Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29792.t1 | XP_003602092.1 | 98.9 | 270 | 3 | 0 | 3 | 272 | 2 | 271 | 9.50E-151 | 542.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29792.t1 | O24361 | 83.4 | 271 | 45 | 0 | 1 | 271 | 1 | 271 | 3.9e-129 | 462.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29792.t1 | G7J5I9 | 98.9 | 270 | 3 | 0 | 3 | 272 | 2 | 271 | 6.9e-151 | 542.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene035129 | MS.gene29792 | PPI |
| MS.gene52459 | MS.gene29792 | PPI |
| MS.gene29792 | MS.gene037240 | PPI |
| MS.gene29792 | MS.gene46543 | PPI |
| MS.gene29792 | MS.gene022454 | PPI |
| MS.gene041280 | MS.gene29792 | PPI |
| MS.gene040231 | MS.gene29792 | PPI |
| MS.gene98293 | MS.gene29792 | PPI |
| MS.gene87139 | MS.gene29792 | PPI |
| MS.gene29792 | MS.gene71557 | PPI |
| MS.gene35561 | MS.gene29792 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29792.t1 | MTR_3g089040 | 98.889 | 270 | 3 | 0 | 3 | 272 | 2 | 271 | 0.0 | 552 |
| MS.gene29792.t1 | MTR_3g109210 | 31.351 | 185 | 125 | 2 | 55 | 238 | 13 | 196 | 1.02e-20 | 88.6 |
| MS.gene29792.t1 | MTR_7g032930 | 29.302 | 215 | 144 | 4 | 25 | 234 | 5 | 216 | 9.11e-18 | 81.3 |
| MS.gene29792.t1 | MTR_7g037830 | 29.302 | 215 | 144 | 4 | 25 | 234 | 5 | 216 | 9.58e-18 | 80.9 |
| MS.gene29792.t1 | MTR_1g112250 | 28.652 | 178 | 113 | 4 | 43 | 211 | 24 | 196 | 7.31e-15 | 72.4 |
| MS.gene29792.t1 | MTR_7g088490 | 25.926 | 189 | 138 | 2 | 55 | 241 | 8 | 196 | 1.38e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29792.t1 | AT3G26340 | 83.456 | 272 | 43 | 1 | 1 | 270 | 1 | 272 | 7.11e-168 | 465 |
| MS.gene29792.t1 | AT1G13060 | 82.288 | 271 | 46 | 1 | 1 | 269 | 1 | 271 | 1.34e-164 | 457 |
| MS.gene29792.t1 | AT1G13060 | 75.593 | 295 | 46 | 2 | 1 | 269 | 1 | 295 | 4.08e-159 | 444 |
| MS.gene29792.t1 | AT1G13060 | 75.593 | 295 | 46 | 2 | 1 | 269 | 1 | 295 | 4.08e-159 | 444 |
| MS.gene29792.t1 | AT4G31300 | 29.864 | 221 | 148 | 4 | 55 | 272 | 12 | 228 | 2.38e-23 | 95.5 |
| MS.gene29792.t1 | AT4G31300 | 29.864 | 221 | 148 | 4 | 55 | 272 | 12 | 228 | 2.38e-23 | 95.5 |
| MS.gene29792.t1 | AT4G31300 | 29.412 | 221 | 150 | 3 | 55 | 272 | 12 | 229 | 3.09e-23 | 95.1 |
| MS.gene29792.t1 | AT5G40580 | 31.401 | 207 | 134 | 4 | 25 | 226 | 6 | 209 | 7.02e-19 | 84.3 |
| MS.gene29792.t1 | AT5G40580 | 31.401 | 207 | 134 | 4 | 25 | 226 | 6 | 209 | 7.02e-19 | 84.3 |
| MS.gene29792.t1 | AT3G27430 | 29.767 | 215 | 143 | 4 | 25 | 234 | 6 | 217 | 1.69e-18 | 83.2 |
| MS.gene29792.t1 | AT3G27430 | 30.918 | 207 | 135 | 4 | 25 | 226 | 6 | 209 | 2.16e-18 | 82.8 |
| MS.gene29792.t1 | AT1G53850 | 29.213 | 178 | 112 | 4 | 43 | 211 | 24 | 196 | 4.94e-15 | 73.2 |
| MS.gene29792.t1 | AT1G53850 | 29.213 | 178 | 112 | 4 | 43 | 211 | 24 | 196 | 4.94e-15 | 73.2 |
| MS.gene29792.t1 | AT5G40580 | 29.612 | 206 | 133 | 4 | 25 | 226 | 6 | 203 | 7.03e-15 | 73.2 |
| MS.gene29792.t1 | AT5G40580 | 29.612 | 206 | 133 | 4 | 25 | 226 | 6 | 203 | 7.03e-15 | 73.2 |
| MS.gene29792.t1 | AT3G14290 | 28.652 | 178 | 113 | 4 | 43 | 211 | 24 | 196 | 1.40e-14 | 71.6 |
| MS.gene29792.t1 | AT3G27430 | 28.037 | 214 | 142 | 4 | 25 | 234 | 6 | 211 | 1.82e-14 | 72.0 |
Find 77 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCTGCTGATTGCCAATTT+TGG | 0.215321 | 3.4:-73431470 | MS.gene29792:CDS |
| CAAGATTCCTATGCCAAAAT+TGG | 0.255102 | 3.4:+73431457 | None:intergenic |
| AGTACTTACATCGTTGGAAT+TGG | 0.281197 | 3.4:+73432069 | None:intergenic |
| TCCACGGTGCTTGGGGTAAC+TGG | 0.283680 | 3.4:+73427979 | None:intergenic |
| TGCTGATTCTCGTGCTAGTA+TGG | 0.289149 | 3.4:-73431677 | MS.gene29792:CDS |
| TTTCTTGCTCCACGGTGCTT+GGG | 0.316398 | 3.4:+73427971 | None:intergenic |
| AGTGAAGGAGGAAGACTTAA+AGG | 0.345870 | 3.4:-73428900 | MS.gene29792:CDS |
| ATTTCTTGCTCCACGGTGCT+TGG | 0.356795 | 3.4:+73427970 | None:intergenic |
| AATGTTTGCAAGTAACTTAG+AGG | 0.367726 | 3.4:+73429089 | None:intergenic |
| GTTTACTATGTGGGACCAAC+TGG | 0.373655 | 3.4:-73428054 | MS.gene29792:CDS |
| TCCGTACATGCTTGGAACTA+TGG | 0.374162 | 3.4:-73431499 | MS.gene29792:CDS |
| TCTGGTTCACCATACGCTTA+TGG | 0.380445 | 3.4:-73428858 | MS.gene29792:CDS |
| AGCTTCTGAACTGGCTCGAC+GGG | 0.390728 | 3.4:-73428710 | MS.gene29792:CDS |
| TATATTCAAGGAGGGTGTTA+TGG | 0.396989 | 3.4:-73431704 | MS.gene29792:CDS |
| TCTGTTGGTACCATGATTGC+TGG | 0.409418 | 3.4:-73429039 | MS.gene29792:CDS |
| TCACATGGAATCAACGTTGC+TGG | 0.415463 | 3.4:-73432124 | MS.gene29792:CDS |
| TTATACTCTTATCGTGGAAT+GGG | 0.417208 | 3.4:-73429066 | MS.gene29792:CDS |
| GTACTTACATCGTTGGAATT+GGG | 0.423890 | 3.4:+73432070 | None:intergenic |
| GAAATTAATCCGTACATGCT+TGG | 0.424954 | 3.4:-73431507 | MS.gene29792:CDS |
