AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene29697

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29697.t1 MTR_5g083340 94.258 418 12 2 1 417 1 407 0.0 810
MS.gene29697.t1 MTR_5g083330 52.208 385 93 8 36 417 3 299 1.74e-110 327
MS.gene29697.t1 MTR_5g083320 56.044 182 36 5 24 205 24 161 1.46e-52 174
MS.gene29697.t1 MTR_0939s0010 54.315 197 85 4 24 218 4 197 1.42e-47 161
MS.gene29697.t1 MTR_2g089170 71.901 121 34 0 24 144 4 124 1.94e-44 153
MS.gene29697.t1 MTR_7g070220 60.741 135 40 3 19 140 6 140 9.95e-43 157
MS.gene29697.t1 MTR_7g092190 64.773 88 31 0 60 147 5 92 4.49e-34 129
MS.gene29697.t1 MTR_1g023170 63.441 93 34 0 52 144 7 99 1.44e-30 119
MS.gene29697.t1 MTR_3g112440 71.264 87 24 1 59 144 12 98 1.25e-28 112
MS.gene29697.t1 MTR_5g082950 66.176 68 23 0 73 140 54 121 9.14e-24 101
MS.gene29697.t1 MTR_2g435590 61.429 70 27 0 73 142 84 153 7.23e-23 97.4
MS.gene29697.t1 MTR_5g062700 61.250 80 31 0 66 145 154 233 8.62e-23 99.4
MS.gene29697.t1 MTR_8g090350 37.931 145 85 2 72 215 100 240 1.57e-22 97.1
MS.gene29697.t1 MTR_4g086165 66.667 63 21 0 83 145 80 142 2.36e-22 94.7
MS.gene29697.t1 MTR_5g009620 39.041 146 73 3 28 170 53 185 6.56e-22 95.9
MS.gene29697.t1 MTR_4g086220 67.213 61 20 0 85 145 96 156 1.16e-21 93.6
MS.gene29697.t1 MTR_3g102100 57.971 69 29 0 75 143 35 103 1.72e-21 91.3
MS.gene29697.t1 MTR_3g074130 60.000 80 30 1 72 149 135 214 2.33e-21 94.7
MS.gene29697.t1 MTR_4g086160 65.574 61 21 0 85 145 96 156 2.88e-21 92.4
MS.gene29697.t1 MTR_4g008860 65.000 60 21 0 82 141 5 64 3.64e-21 90.9
MS.gene29697.t1 MTR_5g016750 55.000 80 34 1 66 143 4 83 6.64e-21 90.1
MS.gene29697.t1 MTR_2g090235 41.791 134 66 3 85 214 218 343 7.04e-21 94.4
MS.gene29697.t1 MTR_7g020980 65.517 58 20 0 85 142 51 108 8.14e-21 89.4
MS.gene29697.t1 MTR_7g021010 65.517 58 20 0 85 142 51 108 8.22e-21 89.4
MS.gene29697.t1 MTR_7g046260 51.220 82 40 0 63 144 39 120 1.02e-20 90.9
MS.gene29697.t1 MTR_4g086190 67.797 59 19 0 85 143 96 154 1.11e-20 90.5
MS.gene29697.t1 MTR_1g087920 57.971 69 29 0 82 150 74 142 1.19e-20 92.0
MS.gene29697.t1 MTR_7g021010 65.517 58 20 0 85 142 12 69 1.31e-20 87.8
MS.gene29697.t1 MTR_2g105380 62.295 61 23 0 82 142 114 174 1.44e-20 92.8
MS.gene29697.t1 MTR_2g101340 49.451 91 42 1 54 144 14 100 1.53e-20 89.7
MS.gene29697.t1 MTR_3g090760 54.321 81 37 0 60 140 88 168 3.18e-20 91.7
MS.gene29697.t1 MTR_8g022820 57.353 68 29 0 75 142 113 180 3.21e-20 92.0
MS.gene29697.t1 MTR_8g022820 57.353 68 29 0 75 142 114 181 3.40e-20 92.0
MS.gene29697.t1 MTR_8g022820 57.353 68 29 0 75 142 114 181 3.40e-20 92.0
MS.gene29697.t1 MTR_6g088405 65.000 60 21 0 85 144 44 103 5.06e-20 88.6
MS.gene29697.t1 MTR_5g012910 61.667 60 23 0 85 144 28 87 8.05e-20 87.0
MS.gene29697.t1 MTR_3g106290 63.333 60 22 0 82 141 5 64 8.27e-20 87.0
MS.gene29697.t1 MTR_8g006815 47.674 86 44 1 83 167 94 179 9.75e-20 87.0
MS.gene29697.t1 MTR_1g019110 62.712 59 22 0 85 143 44 102 1.65e-19 85.9
MS.gene29697.t1 MTR_3g110205 40.179 112 59 2 85 196 43 146 1.79e-19 86.3
MS.gene29697.t1 MTR_4g078710 51.190 84 37 1 81 160 24 107 3.60e-19 85.9
MS.gene29697.t1 MTR_1g090170 61.017 59 23 0 85 143 152 210 4.65e-19 87.8
MS.gene29697.t1 MTR_1g090170 61.017 59 23 0 85 143 239 297 5.83e-19 88.6
MS.gene29697.t1 MTR_1g048610 72.414 58 15 1 85 141 89 146 6.06e-19 85.9
MS.gene29697.t1 MTR_1g014860 35.821 134 65 3 77 189 13 146 9.68e-19 84.7
MS.gene29697.t1 MTR_4g010640 60.606 66 25 1 84 149 6 70 1.21e-18 84.3
MS.gene29697.t1 MTR_8g092460 62.712 59 22 0 84 142 144 202 1.22e-18 86.7
MS.gene29697.t1 MTR_8g102800 61.667 60 23 0 85 144 37 96 1.56e-18 84.7
MS.gene29697.t1 MTR_2g014340 61.667 60 23 0 82 141 16 75 1.58e-18 84.0
MS.gene29697.t1 MTR_4g114570 63.793 58 21 0 84 141 6 63 2.01e-18 84.0
MS.gene29697.t1 MTR_1g070070 60.870 69 24 2 82 149 18 84 2.37e-18 81.6
MS.gene29697.t1 MTR_2g078680 44.340 106 51 2 82 185 28 127 2.47e-18 83.6
MS.gene29697.t1 MTR_8g006410 62.712 59 22 0 85 143 52 110 3.04e-18 83.2
MS.gene29697.t1 MTR_8g013860 59.016 61 25 0 85 145 47 107 3.58e-18 82.8
MS.gene29697.t1 MTR_2g015040 61.290 62 23 1 81 141 59 120 3.95e-18 81.6
MS.gene29697.t1 MTR_3g053690 60.000 60 24 0 82 141 24 83 4.14e-18 83.2
MS.gene29697.t1 MTR_2g014300 59.677 62 25 0 80 141 10 71 4.24e-18 81.6
MS.gene29697.t1 MTR_8g099215 40.351 114 56 2 59 168 89 194 4.54e-18 84.7
MS.gene29697.t1 MTR_8g006840 60.606 66 23 2 85 147 125 190 4.55e-18 82.4
MS.gene29697.t1 MTR_7g117690 60.345 58 23 0 85 142 28 85 4.99e-18 81.6
MS.gene29697.t1 MTR_2g103700 63.793 58 21 0 84 141 6 63 5.92e-18 81.6
MS.gene29697.t1 MTR_1g028560 51.852 81 38 1 82 161 112 192 5.92e-18 85.1
MS.gene29697.t1 MTR_4g100450 72.414 58 15 1 85 141 154 211 6.16e-18 84.3
MS.gene29697.t1 MTR_4g100650 61.667 60 23 0 85 144 74 133 6.39e-18 83.6
MS.gene29697.t1 MTR_4g100380 56.410 78 25 2 65 141 133 202 7.78e-18 83.2
