Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040231.t1 | XP_003622316.1 | 98.9 | 271 | 3 | 0 | 1 | 271 | 1 | 271 | 1.10E-151 | 545.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040231.t1 | Q7DLS1 | 84.8 | 270 | 39 | 1 | 4 | 271 | 5 | 274 | 7.4e-136 | 484.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040231.t1 | G7L695 | 98.9 | 271 | 3 | 0 | 1 | 271 | 1 | 271 | 8.1e-152 | 545.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040231.t1 | MTR_7g032930 | 98.893 | 271 | 3 | 0 | 1 | 271 | 1 | 271 | 0.0 | 554 |
| MS.gene040231.t1 | MTR_7g037830 | 97.048 | 271 | 8 | 0 | 1 | 271 | 1 | 271 | 0.0 | 548 |
| MS.gene040231.t1 | MTR_3g109210 | 31.282 | 195 | 131 | 2 | 24 | 217 | 1 | 193 | 1.48e-28 | 109 |
| MS.gene040231.t1 | MTR_3g089040 | 29.302 | 215 | 144 | 4 | 5 | 216 | 24 | 233 | 5.48e-18 | 81.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene040231.t1 | AT5G40580 | 84.815 | 270 | 39 | 1 | 4 | 271 | 5 | 274 | 4.47e-179 | 494 |
| MS.gene040231.t1 | AT5G40580 | 84.815 | 270 | 39 | 1 | 4 | 271 | 5 | 274 | 4.47e-179 | 494 |
| MS.gene040231.t1 | AT3G27430 | 84.387 | 269 | 41 | 1 | 4 | 271 | 5 | 273 | 2.07e-177 | 489 |
| MS.gene040231.t1 | AT5G40580 | 83.333 | 270 | 37 | 2 | 4 | 271 | 5 | 268 | 8.55e-173 | 478 |
| MS.gene040231.t1 | AT5G40580 | 83.333 | 270 | 37 | 2 | 4 | 271 | 5 | 268 | 8.55e-173 | 478 |
| MS.gene040231.t1 | AT3G27430 | 82.900 | 269 | 39 | 2 | 4 | 271 | 5 | 267 | 7.15e-171 | 473 |
| MS.gene040231.t1 | AT3G27430 | 86.066 | 244 | 34 | 0 | 4 | 247 | 5 | 248 | 5.55e-166 | 460 |
| MS.gene040231.t1 | AT4G31300 | 32.105 | 190 | 126 | 2 | 29 | 217 | 5 | 192 | 2.03e-28 | 108 |
| MS.gene040231.t1 | AT4G31300 | 32.105 | 190 | 126 | 2 | 29 | 217 | 5 | 192 | 2.03e-28 | 108 |
| MS.gene040231.t1 | AT4G31300 | 32.461 | 191 | 125 | 3 | 29 | 217 | 5 | 193 | 1.96e-27 | 106 |
| MS.gene040231.t1 | AT3G26340 | 31.527 | 203 | 135 | 3 | 14 | 213 | 32 | 233 | 8.81e-20 | 86.7 |
| MS.gene040231.t1 | AT1G13060 | 31.527 | 203 | 135 | 3 | 14 | 213 | 32 | 233 | 4.79e-19 | 84.7 |
| MS.gene040231.t1 | AT1G13060 | 28.194 | 227 | 135 | 4 | 14 | 213 | 32 | 257 | 4.22e-14 | 71.2 |
| MS.gene040231.t1 | AT1G13060 | 28.194 | 227 | 135 | 4 | 14 | 213 | 32 | 257 | 4.22e-14 | 71.2 |
| MS.gene040231.t1 | AT1G53850 | 25.381 | 197 | 137 | 4 | 35 | 223 | 31 | 225 | 2.15e-11 | 62.8 |
| MS.gene040231.t1 | AT1G53850 | 25.381 | 197 | 137 | 4 | 35 | 223 | 31 | 225 | 2.15e-11 | 62.8 |
Find 70 sgRNAs with CRISPR-Local
Find 372 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCAGGATGGTATCATTCT+TGG | 0.234558 | 7.1:+65028241 | MS.gene040231:intron |
| TTGTGAGAAAATTCATTATA+TGG | 0.247284 | 7.1:+65028309 | MS.gene040231:CDS |
| GTCTCAGCTGCATTAGTTCT+TGG | 0.249577 | 7.1:+65028719 | MS.gene040231:CDS |
| TTGACGAAAGTACGGGGATT+TGG | 0.267931 | 7.1:-65030627 | None:intergenic |
| CCATTTGCTACAATGGGATC+TGG | 0.384782 | 7.1:+65028906 | MS.gene040231:CDS |
| AACAAAGATTACTCCTTTGA+AGG | 0.392977 | 7.1:+65032977 | MS.gene040231:CDS |
| CTTGGTGGGGTTGACATCAC+TGG | 0.394539 | 7.1:+65028737 | MS.gene040231:CDS |
| CAGCTGCATTAGTTCTTGGT+GGG | 0.399091 | 7.1:+65028723 | MS.gene040231:CDS |
| ACCCTTCCATTTGCTACAAT+GGG | 0.407963 | 7.1:+65028900 | MS.gene040231:CDS |
| CTCTAGATTCTCTACCAGTA+TGG | 0.410287 | 7.1:-65028564 | None:intergenic |
| ATCAGCGACAATGGGTCCTT+CGG | 0.416864 | 7.1:-65028281 | None:intergenic |
| TTGGAGAATGTAAAGCCTCT+TGG | 0.424173 | 7.1:-65030651 | None:intergenic |
| TTCTGAAACTCAACTTGAAA+AGG | 0.426945 | 7.1:-65028618 | None:intergenic |
| GCTGATACAGAGGCTGTAAC+AGG | 0.429238 | 7.1:+65028367 | MS.gene040231:CDS |
| CCAGATCCCATTGTAGCAAA+TGG | 0.434181 | 7.1:-65028906 | None:intergenic |
| CACCCTTCCATTTGCTACAA+TGG | 0.440530 | 7.1:+65028899 | MS.gene040231:CDS |
| TCATTCTTGGAGCAGATACC+AGG | 0.440553 | 7.1:+65028254 | MS.gene040231:CDS |
| CAACTACATCGCTACCATAC+TGG | 0.441368 | 7.1:+65028550 | MS.gene040231:CDS |
| TGCTGGTATATTTAATGACT+TGG | 0.444353 | 7.1:+65030444 | MS.gene040231:CDS |
| ATATTTAATGACTTGGGAAG+TGG | 0.453974 | 7.1:+65030451 | MS.gene040231:CDS |
| AAGACAGGAACCACCATTGT+TGG | 0.458191 | 7.1:+65027605 | MS.gene040231:CDS |
| AGGGACATAAGGAATATCTA+AGG | 0.462529 | 7.1:+65030592 | MS.gene040231:intron |
| CTCTTGGATTGACGAAAGTA+CGG | 0.463690 | 7.1:-65030635 | None:intergenic |
| AAATGATATGCTCGAAAAGA+AGG | 0.466920 | 7.1:+65027559 | MS.gene040231:CDS |
| GATCTGGTGCAGAGAGATGA+AGG | 0.474218 | 7.1:+65030394 | MS.gene040231:intron |
| AACATATATTGTTGTGGAGC+AGG | 0.476690 | 7.1:+65028337 | MS.gene040231:CDS |
| ACTTCAACCTTCTCCTTCAA+AGG | 0.477866 | 7.1:-65032990 | None:intergenic |
| TCAGCTGCATTAGTTCTTGG+TGG | 0.479300 | 7.1:+65028722 | MS.gene040231:CDS |
| AATGGGTCCTTCGGTTGCCC+TGG | 0.483084 | 7.1:-65028272 | None:intergenic |