| CAAGAAATGGTTGAGGCAGC+TGG | 0.428427 | 3.4:-73427955 | MS.gene29792:CDS |
| TTTATACTCTTATCGTGGAA+TGG | 0.430850 | 3.4:-73429067 | MS.gene29792:CDS |
| GAATTGGGAAGCTGGAACGA+TGG | 0.442973 | 3.4:+73432085 | None:intergenic |
| AGAGTTGTAGTACCCTTTGC+GGG | 0.459082 | 3.4:+73431733 | None:intergenic |
| TACATGCTTGGAACTATGGC+TGG | 0.475232 | 3.4:-73431495 | MS.gene29792:CDS |
| AAGAGTTGTAGTACCCTTTG+CGG | 0.475469 | 3.4:+73431732 | None:intergenic |
| AATTGGGAAGCTGGAACGAT+GGG | 0.478855 | 3.4:+73432086 | None:intergenic |
| AATAGATTCTCTGTAGGATC+TGG | 0.481073 | 3.4:-73428876 | MS.gene29792:CDS |
| TTCATCCCATCCAGCAATCA+TGG | 0.487665 | 3.4:+73429029 | None:intergenic |
| AATTGCGGAAGCTTCTGAAC+TGG | 0.489365 | 3.4:-73428719 | MS.gene29792:CDS |
| AAGCACCGTGGAGCAAGAAA+TGG | 0.490405 | 3.4:-73427968 | MS.gene29792:CDS |
| AAGAGAAGAATTTCAGTGAC+AGG | 0.491862 | 3.4:-73429114 | MS.gene29792:CDS |
| GCATAGGAATCTTGGCATCA+AGG | 0.492159 | 3.4:-73431448 | MS.gene29792:intron |
| TTCTTGCTCCACGGTGCTTG+GGG | 0.499865 | 3.4:+73427972 | None:intergenic |
| CATCGTTGGAATTGGGAAGC+TGG | 0.501956 | 3.4:+73432077 | None:intergenic |
| CTCAACCATTTCTTGCTCCA+CGG | 0.509567 | 3.4:+73427963 | None:intergenic |
| TGGTACCATGATTGCTGGAT+GGG | 0.520356 | 3.4:-73429034 | MS.gene29792:CDS |
| ATGATTTCAGTTTACTATGT+GGG | 0.524079 | 3.4:-73428063 | MS.gene29792:intron |
| ACCGCTAGCAACTCCACCAC+TGG | 0.524125 | 3.4:+73428657 | None:intergenic |
| TTCCCGTCTTTGATTTCACA+TGG | 0.532073 | 3.4:-73432139 | MS.gene29792:CDS |
| CGTGGAATGGGATTATCTGT+TGG | 0.534500 | 3.4:-73429054 | MS.gene29792:CDS |
| AAGCTTCTGAACTGGCTCGA+CGG | 0.538066 | 3.4:-73428711 | MS.gene29792:CDS |
| GCTGATTCTCGTGCTAGTAT+GGG | 0.545752 | 3.4:-73431676 | MS.gene29792:CDS |
| TTGGTACCATGATTGCTGGA+TGG | 0.548451 | 3.4:-73429035 | MS.gene29792:CDS |
| TTCCATGTGAAATCAAAGAC+GGG | 0.553880 | 3.4:+73432137 | None:intergenic |
| TATGATTTCAGTTTACTATG+TGG | 0.556479 | 3.4:-73428064 | MS.gene29792:intron |
| ATTCCATGTGAAATCAAAGA+CGG | 0.565258 | 3.4:+73432136 | None:intergenic |
| TATCATGCAACATTTCGTGA+TGG | 0.571275 | 3.4:-73428682 | MS.gene29792:CDS |
| GACAACTTCTTCCATCCAGT+TGG | 0.571970 | 3.4:+73428039 | None:intergenic |
| CAGATGGTGAAACCCGCAAA+GGG | 0.573024 | 3.4:-73431745 | MS.gene29792:CDS |
| ACTGGATGGAAGAAGTTGTC+TGG | 0.573264 | 3.4:-73428036 | MS.gene29792:CDS |
| GCCATAGTTCCAAGCATGTA+CGG | 0.574221 | 3.4:+73431498 | None:intergenic |
| TATTATGTTGATAGTGAAGG+AGG | 0.578210 | 3.4:-73428912 | MS.gene29792:CDS |
| TGTTAAAGAAGCTATTCAGA+TGG | 0.585333 | 3.4:-73431761 | MS.gene29792:CDS |
| CTATATTATGTTGATAGTGA+AGG | 0.590992 | 3.4:-73428915 | MS.gene29792:CDS |
| TTTCGTGATGGAGCCAGTGG+TGG | 0.600707 | 3.4:-73428670 | MS.gene29792:CDS |
| GATTGCTGGATGGGATGAAA+CGG | 0.603795 | 3.4:-73429025 | MS.gene29792:intron |
| CAAATATGACATGTCAATTG+CGG | 0.605413 | 3.4:-73428734 | MS.gene29792:CDS |
| GTTGTTTATAGCATCACAGT+CGG | 0.608148 | 3.4:-73431544 | MS.gene29792:intron |
| CTTATGGTGTACTCGACAGC+GGG | 0.610121 | 3.4:-73428842 | MS.gene29792:intron |
| GCAGTGTCGCTTGCATGAGT+TGG | 0.611171 | 3.4:-73429142 | MS.gene29792:intron |
| TCGAGTACACCATAAGCGTA+TGG | 0.612071 | 3.4:+73428849 | None:intergenic |
| TTGGGGTAACTGGATTGTAA+TGG | 0.614358 | 3.4:+73427989 | None:intergenic |
| TCAGATGGTGAAACCCGCAA+AGG | 0.618420 | 3.4:-73431746 | MS.gene29792:CDS |
| AAAGGCAATAGATTCTCTGT+AGG | 0.626532 | 3.4:-73428882 | MS.gene29792:CDS |
| GATTCTCGTGCTAGTATGGG+AGG | 0.632201 | 3.4:-73431673 | MS.gene29792:CDS |
| GCCAGTGGTGGAGTTGCTAG+CGG | 0.635532 | 3.4:-73428658 | MS.gene29792:intron |
| CGTGGAGCAAGAAATGGTTG+AGG | 0.636907 | 3.4:-73427962 | MS.gene29792:CDS |
| CGGGAATGATTCGAGAGCAG+TGG | 0.637862 | 3.4:+73432156 | None:intergenic |
| ACTATGTGGGACCAACTGGA+TGG | 0.638522 | 3.4:-73428050 | MS.gene29792:CDS |
| TTGGGAAGCTGGAACGATGG+GGG | 0.639176 | 3.4:+73432088 | None:intergenic |
| CTATCAACATAATATAGACC+AGG | 0.640233 | 3.4:+73428921 | None:intergenic |
| ATTGGGAAGCTGGAACGATG+GGG | 0.645551 | 3.4:+73432087 | None:intergenic |
| ATGCTTGGAACTATGGCTGG+AGG | 0.682884 | 3.4:-73431492 | MS.gene29792:CDS |
| ACATTTCGTGATGGAGCCAG+TGG | 0.704050 | 3.4:-73428673 | MS.gene29792:CDS |
| AAGTTGTCTGGTGATGATGT+TGG | 0.704292 | 3.4:-73428024 | MS.gene29792:CDS |
| TCCAGTTACCCCAAGCACCG+TGG | 0.707513 | 3.4:-73427980 | MS.gene29792:CDS |
| GCTTATGGTGTACTCGACAG+CGG | 0.721144 | 3.4:-73428843 | MS.gene29792:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGACAAAAATTATATAT+GGG | + | chr3.4:73430909-73430928 | None:intergenic | 10.0% |
| !! | TATATGACAAAAATTATATA+TGG | + | chr3.4:73430910-73430929 | None:intergenic | 10.0% |
| !! | TTTGATATTGTATATATTAA+AGG | + | chr3.4:73430615-73430634 | None:intergenic | 10.0% |