MS.gene29697.t1 MTR_4g100420 65.152 66 21 2 78 141 149 214 1.02e-17 83.6
MS.gene29697.t1 MTR_1g014780 53.731 67 30 1 77 142 29 95 1.07e-17 82.0
MS.gene29697.t1 MTR_7g096750 67.797 59 18 1 84 141 19 77 1.10e-17 79.7
MS.gene29697.t1 MTR_4g088005 60.656 61 23 1 82 141 54 114 1.56e-17 78.6
MS.gene29697.t1 MTR_5g008790 52.857 70 31 1 84 151 17 86 1.68e-17 79.7
MS.gene29697.t1 MTR_1g074230 60.000 75 25 2 69 142 7 77 2.71e-17 78.6
MS.gene29697.t1 MTR_7g096700 62.121 66 24 1 84 148 19 84 2.86e-17 78.6
MS.gene29697.t1 MTR_1g074310 56.164 73 28 2 73 141 6 78 3.43e-17 78.6
MS.gene29697.t1 MTR_5g032820 64.912 57 20 0 84 140 45 101 3.70e-17 82.8
MS.gene29697.t1 MTR_8g027465 53.623 69 30 1 74 142 30 96 4.11e-17 79.3
MS.gene29697.t1 MTR_5g075570 54.930 71 31 1 85 155 124 193 4.44e-17 81.3
MS.gene29697.t1 MTR_4g054360 55.556 72 27 2 85 155 124 191 5.00e-17 80.9
MS.gene29697.t1 MTR_7g081815 59.016 61 24 1 84 143 60 120 5.39e-17 79.7
MS.gene29697.t1 MTR_4g054740 54.054 74 29 2 85 157 97 166 6.08e-17 80.1
MS.gene29697.t1 MTR_7g081805 59.016 61 24 1 84 143 60 120 8.94e-17 79.0
MS.gene29697.t1 MTR_7g085810 51.351 74 36 0 67 140 12 85 9.92e-17 80.1
MS.gene29697.t1 MTR_4g111915 50.000 70 33 1 82 149 50 119 1.08e-16 77.0
MS.gene29697.t1 MTR_2g015050 52.439 82 35 2 61 141 113 191 1.09e-16 80.1
MS.gene29697.t1 MTR_1g014820 52.239 67 31 1 77 142 18 84 1.43e-16 79.7
MS.gene29697.t1 MTR_7g081795 46.429 84 44 1 61 143 36 119 2.02e-16 77.8
MS.gene29697.t1 MTR_8g006825 55.738 61 26 1 84 143 95 155 2.14e-16 77.8
MS.gene29697.t1 MTR_7g084370 63.158 57 21 0 84 140 41 97 3.55e-16 79.0
MS.gene29697.t1 MTR_4g119270 53.333 75 30 1 66 140 39 108 3.78e-16 79.7
MS.gene29697.t1 MTR_1g070035 40.351 114 52 3 68 173 53 158 3.98e-16 77.4
MS.gene29697.t1 MTR_2g019750 48.780 82 37 1 59 140 29 105 4.44e-16 78.6
MS.gene29697.t1 MTR_4g112490 50.000 70 33 1 82 149 50 119 4.73e-16 77.0
MS.gene29697.t1 MTR_1g014800 53.448 58 27 0 85 142 31 88 5.12e-16 77.0
MS.gene29697.t1 MTR_1g101600 62.069 58 22 0 85 142 41 98 6.57e-16 76.3
MS.gene29697.t1 MTR_7g096810 50.000 92 43 3 72 162 1 90 8.81e-16 73.9
MS.gene29697.t1 MTR_6g466130 40.404 99 54 1 44 142 30 123 1.06e-15 76.3
MS.gene29697.t1 MTR_8g069360 49.296 71 34 1 84 152 43 113 1.17e-15 79.0
MS.gene29697.t1 MTR_1g079630 51.316 76 21 1 65 140 4 63 1.18e-15 74.3
MS.gene29697.t1 MTR_1g070045 43.119 109 45 4 74 173 47 147 1.41e-15 74.7
MS.gene29697.t1 MTR_6g465850 34.559 136 83 2 85 214 63 198 1.96e-15 76.6
MS.gene29697.t1 MTR_1g090290 63.793 58 20 1 85 141 113 170 2.03e-15 74.7
MS.gene29697.t1 MTR_1g070020 45.161 93 42 2 82 173 67 151 2.11e-15 75.1
MS.gene29697.t1 MTR_5g085100 51.429 70 34 0 72 141 33 102 2.18e-15 76.6
MS.gene29697.t1 MTR_6g088425 65.000 60 21 0 85 144 49 108 2.31e-15 75.5
MS.gene29697.t1 MTR_4g054860 62.069 58 21 1 86 142 132 189 2.57e-15 76.3
MS.gene29697.t1 MTR_1g069985 39.640 111 53 3 69 173 54 156 2.78e-15 74.7
MS.gene29697.t1 MTR_6g465510 60.345 58 23 0 85 142 33 90 2.90e-15 74.7
MS.gene29697.t1 MTR_6g465460 39.837 123 63 2 63 179 37 154 3.00e-15 75.9
MS.gene29697.t1 MTR_5g085070 46.154 78 42 0 64 141 30 107 3.59e-15 75.9
MS.gene29697.t1 MTR_6g465530 60.345 58 23 0 85 142 33 90 3.81e-15 73.9
MS.gene29697.t1 MTR_6g465430 43.269 104 48 2 63 160 37 135 4.08e-15 75.1
MS.gene29697.t1 MTR_2g043030 34.862 109 66 1 85 188 19 127 4.20e-15 73.9
MS.gene29697.t1 MTR_2g438180 59.677 62 24 1 82 142 11 72 5.43e-15 72.0
MS.gene29697.t1 MTR_6g465690 58.621 58 24 0 85 142 63 120 6.00e-15 74.7
MS.gene29697.t1 MTR_2g085015 58.333 60 23 2 85 142 47 106 6.20e-15 74.3
MS.gene29697.t1 MTR_1g070015 46.591 88 38 2 85 171 84 163 6.26e-15 73.9
MS.gene29697.t1 MTR_1g070000 44.086 93 43 2 80 171 79 163 6.35e-15 73.9
MS.gene29697.t1 MTR_3g105510 51.613 62 30 0 81 142 33 94 7.00e-15 74.3
MS.gene29697.t1 MTR_4g035430 41.667 84 42 1 63 146 17 93 8.77e-15 73.6
MS.gene29697.t1 MTR_1g006660 60.606 66 26 0 80 145 42 107 8.89e-15 74.3
MS.gene29697.t1 MTR_6g465450 47.500 80 37 1 63 142 37 111 9.73e-15 73.9
MS.gene29697.t1 MTR_6g465420 48.780 82 36 1 85 160 54 135 1.46e-14 73.9
MS.gene29697.t1 MTR_6g466000 58.621 58 24 0 85 142 57 114 1.57e-14 72.8
MS.gene29697.t1 MTR_2g016730 44.828 87 33 1 54 140 7 78 1.67e-14 74.7
MS.gene29697.t1 MTR_4g082345 35.246 122 60 2 19 140 1 103 1.87e-14 74.3
MS.gene29697.t1 MTR_6g466020 41.414 99 48 1 58 156 26 114 2.08e-14 71.6
MS.gene29697.t1 MTR_2g043050 51.724 58 28 0 85 142 19 76 2.27e-14 72.4
MS.gene29697.t1 MTR_3g017420 52.000 50 24 0 93 142 3 52 2.30e-14 68.2
MS.gene29697.t1 MTR_8g032610 57.895 57 24 0 84 140 26 82 2.87e-14 73.6
MS.gene29697.t1 MTR_5g008470 45.000 80 39 1 71 145 56 135 4.14e-14 70.9
MS.gene29697.t1 MTR_1g074250 59.016 61 23 1 84 142 18 78 4.56e-14 69.3
MS.gene29697.t1 MTR_7g028925 51.515 66 28 2 78 142 21 83 4.87e-14 67.8
MS.gene29697.t1 MTR_6g029180 44.048 84 45 1 57 140 7 88 5.23e-14 72.8