| GTCTGTCGATCTTCCTCCCA+AGG | 0.486942 | 7.1:+65027508 | MS.gene040231:CDS |
| GATTACTCCTTTGAAGGAGA+AGG | 0.487372 | 7.1:+65032983 | MS.gene040231:CDS |
| ATCAAAACTGAACCCACCCT+TGG | 0.488867 | 7.1:-65027525 | None:intergenic |
| TAATGCTGCACAGGGACATA+AGG | 0.493118 | 7.1:+65030581 | MS.gene040231:intron |
| GCCCCTACTTATTTGAAGAC+AGG | 0.500417 | 7.1:+65027590 | MS.gene040231:CDS |
| GTCGATCTTCCTCCCAAGGG+TGG | 0.500772 | 7.1:+65027512 | MS.gene040231:CDS |
| GTTCCTGTCTTCAAATAAGT+AGG | 0.504731 | 7.1:-65027593 | None:intergenic |
| TTCCTGTCTTCAAATAAGTA+GGG | 0.522396 | 7.1:-65027592 | None:intergenic |
| TCTTGGATTGACGAAAGTAC+GGG | 0.526036 | 7.1:-65030634 | None:intergenic |
| GAACTAACAGTATGCAAATG+AGG | 0.526164 | 7.1:-65028761 | None:intergenic |
| AGCTGCATTAGTTCTTGGTG+GGG | 0.528922 | 7.1:+65028724 | MS.gene040231:CDS |
| GCTCCACAACAATATATGTT+GGG | 0.530455 | 7.1:-65028334 | None:intergenic |
| AGTAATTGAAGCAGATGCTA+TGG | 0.538109 | 7.1:+65033010 | MS.gene040231:CDS |
| TCAAAACTGAACCCACCCTT+GGG | 0.540612 | 7.1:-65027524 | None:intergenic |
| TCGATCTTCCTCCCAAGGGT+GGG | 0.551349 | 7.1:+65027513 | MS.gene040231:CDS |
| AGGCACTGCTGCTGATACAG+AGG | 0.563322 | 7.1:+65028357 | MS.gene040231:CDS |
| GTTGTTGAGTCGATATGTGC+TGG | 0.563519 | 7.1:+65030427 | MS.gene040231:CDS |
| ATCCCATTGTAGCAAATGGA+AGG | 0.564159 | 7.1:-65028902 | None:intergenic |
| TGCTCCACAACAATATATGT+TGG | 0.572528 | 7.1:-65028335 | None:intergenic |
| TCCTGTCTTCAAATAAGTAG+GGG | 0.589880 | 7.1:-65027591 | None:intergenic |
| TGTATTTGAGTCTAAATACA+AGG | 0.590364 | 7.1:+65028947 | MS.gene040231:CDS |
| GCTGGTATATTTAATGACTT+GGG | 0.600543 | 7.1:+65030445 | MS.gene040231:CDS |
| TTAAACATCTGCAGTTACCA+AGG | 0.603702 | 7.1:+65028692 | MS.gene040231:intron |
| AATGATATGCTCGAAAAGAA+GGG | 0.604225 | 7.1:+65027560 | MS.gene040231:CDS |
| TCCCATTGTAGCAAATGGAA+GGG | 0.616474 | 7.1:-65028901 | None:intergenic |
| AAGTACGGGGATTTGGCGTG+AGG | 0.621137 | 7.1:-65030620 | None:intergenic |
| CTGGAAAACTAAACCAACAA+TGG | 0.623311 | 7.1:-65027618 | None:intergenic |
| GCACCCAACATATATTGTTG+TGG | 0.626948 | 7.1:+65028331 | MS.gene040231:CDS |
| TGTAGCAAATGGAAGGGTGT+CGG | 0.633335 | 7.1:-65028895 | None:intergenic |
| CGTACTTTCGTCAATCCAAG+AGG | 0.636115 | 7.1:+65030636 | MS.gene040231:CDS |
| AAACTGAACCCACCCTTGGG+AGG | 0.638200 | 7.1:-65027521 | None:intergenic |
| GAAAACTAAACCAACAATGG+TGG | 0.640949 | 7.1:-65027615 | None:intergenic |
| CTTGGATTGACGAAAGTACG+GGG | 0.645114 | 7.1:-65030633 | None:intergenic |
| TCTGTCGATCTTCCTCCCAA+GGG | 0.651994 | 7.1:+65027509 | MS.gene040231:CDS |
| GCAGATACCAGGGCAACCGA+AGG | 0.657427 | 7.1:+65028265 | MS.gene040231:CDS |
| CATTCTTGGAGCAGATACCA+GGG | 0.666431 | 7.1:+65028255 | MS.gene040231:CDS |
| ATGCAGCTGAGACATGACCT+TGG | 0.674625 | 7.1:-65028709 | None:intergenic |
| GATTTGCAGATCTATCCACA+TGG | 0.686562 | 7.1:+65028867 | MS.gene040231:intron |
| ATTTGCAGATCTATCCACAT+GGG | 0.690852 | 7.1:+65028868 | MS.gene040231:intron |
| TGATGTTTGTGTGATAACCA+AGG | 0.711392 | 7.1:+65030483 | MS.gene040231:CDS |
| AGGGTGTCGGTTGACCCATG+TGG | 0.717575 | 7.1:-65028882 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATAATAATTAAAATAA+TGG | + | chr7.1:65031041-65031060 | MS.gene040231:intron | 0.0% |
| !! | AATCAAACTTTAAATATTAA+AGG | - | chr7.1:65028801-65028820 | None:intergenic | 10.0% |
| !! | TTTACTAAATAAAAATTGAA+AGG | + | chr7.1:65031392-65031411 | MS.gene040231:intron | 10.0% |
| !!! | ATATTTAAAGTTTGATTATT+TGG | + | chr7.1:65028804-65028823 | MS.gene040231:intron | 10.0% |
| !!! | GAAAAATTATATTTGTTAAA+AGG | + | chr7.1:65032144-65032163 | MS.gene040231:intron | 10.0% |
| !!! | TTCAATTTTTATTTAGTAAA+GGG | - | chr7.1:65031392-65031411 | None:intergenic | 10.0% |
| !!! | TTTCAATTTTTATTTAGTAA+AGG | - | chr7.1:65031393-65031412 | None:intergenic | 10.0% |
| !! | ATATTATTATTATATGCTTG+TGG | + | chr7.1:65031114-65031133 | MS.gene040231:intron | 15.0% |
| !! | ATTATGTTTAAGAATAACTA+GGG | - | chr7.1:65029274-65029293 | None:intergenic | 15.0% |
| !! | GTTATTATTATGATAAAGAA+GGG | + | chr7.1:65027982-65028001 | MS.gene040231:intron | 15.0% |
| !! | TAAATAAAAATTGAAAGGAA+AGG | + | chr7.1:65031397-65031416 | MS.gene040231:intron | 15.0% |
| !! | TGTTATTATTATGATAAAGA+AGG | + | chr7.1:65027981-65028000 | MS.gene040231:intron | 15.0% |
| !! | TTATTATTATGATAAAGAAG+GGG | + | chr7.1:65027983-65028002 | MS.gene040231:intron | 15.0% |
| !! | TTTACTAAGTAAAAATTGAA+AGG | + | chr7.1:65031574-65031593 | MS.gene040231:intron | 15.0% |
| !!! | TTTTGCTAATAAAATGTTTA+GGG | + | chr7.1:65030951-65030970 | MS.gene040231:intron | 15.0% |
| !!! | TTTTTGCTAATAAAATGTTT+AGG | + | chr7.1:65030950-65030969 | MS.gene040231:intron | 15.0% |
| !! | AAAATAAATGCTTCAAAGAA+TGG | - | chr7.1:65027688-65027707 | None:intergenic | 20.0% |
