807-64660826 | MS.gene29638:CDS | 40.0% | |
| AACATGATGACATGCACACT+AGG | - | chr5.1:64662881-64662900 | None:intergenic | 40.0% | |
| AATTGCAGCCTCTATGCAAT+TGG | - | chr5.1:64663809-64663828 | None:intergenic | 40.0% | |
| ACCTTTGTGTAAAAGTCTGG+TGG | - | chr5.1:64663519-64663538 | None:intergenic | 40.0% | |
| AGAAGAAGAATCATCGGGAA+AGG | + | chr5.1:64662063-64662082 | MS.gene29638:CDS | 40.0% | |
| ATATACTTAGGGTGTACCCT+AGG | + | chr5.1:64662552-64662571 | MS.gene29638:CDS | 40.0% | |
| ATTTCAAGCCACATCTTGGT+TGG | + | chr5.1:64662597-64662616 | MS.gene29638:CDS | 40.0% | |
| CAAGCGATTGGTGAATAATG+TGG | + | chr5.1:64662972-64662991 | MS.gene29638:intron | 40.0% | |
| CGAAAACATCGAAACCAAGT+TGG | - | chr5.1:64662674-64662693 | None:intergenic | 40.0% | |
| CGAGGAGAATTTCACGTTAT+TGG | + | chr5.1:64660930-64660949 | MS.gene29638:CDS | 40.0% | |
| CTCATGGAACAGACATCATT+AGG | + | chr5.1:64662429-64662448 | MS.gene29638:CDS | 40.0% | |
| CTGACCTTTGTGTAAAAGTC+TGG | - | chr5.1:64663522-64663541 | None:intergenic | 40.0% | |
| GAAAAGGCTTCAGAATCTCA+TGG | + | chr5.1:64662413-64662432 | MS.gene29638:CDS | 40.0% | |
| GACTTAAAACGTTCTTTCGG+AGG | - | chr5.1:64661986-64662005 | None:intergenic | 40.0% | |
| GAGCGAAACAACCTTAGAAA+AGG | + | chr5.1:64662397-64662416 | MS.gene29638:CDS | 40.0% | |
| GATGGTTGCATTCAATATGC+AGG | + | chr5.1:64662634-64662653 | MS.gene29638:CDS | 40.0% | |
| GCCAGATTCTACAATTGAAG+TGG | + | chr5.1:64662090-64662109 | MS.gene29638:CDS | 40.0% | |
| GTAAGAGACAAAGATCAAGG+AGG | + | chr5.1:64664458-64664477 | MS.gene29638:CDS | 40.0% | |
| TAACGCTTCCAATTGCATAG+AGG | + | chr5.1:64663798-64663817 | MS.gene29638:intron | 40.0% | |
| TAGTACCTTACAGTGTCCTA+TGG | + | chr5.1:64662485-64662504 | MS.gene29638:intron | 40.0% | |
| TATACTTAGGGTGTACCCTA+GGG | + | chr5.1:64662553-64662572 | MS.gene29638:CDS | 40.0% | |
| TGTCAACCGAGCAATTACAT+CGG | + | chr5.1:64660887-64660906 | MS.gene29638:CDS | 40.0% | |
| TTGACTGGCATAATCCTTGT+AGG | - | chr5.1:64663326-64663345 | None:intergenic | 40.0% | |
| ! | AATGGAAGTGATAGCGATGA+GGG | + | chr5.1:64662227-64662246 | MS.gene29638:CDS | 40.0% |
| ! | ATCTGAAGTAAAGCAAGCTC+TGG | - | chr5.1:64664434-64664453 | None:intergenic | 40.0% |
| ! | CGACTTATAATTTAGGACGG+AGG | + | chr5.1:64663849-64663868 | MS.gene29638:intron | 40.0% |
| ! | CGTTTTACCTCGGTTTTCAA+AGG | - | chr5.1:64661093-64661112 | None:intergenic | 40.0% |
| ! | CTTAAACATTCTGCTGGTTG+AGG | - | chr5.1:64661905-64661924 | None:intergenic | 40.0% |
| ! | GTAGTGACTACGTTTTACCT+CGG | - | chr5.1:64661103-64661122 | None:intergenic | 40.0% |