MS.gene29697.t1 MTR_1g012470 62.712 59 22 0 83 141 5 63 7.05e-14 70.5
MS.gene29697.t1 MTR_5g008590 37.500 128 57 2 85 189 11 138 8.31e-14 70.1
MS.gene29697.t1 MTR_5g008540 45.455 77 40 1 78 152 17 93 9.67e-14 67.4
MS.gene29697.t1 MTR_8g085960 41.860 86 43 1 55 140 2 80 9.86e-14 70.9
MS.gene29697.t1 MTR_6g012970 50.769 65 32 0 76 140 29 93 2.38e-13 71.6
MS.gene29697.t1 MTR_2g043020 37.500 104 56 2 85 179 19 122 3.25e-13 68.6
MS.gene29697.t1 MTR_2g043040 50.000 58 29 0 85 142 19 76 4.55e-13 68.9
MS.gene29697.t1 MTR_4g102670 56.897 58 24 1 85 142 15 71 4.59e-13 67.4
MS.gene29697.t1 MTR_3g095190 61.290 62 24 0 81 142 166 227 5.22e-13 70.1
MS.gene29697.t1 MTR_3g098580 63.793 58 21 0 85 142 76 133 9.23e-13 68.6
MS.gene29697.t1 MTR_3g107380 63.793 58 21 0 84 141 7 64 1.06e-12 67.4
MS.gene29697.t1 MTR_5g058470 45.238 84 45 1 59 141 70 153 1.12e-12 68.6
MS.gene29697.t1 MTR_8g023680 54.386 57 17 1 84 140 115 162 1.19e-12 69.3
MS.gene29697.t1 MTR_7g011630 51.613 62 30 0 79 140 36 97 1.35e-12 69.7
MS.gene29697.t1 MTR_3g062440 48.235 85 41 3 68 150 99 182 3.03e-12 67.0
MS.gene29697.t1 MTR_1g040430 45.783 83 38 2 93 168 119 201 3.58e-12 65.5
MS.gene29697.t1 MTR_3g105480 51.786 56 27 0 87 142 33 88 3.58e-12 66.2
MS.gene29697.t1 MTR_1g069960 61.667 60 22 1 84 142 26 85 6.43e-12 63.5
MS.gene29697.t1 MTR_1g097190 54.386 57 25 1 85 140 23 79 6.58e-12 63.2
MS.gene29697.t1 MTR_1g043350 43.636 110 55 3 47 155 46 149 8.72e-12 64.7
MS.gene29697.t1 MTR_8g023700 44.286 70 30 1 85 154 117 177 1.46e-11 65.9
MS.gene29697.t1 MTR_1g074370 56.757 74 25 2 82 148 70 143 2.29e-11 63.5
MS.gene29697.t1 MTR_5g009410 63.934 61 22 0 85 145 117 177 2.34e-11 65.1
MS.gene29697.t1 MTR_5g008550 57.627 59 25 0 85 143 21 79 2.54e-11 62.8
MS.gene29697.t1 MTR_3g072610 50.000 76 31 2 73 141 8 83 3.22e-11 63.2
MS.gene29697.t1 MTR_6g033255 64.407 59 21 0 85 143 20 78 3.81e-11 62.8
MS.gene29697.t1 MTR_5g010930 51.562 64 25 1 85 142 49 112 6.17e-11 62.4
MS.gene29697.t1 MTR_5g010940 51.562 64 25 1 85 142 54 117 7.61e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29697.t1 AT2G40340 38.235 374 147 12 19 385 6 302 2.00e-59 197
MS.gene29697.t1 AT2G40340 38.441 372 145 12 21 385 15 309 2.60e-59 197
MS.gene29697.t1 AT2G40340 55.114 176 56 5 19 190 6 162 1.56e-51 175
MS.gene29697.t1 AT5G05410 57.609 184 47 4 5 188 3 155 4.16e-46 161
MS.gene29697.t1 AT5G05410 57.609 184 47 4 5 188 3 155 5.52e-46 162
MS.gene29697.t1 AT2G40350 64.800 125 36 3 21 141 10 130 1.07e-45 155
MS.gene29697.t1 AT2G40350 63.780 127 38 3 19 141 1 123 1.60e-45 155
MS.gene29697.t1 AT2G40340 34.385 317 132 7 72 385 1 244 3.64e-42 150
MS.gene29697.t1 AT2G40340 34.385 317 132 7 72 385 1 244 3.64e-42 150
MS.gene29697.t1 AT2G40340 34.385 317 132 7 72 385 1 244 3.64e-42 150
MS.gene29697.t1 AT3G11020 55.747 174 47 3 18 189 10 155 4.13e-39 143
MS.gene29697.t1 AT1G75490 57.658 111 42 1 59 169 16 121 3.15e-37 135
MS.gene29697.t1 AT5G18450 67.470 83 27 0 58 140 7 89 5.55e-33 126
MS.gene29697.t1 AT2G38340 59.483 116 30 3 35 142 29 135 7.02e-30 116
MS.gene29697.t1 AT3G57600 61.176 85 33 0 59 143 2 86 1.46e-28 113
MS.gene29697.t1 AT5G65130 59.770 87 34 1 85 170 113 199 1.68e-25 105
MS.gene29697.t1 AT5G65130 59.770 87 34 1 85 170 111 197 1.71e-25 105
MS.gene29697.t1 AT3G16770 58.824 68 28 0 76 143 70 137 1.32e-22 96.7
MS.gene29697.t1 AT4G06746 61.905 63 24 0 80 142 31 93 3.49e-22 92.4
MS.gene29697.t1 AT2G47520 41.129 124 62 2 75 198 40 152 3.85e-22 93.2
MS.gene29697.t1 AT1G78080 64.286 70 25 0 74 143 141 210 5.05e-22 96.7
MS.gene29697.t1 AT1G22190 62.338 77 28 1 68 143 65 141 7.78e-22 94.7
MS.gene29697.t1 AT2G22200 65.079 63 22 0 81 143 67 129 1.34e-21 94.0
MS.gene29697.t1 AT1G46768 67.797 59 19 0 85 143 31 89 1.38e-21 90.9
MS.gene29697.t1 AT1G46768 67.797 59 19 0 85 143 31 89 1.38e-21 90.9
MS.gene29697.t1 AT1G46768 67.797 59 19 0 85 143 31 89 1.41e-21 90.5
MS.gene29697.t1 AT2G33710 65.574 61 21 0 82 142 67 127 1.72e-21 92.8
MS.gene29697.t1 AT2G33710 65.574 61 21 0 82 142 67 127 2.07e-21 92.8
MS.gene29697.t1 AT1G36060 60.494 81 28 1 67 143 121 201 2.91e-21 94.0
MS.gene29697.t1 AT5G67190 47.826 92 44 1 77 168 13 100 3.86e-21 90.9
MS.gene29697.t1 AT4G11140 44.340 106 49 2 83 178 85 190 6.66e-21 92.4
MS.gene29697.t1 AT5G13330 62.500 64 24 0 79 142 33 96 7.29e-21 90.9
MS.gene29697.t1 AT4G39780 69.492 59 18 0 85 143 93 151 7.81e-21 92.0
MS.gene29697.t1 AT2G35700 38.889 144 76 3 85 216 45 188 9.57e-21 89.7
MS.gene29697.t1 AT4G28140 46.226 106 49 1 85 190 143 240 1.48e-20 91.7
MS.gene29697.t1 AT5G25190 63.333 60 22 0 82 141 5 64 2.35e-20 88.6
MS.gene29697.t1 AT2G20880 62.121 66 25 0 78 143 180 245 2.88e-20 91.7
MS.gene29697.t1 AT4G36900 62.712 59 22 0 85 143 30 88 3.07e-20 88.6
MS.gene29697.t1 AT4G32800 60.000 65 26 0 80 144 14 78 4.15e-20 89.0