| !!! | AAATTAGAAGAATTTTATTT+AGG | - | chr3.4:73428208-73428227 | MS.gene29792:intron | 10.0% |
| !!! | AATTAGAAGAATTTTATTTA+GGG | - | chr3.4:73428209-73428228 | MS.gene29792:intron | 10.0% |
| !! | ATTAATTAATGTCACTAAAT+TGG | - | chr3.4:73432019-73432038 | MS.gene29792:intron | 15.0% |
| !! | TAATTTATAATGTATGCATA+TGG | - | chr3.4:73430299-73430318 | MS.gene29792:intron | 15.0% |
| !!! | CTTTTTTTTTTTTTCTTCTT+TGG | - | chr3.4:73428492-73428511 | MS.gene29792:intron | 15.0% |
| !!! | TAAAACAGTTATAATGTTTT+GGG | + | chr3.4:73431822-73431841 | None:intergenic | 15.0% |
| !!! | TCTTTAAGATAAAATACTAT+AGG | - | chr3.4:73431887-73431906 | MS.gene29792:intron | 15.0% |
| !!! | TTTTTTTTTTGTTGTATGTT+TGG | - | chr3.4:73430384-73430403 | MS.gene29792:intron | 15.0% |
| !! | AACAATACAAAGAACATAAA+TGG | + | chr3.4:73430165-73430184 | None:intergenic | 20.0% |
| !! | AACCAAAAATTAGAATAGAT+GGG | - | chr3.4:73429787-73429806 | MS.gene29792:intron | 20.0% |
| !! | AACCGTAAAATTAAAAACAT+TGG | + | chr3.4:73428184-73428203 | None:intergenic | 20.0% |
| !! | AATCAGTACAAACTAAATTT+AGG | - | chr3.4:73428115-73428134 | MS.gene29792:intron | 20.0% |
| !! | ACCGTAAAATTAAAAACATT+GGG | + | chr3.4:73428183-73428202 | None:intergenic | 20.0% |
| !! | AGTTATCTATATTGTTAATG+TGG | + | chr3.4:73431583-73431602 | None:intergenic | 20.0% |
| !! | GTTATCTATATTGTTAATGT+GGG | + | chr3.4:73431582-73431601 | None:intergenic | 20.0% |
| !! | TAGGATCAATTAAAAGTTAT+AGG | - | chr3.4:73429830-73429849 | MS.gene29792:intron | 20.0% |
| !! | TCAGCTAATTGATAAAAAAA+AGG | + | chr3.4:73430752-73430771 | None:intergenic | 20.0% |
| !! | TTTAGGAAGCAATTAAATAT+AGG | - | chr3.4:73428924-73428943 | MS.gene29792:CDS | 20.0% |
| !! | TTTATTGCTATATACTTGTA+AGG | - | chr3.4:73431990-73432009 | MS.gene29792:intron | 20.0% |
| !!! | ATTTTTTTCCACTTAAGAAA+TGG | - | chr3.4:73430082-73430101 | MS.gene29792:intron | 20.0% |
| !!! | GTAAAACAGTTATAATGTTT+TGG | + | chr3.4:73431823-73431842 | None:intergenic | 20.0% |
| !!! | GTGTTTGTTATTGTTTTTAT+GGG | - | chr3.4:73430661-73430680 | MS.gene29792:intron | 20.0% |
| !!! | TGCAAAAATAAGTTTTTTGT+TGG | - | chr3.4:73429161-73429180 | MS.gene29792:intron | 20.0% |
| !!! | TGTGTTTGTTATTGTTTTTA+TGG | - | chr3.4:73430660-73430679 | MS.gene29792:intron | 20.0% |
| !!! | TTTATGTTTTTGTGAAATTG+TGG | - | chr3.4:73428232-73428251 | MS.gene29792:intron | 20.0% |
| !!! | TTTTAAAACTCAACTAAAAC+TGG | - | chr3.4:73429998-73430017 | MS.gene29792:intron | 20.0% |
| !!! | TTTTTTTTCTTCTTTGGTAT+TGG | - | chr3.4:73428498-73428517 | MS.gene29792:intron | 20.0% |
| ! | AATAATAGAAGAGAAATGCT+AGG | + | chr3.4:73429533-73429552 | None:intergenic | 25.0% |
| ! | AATTGCTATGACATAATCAA+GGG | + | chr3.4:73428804-73428823 | None:intergenic | 25.0% |
| ! | ACAAATTCATCTTGTAGAAA+AGG | + | chr3.4:73428983-73429002 | None:intergenic | 25.0% |
| ! | ACAGACCAAAAAATTATACA+AGG | + | chr3.4:73430708-73430727 | None:intergenic | 25.0% |
| ! | ACCAAAAAACATAATGAGTT+AGG | + | chr3.4:73430799-73430818 | None:intergenic | 25.0% |
| ! | ACCAAAAAATTATACAAGGA+GGG | + | chr3.4:73430704-73430723 | None:intergenic | 25.0% |
| ! | ACCAAAAATTAGAATAGATG+GGG | - | chr3.4:73429788-73429807 | MS.gene29792:intron | 25.0% |
| ! | ACTTACTTGAAAATAGTTTG+TGG | - | chr3.4:73431850-73431869 | MS.gene29792:intron | 25.0% |
| ! | ATGATTTCAGTTTACTATGT+GGG | - | chr3.4:73432054-73432073 | MS.gene29792:intron | 25.0% |
| ! | CAACCAAAAATTAGAATAGA+TGG | - | chr3.4:73429786-73429805 | MS.gene29792:intron | 25.0% |
| ! | CTCATAATAGAAACTAACTA+GGG | + | chr3.4:73429350-73429369 | None:intergenic | 25.0% |
| ! | GAATGAATTGAATAAAGAGT+AGG | - | chr3.4:73428258-73428277 | MS.gene29792:intron | 25.0% |
| ! | TAATTGAAAATCATTGACAG+TGG | + | chr3.4:73429675-73429694 | None:intergenic | 25.0% |
| ! | TAATTGCTATGACATAATCA+AGG | + | chr3.4:73428805-73428824 | None:intergenic | 25.0% |
| ! | TATGATTTCAGTTTACTATG+TGG | - | chr3.4:73432053-73432072 | MS.gene29792:intron | 25.0% |
| ! | TCTATATATGCCATAACTAA+AGG | + | chr3.4:73429750-73429769 | None:intergenic | 25.0% |
| ! | TGAATCTATGTAGATATTAC+TGG | - | chr3.4:73430829-73430848 | MS.gene29792:intron | 25.0% |
| ! | TTAATTGATCCTACTTTGTT+AGG | + | chr3.4:73429823-73429842 | None:intergenic | 25.0% |
| ! | TTTAGTTATGGCATATATAG+AGG | - | chr3.4:73429749-73429768 | MS.gene29792:intron | 25.0% |
| ! | TTTGAGCAAAAAACCATTTA+CGG | + | chr3.4:73431134-73431153 | None:intergenic | 25.0% |
| !! | AACATTTTATACTCTTATCG+TGG | - | chr3.4:73431045-73431064 | MS.gene29792:intron | 25.0% |
| !! | ATAGCATTGAAACTAAATCA+TGG | + | chr3.4:73429581-73429600 | None:intergenic | 25.0% |
| !! | ATTGATTGACTTTGTTCATA+TGG | - | chr3.4:73430856-73430875 | MS.gene29792:intron | 25.0% |