| ! | TCCACCAGACTTTTACACAA+AGG | + | chr5.1:64663515-64663534 | MS.gene29638:CDS | 40.0% |
| ! | TCGTTTTATCTTGTCGCAGA+TGG | + | chr5.1:64661847-64661866 | MS.gene29638:intron | 40.0% |
| !! | ATTGGAAGCGTTAGCACAAT+TGG | - | chr5.1:64663791-64663810 | None:intergenic | 40.0% |
| !! | CAGGGACATACAAGTTTTGA+AGG | - | chr5.1:64663979-64663998 | None:intergenic | 40.0% |
| !! | CTACTTTTCTTCCTCGATAG+GGG | + | chr5.1:64663186-64663205 | MS.gene29638:intron | 40.0% |
| !! | CTTTCAGCTGTTTTCTGATG+TGG | + | chr5.1:64662850-64662869 | MS.gene29638:intron | 40.0% |
| !! | GCAATTACATCGGTTTCTTG+TGG | + | chr5.1:64660897-64660916 | MS.gene29638:CDS | 40.0% |
| !! | TTTTAAGTCCAACCGGATCA+AGG | + | chr5.1:64661997-64662016 | MS.gene29638:CDS | 40.0% |
| AAAATCTCCTTGAGGTCCTC+AGG | - | chr5.1:64660838-64660857 | None:intergenic | 45.0% | |
| ACAGCTGAAAGATCTGACTC+AGG | - | chr5.1:64662841-64662860 | None:intergenic | 45.0% | |
| ACCACTAAATCGACGCATCA+TGG | + | chr5.1:64664195-64664214 | MS.gene29638:intron | 45.0% | |
| CAGGGAATGTTCAGAGCAAA+TGG | + | chr5.1:64663233-64663252 | MS.gene29638:CDS | 45.0% | |
| CAGTCGCAATGCAATTGCAA+AGG | + | chr5.1:64663953-64663972 | MS.gene29638:intron | 45.0% | |
| CAGTGCTTCCAAAAGACAAG+TGG | + | chr5.1:64663097-64663116 | MS.gene29638:intron | 45.0% | |
| CCACATCTTGGTTGGATGTA+TGG | + | chr5.1:64662605-64662624 | MS.gene29638:CDS | 45.0% | |
| CCAGTTGCAGAGCTAAAACT+TGG | + | chr5.1:64664512-64664531 | MS.gene29638:CDS | 45.0% | |
| CCATACATCCAACCAAGATG+TGG | - | chr5.1:64662608-64662627 | None:intergenic | 45.0% | |
| GCAGTTTGCAACCACAACTA+TGG | - | chr5.1:64664002-64664021 | None:intergenic | 45.0% | |
| GGAATGTTCAGAGCAAATGG+AGG | + | chr5.1:64663236-64663255 | MS.gene29638:CDS | 45.0% | |
| GGACACAATTCCTTCCTTAC+TGG | + | chr5.1:64661394-64661413 | MS.gene29638:CDS | 45.0% | |
| GGAGGAAAAGATGACTTTGC+TGG | + | chr5.1:64664476-64664495 | MS.gene29638:CDS | 45.0% | |
| GTGAACTTAGACGCCTAAGT+TGG | + | chr5.1:64662375-64662394 | MS.gene29638:CDS | 45.0% | |
| TGACATGTATGATCCTCCTC+CGG | - | chr5.1:64660872-64660891 | None:intergenic | 45.0% | |
| TGTTGCAGCGCCTTTATGAT+TGG | - | chr5.1:64661451-64661470 | None:intergenic | 45.0% | |
| TTAGGGAACTGTCACCAACT+TGG | + | chr5.1:64662657-64662676 | MS.gene29638:intron | 45.0% | |
| TTCAGAGCAAATGGAGGATG+TGG | + | chr5.1:64663242-64663261 | MS.gene29638:CDS | 45.0% | |
| TTCTTCCTTGCAATGTCAGC+AGG | - | chr5.1:64664344-64664363 | None:intergenic | 45.0% | |
| TTGCAACCACAACTATGGCA+GGG | - | chr5.1:64663997-64664016 | None:intergenic | 45.0% | |
| TTGGATGTATGGAGCTCAGA+TGG | + | chr5.1:64662616-64662635 | MS.gene29638:CDS | 45.0% | |