MS.gene29697.t1 AT2G25820 61.290 62 24 0 85 146 26 87 4.60e-20 89.0
MS.gene29697.t1 AT4G13620 66.102 59 20 0 85 143 232 290 5.43e-20 91.7
MS.gene29697.t1 AT2G23340 62.712 59 22 0 85 143 28 86 6.03e-20 87.0
MS.gene29697.t1 AT4G16750 49.398 83 42 0 62 144 17 99 1.27e-19 86.3
MS.gene29697.t1 AT1G72360 52.941 68 32 0 77 144 17 84 1.27e-19 87.0
MS.gene29697.t1 AT5G61890 65.517 58 20 0 85 142 90 147 1.44e-19 87.8
MS.gene29697.t1 AT1G71450 37.791 172 86 5 67 231 10 167 1.75e-19 85.9
MS.gene29697.t1 AT1G72360 52.941 68 32 0 77 144 66 133 1.85e-19 87.8
MS.gene29697.t1 AT1G72360 52.941 68 32 0 77 144 68 135 1.97e-19 87.8
MS.gene29697.t1 AT3G50260 58.065 62 26 0 82 143 18 79 1.99e-19 85.1
MS.gene29697.t1 AT5G11590 49.412 85 41 1 61 145 29 111 3.05e-19 86.7
MS.gene29697.t1 AT5G51990 51.648 91 38 1 85 169 54 144 3.64e-19 86.3
MS.gene29697.t1 AT4G25470 53.659 82 32 1 85 160 51 132 4.72e-19 85.9
MS.gene29697.t1 AT4G27950 61.667 60 23 0 81 140 114 173 5.13e-19 87.8
MS.gene29697.t1 AT3G60490 63.333 60 22 0 85 144 71 130 6.10e-19 86.3
MS.gene29697.t1 AT1G15360 65.517 58 20 0 84 141 6 63 8.39e-19 84.7
MS.gene29697.t1 AT1G15360 65.517 58 20 0 84 141 6 63 8.39e-19 84.7
MS.gene29697.t1 AT3G15210 46.154 91 46 1 82 169 22 112 1.02e-18 85.1
MS.gene29697.t1 AT5G25810 61.667 60 23 0 85 144 36 95 1.13e-18 84.7
MS.gene29697.t1 AT1G03800 42.727 110 57 1 43 146 5 114 1.39e-18 85.1
MS.gene29697.t1 AT2G44940 61.667 60 23 0 85 144 100 159 1.42e-18 85.9
MS.gene29697.t1 AT2G44840 38.739 111 65 2 36 143 41 151 1.61e-18 84.3
MS.gene29697.t1 AT3G16280 60.000 60 24 0 85 144 61 120 1.78e-18 84.7
MS.gene29697.t1 AT3G16280 60.000 60 24 0 85 144 79 138 2.24e-18 84.7
MS.gene29697.t1 AT2G40220 67.647 68 22 0 73 140 43 110 2.76e-18 85.9
MS.gene29697.t1 AT4G23750 62.712 59 22 0 82 140 119 177 3.23e-18 85.9
MS.gene29697.t1 AT4G23750 62.712 59 22 0 82 140 119 177 3.23e-18 85.9
MS.gene29697.t1 AT5G21960 61.017 59 23 0 84 142 6 64 5.43e-18 82.8
MS.gene29697.t1 AT5G25390 63.333 60 22 0 84 143 6 65 5.56e-18 82.0
MS.gene29697.t1 AT1G21910 50.704 71 35 0 85 155 50 120 6.32e-18 82.8
MS.gene29697.t1 AT4G25490 65.517 58 20 0 85 142 48 105 6.34e-18 82.4
MS.gene29697.t1 AT1G22985 51.163 86 36 3 81 161 71 155 6.63e-18 80.9
MS.gene29697.t1 AT3G20310 57.143 70 29 1 82 150 24 93 7.46e-18 82.8
MS.gene29697.t1 AT5G53290 63.158 57 21 0 84 140 124 180 7.79e-18 84.7
MS.gene29697.t1 AT5G47220 67.241 58 18 1 85 141 117 174 8.00e-18 82.8
MS.gene29697.t1 AT3G61630 63.793 58 21 0 83 140 103 160 8.95e-18 84.0
MS.gene29697.t1 AT1G71130 62.121 66 20 1 80 140 74 139 9.72e-18 80.5
MS.gene29697.t1 AT3G23240 63.492 63 22 1 79 140 76 138 1.07e-17 82.0
MS.gene29697.t1 AT1G22810 41.176 102 58 1 81 180 10 111 1.16e-17 79.7
MS.gene29697.t1 AT5G47230 65.672 67 20 2 78 141 147 213 1.73e-17 82.8
MS.gene29697.t1 AT4G25480 63.793 58 21 0 85 142 51 108 1.78e-17 81.3
MS.gene29697.t1 AT4G17500 67.241 58 18 1 85 141 148 205 3.27e-17 81.6
MS.gene29697.t1 AT3G23230 57.746 71 24 2 84 148 19 89 3.54e-17 78.2
MS.gene29697.t1 AT2G46310 43.519 108 59 1 33 140 49 154 3.58e-17 82.0
MS.gene29697.t1 AT1G50640 58.333 60 25 0 82 141 25 84 4.01e-17 80.5
MS.gene29697.t1 AT5G51190 59.375 64 25 1 79 141 66 129 4.10e-17 80.5
MS.gene29697.t1 AT1G28360 60.000 60 24 0 82 141 9 68 7.13e-17 79.0
MS.gene29697.t1 AT5G44210 47.619 84 38 1 64 141 6 89 8.05e-17 79.0
MS.gene29697.t1 AT1G01250 50.633 79 32 2 69 142 26 102 8.29e-17 78.6
MS.gene29697.t1 AT5G43410 57.143 70 29 1 73 141 3 72 9.33e-17 77.0
MS.gene29697.t1 AT1G24590 64.912 57 20 0 84 140 57 113 1.27e-16 80.5
MS.gene29697.t1 AT1G28160 62.712 59 22 0 82 140 36 94 1.61e-16 79.3
MS.gene29697.t1 AT5G13910 61.404 57 22 0 84 140 19 75 1.92e-16 78.2
MS.gene29697.t1 AT1G19210 48.529 68 35 0 75 142 2 69 2.07e-16 77.4
MS.gene29697.t1 AT5G18560 52.113 71 34 0 70 140 40 110 2.80e-16 80.1
MS.gene29697.t1 AT1G12980 56.923 65 28 0 76 140 48 112 2.96e-16 79.7
MS.gene29697.t1 AT2G36450 61.017 59 22 1 85 142 15 73 3.77e-16 76.6
MS.gene29697.t1 AT2G31230 55.263 76 29 2 80 154 81 152 4.35e-16 77.8
MS.gene29697.t1 AT5G25390 61.667 60 20 1 84 143 6 62 7.05e-16 75.9
MS.gene29697.t1 AT1G77200 62.903 62 23 0 85 146 43 104 9.79e-16 77.0
MS.gene29697.t1 AT1G12890 54.412 68 31 0 73 140 9 76 9.85e-16 76.3
MS.gene29697.t1 AT1G71520 43.421 76 39 1 72 143 1 76 1.04e-15 74.3
MS.gene29697.t1 AT1G53910 36.527 167 94 5 57 212 90 255 2.29e-15 77.4
MS.gene29697.t1 AT1G53910 36.527 167 94 5 57 212 90 255 2.29e-15 77.4
MS.gene29697.t1 AT1G53910 37.324 142 84 3 75 212 113 253 2.32e-15 77.4
MS.gene29697.t1 AT5G61600 62.069 58 21 1 85 141 88 145 4.78e-15 74.7
MS.gene29697.t1 AT4G31060 35.821 134 71 5 75 193 16 149 5.00e-15 73.6
MS.gene29697.t1 AT1G28370 56.897 58 25 0 84 141 19 76 5.01e-15 73.2
MS.gene29697.t1 AT4G17490 63.793 58 20 1 85 141 137 194 5.76e-15 75.5
MS.gene29697.t1 AT1G28370 56.897 58 25 0 84 141 57 114 6.84e-15 73.6