| !! | AAAATGTATGAAAGCAATAT+TGG | - | chr7.1:65031002-65031021 | None:intergenic | 20.0% |
| !! | AACAAAATGCTATAGTTAAT+TGG | - | chr7.1:65032406-65032425 | None:intergenic | 20.0% |
| !! | AAGTGTAAGTAAACATATTA+AGG | + | chr7.1:65028977-65028996 | MS.gene040231:intron | 20.0% |
| !! | AATGTTGGATAATTAGAATT+TGG | + | chr7.1:65032208-65032227 | MS.gene040231:intron | 20.0% |
| !! | ATGAATTAATTCCTACATAA+AGG | + | chr7.1:65031961-65031980 | MS.gene040231:intron | 20.0% |
| !! | CATATAAACAGATATAGATA+AGG | + | chr7.1:65031881-65031900 | MS.gene040231:intron | 20.0% |
| !! | GAAAAGAAACAGATATATAT+GGG | + | chr7.1:65029869-65029888 | MS.gene040231:intron | 20.0% |
| !! | GATTATGTTTAAGAATAACT+AGG | - | chr7.1:65029275-65029294 | None:intergenic | 20.0% |
| !! | GTAAAAAAGAAATCAGTAAA+AGG | - | chr7.1:65028063-65028082 | None:intergenic | 20.0% |
| !! | TATTATCAAGGATACAAAAT+TGG | - | chr7.1:65031759-65031778 | None:intergenic | 20.0% |
| !! | TATTATTATGATAAAGAAGG+GGG | + | chr7.1:65027984-65028003 | MS.gene040231:intron | 20.0% |
| !! | TGAAAAGAAACAGATATATA+TGG | + | chr7.1:65029868-65029887 | MS.gene040231:intron | 20.0% |
| !! | TTGTGAGAAAATTCATTATA+TGG | + | chr7.1:65028309-65028328 | MS.gene040231:CDS | 20.0% |
| !!! | AACAAATATCTCATTTTCAA+TGG | - | chr7.1:65028496-65028515 | None:intergenic | 20.0% |
| !!! | ATATACAATTGTTATTGTTC+TGG | - | chr7.1:65032045-65032064 | None:intergenic | 20.0% |
| !!! | GTTTAATTTGTCAAGTTTTT+TGG | + | chr7.1:65028190-65028209 | MS.gene040231:intron | 20.0% |
| !!! | TATACAATTGTTATTGTTCT+GGG | - | chr7.1:65032044-65032063 | None:intergenic | 20.0% |
| !!! | TATTTGTTAAAAGGAAAATG+AGG | + | chr7.1:65032153-65032172 | MS.gene040231:intron | 20.0% |
| !!! | TTAAGTTTTAGATATAGATC+AGG | + | chr7.1:65032013-65032032 | MS.gene040231:intron | 20.0% |
| !!! | TTGTAAGTTAAGTTAATTTG+TGG | + | chr7.1:65027887-65027906 | MS.gene040231:intron | 20.0% |
| !!! | TTTCATCATTGTTTGATTTA+TGG | - | chr7.1:65029853-65029872 | None:intergenic | 20.0% |
| ! | AAAAAGAAATCAGTAAAAGG+AGG | - | chr7.1:65028060-65028079 | None:intergenic | 25.0% |
| ! | AAACAATTATTATTCAGACC+TGG | - | chr7.1:65027640-65027659 | None:intergenic | 25.0% |
| ! | AAGACACAATTTACTAAAGA+GGG | + | chr7.1:65031193-65031212 | MS.gene040231:intron | 25.0% |
| ! | AAGTAAAAATTGAAAGGAGA+TGG | + | chr7.1:65031580-65031599 | MS.gene040231:intron | 25.0% |
| ! | AAGTCTAATGTATATCATCT+AGG | - | chr7.1:65032804-65032823 | None:intergenic | 25.0% |
| ! | AATAGCTTCATAAAGGAATT+TGG | - | chr7.1:65032576-65032595 | None:intergenic | 25.0% |
| ! | ATAAAAGACTCATCAACATA+TGG | - | chr7.1:65032774-65032793 | None:intergenic | 25.0% |
| ! | ATAAGGATAATAGAATGAGT+AGG | + | chr7.1:65031898-65031917 | MS.gene040231:intron | 25.0% |
| ! | ATATACAAAATTGTACCTTC+TGG | + | chr7.1:65028095-65028114 | MS.gene040231:intron | 25.0% |
| ! | ATATACATTAGACTTTCAGA+AGG | + | chr7.1:65032809-65032828 | MS.gene040231:intron | 25.0% |
| ! | ATTAATTCCTACATAAAGGT+TGG | + | chr7.1:65031965-65031984 | MS.gene040231:intron | 25.0% |
| ! | CCTGAAGAAAATTTATTTGT+GGG | - | chr7.1:65028228-65028247 | None:intergenic | 25.0% |
| ! | GAAACAAAATAGCTTCATAA+AGG | - | chr7.1:65032583-65032602 | None:intergenic | 25.0% |
| ! | GTTATTAATTATTGCAGACA+TGG | + | chr7.1:65028513-65028532 | MS.gene040231:intron | 25.0% |
| ! | TAAGGATAATAGAATGAGTA+GGG | + | chr7.1:65031899-65031918 | MS.gene040231:intron | 25.0% |
| ! | TACAACAACAATAAATGCAA+AGG | - | chr7.1:65029932-65029951 | None:intergenic | 25.0% |
| ! | TAGGTATAATTAGTAGAGAT+TGG | + | chr7.1:65029892-65029911 | MS.gene040231:intron | 25.0% |
| ! | TCCTGAAGAAAATTTATTTG+TGG | - | chr7.1:65028229-65028248 | None:intergenic | 25.0% |
| ! | TGGTTTATATTGAATTGGAT+TGG | - | chr7.1:65029804-65029823 | None:intergenic | 25.0% |
| ! | TGTATTTGAGTCTAAATACA+AGG | + | chr7.1:65028947-65028966 | MS.gene040231:CDS | 25.0% |
| ! | TGTCGAGGAAATTAATATAA+GGG | + | chr7.1:65031504-65031523 | MS.gene040231:intron | 25.0% |
| ! | TTAATTCCTACATAAAGGTT+GGG | + | chr7.1:65031966-65031985 | MS.gene040231:intron | 25.0% |
| ! | TTATTATTATATGCTTGTCG+AGG | + | chr7.1:65031489-65031508 | MS.gene040231:intron | 25.0% |
| ! | TTATTATTATATGCTTGTGG+AGG | + | chr7.1:65031117-65031136 | MS.gene040231:intron | 25.0% |
| ! | TTGGAATAATGACATTAGAT+AGG | - | chr7.1:65030075-65030094 | None:intergenic | 25.0% |
| ! | TTGTCGAGGAAATTAATATA+AGG | + | chr7.1:65031503-65031522 | MS.gene040231:intron | 25.0% |
| ! | TTGTTGGAAAGAAAAAGATT+TGG | + | chr7.1:65031936-65031955 | MS.gene040231:intron | 25.0% |
| ! | TTTAATCACTATCAGGTTAT+GGG | - | chr7.1:65029493-65029512 | None:intergenic | 25.0% |
| !! | ACTATCTCTGTAACATTTTA+TGG | - | chr7.1:65030726-65030745 | None:intergenic | 25.0% |