| TTTCTTCCTCGATAGGGGTT+AGG | + | chr5.1:64663191-64663210 | MS.gene29638:intron | 45.0% | |
| TTTGCAACCACAACTATGGC+AGG | - | chr5.1:64663998-64664017 | None:intergenic | 45.0% | |
| ! | AGATCACTCTGGTTGATGCA+GGG | + | chr5.1:64663215-64663234 | MS.gene29638:CDS | 45.0% |
| ! | AGGTTGTTTCGCTCCAACTT+AGG | - | chr5.1:64662391-64662410 | None:intergenic | 45.0% |
| ! | CAATGCTCCTTTGAAAACCG+AGG | + | chr5.1:64661083-64661102 | MS.gene29638:CDS | 45.0% |
| ! | GAATGGAAGTGATAGCGATG+AGG | + | chr5.1:64662226-64662245 | MS.gene29638:intron | 45.0% |
| ! | GGCAACTATCATGCTCTAGA+TGG | + | chr5.1:64662025-64662044 | MS.gene29638:CDS | 45.0% |
| ! | TCGCCCTTGATGATATCTTC+CGG | + | chr5.1:64661040-64661059 | MS.gene29638:CDS | 45.0% |
| ! | TGGACAATTGGTTTCCTGTG+TGG | + | chr5.1:64664378-64664397 | MS.gene29638:CDS | 45.0% |
| ! | TTTTATGAGTTTGCCGGAGG+AGG | + | chr5.1:64660856-64660875 | MS.gene29638:CDS | 45.0% |
| !! | ATCATAAAGGCGCTGCAACA+AGG | + | chr5.1:64661451-64661470 | MS.gene29638:CDS | 45.0% |
| !! | CAAGCTCTGGAACAGTCAAA+GGG | - | chr5.1:64664421-64664440 | None:intergenic | 45.0% |
| !! | TCCATGATGCGTCGATTTAG+TGG | - | chr5.1:64664199-64664218 | None:intergenic | 45.0% |
| !!! | CCAAGTTTTAGCTCTGCAAC+TGG | - | chr5.1:64664515-64664534 | None:intergenic | 45.0% |
| AGTTGCCGTTGTCCTTGATC+CGG | - | chr5.1:64662012-64662031 | None:intergenic | 50.0% | |
| ATTTGACACGTGTCGCCCTA+GGG | - | chr5.1:64662571-64662590 | None:intergenic | 50.0% | |
| GCAGCTGAGAAGGATACATC+AGG | + | chr5.1:64660981-64661000 | MS.gene29638:CDS | 50.0% | |
| GTATGCCTGCTGACATTGCA+AGG | + | chr5.1:64664336-64664355 | MS.gene29638:CDS | 50.0% | |
| GTATGTCCCTGCCATAGTTG+TGG | + | chr5.1:64663988-64664007 | MS.gene29638:intron | 50.0% | |
| TCCAACCGGATCAAGGACAA+CGG | + | chr5.1:64662004-64662023 | MS.gene29638:CDS | 50.0% | |
| ! | CAGATCACTCTGGTTGATGC+AGG | + | chr5.1:64663214-64663233 | MS.gene29638:CDS | 50.0% |
| ! | CGGTTTCTTGTGGAGCATCA+AGG | + | chr5.1:64660907-64660926 | MS.gene29638:CDS | 50.0% |
| !! | GCAAGCTCTGGAACAGTCAA+AGG | - | chr5.1:64664422-64664441 | None:intergenic | 50.0% |
| !! | TCGCTTTGGAGGGAGTAGAA+AGG | - | chr5.1:64663832-64663851 | None:intergenic | 50.0% |
| AGGGGTTAGGCAGATCACTC+TGG | + | chr5.1:64663204-64663223 | MS.gene29638:intron | 55.0% | |
| ATCTCCTTGAGGTCCTCAGG+TGG | - | chr5.1:64660835-64660854 | None:intergenic | 55.0% | |
| GATCTGCCTAACCCCTATCG+AGG | - | chr5.1:64663200-64663219 | None:intergenic | 55.0% | |
| GATTTGACACGTGTCGCCCT+AGG | - | chr5.1:64662572-64662591 | None:intergenic | 55.0% | |
| ! | GACTGAACTGGTTCCACCTG+AGG | + | chr5.1:64660819-64660838 | MS.gene29638:CDS | 55.0% |