MS.gene29697.t1 AT1G74930 44.737 76 40 1 69 142 3 78 7.62e-15 73.2
MS.gene29697.t1 AT5G07580 60.345 58 22 1 85 141 110 167 1.25e-14 72.8
MS.gene29697.t1 AT3G14230 48.515 101 50 1 75 175 113 211 1.27e-14 75.5
MS.gene29697.t1 AT3G14230 48.515 101 50 1 75 175 114 212 1.29e-14 75.5
MS.gene29697.t1 AT3G14230 48.515 101 50 1 75 175 118 216 1.40e-14 75.1
MS.gene29697.t1 AT1G77640 54.545 66 30 0 79 144 37 102 2.23e-14 72.8
MS.gene29697.t1 AT4G34410 63.492 63 22 1 85 147 136 197 2.51e-14 73.2
MS.gene29697.t1 AT1G43160 55.263 76 31 1 84 156 60 135 2.52e-14 71.6
MS.gene29697.t1 AT5G07310 65.517 58 20 0 85 142 92 149 8.54e-14 71.6
MS.gene29697.t1 AT5G19790 50.000 70 35 0 73 142 10 79 9.29e-14 71.2
MS.gene29697.t1 AT4G18450 61.017 59 21 2 84 140 109 167 1.60e-13 71.2
MS.gene29697.t1 AT5G50080 62.295 61 23 0 82 142 83 143 1.96e-13 69.7
MS.gene29697.t1 AT5G50080 62.295 61 23 0 82 142 74 134 2.16e-13 69.7
MS.gene29697.t1 AT1G68550 34.286 140 74 4 70 201 98 227 4.72e-13 70.1
MS.gene29697.t1 AT1G68550 34.286 140 74 4 70 201 98 227 4.72e-13 70.1
MS.gene29697.t1 AT5G11190 60.000 60 24 0 84 143 6 65 6.74e-13 67.4
MS.gene29697.t1 AT1G12610 55.172 58 26 0 85 142 30 87 1.50e-12 67.0
MS.gene29697.t1 AT1G63030 56.897 58 25 0 85 142 30 87 2.66e-12 65.5
MS.gene29697.t1 AT1G63030 56.897 58 25 0 85 142 30 87 2.66e-12 65.5
MS.gene29697.t1 AT1G64380 45.536 112 50 2 85 186 136 246 3.09e-12 67.8
MS.gene29697.t1 AT1G44830 58.065 62 25 1 84 144 34 95 5.35e-12 65.5
MS.gene29697.t1 AT1G33760 55.738 61 27 0 85 145 20 80 5.35e-12 64.7
MS.gene29697.t1 AT5G64750 56.863 51 22 0 92 142 192 242 1.06e-11 66.6
MS.gene29697.t1 AT1G04370 60.656 61 23 1 82 141 17 77 1.16e-11 62.4
MS.gene29697.t1 AT3G23220 62.903 62 22 1 81 141 10 71 1.57e-11 62.4

Find 99 sgRNAs with CRISPR-Local

Find 116 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGAGGTGGATGAGCTTT+TGG 0.152065 5.3:-67520434 MS.gene29697:CDS
GGGAGAAGATACACCGTTTC+TGG 0.163018 5.3:-67520191 MS.gene29697:CDS
CAAAGTCTACTTCCTCTATT+TGG 0.187638 5.3:+67521057 None:intergenic
AGATACACCGTTTCTGGATT+TGG 0.236598 5.3:-67520185 MS.gene29697:CDS
GGAAATGGGTTGCTGAAATT+AGG 0.238482 5.3:-67521083 MS.gene29697:CDS
GTGATGCAAAGTTTGGATTT+TGG 0.248812 5.3:-67520376 MS.gene29697:CDS
AATAATCCGATTGATGATTC+TGG 0.273054 5.3:-67520400 MS.gene29697:CDS
ATCGGATTATAGTTGTATTC+AGG 0.285106 5.3:-67520935 MS.gene29697:CDS
GTTGGGGAGTTTGCCTGATA+TGG 0.287273 5.3:-67520266 MS.gene29697:CDS
ACTGTTGATGTTTGTTATAA+AGG 0.292146 5.3:-67520757 MS.gene29697:CDS
ACTTAACTTTCCTGATATAT+CGG 0.317233 5.3:-67520953 MS.gene29697:CDS
ACAGCATCAGGTGTCGATTA+TGG 0.318832 5.3:-67520238 MS.gene29697:CDS
ACCGGAGGATTACTTTCTTC+AGG 0.326359 5.3:+67520340 None:intergenic
TTCTGGGGTGATGCAAAGTT+TGG 0.360342 5.3:-67520383 MS.gene29697:CDS
CAACTATAATCCGATATATC+AGG 0.375560 5.3:+67520943 None:intergenic
TTGTGCTATTGAGGATGTTA+AGG 0.380422 5.3:-67520812 MS.gene29697:CDS
GATGCTGTGTGTTCCATATC+AGG 0.387553 5.3:+67520253 None:intergenic
TAGCTGAGACTCTAGCAAAA+TGG 0.390927 5.3:-67521260 MS.gene29697:CDS
GAAATGGGTTGCTGAAATTA+GGG 0.399012 5.3:-67521082 MS.gene29697:CDS
TTCCTTCTGAATTTACATCT+TGG 0.401082 5.3:+67520647 None:intergenic
TTAGCCGGTGCTTTACGCTT+TGG 0.401156 5.3:+67521192 None:intergenic
AATCCAGATGCTAAGCTGTT+GGG 0.408233 5.3:-67520283 MS.gene29697:CDS
TCTTGCTTCATTCTACTAGT+TGG 0.417780 5.3:+67520718 None:intergenic
AGCTGCTAGCTGTTGTTCTT+CGG 0.428526 5.3:-67520887 MS.gene29697:CDS
TCACGTGGATGATTTCTTTG+AGG 0.433868 5.3:-67520449 MS.gene29697:CDS
GAGGTGTTAGACAGAGGACT+TGG 0.449143 5.3:-67521107 MS.gene29697:CDS
CTCCCCAACAGCTTAGCATC+TGG 0.449594 5.3:+67520280 None:intergenic
ATAATCCGATTGATGATTCT+GGG 0.453289 5.3:-67520399 MS.gene29697:CDS
TTCTGAGGTTTGTGCTATTG+AGG 0.453311 5.3:-67520821 MS.gene29697:CDS
ACAGTGTTGTTCATATGAAC+AGG 0.454495 5.3:+67520775 None:intergenic
TAATGCTTCTCTTGCGCCGT+TGG 0.459289 5.3:-67521334 MS.gene29697:CDS
AAAACTAGGAGTAGAGGAAA+AGG 0.467058 5.3:-67521294 MS.gene29697:CDS
GGATTACCTCTGAACTTCAA+TGG 0.471375 5.3:-67520217 MS.gene29697:CDS
CAAATAGAGGAAGTAGACTT+TGG 0.472515 5.3:-67521056 MS.gene29697:CDS
GTTTGAGTTCCCGATGTTTG+TGG 0.475222 5.3:+67520607 None:intergenic
ACCTGAAGAAAGTAATCCTC+CGG 0.476546 5.3:-67520341 MS.gene29697:CDS
GATATGGAACACACAGCATC+AGG 0.483535 5.3:-67520250 MS.gene29697:CDS
TACCTCTGAACTTCAATGGC+GGG 0.490863 5.3:-67520213 MS.gene29697:CDS
AAGCGTAAAGCACCGGCTAA+AGG 0.491219 5.3:-67521189 MS.gene29697:CDS
AAGAGGAAAACTAGGAGTAG+AGG 0.491742 5.3:-67521300 MS.gene29697:CDS
CCAAGGTCTATGATATCATC+AGG 0.500265 5.3:+67520682 None:intergenic
AGAGGAAGTAGACTTTGGTT+AGG 0.502051 5.3:-67521051 MS.gene29697:CDS
AAAGGGTGTATGAAAGGTAA+AGG 0.503890 5.3:-67521159 MS.gene29697:CDS
CCGGCTAAAGGTTCGAAGAA+AGG 0.504270 5.3:-67521177 MS.gene29697:CDS
CGTGGATGATTTCTTTGAGG+TGG 0.506641 5.3:-67520446 MS.gene29697:CDS
CGGCTAAAGGTTCGAAGAAA+GGG 0.508494 5.3:-67521176 MS.gene29697:CDS