| !! | ATACAATTGTTATTGTTCTG+GGG | - | chr7.1:65032043-65032062 | None:intergenic | 25.0% |
| !! | ATCTTTTTCTTTCCAACAAT+AGG | - | chr7.1:65031935-65031954 | None:intergenic | 25.0% |
| !! | CAAATAAATTTTCTTCAGGA+TGG | + | chr7.1:65028229-65028248 | MS.gene040231:intron | 25.0% |
| !! | TAATAAAATGTTTAGGGTGA+GGG | + | chr7.1:65030957-65030976 | MS.gene040231:intron | 25.0% |
| !! | TATACGTCAGAATTTTCAAA+AGG | - | chr7.1:65032916-65032935 | None:intergenic | 25.0% |
| !! | TATTGTTGTTGTAAACTATG+TGG | + | chr7.1:65029939-65029958 | MS.gene040231:intron | 25.0% |
| !! | TTATTTGGAATTCATACAGT+TGG | + | chr7.1:65028819-65028838 | MS.gene040231:intron | 25.0% |
| !!! | ACTGACTTTTATCGATAATA+TGG | + | chr7.1:65029154-65029173 | MS.gene040231:intron | 25.0% |
| !!! | AGTTAAGTTAATTTGTGGTA+AGG | + | chr7.1:65027892-65027911 | MS.gene040231:intron | 25.0% |
| !!! | ATGTAGCTTTGTGTATTATT+TGG | - | chr7.1:65032607-65032626 | None:intergenic | 25.0% |
| !!! | GGTATTTTTTGAGTAAGTAA+TGG | + | chr7.1:65032087-65032106 | MS.gene040231:intron | 25.0% |
| !!! | GGTTTGTTATTTTTATTGTG+TGG | + | chr7.1:65027828-65027847 | MS.gene040231:intron | 25.0% |
| !!! | TGATTCATTTTGACATGTTA+TGG | + | chr7.1:65032066-65032085 | MS.gene040231:intron | 25.0% |
| !!! | TTGCTATAAACATTTTGATC+TGG | + | chr7.1:65030378-65030397 | MS.gene040231:intron | 25.0% |
| AAAACCGACACAATAATATG+AGG | + | chr7.1:65029393-65029412 | MS.gene040231:intron | 30.0% | |
| AAATAAACATGCAGAAGAGT+CGG | - | chr7.1:65032851-65032870 | None:intergenic | 30.0% | |
| AAATGATATGCTCGAAAAGA+AGG | + | chr7.1:65027559-65027578 | MS.gene040231:CDS | 30.0% | |
| AACAAAGATTACTCCTTTGA+AGG | + | chr7.1:65032977-65032996 | MS.gene040231:CDS | 30.0% | |
| AACAACACTTTGTACCATAA+GGG | - | chr7.1:65030785-65030804 | None:intergenic | 30.0% | |
| AAGCTCTCTAATTCATTGTA+GGG | - | chr7.1:65029240-65029259 | None:intergenic | 30.0% | |
| AAGGATAATAGAATGAGTAG+GGG | + | chr7.1:65031900-65031919 | MS.gene040231:intron | 30.0% | |
| AATGATATGCTCGAAAAGAA+GGG | + | chr7.1:65027560-65027579 | MS.gene040231:CDS | 30.0% | |
| AATTATAGTGTATTTCCTCC+AGG | - | chr7.1:65030286-65030305 | None:intergenic | 30.0% | |
| ACAAAGCTACATAACATGTT+GGG | + | chr7.1:65032615-65032634 | MS.gene040231:intron | 30.0% | |
| ACTCGAACTCAAATTTATGA+AGG | - | chr7.1:65028036-65028055 | None:intergenic | 30.0% | |
| AGAAACAGATATATATGGGT+AGG | + | chr7.1:65029873-65029892 | MS.gene040231:intron | 30.0% | |
| AGTAGTTTAAGAAGTCTCAA+GGG | - | chr7.1:65029972-65029991 | None:intergenic | 30.0% | |
| ATACTGTTTAATCAGCAAGA+AGG | - | chr7.1:65032883-65032902 | None:intergenic | 30.0% | |
| ATGACAAAATCCTTTAATGG+CGG | + | chr7.1:65029632-65029651 | MS.gene040231:intron | 30.0% | |
| ATGTTTAAGAATAACTAGGG+AGG | - | chr7.1:65029271-65029290 | None:intergenic | 30.0% | |
| ATTAATATAAGGGGTAGTCT+TGG | + | chr7.1:65031514-65031533 | MS.gene040231:intron | 30.0% | |
| ATTGTTGTAATTGATGCTGA+TGG | + | chr7.1:65030303-65030322 | MS.gene040231:intron | 30.0% | |
| CAAGACACAATTTACTAAAG+AGG | + | chr7.1:65031192-65031211 | MS.gene040231:intron | 30.0% | |
| CAAGCTTTCCTATAGTTAAT+TGG | - | chr7.1:65032354-65032373 | None:intergenic | 30.0% | |
| CACATTGTTTAATCACTATC+AGG | - | chr7.1:65029500-65029519 | None:intergenic | 30.0% | |
| CCAATGACAAAATCCTTTAA+TGG | + | chr7.1:65029629-65029648 | MS.gene040231:intron | 30.0% | |
| CTCTTTAGTAAATTGTGTCT+TGG | - | chr7.1:65031194-65031213 | None:intergenic | 30.0% | |
| GCTGGTATATTTAATGACTT+GGG | + | chr7.1:65030445-65030464 | MS.gene040231:CDS | 30.0% | |
| GGAGATGAAGAAAAAATAAG+TGG | + | chr7.1:65031652-65031671 | MS.gene040231:intron | 30.0% | |
| GGTTGTGGTTTATATTGAAT+TGG | - | chr7.1:65029809-65029828 | None:intergenic | 30.0% | |
| GTCGAGGAAATTAATATAAG+GGG | + | chr7.1:65031505-65031524 | MS.gene040231:intron | 30.0% | |
| GTGTTAAAATACAACTTCGT+GGG | - | chr7.1:65031254-65031273 | None:intergenic | 30.0% | |
| GTTTAATCACTATCAGGTTA+TGG | - | chr7.1:65029494-65029513 | None:intergenic | 30.0% | |
| TAAACTTTACAGTCAGTGTT+TGG | - | chr7.1:65027774-65027793 | None:intergenic | 30.0% | |
| TAACAACACTTTGTACCATA+AGG | - | chr7.1:65030786-65030805 | None:intergenic | 30.0% | |
| TAATTCCTACATAAAGGTTG+GGG | + | chr7.1:65031967-65031986 | MS.gene040231:intron | 30.0% | |
| TACTGTTTAATCAGCAAGAA+GGG | - | chr7.1:65032882-65032901 | None:intergenic | 30.0% | |
| TAGTAGTTTAAGAAGTCTCA+AGG | - | chr7.1:65029973-65029992 | None:intergenic | 30.0% | |
| TCAAAACATAGTCTCTTAGT+GGG | - | chr7.1:65032280-65032299 | None:intergenic | 30.0% | |
| TCTACATTAAGTACCACTAA+GGG | + | chr7.1:65030139-65030158 | MS.gene040231:intron | 30.0% | |
| TCTCTATGAAAGTTTGCATA+TGG | + | chr7.1:65028434-65028453 | MS.gene040231:intron | 30.0% | |
| TGCTGGTATATTTAATGACT+TGG | + | chr7.1:65030444-65030463 | MS.gene040231:CDS | 30.0% | |