| !! | ATTTTTGTCATATATATCCG+AGG | - | chr3.4:73430916-73430935 | MS.gene29792:intron | 25.0% |
| !! | TAATTTGTATTCCTTCAACT+TGG | - | chr3.4:73430194-73430213 | MS.gene29792:intron | 25.0% |
| !! | TCAATACTCACTCTTTTATT+GGG | + | chr3.4:73429490-73429509 | None:intergenic | 25.0% |
| !! | TTCAATACTCACTCTTTTAT+TGG | + | chr3.4:73429491-73429510 | None:intergenic | 25.0% |
| !!! | AACTCTTGCTTTTATATTCA+AGG | - | chr3.4:73428401-73428420 | MS.gene29792:intron | 25.0% |
| !!! | ACAAACTATTTTCAAGTAAG+TGG | + | chr3.4:73431851-73431870 | None:intergenic | 25.0% |
| !!! | ACAATGATTGGTCTTTTTTT+AGG | - | chr3.4:73431171-73431190 | MS.gene29792:intron | 25.0% |
| !!! | ATCTGAATTGTTTTGTGTTT+GGG | - | chr3.4:73428312-73428331 | MS.gene29792:intron | 25.0% |
| !!! | ATTTTTGCAGTTTTGAGTTT+TGG | + | chr3.4:73429150-73429169 | None:intergenic | 25.0% |
| !!! | CAATGATTGGTCTTTTTTTA+GGG | - | chr3.4:73431172-73431191 | MS.gene29792:intron | 25.0% |
| !!! | CTATATTATGTTGATAGTGA+AGG | - | chr3.4:73431202-73431221 | MS.gene29792:intron | 25.0% |
| !!! | CTCAAAATCAAAACTGATTT+TGG | - | chr3.4:73429964-73429983 | MS.gene29792:intron | 25.0% |
| !!! | GAATTTGTTTCGAGTTTTTA+GGG | - | chr3.4:73428995-73429014 | MS.gene29792:intron | 25.0% |
| !!! | GCCCAATGTTTTTAATTTTA+CGG | - | chr3.4:73428179-73428198 | MS.gene29792:intron | 25.0% |
| !!! | TATCTGAATTGTTTTGTGTT+TGG | - | chr3.4:73428311-73428330 | MS.gene29792:intron | 25.0% |
| !!! | TGAATTTGTTTCGAGTTTTT+AGG | - | chr3.4:73428994-73429013 | MS.gene29792:intron | 25.0% |
| !!! | TTATTTTGGCTTACAATGAT+TGG | - | chr3.4:73431159-73431178 | MS.gene29792:intron | 25.0% |
| !!! | TTGCTCAAATTGTCTTATTT+TGG | - | chr3.4:73431145-73431164 | MS.gene29792:intron | 25.0% |
| !!! | TTTTTGCAGTTTTGAGTTTT+GGG | + | chr3.4:73429149-73429168 | None:intergenic | 25.0% |
| AAAGAGTAGGTTGTAGAAAA+AGG | - | chr3.4:73428271-73428290 | MS.gene29792:intron | 30.0% | |
| AAAGGAAGTCTGAATCAAAA+TGG | + | chr3.4:73430734-73430753 | None:intergenic | 30.0% | |
| AACCCAAGATCTTAATCTAA+GGG | - | chr3.4:73429020-73429039 | MS.gene29792:intron | 30.0% | |
| AATGTTTGCAAGTAACTTAG+AGG | + | chr3.4:73431031-73431050 | None:intergenic | 30.0% | |
| ACCGGGTATATTAGTATATT+AGG | - | chr3.4:73430530-73430549 | MS.gene29792:intron | 30.0% | |
| AGAAACTAACTAGGGAATAA+AGG | + | chr3.4:73429342-73429361 | None:intergenic | 30.0% | |
| AGTATAAACATGCTACAAAC+TGG | + | chr3.4:73428859-73428878 | None:intergenic | 30.0% | |
| ATAGATAAAGCTGGTCAATA+GGG | + | chr3.4:73431500-73431519 | None:intergenic | 30.0% | |
| ATCTATATTGTTAATGTGGG+AGG | + | chr3.4:73431579-73431598 | None:intergenic | 30.0% | |
| ATGTAAGCATAGAAGATAGA+AGG | + | chr3.4:73428708-73428727 | None:intergenic | 30.0% | |
| ATTCCATGTGAAATCAAAGA+CGG | + | chr3.4:73427984-73428003 | None:intergenic | 30.0% | |
| CAAATATGACATGTCAATTG+CGG | - | chr3.4:73431383-73431402 | MS.gene29792:intron | 30.0% | |
| CAGCGTGTTTAAAAATTTGA+AGG | - | chr3.4:73430323-73430342 | MS.gene29792:intron | 30.0% | |
| CCTCATAATAGAAACTAACT+AGG | + | chr3.4:73429351-73429370 | None:intergenic | 30.0% | |
| CTATCAACATAATATAGACC+AGG | + | chr3.4:73431199-73431218 | None:intergenic | 30.0% | |
| GACCAAAAAATTATACAAGG+AGG | + | chr3.4:73430705-73430724 | None:intergenic | 30.0% | |
| GATGTGAATGCATTATAAGT+TGG | + | chr3.4:73430355-73430374 | None:intergenic | 30.0% | |
| GCCTAATATACTAATATACC+CGG | + | chr3.4:73430534-73430553 | None:intergenic | 30.0% | |
| GCGATGAATGATTTCATAAT+CGG | + | chr3.4:73428086-73428105 | None:intergenic | 30.0% | |
| GGAAGCAATTAAATATAGGA+AGG | - | chr3.4:73428928-73428947 | MS.gene29792:intron | 30.0% | |
| TAACCCAAGATCTTAATCTA+AGG | - | chr3.4:73429019-73429038 | MS.gene29792:intron | 30.0% | |
| TATATATCCGAGGTTACAAA+TGG | - | chr3.4:73430926-73430945 | MS.gene29792:intron | 30.0% | |
| TATTAGTGACCTAACAAAGT+AGG | - | chr3.4:73429811-73429830 | MS.gene29792:intron | 30.0% | |
| TCATGTCTAAAGGTTATTCA+TGG | + | chr3.4:73430479-73430498 | None:intergenic | 30.0% | |
| TGGAAATACCATTTCTTAAG+TGG | + | chr3.4:73430093-73430112 | None:intergenic | 30.0% | |
| TGTAGCATGTTTATACTCAA+TGG | - | chr3.4:73428862-73428881 | MS.gene29792:CDS | 30.0% | |
| TGTTAAAGAAGCTATTCAGA+TGG | - | chr3.4:73428356-73428375 | MS.gene29792:intron | 30.0% | |
| TTATACTCTTATCGTGGAAT+GGG | - | chr3.4:73431051-73431070 | MS.gene29792:intron | 30.0% | |
| TTGAAACAGATAGATAAAGC+TGG | + | chr3.4:73431509-73431528 | None:intergenic | 30.0% | |
| TTGAGCAAAAAACCATTTAC+GGG | + | chr3.4:73431133-73431152 | None:intergenic | 30.0% | |
| TTTAATTGCTTCCTAAACAC+AGG | + | chr3.4:73428921-73428940 | None:intergenic | 30.0% | |
| TTTATACTCTTATCGTGGAA+TGG | - | chr3.4:73431050-73431069 | MS.gene29792:intron | 30.0% | |