TAATCCAGATGCTAAGCTGT+TGG 0.515884 5.3:-67520284 MS.gene29697:CDS
TTCATATGAACAGGTATCCT+AGG 0.516921 5.3:+67520784 None:intergenic
CTTTATGCTGGTAAAGATGA+TGG 0.517668 5.3:-67521219 MS.gene29697:CDS
AAGCTTGAAGTAGTCCCAAC+CGG 0.521321 5.3:+67520322 None:intergenic
ATATCATCAGGCTCATCCAT+TGG 0.528488 5.3:+67520694 None:intergenic
GAAATTAGGGAACCAAATAG+AGG 0.528600 5.3:-67521069 MS.gene29697:CDS
ACCTCTGAACTTCAATGGCG+GGG 0.532633 5.3:-67520212 MS.gene29697:CDS
AGCACAGAATCGTGTGTTTG+TGG 0.534037 5.3:+67520574 None:intergenic
TACAATGAGAAGCTTTATGC+TGG 0.534260 5.3:-67521231 MS.gene29697:CDS
CCTTTCTTCGAACCTTTAGC+CGG 0.540256 5.3:+67521177 None:intergenic
TTAAAACATTGATCATAAGC+AGG 0.541137 5.3:+67521354 None:intergenic
AAGAAAGTAATCCTCCGGTT+GGG 0.541391 5.3:-67520336 MS.gene29697:CDS
CACGATTCAAGAGGAATGCA+AGG 0.542286 5.3:-67520148 MS.gene29697:CDS
GAAGAAAGTAATCCTCCGGT+TGG 0.547633 5.3:-67520337 MS.gene29697:CDS
TCGCGCAGAAGGACCATACA+TGG 0.549570 5.3:+67520975 None:intergenic
ATCACCCCAGAATCATCAAT+CGG 0.549835 5.3:+67520394 None:intergenic
AGGTGTTAGACAGAGGACTT+GGG 0.550286 5.3:-67521106 MS.gene29697:CDS
TAGAATGAAGCAAGAGCCAA+TGG 0.552297 5.3:-67520710 MS.gene29697:CDS
CTAACACAACCACAAACATC+GGG 0.552366 5.3:-67520616 MS.gene29697:CDS
TCATAATCCAAATCCAGAAA+CGG 0.553925 5.3:+67520178 None:intergenic
ATCCAGATGCTAAGCTGTTG+GGG 0.555129 5.3:-67520282 MS.gene29697:CDS
ACAAACACACGATTCTGTGC+TGG 0.560622 5.3:-67520572 MS.gene29697:CDS
ATTCAAGAGGAATGCAAGGA+AGG 0.562142 5.3:-67520144 MS.gene29697:CDS
CGATTCTGTGCTGGTTGGAG+AGG 0.565617 5.3:-67520563 MS.gene29697:CDS
ATCCAAGATGTAAATTCAGA+AGG 0.567305 5.3:-67520649 MS.gene29697:CDS
TCTAACACAACCACAAACAT+CGG 0.567821 5.3:-67520617 MS.gene29697:CDS
TCGAAGAAAGGGTGTATGAA+AGG 0.574846 5.3:-67521165 MS.gene29697:CDS
GGAAAGTTAAGTCGCGCAGA+AGG 0.575063 5.3:+67520964 None:intergenic
AACTGTGTCTAGTCATTCTG+AGG 0.586532 5.3:-67520836 MS.gene29697:CDS
TGAGACTCTAGCAAAATGGA+AGG 0.591128 5.3:-67521256 MS.gene29697:CDS
GATCTAAATCACGATTCAAG+AGG 0.592296 5.3:-67520157 MS.gene29697:CDS
GTTGTTGTCTCAGATGTCGC+AGG 0.599912 5.3:+67520856 None:intergenic
TATGCTGCTAGAGCCATGTA+TGG 0.603738 5.3:-67520988 MS.gene29697:CDS
TAAACCAAAGCGTAAAGCAC+CGG 0.609257 5.3:-67521196 MS.gene29697:CDS
TAAAGGAGGACCTCAAAACT+CGG 0.611825 5.3:-67521142 MS.gene29697:CDS
AGTGGATGAGTTCTTTCACG+TGG 0.615259 5.3:-67520464 MS.gene29697:CDS
CCTCTGAACTTCAATGGCGG+GGG 0.616934 5.3:-67520211 MS.gene29697:CDS
ACACACGATTCTGTGCTGGT+TGG 0.622925 5.3:-67520568 MS.gene29697:CDS
GGGTGTGTGTAATGACCAGA+TGG 0.627240 5.3:-67520542 MS.gene29697:CDS
GATTCTGTGCTGGTTGGAGA+GGG 0.638245 5.3:-67520562 MS.gene29697:CDS
AGGATGTTAAGGAGATACCT+AGG 0.639022 5.3:-67520801 MS.gene29697:CDS
GGTGTTAGACAGAGGACTTG+GGG 0.639869 5.3:-67521105 MS.gene29697:CDS
GATGATATCATAGACCTTGG+TGG 0.641479 5.3:-67520679 MS.gene29697:CDS
CCTGATGATATCATAGACCT+TGG 0.647685 5.3:-67520682 MS.gene29697:CDS
TTACCTCTGAACTTCAATGG+CGG 0.652917 5.3:-67520214 MS.gene29697:CDS
AACTCGGAGAATAAGTATCG+AGG 0.657332 5.3:-67521126 MS.gene29697:CDS
TAATCCGATTGATGATTCTG+GGG 0.667524 5.3:-67520398 MS.gene29697:CDS
GGGTGTATGAAAGGTAAAGG+AGG 0.671358 5.3:-67521156 MS.gene29697:CDS
CTTGGATTTCACCACCACCA+AGG 0.674758 5.3:+67520665 None:intergenic
GATATCATAGACCTTGGTGG+TGG 0.689732 5.3:-67520676 MS.gene29697:CDS
GTGTTAGACAGAGGACTTGG+GGG 0.694177 5.3:-67521104 MS.gene29697:CDS
CTTGAAGTAGTCCCAACCGG+AGG 0.700460 5.3:+67520325 None:intergenic
AGTATCGAGGTGTTAGACAG+AGG 0.700935 5.3:-67521113 MS.gene29697:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! ACTTAACTTTCCTGATATAT+CGG - chr5.3:67520542-67520561 MS.gene29697:CDS 25.0%
! TTAAAACATTGATCATAAGC+AGG + chr5.3:67520144-67520163 None:intergenic 25.0%
!! TTCAAGCTTCTTTTATGAAT+TGG - chr5.3:67521187-67521206 MS.gene29697:CDS 25.0%
!!! ACTGTTGATGTTTGTTATAA+AGG - chr5.3:67520738-67520757 MS.gene29697:CDS 25.0%
!!! TTATTTGAAGAGTTTTTCAG+TGG - chr5.3:67521013-67521032 MS.gene29697:CDS 25.0%
ATCCAAGATGTAAATTCAGA+AGG - chr5.3:67520846-67520865 MS.gene29697:CDS 30.0%
ATCGGATTATAGTTGTATTC+AGG - chr5.3:67520560-67520579 MS.gene29697:CDS 30.0%
CAACTATAATCCGATATATC+AGG + chr5.3:67520555-67520574 None:intergenic 30.0%
TATCGAAAAAGAGGAAAACT+AGG - chr5.3:67520187-67520206 MS.gene29697:CDS 30.0%
TCATAATCCAAATCCAGAAA+CGG + chr5.3:67521320-67521339 None:intergenic 30.0%
TTCCTTCTGAATTTACATCT+TGG + chr5.3:67520851-67520870 None:intergenic 30.0%
! AATAATCCGATTGATGATTC+TGG - chr5.3:67521095-67521114 MS.gene29697:CDS 30.0%
! ATAATCCGATTGATGATTCT+GGG - chr5.3:67521096-67521115 MS.gene29697:CDS 30.0%
!!! CTCTTTTTCGATAATTCCAA+CGG + chr5.3:67520180-67520199 None:intergenic 30.0%
AAAACTAGGAGTAGAGGAAA+AGG - chr5.3:67520201-67520220 MS.gene29697:CDS 35.0%
CAAAGTCTACTTCCTCTATT+TGG + chr5.3:67520441-67520460 None:intergenic 35.0%
CAAATAGAGGAAGTAGACTT+TGG - chr5.3:67520439-67520458 MS.gene29697:CDS 35.0%