| ! | TCTTGTGGAGCATCAAGGCG+AGG | + | chr5.1:64660912-64660931 | MS.gene29638:CDS | 55.0% |
| ! | TGATAGCGATGAGGGAGACG+CGG | + | chr5.1:64662235-64662254 | MS.gene29638:CDS | 55.0% |
| GAGGGAGACGCGGGTTCATA+TGG | + | chr5.1:64662245-64662264 | MS.gene29638:CDS | 60.0% | |
| GATAGCGATGAGGGAGACGC+GGG | + | chr5.1:64662236-64662255 | MS.gene29638:CDS | 60.0% | |
| GCCGTTGTCCTTGATCCGGT+TGG | - | chr5.1:64662008-64662027 | None:intergenic | 60.0% | |
| GGTTCCACCTGAGGACCTCA+AGG | + | chr5.1:64660828-64660847 | MS.gene29638:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 64660751 | 64664566 | 64660751 | ID=MS.gene29638 |
| chr5.1 | mRNA | 64660751 | 64664566 | 64660751 | ID=MS.gene29638.t1;Parent=MS.gene29638 |
| chr5.1 | exon | 64660751 | 64661104 | 64660751 | ID=MS.gene29638.t1.exon1;Parent=MS.gene29638.t1 |
| chr5.1 | CDS | 64660751 | 64661104 | 64660751 | ID=cds.MS.gene29638.t1;Parent=MS.gene29638.t1 |
| chr5.1 | exon | 64661346 | 64661542 | 64661346 | ID=MS.gene29638.t1.exon2;Parent=MS.gene29638.t1 |
| chr5.1 | CDS | 64661346 | 64661542 | 64661346 | ID=cds.MS.gene29638.t1;Parent=MS.gene29638.t1 |
| chr5.1 | exon | 64661638 | 64661773 | 64661638 | ID=MS.gene29638.t1.exon3;Parent=MS.gene29638.t1 |
| chr5.1 | CDS | 64661638 | 64661773 | 64661638 | ID=cds.MS.gene29638.t1;Parent=MS.gene29638.t1 |
| chr5.1 | exon | 64661866 | 64662126 | 64661866 | ID=MS.gene29638.t1.exon4;Parent=MS.gene29638.t1 |
| chr5.1 | CDS | 64661866 | 64662126 | 64661866 | ID=cds.MS.gene29638.t1;Parent=MS.gene29638.t1 |
| chr5.1 | exon | 64662227 | 64662450 | 64662227 | ID=MS.gene29638.t1.exon5;Parent=MS.gene29638.t1 |
| chr5.1 | CDS | 64662227 | 64662450 | 64662227 | ID=cds.MS.gene29638.t1;Parent=MS.gene29638.t1 |
| chr5.1 | exon | 64662538 | 64662655 | 64662538 | ID=MS.gene29638.t1.exon6;Parent=MS.gene29638.t1 |
| chr5.1 | CDS | 64662538 | 64662655 | 64662538 | ID=cds.MS.gene29638.t1;Parent=MS.gene29638.t1 |
| chr5.1 | exon | 64663206 | 64663358 | 64663206 | ID=MS.gene29638.t1.exon7;Parent=MS.gene29638.t1 |
| chr5.1 | CDS | 64663206 | 64663358 | 64663206 | ID=cds.MS.gene29638.t1;Parent=MS.gene29638.t1 |
| chr5.1 | exon | 64663450 | 64663536 | 64663450 | ID=MS.gene29638.t1.exon8;Parent=MS.gene29638.t1 |
| chr5.1 | CDS | 64663450 | 64663536 | 64663450 | ID=cds.MS.gene29638.t1;Parent=MS.gene29638.t1 |
| chr5.1 | exon | 64664323 | 64664566 | 64664323 | ID=MS.gene29638.t1.exon9;Parent=MS.gene29638.t1 |
| chr5.1 | CDS | 64664323 | 64664566 | 64664323 | ID=cds.MS.gene29638.t1;Parent=MS.gene29638.t1 |
| Gene Sequence |
| Protein sequence |