| ! | ACCCCATCTATTCTAATTTT+TGG | + | chr3.4:73429792-73429811 | None:intergenic | 30.0% |
| ! | ATTTGTTAATGTACTCCTAG+AGG | - | chr3.4:73431679-73431698 | MS.gene29792:CDS | 30.0% |
| ! | CAAACACTCACTCTTTTATT+GGG | - | chr3.4:73429404-73429423 | MS.gene29792:intron | 30.0% |
| ! | CCTAGTTAGTTTCTATTATG+AGG | - | chr3.4:73429348-73429367 | MS.gene29792:intron | 30.0% |
| ! | CTTCAAATTTTTAAACACGC+TGG | + | chr3.4:73430325-73430344 | None:intergenic | 30.0% |
| ! | TCAAACACTCACTCTTTTAT+TGG | - | chr3.4:73429403-73429422 | MS.gene29792:intron | 30.0% |
| ! | TGGTTTTTGTCAATATACAG+TGG | + | chr3.4:73429561-73429580 | None:intergenic | 30.0% |
| ! | TTCAGGGGTTTTTATTGATA+GGG | + | chr3.4:73429231-73429250 | None:intergenic | 30.0% |
| !! | ATGTTTTTGTGAAATTGTGG+AGG | - | chr3.4:73428235-73428254 | MS.gene29792:intron | 30.0% |
| !! | CTTGCTTTTATATTCAAGGA+GGG | - | chr3.4:73428405-73428424 | MS.gene29792:intron | 30.0% |
| !! | GAAAAAAGTACTTACATCGT+TGG | + | chr3.4:73428057-73428076 | None:intergenic | 30.0% |
| !! | TATTATGTTGATAGTGAAGG+AGG | - | chr3.4:73431205-73431224 | MS.gene29792:intron | 30.0% |
| !! | TCTTGCTTTTATATTCAAGG+AGG | - | chr3.4:73428404-73428423 | MS.gene29792:intron | 30.0% |
| !! | TGTTTTTGTGAAATTGTGGA+GGG | - | chr3.4:73428236-73428255 | MS.gene29792:intron | 30.0% |
| !! | TTGTTTTGTGTTTGGGATTT+TGG | - | chr3.4:73428319-73428338 | MS.gene29792:intron | 30.0% |
| !!! | ACAGTTATAATGTTTTGGGA+TGG | + | chr3.4:73431818-73431837 | None:intergenic | 30.0% |
| !!! | GCCTAACTCATTATGTTTTT+TGG | - | chr3.4:73430795-73430814 | MS.gene29792:intron | 30.0% |
| AAAATGGATCCCACATAAAG+TGG | - | chr3.4:73429454-73429473 | MS.gene29792:intron | 35.0% | |
| AAAGGCAATAGATTCTCTGT+AGG | - | chr3.4:73431235-73431254 | MS.gene29792:intron | 35.0% | |
| AAGAGAAGAATTTCAGTGAC+AGG | - | chr3.4:73431003-73431022 | MS.gene29792:intron | 35.0% | |
| AATAGATTCTCTGTAGGATC+TGG | - | chr3.4:73431241-73431260 | MS.gene29792:intron | 35.0% | |
| ACTCTTTCTTGCAAAAAGTG+AGG | + | chr3.4:73431770-73431789 | None:intergenic | 35.0% | |
| AGAAAAGCCATTTGTAACCT+CGG | + | chr3.4:73430936-73430955 | None:intergenic | 35.0% | |
| AGCAATTTCTTTATCACGCT+AGG | - | chr3.4:73431358-73431377 | MS.gene29792:intron | 35.0% | |
| AGCATAGAAGATAGAAGGAA+AGG | + | chr3.4:73428703-73428722 | None:intergenic | 35.0% | |
| AGTACTTACATCGTTGGAAT+TGG | + | chr3.4:73428051-73428070 | None:intergenic | 35.0% | |
| CAAGATTCCTATGCCAAAAT+TGG | + | chr3.4:73428663-73428682 | None:intergenic | 35.0% | |
| CACCCTTAGATTAAGATCTT+GGG | + | chr3.4:73429025-73429044 | None:intergenic | 35.0% | |
| CTCTTTCTTGCAAAAAGTGA+GGG | + | chr3.4:73431769-73431788 | None:intergenic | 35.0% | |
| CTTAATACGAAATAACCTGC+AGG | + | chr3.4:73428774-73428793 | None:intergenic | 35.0% | |
| CTTCAGTGTTCGTTTAGTAT+GGG | - | chr3.4:73429720-73429739 | MS.gene29792:intron | 35.0% | |
| GAAATTAATCCGTACATGCT+TGG | - | chr3.4:73428610-73428629 | MS.gene29792:intron | 35.0% | |
| GAATTATATAGAACAGCCAC+CGG | + | chr3.4:73430268-73430287 | None:intergenic | 35.0% | |
| GATAGATAAAGCTGGTCAAT+AGG | + | chr3.4:73431501-73431520 | None:intergenic | 35.0% | |
| GTACTTACATCGTTGGAATT+GGG | + | chr3.4:73428050-73428069 | None:intergenic | 35.0% | |
| GTTGTTTATAGCATCACAGT+CGG | - | chr3.4:73428573-73428592 | MS.gene29792:intron | 35.0% | |
| TAGATAAAGCTGGTCAATAG+GGG | + | chr3.4:73431499-73431518 | None:intergenic | 35.0% | |
| TATCATGCAACATTTCGTGA+TGG | - | chr3.4:73431435-73431454 | MS.gene29792:intron | 35.0% | |
| TATGGGGATTCCTTTAGTTA+TGG | - | chr3.4:73429737-73429756 | MS.gene29792:intron | 35.0% | |
| TATTGATAGGGTGAGTGAAA+GGG | + | chr3.4:73429219-73429238 | None:intergenic | 35.0% | |
| TCTCATCAAAAGAGAGATGA+TGG | + | chr3.4:73429269-73429288 | None:intergenic | 35.0% | |
| TCTTCAGTGTTCGTTTAGTA+TGG | - | chr3.4:73429719-73429738 | MS.gene29792:intron | 35.0% | |
| TTATTGATAGGGTGAGTGAA+AGG | + | chr3.4:73429220-73429239 | None:intergenic | 35.0% | |
| TTCAGTGTTCGTTTAGTATG+GGG | - | chr3.4:73429721-73429740 | MS.gene29792:intron | 35.0% | |
| TTCCAAAACCAAAACGTGTT+CGG | - | chr3.4:73429072-73429091 | MS.gene29792:CDS | 35.0% | |
| TTCCATGTGAAATCAAAGAC+GGG | + | chr3.4:73427983-73428002 | None:intergenic | 35.0% | |
| TTCTATTATGAGGAGTGATG+TGG | - | chr3.4:73429358-73429377 | MS.gene29792:intron | 35.0% | |
| TTGATGCTTGAAGTTATCGA+TGG | - | chr3.4:73428138-73428157 | MS.gene29792:intron | 35.0% | |
| TTTGTATGTCAACCCGTAAA+TGG | - | chr3.4:73431118-73431137 | MS.gene29792:intron | 35.0% | |
| ! | AAAATACCATGCCAAGTTGA+AGG | + | chr3.4:73430208-73430227 | None:intergenic | 35.0% |
| ! | ACTCACTCTTTTATTGGGAT+GGG | + | chr3.4:73429485-73429504 | None:intergenic | 35.0% |