CGTTGGAATTATCGAAAAAG+AGG - chr5.3:67520178-67520197 MS.gene29697:CDS 35.0%
CTTTATGCTGGTAAAGATGA+TGG - chr5.3:67520276-67520295 MS.gene29697:CDS 35.0%
GAAATTAGGGAACCAAATAG+AGG - chr5.3:67520426-67520445 MS.gene29697:CDS 35.0%
GATCTAAATCACGATTCAAG+AGG - chr5.3:67521338-67521357 MS.gene29697:CDS 35.0%
TCTAACACAACCACAAACAT+CGG - chr5.3:67520878-67520897 MS.gene29697:CDS 35.0%
TCTTGCTTCATTCTACTAGT+TGG + chr5.3:67520780-67520799 None:intergenic 35.0%
TTCATATGAACAGGTATCCT+AGG + chr5.3:67520714-67520733 None:intergenic 35.0%
! AAAGGGTGTATGAAAGGTAA+AGG - chr5.3:67520336-67520355 MS.gene29697:CDS 35.0%
! AAGTTTGGATTTTGGACAAG+TGG - chr5.3:67521127-67521146 MS.gene29697:CDS 35.0%
! ACAGTGTTGTTCATATGAAC+AGG + chr5.3:67520723-67520742 None:intergenic 35.0%
! AGTTTGGATTTTGGACAAGT+GGG - chr5.3:67521128-67521147 MS.gene29697:CDS 35.0%
! GACTTTGGTTAGGTACTTTT+CGG - chr5.3:67520454-67520473 MS.gene29697:CDS 35.0%
! GTGATGCAAAGTTTGGATTT+TGG - chr5.3:67521119-67521138 MS.gene29697:CDS 35.0%
! TAATCCGATTGATGATTCTG+GGG - chr5.3:67521097-67521116 MS.gene29697:CDS 35.0%
! TACAATGAGAAGCTTTATGC+TGG - chr5.3:67520264-67520283 MS.gene29697:CDS 35.0%
! TACTTATTCTCCGAGTTTTG+AGG + chr5.3:67520366-67520385 None:intergenic 35.0%
! TTGTGCTATTGAGGATGTTA+AGG - chr5.3:67520683-67520702 MS.gene29697:CDS 35.0%
!! ATGACCAGATGGATTTTTCA+TGG - chr5.3:67520964-67520983 MS.gene29697:CDS 35.0%
!! GAAATGGGTTGCTGAAATTA+GGG - chr5.3:67520413-67520432 MS.gene29697:CDS 35.0%
AACTGTGTCTAGTCATTCTG+AGG - chr5.3:67520659-67520678 MS.gene29697:CDS 40.0%
AAGAAAGTAATCCTCCGGTT+GGG - chr5.3:67521159-67521178 MS.gene29697:CDS 40.0%
AAGAGGAAAACTAGGAGTAG+AGG - chr5.3:67520195-67520214 MS.gene29697:CDS 40.0%
AATCCAGATGCTAAGCTGTT+GGG - chr5.3:67521212-67521231 MS.gene29697:CDS 40.0%
ACCTGAAGAAAGTAATCCTC+CGG - chr5.3:67521154-67521173 MS.gene29697:CDS 40.0%
AGAGGAAGTAGACTTTGGTT+AGG - chr5.3:67520444-67520463 MS.gene29697:CDS 40.0%
AGGATGTTAAGGAGATACCT+AGG - chr5.3:67520694-67520713 MS.gene29697:CDS 40.0%
ATATCATCAGGCTCATCCAT+TGG + chr5.3:67520804-67520823 None:intergenic 40.0%
ATCACCCCAGAATCATCAAT+CGG + chr5.3:67521104-67521123 None:intergenic 40.0%
ATTCAAGAGGAATGCAAGGA+AGG - chr5.3:67521351-67521370 MS.gene29697:CDS 40.0%
CCAAGGTCTATGATATCATC+AGG + chr5.3:67520816-67520835 None:intergenic 40.0%
CCATCCATGAAAAATCCATC+TGG + chr5.3:67520971-67520990 None:intergenic 40.0%
CCTGATGATATCATAGACCT+TGG - chr5.3:67520813-67520832 MS.gene29697:CDS 40.0%
CTAACACAACCACAAACATC+GGG - chr5.3:67520879-67520898 MS.gene29697:CDS 40.0%
GATGATATCATAGACCTTGG+TGG - chr5.3:67520816-67520835 MS.gene29697:CDS 40.0%
GGATTACCTCTGAACTTCAA+TGG - chr5.3:67521278-67521297 MS.gene29697:CDS 40.0%
TAAACCAAAGCGTAAAGCAC+CGG - chr5.3:67520299-67520318 MS.gene29697:CDS 40.0%
TAAAGGAGGACCTCAAAACT+CGG - chr5.3:67520353-67520372 MS.gene29697:CDS 40.0%
TAATCCAGATGCTAAGCTGT+TGG - chr5.3:67521211-67521230 MS.gene29697:CDS 40.0%
TAGAATGAAGCAAGAGCCAA+TGG - chr5.3:67520785-67520804 MS.gene29697:CDS 40.0%
TAGCTGAGACTCTAGCAAAA+TGG - chr5.3:67520235-67520254 MS.gene29697:CDS 40.0%
TCACGTGGATGATTTCTTTG+AGG - chr5.3:67521046-67521065 MS.gene29697:CDS 40.0%
TGAGACTCTAGCAAAATGGA+AGG - chr5.3:67520239-67520258 MS.gene29697:CDS 40.0%
TTACCTCTGAACTTCAATGG+CGG - chr5.3:67521281-67521300 MS.gene29697:CDS 40.0%
! AACTCGGAGAATAAGTATCG+AGG - chr5.3:67520369-67520388 MS.gene29697:CDS 40.0%
! AGATACACCGTTTCTGGATT+TGG - chr5.3:67521310-67521329 MS.gene29697:CDS 40.0%
! TCGAAGAAAGGGTGTATGAA+AGG - chr5.3:67520330-67520349 MS.gene29697:CDS 40.0%
!! CCAGATGGATTTTTCATGGA+TGG - chr5.3:67520968-67520987 MS.gene29697:CDS 40.0%
!! GGAAATGGGTTGCTGAAATT+AGG - chr5.3:67520412-67520431 MS.gene29697:CDS 40.0%
!! TTCTGAGGTTTGTGCTATTG+AGG - chr5.3:67520674-67520693 MS.gene29697:CDS 40.0%
!! TTTGAGGTGGATGAGCTTTT+GGG - chr5.3:67521062-67521081 MS.gene29697:CDS 40.0%
AAGCTTGAAGTAGTCCCAAC+CGG + chr5.3:67521176-67521195 None:intergenic 45.0%
ACAAACACACGATTCTGTGC+TGG - chr5.3:67520923-67520942 MS.gene29697:CDS 45.0%
ACCGGAGGATTACTTTCTTC+AGG + chr5.3:67521158-67521177 None:intergenic 45.0%
AGCACAGAATCGTGTGTTTG+TGG + chr5.3:67520924-67520943 None:intergenic 45.0%
AGCTGCTAGCTGTTGTTCTT+CGG - chr5.3:67520608-67520627 MS.gene29697:CDS 45.0%
AGGTGTTAGACAGAGGACTT+GGG - chr5.3:67520389-67520408 MS.gene29697:CDS 45.0%
AGTGGATGAGTTCTTTCACG+TGG - chr5.3:67521031-67521050 MS.gene29697:CDS 45.0%
ATCCAGATGCTAAGCTGTTG+GGG - chr5.3:67521213-67521232 MS.gene29697:CDS 45.0%
CACGATTCAAGAGGAATGCA+AGG - chr5.3:67521347-67521366 MS.gene29697:CDS 45.0%
CCTTTCTTCGAACCTTTAGC+CGG + chr5.3:67520321-67520340 None:intergenic 45.0%
CGGCTAAAGGTTCGAAGAAA+GGG - chr5.3:67520319-67520338 MS.gene29697:CDS 45.0%
GAAGAAAGTAATCCTCCGGT+TGG - chr5.3:67521158-67521177 MS.gene29697:CDS 45.0%
GATATCATAGACCTTGGTGG+TGG - chr5.3:67520819-67520838 MS.gene29697:CDS 45.0%