| TGTAGCTAATTAACACTTCT+CGG | + | chr7.1:65031325-65031344 | MS.gene040231:intron | 30.0% | |
| TGTGGAGGAAATCAAAATAA+GGG | + | chr7.1:65031132-65031151 | MS.gene040231:intron | 30.0% | |
| TGTGTTAAAATACAACTTCG+TGG | - | chr7.1:65031255-65031274 | None:intergenic | 30.0% | |
| TGTTTAAGAATAACTAGGGA+GGG | - | chr7.1:65029270-65029289 | None:intergenic | 30.0% | |
| TTACTTAGTAAATTGTGTCC+TGG | - | chr7.1:65031566-65031585 | None:intergenic | 30.0% | |
| TTCCTGTCTTCAAATAAGTA+GGG | - | chr7.1:65027595-65027614 | None:intergenic | 30.0% | |
| TTGTGGAGGAAATCAAAATA+AGG | + | chr7.1:65031131-65031150 | MS.gene040231:intron | 30.0% | |
| TTTACATTCTCCAAAAAGAC+TGG | + | chr7.1:65030660-65030679 | MS.gene040231:CDS | 30.0% | |
| TTTATCATGAGTTCATGAAG+CGG | + | chr7.1:65027726-65027745 | MS.gene040231:intron | 30.0% | |
| TTTGTGTTTATCTGTTACAG+AGG | + | chr7.1:65032947-65032966 | MS.gene040231:intron | 30.0% | |
| ! | ACAATTTTTATCAGCGACAA+TGG | - | chr7.1:65028293-65028312 | None:intergenic | 30.0% |
| ! | AGTGAACATTTTGAATTGGA+TGG | - | chr7.1:65029095-65029114 | None:intergenic | 30.0% |
| ! | ATATTTAATGACTTGGGAAG+TGG | + | chr7.1:65030451-65030470 | MS.gene040231:CDS | 30.0% |
| ! | CAATTTTTATCAGCGACAAT+GGG | - | chr7.1:65028292-65028311 | None:intergenic | 30.0% |
| ! | CCATTAAAGGATTTTGTCAT+TGG | - | chr7.1:65029632-65029651 | None:intergenic | 30.0% |
| ! | CCCACAAATAAATTTTCTTC+AGG | + | chr7.1:65028225-65028244 | MS.gene040231:intron | 30.0% |
| ! | CTAATAAAATGTTTAGGGTG+AGG | + | chr7.1:65030956-65030975 | MS.gene040231:intron | 30.0% |
| ! | GTACAGTGAACATTTTGAAT+TGG | - | chr7.1:65029099-65029118 | None:intergenic | 30.0% |
| ! | GTATAGGAGAAGAGAATTTT+AGG | + | chr7.1:65030909-65030928 | MS.gene040231:intron | 30.0% |
| ! | GTGAACATTTTGAATTGGAT+GGG | - | chr7.1:65029094-65029113 | None:intergenic | 30.0% |
| ! | TTAAGGTAAATTAGCCTCAT+CGG | - | chr7.1:65032751-65032770 | None:intergenic | 30.0% |
| ! | TTCTTGCTGATTAAACAGTA+TGG | + | chr7.1:65032882-65032901 | MS.gene040231:intron | 30.0% |
| ! | TTGTTTGATTTATGGCTTCT+AGG | - | chr7.1:65029845-65029864 | None:intergenic | 30.0% |
| ! | TTTTATTGTGTGGCATTCTA+GGG | + | chr7.1:65027838-65027857 | MS.gene040231:intron | 30.0% |
| ! | TTTTCTATACAGCACAATGT+GGG | - | chr7.1:65029057-65029076 | None:intergenic | 30.0% |
| ! | TTTTTATTGTGTGGCATTCT+AGG | + | chr7.1:65027837-65027856 | MS.gene040231:intron | 30.0% |
| !! | AACTCATTTTTCTGCATTCT+CGG | + | chr7.1:65029713-65029732 | MS.gene040231:intron | 30.0% |
| !! | TAAGTTAATTTGTGGTAAGG+AGG | + | chr7.1:65027895-65027914 | MS.gene040231:intron | 30.0% |
| !! | TACAAAGTGTTGTTAAACAG+AGG | + | chr7.1:65030791-65030810 | MS.gene040231:intron | 30.0% |
| !! | TTCTGAAACTCAACTTGAAA+AGG | - | chr7.1:65028621-65028640 | None:intergenic | 30.0% |
| !!! | ACCTTTATTCCAGTTTTTTG+CGG | + | chr7.1:65031286-65031305 | MS.gene040231:intron | 30.0% |
| AAATAATCACCCTGTTCTCT+AGG | + | chr7.1:65029440-65029459 | MS.gene040231:intron | 35.0% | |
| AACAACCAACACACAGATTA+AGG | - | chr7.1:65030244-65030263 | None:intergenic | 35.0% | |
| AACACACAGATTAAGGATGT+TGG | - | chr7.1:65030237-65030256 | None:intergenic | 35.0% | |
| AACATATATTGTTGTGGAGC+AGG | + | chr7.1:65028337-65028356 | MS.gene040231:CDS | 35.0% | |
| AACATCCTTAATCTGTGTGT+TGG | + | chr7.1:65030236-65030255 | MS.gene040231:intron | 35.0% | |
| AAGGAAAGGAAGAAACTTCT+AGG | + | chr7.1:65031411-65031430 | MS.gene040231:intron | 35.0% | |
| AATTCCTACATAAAGGTTGG+GGG | + | chr7.1:65031968-65031987 | MS.gene040231:intron | 35.0% | |
| ACTGTACTTCTGTTAGAAAC+TGG | + | chr7.1:65029112-65029131 | MS.gene040231:intron | 35.0% | |
| ACTTAACACGTCAAGCTATA+AGG | - | chr7.1:65032185-65032204 | None:intergenic | 35.0% | |
| AGAGAACAGGGTGATTATTT+GGG | - | chr7.1:65029440-65029459 | None:intergenic | 35.0% | |
| AGAGAACTAGAAAGCAAAAG+TGG | + | chr7.1:65031625-65031644 | MS.gene040231:intron | 35.0% | |
| AGGATAATAGAATGAGTAGG+GGG | + | chr7.1:65031901-65031920 | MS.gene040231:intron | 35.0% | |
| AGGGAACTAGAAATCAAAAG+TGG | + | chr7.1:65031440-65031459 | MS.gene040231:intron | 35.0% | |
| AGGGACATAAGGAATATCTA+AGG | + | chr7.1:65030592-65030611 | MS.gene040231:intron | 35.0% | |
| AGTAATTGAAGCAGATGCTA+TGG | + | chr7.1:65033010-65033029 | MS.gene040231:CDS | 35.0% | |
| AGTGAAACATGAGAATTTCC+TGG | + | chr7.1:65029524-65029543 | MS.gene040231:intron | 35.0% | |
| ATCAAAATAAGGGGTAGTCA+TGG | + | chr7.1:65031142-65031161 | MS.gene040231:intron | 35.0% | |
| ATGAGATGTGCACAATTTGA+TGG | - | chr7.1:65032500-65032519 | None:intergenic | 35.0% | |
| ATTATGATAAAGAAGGGGGT+CGG | + | chr7.1:65027988-65028007 | MS.gene040231:intron | 35.0% | |
| ATTTCGCTTGTCTTGAATCA+TGG | - | chr7.1:65030109-65030128 | None:intergenic | 35.0% | |