| ! | ATGGGTTTTACCACTTTATG+TGG | + | chr3.4:73429467-73429486 | None:intergenic | 35.0% |
| ! | GCTCTAAATACTTTCTATGC+CGG | - | chr3.4:73430246-73430265 | MS.gene29792:intron | 35.0% |
| ! | GTTCAGGGGTTTTTATTGAT+AGG | + | chr3.4:73429232-73429251 | None:intergenic | 35.0% |
| ! | TACAAATGGCTTTTCTGATG+TGG | - | chr3.4:73430940-73430959 | MS.gene29792:intron | 35.0% |
| ! | TACTCACTCTTTTATTGGGA+TGG | + | chr3.4:73429486-73429505 | None:intergenic | 35.0% |
| ! | TGGCATGGTATTTTCATTGA+AGG | - | chr3.4:73430214-73430233 | MS.gene29792:intron | 35.0% |
| ! | TGGGTTTTACCACTTTATGT+GGG | + | chr3.4:73429466-73429485 | None:intergenic | 35.0% |
| ! | TGTGTATTGCTGTTGCAAAA+AGG | + | chr3.4:73431965-73431984 | None:intergenic | 35.0% |
| !! | AGGCTTGGATGTTATTTCAT+TGG | - | chr3.4:73430506-73430525 | MS.gene29792:intron | 35.0% |
| !! | CAATTTTGGCATAGGAATCT+TGG | - | chr3.4:73428661-73428680 | MS.gene29792:CDS | 35.0% |
| !! | TATATTCAAGGAGGGTGTTA+TGG | - | chr3.4:73428413-73428432 | MS.gene29792:intron | 35.0% |
| !! | TGTTTTTCTGTTTCTCCCAT+CGG | - | chr3.4:73429191-73429210 | MS.gene29792:intron | 35.0% |
| !!! | GCCCTCCTTGTATAATTTTT+TGG | - | chr3.4:73430700-73430719 | MS.gene29792:intron | 35.0% |
| AAGAGTTGTAGTACCCTTTG+CGG | + | chr3.4:73428388-73428407 | None:intergenic | 40.0% | |
| ACAGAAAACTATCCCAAACG+AGG | - | chr3.4:73430044-73430063 | MS.gene29792:intron | 40.0% | |
| AGTGAAGGAGGAAGACTTAA+AGG | - | chr3.4:73431217-73431236 | MS.gene29792:intron | 40.0% | |
| ATGCTACAAGTAACACCTCT+AGG | + | chr3.4:73431697-73431716 | None:intergenic | 40.0% | |
| ATTCTAATCTTGCTCTTCGC+TGG | - | chr3.4:73429611-73429630 | MS.gene29792:intron | 40.0% | |
| CAAGTCCCACACTTTCAAAA+TGG | - | chr3.4:73429438-73429457 | MS.gene29792:intron | 40.0% | |
| CAGTTATAACCATGAACGAG+TGG | + | chr3.4:73430570-73430589 | None:intergenic | 40.0% | |
| CCAAGATCTTAATCTAAGGG+TGG | - | chr3.4:73429023-73429042 | MS.gene29792:intron | 40.0% | |
| CCACCCTTAGATTAAGATCT+TGG | + | chr3.4:73429026-73429045 | None:intergenic | 40.0% | |
| CCTGAGTGTATCATGTCTAA+AGG | + | chr3.4:73430489-73430508 | None:intergenic | 40.0% | |
| CCTTTAGACATGATACACTC+AGG | - | chr3.4:73430486-73430505 | MS.gene29792:intron | 40.0% | |
| CTAAATACTTTCTATGCCGG+TGG | - | chr3.4:73430249-73430268 | MS.gene29792:intron | 40.0% | |
| GACTCACTCACACAGATATA+AGG | - | chr3.4:73431541-73431560 | MS.gene29792:intron | 40.0% | |
| GAGAAAGTTATGCCTCGTTT+GGG | + | chr3.4:73430059-73430078 | None:intergenic | 40.0% | |
| GAGTTAGGCATACATGAAGA+AGG | + | chr3.4:73430784-73430803 | None:intergenic | 40.0% | |
| GTATGTTTGGCAAACTCCAA+GGG | - | chr3.4:73430397-73430416 | MS.gene29792:intron | 40.0% | |
| TATCTTAGTTAAGTGCCTGC+AGG | - | chr3.4:73428756-73428775 | MS.gene29792:intron | 40.0% | |
| TATTGAGATCCACTCGTTCA+TGG | - | chr3.4:73430558-73430577 | MS.gene29792:intron | 40.0% | |
| TGAGAAAGTTATGCCTCGTT+TGG | + | chr3.4:73430060-73430079 | None:intergenic | 40.0% | |
| TGTATGTTTGGCAAACTCCA+AGG | - | chr3.4:73430396-73430415 | MS.gene29792:intron | 40.0% | |
| TGTATTCCTTCAACTTGGCA+TGG | - | chr3.4:73430199-73430218 | MS.gene29792:intron | 40.0% | |
| TTGGGGTAACTGGATTGTAA+TGG | + | chr3.4:73432131-73432150 | None:intergenic | 40.0% | |
| ! | AAAAAGTGAGGGTACAGTAG+CGG | + | chr3.4:73431758-73431777 | None:intergenic | 40.0% |
| ! | AAGTTGTCTGGTGATGATGT+TGG | - | chr3.4:73432093-73432112 | MS.gene29792:CDS | 40.0% |
| ! | GTTTTACACCGAACACGTTT+TGG | + | chr3.4:73429083-73429102 | None:intergenic | 40.0% |
| ! | TGCTTGAGCATGGATTACAA+TGG | + | chr3.4:73430426-73430445 | None:intergenic | 40.0% |
| ! | TTCCCGTCTTTGATTTCACA+TGG | - | chr3.4:73427978-73427997 | MS.gene29792:CDS | 40.0% |
| !! | AACGTGTTCGGTGTAAAACT+AGG | - | chr3.4:73429084-73429103 | MS.gene29792:CDS | 40.0% |
| !! | CTGATTGCCAATTTTGGCAT+AGG | - | chr3.4:73428653-73428672 | MS.gene29792:intron | 40.0% |
| !! | GATGTTATTTCATTGGCACC+GGG | - | chr3.4:73430513-73430532 | MS.gene29792:intron | 40.0% |
| !! | GGATGTTATTTCATTGGCAC+CGG | - | chr3.4:73430512-73430531 | MS.gene29792:intron | 40.0% |
| !! | GGGATCCATTTTGAAAGTGT+GGG | + | chr3.4:73429446-73429465 | None:intergenic | 40.0% |
| !! | GGTTGTTTGTTTCTGTTCAC+TGG | - | chr3.4:73429632-73429651 | MS.gene29792:intron | 40.0% |
| !! | GTTTTTCTGTTTCTCCCATC+GGG | - | chr3.4:73429192-73429211 | MS.gene29792:intron | 40.0% |
| !! | TGGGATCCATTTTGAAAGTG+TGG | + | chr3.4:73429447-73429466 | None:intergenic | 40.0% |
| !! | TGGGATTTTGGTAGTTCGAT+GGG | - | chr3.4:73428331-73428350 | MS.gene29792:intron | 40.0% |
| !! | TTGGGATTTTGGTAGTTCGA+TGG | - | chr3.4:73428330-73428349 | MS.gene29792:intron | 40.0% |
| !!! | TTGGTCTTTTTTTAGGGTCC+TGG | - | chr3.4:73431178-73431197 | MS.gene29792:intron | 40.0% |