GATATGGAACACACAGCATC+AGG - chr5.3:67521245-67521264 MS.gene29697:CDS 45.0%
GATGCTGTGTGTTCCATATC+AGG + chr5.3:67521245-67521264 None:intergenic 45.0%
GGGTGTATGAAAGGTAAAGG+AGG - chr5.3:67520339-67520358 MS.gene29697:CDS 45.0%
TACCTCTGAACTTCAATGGC+GGG - chr5.3:67521282-67521301 MS.gene29697:CDS 45.0%
TATGCTGCTAGAGCCATGTA+TGG - chr5.3:67520507-67520526 MS.gene29697:CDS 45.0%
! AGTATCGAGGTGTTAGACAG+AGG - chr5.3:67520382-67520401 MS.gene29697:CDS 45.0%
! CGTGGATGATTTCTTTGAGG+TGG - chr5.3:67521049-67521068 MS.gene29697:CDS 45.0%
! GTTTGAGTTCCCGATGTTTG+TGG + chr5.3:67520891-67520910 None:intergenic 45.0%
! TTGAGGTGGATGAGCTTTTG+GGG - chr5.3:67521063-67521082 MS.gene29697:CDS 45.0%
!! ACAGCATCAGGTGTCGATTA+TGG - chr5.3:67521257-67521276 MS.gene29697:CDS 45.0%
!! TTCTGGGGTGATGCAAAGTT+TGG - chr5.3:67521112-67521131 MS.gene29697:CDS 45.0%
!!! CTTTGAGGTGGATGAGCTTT+TGG - chr5.3:67521061-67521080 MS.gene29697:CDS 45.0%
ACAGAGGACTTGGGGGAAAT+GGG - chr5.3:67520398-67520417 MS.gene29697:CDS 50.0%
ACCTCTGAACTTCAATGGCG+GGG - chr5.3:67521283-67521302 MS.gene29697:CDS 50.0%
CCGGCTAAAGGTTCGAAGAA+AGG - chr5.3:67520318-67520337 MS.gene29697:CDS 50.0%
CTTGGATTTCACCACCACCA+AGG + chr5.3:67520833-67520852 None:intergenic 50.0%
GGAAAGTTAAGTCGCGCAGA+AGG + chr5.3:67520534-67520553 None:intergenic 50.0%
GGGAGAAGATACACCGTTTC+TGG - chr5.3:67521304-67521323 MS.gene29697:CDS 50.0%
GGGTGTGTGTAATGACCAGA+TGG - chr5.3:67520953-67520972 MS.gene29697:CDS 50.0%
GGTGTTAGACAGAGGACTTG+GGG - chr5.3:67520390-67520409 MS.gene29697:CDS 50.0%
GTGTTAGACAGAGGACTTGG+GGG - chr5.3:67520391-67520410 MS.gene29697:CDS 50.0%
GTTGGGGAGTTTGCCTGATA+TGG - chr5.3:67521229-67521248 MS.gene29697:CDS 50.0%
GTTGTTGTCTCAGATGTCGC+AGG + chr5.3:67520642-67520661 None:intergenic 50.0%
TAATGCTTCTCTTGCGCCGT+TGG - chr5.3:67520161-67520180 MS.gene29697:CDS 50.0%
TTAGCCGGTGCTTTACGCTT+TGG + chr5.3:67520306-67520325 None:intergenic 50.0%
! ACACACGATTCTGTGCTGGT+TGG - chr5.3:67520927-67520946 MS.gene29697:CDS 50.0%
! GAGGTGTTAGACAGAGGACT+TGG - chr5.3:67520388-67520407 MS.gene29697:CDS 50.0%
!! AAGCGTAAAGCACCGGCTAA+AGG - chr5.3:67520306-67520325 MS.gene29697:CDS 50.0%
!! GATTCTGTGCTGGTTGGAGA+GGG - chr5.3:67520933-67520952 MS.gene29697:CDS 50.0%
CCTCTGAACTTCAATGGCGG+GGG - chr5.3:67521284-67521303 MS.gene29697:CDS 55.0%
CTCCCCAACAGCTTAGCATC+TGG + chr5.3:67521218-67521237 None:intergenic 55.0%
CTTGAAGTAGTCCCAACCGG+AGG + chr5.3:67521173-67521192 None:intergenic 55.0%
GACAGAGGACTTGGGGGAAA+TGG - chr5.3:67520397-67520416 MS.gene29697:CDS 55.0%
TCGCGCAGAAGGACCATACA+TGG + chr5.3:67520523-67520542 None:intergenic 55.0%
!! CGATTCTGTGCTGGTTGGAG+AGG - chr5.3:67520932-67520951 MS.gene29697:CDS 55.0%
CCCCCGCCATTGAAGTTCAG+AGG + chr5.3:67521287-67521306 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 67520132 67521385 67520132 ID=MS.gene29697
chr5.3 mRNA 67520132 67521385 67520132 ID=MS.gene29697.t1;Parent=MS.gene29697
chr5.3 exon 67520132 67521385 67520132 ID=MS.gene29697.t1.exon1;Parent=MS.gene29697.t1
chr5.3 CDS 67520132 67521385 67520132 ID=cds.MS.gene29697.t1;Parent=MS.gene29697.t1
Gene Sequence

>MS.gene29697

ATGGGTGCTCCTGCTTATGATCAATGTTTTAATGCTTCTCTTGCGCCGTTGGAATTATCGAAAAAGAGGAAAACTAGGAGTAGAGGAAAAGGAACTAAATCTGTAGCTGAGACTCTAGCAAAATGGAAGGAATACAATGAGAAGCTTTATGCTGGTAAAGATGATGGTAAACCAAAGCGTAAAGCACCGGCTAAAGGTTCGAAGAAAGGGTGTATGAAAGGTAAAGGAGGACCTCAAAACTCGGAGAATAAGTATCGAGGTGTTAGACAGAGGACTTGGGGGAAATGGGTTGCTGAAATTAGGGAACCAAATAGAGGAAGTAGACTTTGGTTAGGTACTTTTCGGACAGCTCAAGAAGCTGCTCTTGCTTATGATTATGCTGCTAGAGCCATGTATGGTCCTTCTGCGCGACTTAACTTTCCTGATATATCGGATTATAGTTGTATTCAGGAATATTTGAAAGATTCTTCAGCAGCAGCTGCTAGCTGTTGTTCTTCGGCAACAACGCCTGCGACATCTGAGACAACAACTGTGTCTAGTCATTCTGAGGTTTGTGCTATTGAGGATGTTAAGGAGATACCTAGGATACCTGTTCATATGAACAACACTGTTGATGTTTGTTATAAAGGTTATGAAGCTACATCTCCAACTAGTAGAATGAAGCAAGAGCCAATGGATGAGCCTGATGATATCATAGACCTTGGTGGTGGTGAAATCCAAGATGTAAATTCAGAAGGAACTCAAACTCTAACACAACCACAAACATCGGGAACTCAAACTCTAACACAACCACAAACACACGATTCTGTGCTGGTTGGAGAGGGTGTGTGTAATGACCAGATGGATTTTTCATGGATGGATAACTTTGACTTCACTGATGATTATTTGAAGAGTTTTTCAGTGGATGAGTTCTTTCACGTGGATGATTTCTTTGAGGTGGATGAGCTTTTGGGGCAAATAGATAATAATCCGATTGATGATTCTGGGGTGATGCAAAGTTTGGATTTTGGACAAGTGGGTTTACCTGAAGAAAGTAATCCTCCGGTTGGGACTACTTCAAGCTTCTTTTATGAATTGGATAATCCAGATGCTAAGCTGTTGGGGAGTTTGCCTGATATGGAACACACAGCATCAGGTGTCGATTATGGATTACCTCTGAACTTCAATGGCGGGGGAGAAGATACACCGTTTCTGGATTTGGATTATGATCTAAATCACGATTCAAGAGGAATGCAAGGAAGGAAAAATGATTAG
Protein sequence

>MS.gene29697.t1

MGAPAYDQCFNASLAPLELSKKRKTRSRGKGTKSVAETLAKWKEYNEKLYAGKDDGKPKRKAPAKGSKKGCMKGKGGPQNSENKYRGVRQRTWGKWVAEIREPNRGSRLWLGTFRTAQEAALAYDYAARAMYGPSARLNFPDISDYSCIQEYLKDSSAAAASCCSSATTPATSETTTVSSHSEVCAIEDVKEIPRIPVHMNNTVDVCYKGYEATSPTSRMKQEPMDEPDDIIDLGGGEIQDVNSEGTQTLTQPQTSGTQTLTQPQTHDSVLVGEGVCNDQMDFSWMDNFDFTDDYLKSFSVDEFFHVDDFFEVDELLGQIDNNPIDDSGVMQSLDFGQVGLPEESNPPVGTTSSFFYELDNPDAKLLGSLPDMEHTASGVDYGLPLNFNGGGEDTPFLDLDYDLNHDSRGMQGRKND