| ATTTGCAGATCTATCCACAT+GGG | + | chr7.1:65028868-65028887 | MS.gene040231:intron | 35.0% | |
| CAAGCTCTCTAATTCATTGT+AGG | - | chr7.1:65029241-65029260 | None:intergenic | 35.0% | |
| CACAAAGCTACATAACATGT+TGG | + | chr7.1:65032614-65032633 | MS.gene040231:intron | 35.0% | |
| CAGACCTCATATTATTGTGT+CGG | - | chr7.1:65029400-65029419 | None:intergenic | 35.0% | |
| CTCTACATTAAGTACCACTA+AGG | + | chr7.1:65030138-65030157 | MS.gene040231:intron | 35.0% | |
| CTCTATAGTGACTTGAAACA+TGG | + | chr7.1:65027807-65027826 | MS.gene040231:intron | 35.0% | |
| CTGGAAAACTAAACCAACAA+TGG | - | chr7.1:65027621-65027640 | None:intergenic | 35.0% | |
| CTTAGTGGTACTTAATGTAG+AGG | - | chr7.1:65030140-65030159 | None:intergenic | 35.0% | |
| GAAAACTAAACCAACAATGG+TGG | - | chr7.1:65027618-65027637 | None:intergenic | 35.0% | |
| GAAACTGCAATGGAAAAACT+AGG | - | chr7.1:65030869-65030888 | None:intergenic | 35.0% | |
| GAACACAATACATTTGACAG+AGG | - | chr7.1:65030007-65030026 | None:intergenic | 35.0% | |
| GAACTAACAGTATGCAAATG+AGG | - | chr7.1:65028764-65028783 | None:intergenic | 35.0% | |
| GACGTGTTAAGTATGAATGT+TGG | + | chr7.1:65032193-65032212 | MS.gene040231:intron | 35.0% | |
| GACTCATCAACATATGGTTA+AGG | - | chr7.1:65032768-65032787 | None:intergenic | 35.0% | |
| GCTCCACAACAATATATGTT+GGG | - | chr7.1:65028337-65028356 | None:intergenic | 35.0% | |
| GGGTTAAGAGGTTATTATCA+AGG | - | chr7.1:65031771-65031790 | None:intergenic | 35.0% | |
| GTAGCTAATTAACACTTCTC+GGG | + | chr7.1:65031326-65031345 | MS.gene040231:intron | 35.0% | |
| GTCAAAACATAGTCTCTTAG+TGG | - | chr7.1:65032281-65032300 | None:intergenic | 35.0% | |
| GTGGAGGAAATCAAAATAAG+GGG | + | chr7.1:65031133-65031152 | MS.gene040231:intron | 35.0% | |
| GTTCCTGTCTTCAAATAAGT+AGG | - | chr7.1:65027596-65027615 | None:intergenic | 35.0% | |
| GTTGTTAGACCACATATCAA+TGG | - | chr7.1:65029759-65029778 | None:intergenic | 35.0% | |
| GTTGTTGTAAACTATGTGGA+AGG | + | chr7.1:65029943-65029962 | MS.gene040231:intron | 35.0% | |
| TAGACCACATATCAATGGAA+AGG | - | chr7.1:65029754-65029773 | None:intergenic | 35.0% | |
| TAGAGAACAGGGTGATTATT+TGG | - | chr7.1:65029441-65029460 | None:intergenic | 35.0% | |
| TCAGAATCAGTGTACATACA+AGG | - | chr7.1:65028667-65028686 | None:intergenic | 35.0% | |
| TCCTGTCTTCAAATAAGTAG+GGG | - | chr7.1:65027594-65027613 | None:intergenic | 35.0% | |
| TGACATTAGATAGGTCTAGT+AGG | - | chr7.1:65030066-65030085 | None:intergenic | 35.0% | |
| TGATGTTTGTGTGATAACCA+AGG | + | chr7.1:65030483-65030502 | MS.gene040231:CDS | 35.0% | |
| TGATTTATGGCTTCTAGGTT+TGG | - | chr7.1:65029840-65029859 | None:intergenic | 35.0% | |
| TGCTCCACAACAATATATGT+TGG | - | chr7.1:65028338-65028357 | None:intergenic | 35.0% | |
| TGGATACAAACACTCCTAAT+TGG | - | chr7.1:65029784-65029803 | None:intergenic | 35.0% | |
| TGGTCTAACAACTTCCAATT+AGG | + | chr7.1:65029767-65029786 | MS.gene040231:intron | 35.0% | |
| TTAAACATCTGCAGTTACCA+AGG | + | chr7.1:65028692-65028711 | MS.gene040231:intron | 35.0% | |
| TTATCATGAGTTCATGAAGC+GGG | + | chr7.1:65027727-65027746 | MS.gene040231:intron | 35.0% | |
| TTTCGCTTGTCTTGAATCAT+GGG | - | chr7.1:65030108-65030127 | None:intergenic | 35.0% | |
| TTTGCATATGGATAGTCTCT+AGG | + | chr7.1:65028446-65028465 | MS.gene040231:intron | 35.0% | |
| ! | AACATTTTATGGCAGTCTCA+AGG | - | chr7.1:65030715-65030734 | None:intergenic | 35.0% |
| ! | AATCATGGGAAGGGTAATTT+TGG | - | chr7.1:65030094-65030113 | None:intergenic | 35.0% |
| ! | ACATTTTATGGCAGTCTCAA+GGG | - | chr7.1:65030714-65030733 | None:intergenic | 35.0% |
| ! | AGTTTTTCCATTGCAGTTTC+TGG | + | chr7.1:65030869-65030888 | MS.gene040231:intron | 35.0% |
| ! | CTTTTCTATACAGCACAATG+TGG | - | chr7.1:65029058-65029077 | None:intergenic | 35.0% |
| ! | GTCAGTTTGCTTTAGTAACT+TGG | - | chr7.1:65029140-65029159 | None:intergenic | 35.0% |
| ! | TAAGGTAAATTAGCCTCATC+GGG | - | chr7.1:65032750-65032769 | None:intergenic | 35.0% |
| ! | TCAGAACAAACCAGTCTTTT+TGG | - | chr7.1:65030673-65030692 | None:intergenic | 35.0% |
| ! | TGTTAATTTAAAGCCCGATG+AGG | + | chr7.1:65032734-65032753 | MS.gene040231:intron | 35.0% |
| ! | TTTTCTTGAACTACCCTTAG+TGG | - | chr7.1:65030155-65030174 | None:intergenic | 35.0% |
| !! | CTTTCTAGTTCTCTCTAATG+TGG | - | chr7.1:65031619-65031638 | None:intergenic | 35.0% |
| !! | TTGATTTCTAGTTCCCTCTA+TGG | - | chr7.1:65031437-65031456 | None:intergenic | 35.0% |
| !!! | CATTGTTGGTTTAGTTTTCC+AGG | + | chr7.1:65027619-65027638 | MS.gene040231:CDS | 35.0% |
| !!! | CTTTTCTCTAGGACAGATAA+AGG | - | chr7.1:65032536-65032555 | None:intergenic | 35.0% |
| AAGAAACTTCTAGGCCATAG+AGG | + | chr7.1:65031420-65031439 | MS.gene040231:intron | 40.0% | |
| AAGGAGATGGAGAAACTTCT+AGG | + | chr7.1:65031593-65031612 | MS.gene040231:intron | 40.0% | |