| AAAACCGTTTGCATCTTGCC+TGG | + | chr3.4:73430130-73430149 | None:intergenic | 45.0% | |
| AATTGCGGAAGCTTCTGAAC+TGG | - | chr3.4:73431398-73431417 | MS.gene29792:intron | 45.0% | |
| AATTGGGAAGCTGGAACGAT+GGG | + | chr3.4:73428034-73428053 | None:intergenic | 45.0% | |
| ACTGGATGGAAGAAGTTGTC+TGG | - | chr3.4:73432081-73432100 | MS.gene29792:CDS | 45.0% | |
| AGACATGATACACTCAGGCT+TGG | - | chr3.4:73430491-73430510 | MS.gene29792:intron | 45.0% | |
| AGAGTTGTAGTACCCTTTGC+GGG | + | chr3.4:73428387-73428406 | None:intergenic | 45.0% | |
| CACTATTGTGTGCTTGAGCA+TGG | + | chr3.4:73430436-73430455 | None:intergenic | 45.0% | |
| CGTGGAATGGGATTATCTGT+TGG | - | chr3.4:73431063-73431082 | MS.gene29792:intron | 45.0% | |
| CTCAACCATTTCTTGCTCCA+CGG | + | chr3.4:73432157-73432176 | None:intergenic | 45.0% | |
| CTGTGATAGAGGAAGTTCAG+GGG | + | chr3.4:73429246-73429265 | None:intergenic | 45.0% | |
| GAATAAAGGCCGCATACAGA+AGG | + | chr3.4:73429328-73429347 | None:intergenic | 45.0% | |
| GACAACTTCTTCCATCCAGT+TGG | + | chr3.4:73432081-73432100 | None:intergenic | 45.0% | |
| GACTCACTGACACACACATA+AGG | - | chr3.4:73431613-73431632 | MS.gene29792:intron | 45.0% | |
| GATTGCTGGATGGGATGAAA+CGG | - | chr3.4:73431092-73431111 | MS.gene29792:intron | 45.0% | |
| GCAAAAAGGCTGACCTAGTT+AGG | + | chr3.4:73431951-73431970 | None:intergenic | 45.0% | |
| GCATACAGAAGGAATTGGGA+CGG | + | chr3.4:73429317-73429336 | None:intergenic | 45.0% | |
| GCATAGGAATCTTGGCATCA+AGG | - | chr3.4:73428669-73428688 | MS.gene29792:CDS | 45.0% | |
| GCCATAGTTCCAAGCATGTA+CGG | + | chr3.4:73428622-73428641 | None:intergenic | 45.0% | |
| GCTGTGATAGAGGAAGTTCA+GGG | + | chr3.4:73429247-73429266 | None:intergenic | 45.0% | |
| GTCCCAATTCCTTCTGTATG+CGG | - | chr3.4:73429316-73429335 | MS.gene29792:intron | 45.0% | |
| GTTTACTATGTGGGACCAAC+TGG | - | chr3.4:73432063-73432082 | MS.gene29792:intron | 45.0% | |
| TACATGCTTGGAACTATGGC+TGG | - | chr3.4:73428622-73428641 | MS.gene29792:intron | 45.0% | |
| TCACATGGAATCAACGTTGC+TGG | - | chr3.4:73427993-73428012 | MS.gene29792:CDS | 45.0% | |
| TCCGTACATGCTTGGAACTA+TGG | - | chr3.4:73428618-73428637 | MS.gene29792:intron | 45.0% | |
| TCGAGTACACCATAAGCGTA+TGG | + | chr3.4:73431271-73431290 | None:intergenic | 45.0% | |
| TCTGTTGGTACCATGATTGC+TGG | - | chr3.4:73431078-73431097 | MS.gene29792:intron | 45.0% | |
| TGCTCAAGCACACAATAGTG+TGG | - | chr3.4:73430436-73430455 | MS.gene29792:intron | 45.0% | |
| TGGTACCATGATTGCTGGAT+GGG | - | chr3.4:73431083-73431102 | MS.gene29792:intron | 45.0% | |
| TTCATCCCATCCAGCAATCA+TGG | + | chr3.4:73431091-73431110 | None:intergenic | 45.0% | |
| TTGGTACCATGATTGCTGGA+TGG | - | chr3.4:73431082-73431101 | MS.gene29792:intron | 45.0% | |
| ! | AGAGATGATGGCTGTGATAG+AGG | + | chr3.4:73429257-73429276 | None:intergenic | 45.0% |
| ! | GCTGATTCTCGTGCTAGTAT+GGG | - | chr3.4:73428441-73428460 | MS.gene29792:intron | 45.0% |
| ! | TCTGGTTCACCATACGCTTA+TGG | - | chr3.4:73431259-73431278 | MS.gene29792:intron | 45.0% |
| ! | TGAAAGTGTGGGACTTGCAT+GGG | + | chr3.4:73429435-73429454 | None:intergenic | 45.0% |
| ! | TTGAAAGTGTGGGACTTGCA+TGG | + | chr3.4:73429436-73429455 | None:intergenic | 45.0% |
| !! | GTGCTGCTGATTGCCAATTT+TGG | - | chr3.4:73428647-73428666 | MS.gene29792:intron | 45.0% |
| !! | TGCTGATTCTCGTGCTAGTA+TGG | - | chr3.4:73428440-73428459 | MS.gene29792:intron | 45.0% |
| !!! | CACCGAACACGTTTTGGTTT+TGG | + | chr3.4:73429077-73429096 | None:intergenic | 45.0% |
| AAGCTGGTCAATAGGGGAGA+AGG | + | chr3.4:73431493-73431512 | None:intergenic | 50.0% | |
| ACTATGTGGGACCAACTGGA+TGG | - | chr3.4:73432067-73432086 | MS.gene29792:intron | 50.0% | |
| AGCTGGTCAATAGGGGAGAA+GGG | + | chr3.4:73431492-73431511 | None:intergenic | 50.0% | |
| AGGCCGCATACAGAAGGAAT+TGG | + | chr3.4:73429322-73429341 | None:intergenic | 50.0% | |
| ATGCTTGGAACTATGGCTGG+AGG | - | chr3.4:73428625-73428644 | MS.gene29792:intron | 50.0% | |
| ATTGGGAAGCTGGAACGATG+GGG | + | chr3.4:73428033-73428052 | None:intergenic | 50.0% | |
| ATTTCTTGCTCCACGGTGCT+TGG | + | chr3.4:73432150-73432169 | None:intergenic | 50.0% | |
| CAAGAAATGGTTGAGGCAGC+TGG | - | chr3.4:73432162-73432181 | MS.gene29792:CDS | 50.0% | |
| CAGATGGTGAAACCCGCAAA+GGG | - | chr3.4:73428372-73428391 | MS.gene29792:intron | 50.0% | |
| CATCGTTGGAATTGGGAAGC+TGG | + | chr3.4:73428043-73428062 | None:intergenic | 50.0% | |
| CGTGGAGCAAGAAATGGTTG+AGG | - | chr3.4:73432155-73432174 | MS.gene29792:CDS | 50.0% | |
| CTGCAGCTTAGCCTGTGTTT+AGG | - | chr3.4:73428907-73428926 | MS.gene29792:CDS | 50.0% | |
| CTTATGGTGTACTCGACAGC+GGG | - | chr3.4:73431275-73431294 | MS.gene29792:intron | 50.0% | |