| ACAGAGGAAATGAAGTCAGA+CGG | + | chr7.1:65032380-65032399 | MS.gene040231:intron | 40.0% | |
| ACTTCAACCTTCTCCTTCAA+AGG | - | chr7.1:65032993-65033012 | None:intergenic | 40.0% | |
| AGAAACTTCTAGGCCATAGA+GGG | + | chr7.1:65031421-65031440 | MS.gene040231:intron | 40.0% | |
| AGAACAGGGTGATTATTTGG+GGG | - | chr7.1:65029438-65029457 | None:intergenic | 40.0% | |
| AGTGAGCGTTTGATTGATGA+AGG | + | chr7.1:65031835-65031854 | MS.gene040231:intron | 40.0% | |
| ATCCCATTGTAGCAAATGGA+AGG | - | chr7.1:65028905-65028924 | None:intergenic | 40.0% | |
| ATTCTTCGTTAATGCTGCAC+AGG | + | chr7.1:65030572-65030591 | MS.gene040231:intron | 40.0% | |
| ATTGTGTCTTGGTGAAAGAC+TGG | - | chr7.1:65031183-65031202 | None:intergenic | 40.0% | |
| CAGAGTTACAGTAAAGCATG+TGG | - | chr7.1:65028163-65028182 | None:intergenic | 40.0% | |
| CTCTAGATTCTCTACCAGTA+TGG | - | chr7.1:65028567-65028586 | None:intergenic | 40.0% | |
| CTCTTGGATTGACGAAAGTA+CGG | - | chr7.1:65030638-65030657 | None:intergenic | 40.0% | |
| CTGTCCTAGAGAAAAGTCAA+AGG | + | chr7.1:65032540-65032559 | MS.gene040231:intron | 40.0% | |
| CTTCAGGATGGTATCATTCT+TGG | + | chr7.1:65028241-65028260 | MS.gene040231:intron | 40.0% | |
| CTTGTCTTGAATCATGGGAA+GGG | - | chr7.1:65030103-65030122 | None:intergenic | 40.0% | |
| GAATCCTGTCAGTTGTTTGA+GGG | + | chr7.1:65030522-65030541 | MS.gene040231:intron | 40.0% | |
| GAGAACAGGGTGATTATTTG+GGG | - | chr7.1:65029439-65029458 | None:intergenic | 40.0% | |
| GATTTGCAGATCTATCCACA+TGG | + | chr7.1:65028867-65028886 | MS.gene040231:intron | 40.0% | |
| GCACCCAACATATATTGTTG+TGG | + | chr7.1:65028331-65028350 | MS.gene040231:CDS | 40.0% | |
| GCCGCAAAAAACTGGAATAA+AGG | - | chr7.1:65031290-65031309 | None:intergenic | 40.0% | |
| GCGTTTGATTGATGAAGGTT+TGG | + | chr7.1:65031840-65031859 | MS.gene040231:intron | 40.0% | |
| GCTAAAAAGCAAAACGTGGT+TGG | - | chr7.1:65032258-65032277 | None:intergenic | 40.0% | |
| GCTTTGCTTCTAATTTAGCC+TGG | + | chr7.1:65030265-65030284 | MS.gene040231:intron | 40.0% | |
| TACAGTAAAGCATGTGGAGT+GGG | - | chr7.1:65028157-65028176 | None:intergenic | 40.0% | |
| TATCATGAGTTCATGAAGCG+GGG | + | chr7.1:65027728-65027747 | MS.gene040231:intron | 40.0% | |
| TCAGACGGCCAATTAACTAT+AGG | + | chr7.1:65032343-65032362 | MS.gene040231:intron | 40.0% | |
| TCAGCCTTTCCATTGATATG+TGG | + | chr7.1:65029747-65029766 | MS.gene040231:intron | 40.0% | |
| TCATGAATGCCGCAAAAAAC+TGG | - | chr7.1:65031298-65031317 | None:intergenic | 40.0% | |
| TCCCATTGTAGCAAATGGAA+GGG | - | chr7.1:65028904-65028923 | None:intergenic | 40.0% | |
| TGAAAAACATAGACGCCAGA+AGG | - | chr7.1:65028113-65028132 | None:intergenic | 40.0% | |
| TGTTTAATCAGCAAGAAGGG+TGG | - | chr7.1:65032879-65032898 | None:intergenic | 40.0% | |
| TGTTTGGATACATCATCCCA+AGG | - | chr7.1:65027758-65027777 | None:intergenic | 40.0% | |
| TTACACTCTGCATAAGATCC+AGG | - | chr7.1:65029545-65029564 | None:intergenic | 40.0% | |
| TTACAGTAAAGCATGTGGAG+TGG | - | chr7.1:65028158-65028177 | None:intergenic | 40.0% | |
| TTATGATAAAGAAGGGGGTC+GGG | + | chr7.1:65027989-65028008 | MS.gene040231:intron | 40.0% | |
| TTCTTCGTTAATGCTGCACA+GGG | + | chr7.1:65030573-65030592 | MS.gene040231:intron | 40.0% | |
| TTGCTTCTAATTTAGCCTGG+AGG | + | chr7.1:65030268-65030287 | MS.gene040231:intron | 40.0% | |
| TTGGAGAATGTAAAGCCTCT+TGG | - | chr7.1:65030654-65030673 | None:intergenic | 40.0% | |
| ! | ACCCTTCCATTTGCTACAAT+GGG | + | chr7.1:65028900-65028919 | MS.gene040231:CDS | 40.0% |
| ! | AGACTTTCAAGTCTTTCACC+AGG | + | chr7.1:65031545-65031564 | MS.gene040231:intron | 40.0% |
| ! | GATTACTCCTTTGAAGGAGA+AGG | + | chr7.1:65032983-65033002 | MS.gene040231:CDS | 40.0% |
| ! | TACATAAAGGTTGGGGGTAT+GGG | + | chr7.1:65031974-65031993 | MS.gene040231:intron | 40.0% |
| ! | TCTTGGATTGACGAAAGTAC+GGG | - | chr7.1:65030637-65030656 | None:intergenic | 40.0% |
| ! | TGTGCACAATTTGATGGTAC+TGG | - | chr7.1:65032494-65032513 | None:intergenic | 40.0% |
| !! | GGAAAGCTTGTTAATGACAG+AGG | + | chr7.1:65032364-65032383 | MS.gene040231:intron | 40.0% |
| !! | TACTGGTGGACTTCTTGAAT+AGG | - | chr7.1:65032477-65032496 | None:intergenic | 40.0% |
| !! | TGATGATGGGGTGAACATTA+TGG | + | chr7.1:65029679-65029698 | MS.gene040231:intron | 40.0% |
| AAGAATAACTAGGGAGGGAG+AGG | - | chr7.1:65029265-65029284 | None:intergenic | 45.0% | |
| AAGACAGGAACCACCATTGT+TGG | + | chr7.1:65027605-65027624 | MS.gene040231:CDS | 45.0% | |
| ACTATCAGGTTATGGGACCT+TGG | - | chr7.1:65029486-65029505 | None:intergenic | 45.0% | |
| ATCAAAACTGAACCCACCCT+TGG | - | chr7.1:65027528-65027547 | None:intergenic | 45.0% | |
| ATGCAGAGTGTAACAGCAGT+AGG | + | chr7.1:65029552-65029571 | MS.gene040231:intron | 45.0% | |
| CAACTACATCGCTACCATAC+TGG | + | chr7.1:65028550-65028569 | MS.gene040231:CDS | 45.0% | |