| GAATTGGGAAGCTGGAACGA+TGG | + | chr3.4:73428035-73428054 | None:intergenic | 50.0% | |
| GATTCTCGTGCTAGTATGGG+AGG | - | chr3.4:73428444-73428463 | MS.gene29792:intron | 50.0% | |
| GCAACCAGGCAAGATGCAAA+CGG | - | chr3.4:73430123-73430142 | MS.gene29792:intron | 50.0% | |
| GCTTATGGTGTACTCGACAG+CGG | - | chr3.4:73431274-73431293 | MS.gene29792:intron | 50.0% | |
| GGCCGCATACAGAAGGAATT+GGG | + | chr3.4:73429321-73429340 | None:intergenic | 50.0% | |
| GGCTGTGATAGAGGAAGTTC+AGG | + | chr3.4:73429248-73429267 | None:intergenic | 50.0% | |
| TACAGAAGGAATTGGGACGG+CGG | + | chr3.4:73429314-73429333 | None:intergenic | 50.0% | |
| TCAGATGGTGAAACCCGCAA+AGG | - | chr3.4:73428371-73428390 | MS.gene29792:intron | 50.0% | |
| TGGATTACAATGGCCTCCCT+TGG | + | chr3.4:73430416-73430435 | None:intergenic | 50.0% | |
| TGTTTGGCAAACTCCAAGGG+AGG | - | chr3.4:73430400-73430419 | MS.gene29792:intron | 50.0% | |
| TTCCAAAACCGCTGTGTCAC+TGG | - | chr3.4:73429895-73429914 | MS.gene29792:intron | 50.0% | |
| TTTCTTGCTCCACGGTGCTT+GGG | + | chr3.4:73432149-73432168 | None:intergenic | 50.0% | |
| ! | AAGCACCGTGGAGCAAGAAA+TGG | - | chr3.4:73432149-73432168 | MS.gene29792:CDS | 50.0% |
| ! | ACATTTCGTGATGGAGCCAG+TGG | - | chr3.4:73431444-73431463 | MS.gene29792:intron | 50.0% |
| ! | TCCACTTAAAGAGCGCAACC+AGG | - | chr3.4:73430109-73430128 | MS.gene29792:intron | 50.0% |
| !! | AAGCTTCTGAACTGGCTCGA+CGG | - | chr3.4:73431406-73431425 | MS.gene29792:intron | 50.0% |
| ACTGGCAGAGAGGAGAGAAG+TGG | - | chr3.4:73429913-73429932 | MS.gene29792:intron | 55.0% | |
| CGGGAATGATTCGAGAGCAG+TGG | + | chr3.4:73427964-73427983 | None:intergenic | 55.0% | |
| CTGGCAGAGAGGAGAGAAGT+GGG | - | chr3.4:73429914-73429933 | MS.gene29792:intron | 55.0% | |
| GCCTGGTTGCGCTCTTTAAG+TGG | + | chr3.4:73430113-73430132 | None:intergenic | 55.0% | |
| GTGAGTGAAAGGGACCCGAT+GGG | + | chr3.4:73429209-73429228 | None:intergenic | 55.0% | |
| TTCTTGCTCCACGGTGCTTG+GGG | + | chr3.4:73432148-73432167 | None:intergenic | 55.0% | |
| TTGGGAAGCTGGAACGATGG+GGG | + | chr3.4:73428032-73428051 | None:intergenic | 55.0% | |
| ! | TGCCAGTGACACAGCGGTTT+TGG | + | chr3.4:73429900-73429919 | None:intergenic | 55.0% |
| ! | TTTCGTGATGGAGCCAGTGG+TGG | - | chr3.4:73431447-73431466 | MS.gene29792:intron | 55.0% |
| !! | AGCTTCTGAACTGGCTCGAC+GGG | - | chr3.4:73431407-73431426 | MS.gene29792:intron | 55.0% |
| !! | GCAGTGTCGCTTGCATGAGT+TGG | - | chr3.4:73430975-73430994 | MS.gene29792:intron | 55.0% |
| ACCGCTAGCAACTCCACCAC+TGG | + | chr3.4:73431463-73431482 | None:intergenic | 60.0% | |
| CCTCTCTGCCAGTGACACAG+CGG | + | chr3.4:73429906-73429925 | None:intergenic | 60.0% | |
| GGTGAGTGAAAGGGACCCGA+TGG | + | chr3.4:73429210-73429229 | None:intergenic | 60.0% | |
| TCCACGGTGCTTGGGGTAAC+TGG | + | chr3.4:73432141-73432160 | None:intergenic | 60.0% | |
| ! | GCCAGTGGTGGAGTTGCTAG+CGG | - | chr3.4:73431459-73431478 | MS.gene29792:CDS | 60.0% |
| ! | TCCAGTTACCCCAAGCACCG+TGG | - | chr3.4:73432137-73432156 | MS.gene29792:CDS | 60.0% |
| ! | CCGCTGTGTCACTGGCAGAG+AGG | - | chr3.4:73429903-73429922 | MS.gene29792:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 73427948 | 73432191 | 73427948 | ID=MS.gene29792 |
| chr3.4 | mRNA | 73427948 | 73432191 | 73427948 | ID=MS.gene29792.t1;Parent=MS.gene29792 |
| chr3.4 | exon | 73432078 | 73432191 | 73432078 | ID=MS.gene29792.t1.exon1;Parent=MS.gene29792.t1 |
| chr3.4 | CDS | 73432078 | 73432191 | 73432078 | ID=cds.MS.gene29792.t1;Parent=MS.gene29792.t1 |
| chr3.4 | exon | 73431665 | 73431794 | 73431665 | ID=MS.gene29792.t1.exon2;Parent=MS.gene29792.t1 |
| chr3.4 | CDS | 73431665 | 73431794 | 73431665 | ID=cds.MS.gene29792.t1;Parent=MS.gene29792.t1 |
| chr3.4 | exon | 73431449 | 73431555 | 73431449 | ID=MS.gene29792.t1.exon3;Parent=MS.gene29792.t1 |
| chr3.4 | CDS | 73431449 | 73431555 | 73431449 | ID=cds.MS.gene29792.t1;Parent=MS.gene29792.t1 |
| chr3.4 | exon | 73429026 | 73429160 | 73429026 | ID=MS.gene29792.t1.exon4;Parent=MS.gene29792.t1 |
| chr3.4 | CDS | 73429026 | 73429160 | 73429026 | ID=cds.MS.gene29792.t1;Parent=MS.gene29792.t1 |
| chr3.4 | exon | 73428843 | 73428946 | 73428843 | ID=MS.gene29792.t1.exon5;Parent=MS.gene29792.t1 |
| chr3.4 | CDS | 73428843 | 73428946 | 73428843 | ID=cds.MS.gene29792.t1;Parent=MS.gene29792.t1 |
| chr3.4 | exon | 73428659 | 73428759 | 73428659 | ID=MS.gene29792.t1.exon6;Parent=MS.gene29792.t1 |
| chr3.4 | CDS | 73428659 | 73428759 | 73428659 | ID=cds.MS.gene29792.t1;Parent=MS.gene29792.t1 |
| chr3.4 | exon | 73427948 | 73428075 | 73427948 | ID=MS.gene29792.t1.exon7;Parent=MS.gene29792.t1 |
| chr3.4 | CDS | 73427948 | 73428075 | 73427948 | ID=cds.MS.gene29792.t1;Parent=MS.gene29792.t1 |
| Gene Sequence |
| Protein sequence |