| CATACCCCCAACCTTTATGT+AGG | - | chr7.1:65031975-65031994 | None:intergenic | 45.0% | |
| CATTCTTGGAGCAGATACCA+GGG | + | chr7.1:65028255-65028274 | MS.gene040231:CDS | 45.0% | |
| CCAGATCCCATTGTAGCAAA+TGG | - | chr7.1:65028909-65028928 | None:intergenic | 45.0% | |
| CCTTTAATGGCGGCGAATAA+AGG | + | chr7.1:65029642-65029661 | MS.gene040231:intron | 45.0% | |
| CCTTTATTCGCCGCCATTAA+AGG | - | chr7.1:65029645-65029664 | None:intergenic | 45.0% | |
| CGTACTTTCGTCAATCCAAG+AGG | + | chr7.1:65030636-65030655 | MS.gene040231:CDS | 45.0% | |
| CTACATAAAGGTTGGGGGTA+TGG | + | chr7.1:65031973-65031992 | MS.gene040231:intron | 45.0% | |
| CTAGAAAGCAAAAGTGGCAG+AGG | + | chr7.1:65031631-65031650 | MS.gene040231:intron | 45.0% | |
| CTTGCGGGCATGAAACATTA+TGG | + | chr7.1:65031812-65031831 | MS.gene040231:intron | 45.0% | |
| GAACAGGGTGATTATTTGGG+GGG | - | chr7.1:65029437-65029456 | None:intergenic | 45.0% | |
| GCCCCTACTTATTTGAAGAC+AGG | + | chr7.1:65027590-65027609 | MS.gene040231:CDS | 45.0% | |
| GCTTGTCTTGAATCATGGGA+AGG | - | chr7.1:65030104-65030123 | None:intergenic | 45.0% | |
| GGAATCCTGTCAGTTGTTTG+AGG | + | chr7.1:65030521-65030540 | MS.gene040231:intron | 45.0% | |
| GTTGTTGAGTCGATATGTGC+TGG | + | chr7.1:65030427-65030446 | MS.gene040231:CDS | 45.0% | |
| TAATGCTGCACAGGGACATA+AGG | + | chr7.1:65030581-65030600 | MS.gene040231:intron | 45.0% | |
| TCAAAACTGAACCCACCCTT+GGG | - | chr7.1:65027527-65027546 | None:intergenic | 45.0% | |
| TCAGCTACCAGAAACTGCAA+TGG | - | chr7.1:65030879-65030898 | None:intergenic | 45.0% | |
| TCATTCTTGGAGCAGATACC+AGG | + | chr7.1:65028254-65028273 | MS.gene040231:CDS | 45.0% | |
| TGTTTCATGCCCGCAAGATT+TGG | - | chr7.1:65031809-65031828 | None:intergenic | 45.0% | |
| ! | AGCTGATGTAGCGAGAGTAT+AGG | + | chr7.1:65030893-65030912 | MS.gene040231:intron | 45.0% |
| ! | AGCTGCATTAGTTCTTGGTG+GGG | + | chr7.1:65028724-65028743 | MS.gene040231:CDS | 45.0% |
| ! | CACCCTTCCATTTGCTACAA+TGG | + | chr7.1:65028899-65028918 | MS.gene040231:CDS | 45.0% |
| ! | CAGCTGCATTAGTTCTTGGT+GGG | + | chr7.1:65028723-65028742 | MS.gene040231:CDS | 45.0% |
| ! | CCAAGGTTAGTTCGTAGATG+CGG | + | chr7.1:65030500-65030519 | MS.gene040231:intron | 45.0% |
| ! | CCATTTGCTACAATGGGATC+TGG | + | chr7.1:65028906-65028925 | MS.gene040231:CDS | 45.0% |
| ! | CTTGGATTGACGAAAGTACG+GGG | - | chr7.1:65030636-65030655 | None:intergenic | 45.0% |
| ! | GAGGTCTTTTGGTGGAAACA+AGG | - | chr7.1:65029578-65029597 | None:intergenic | 45.0% |
| ! | GCACAATTTGATGGTACTGG+TGG | - | chr7.1:65032491-65032510 | None:intergenic | 45.0% |
| ! | GTCTCAGCTGCATTAGTTCT+TGG | + | chr7.1:65028719-65028738 | MS.gene040231:CDS | 45.0% |
| ! | GTGGGCTAAAAAGCAAAACG+TGG | - | chr7.1:65032262-65032281 | None:intergenic | 45.0% |
| ! | TCAGCTGCATTAGTTCTTGG+TGG | + | chr7.1:65028722-65028741 | MS.gene040231:CDS | 45.0% |
| ! | TGGCACACAGCTTTTGTTCT+TGG | + | chr7.1:65032228-65032247 | MS.gene040231:intron | 45.0% |
| ! | TGTAGCAAATGGAAGGGTGT+CGG | - | chr7.1:65028898-65028917 | None:intergenic | 45.0% |
| ! | TTGACGAAAGTACGGGGATT+TGG | - | chr7.1:65030630-65030649 | None:intergenic | 45.0% |
| ! | TTTTTCTGCATTCTCGGCCT+TGG | + | chr7.1:65029719-65029738 | MS.gene040231:intron | 45.0% |
| !! | CTTCTAGGTTTGGTGTTTGG+TGG | - | chr7.1:65029830-65029849 | None:intergenic | 45.0% |
| !! | GCAGCCTTTGACTTTTCTCT+AGG | - | chr7.1:65032547-65032566 | None:intergenic | 45.0% |
| !! | TGGCTTCTAGGTTTGGTGTT+TGG | - | chr7.1:65029833-65029852 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTTACAATTATTA+AGG | - | chr7.1:65030211-65030230 | None:intergenic | 5.0% |
| AACCCTTCGCCTAGAGAACA+GGG | - | chr7.1:65029452-65029471 | None:intergenic | 50.0% | |
| AGCACCAATGACCGTTGTGA+GGG | - | chr7.1:65029609-65029628 | None:intergenic | 50.0% | |
| AGGGTGATTATTTGGGGGGA+GGG | - | chr7.1:65029433-65029452 | None:intergenic | 50.0% | |
| AGGGTTACACGAGTCTACCA+AGG | + | chr7.1:65029466-65029485 | MS.gene040231:intron | 50.0% | |
| ATCAGCGACAATGGGTCCTT+CGG | - | chr7.1:65028284-65028303 | None:intergenic | 50.0% | |
| ATGCAGCTGAGACATGACCT+TGG | - | chr7.1:65028712-65028731 | None:intergenic | 50.0% | |
| ATGGCGGCGAATAAAGGACT+CGG | + | chr7.1:65029648-65029667 | MS.gene040231:intron | 50.0% | |
| CCGCATCTACGAACTAACCT+TGG | - | chr7.1:65030503-65030522 | None:intergenic | 50.0% | |
| GATCTGGTGCAGAGAGATGA+AGG | + | chr7.1:65030394-65030413 | MS.gene040231:intron | 50.0% | |
| GCATCCCTCAAACAACTGAC+AGG | - | chr7.1:65030529-65030548 | None:intergenic | 50.0% | |
| GCTGATACAGAGGCTGTAAC+AGG | + | chr7.1:65028367-65028386 | MS.gene040231:CDS | 50.0% | |
| GGCACTATACACGTCCCTTA+TGG | + | chr7.1:65030768-65030787 | MS.gene040231:intron | 50.0% | |
| GGGGCAGCTTAACCTATTGT+TGG | + | chr7.1:65031920-65031939 | MS.gene040231:intron | 50.0% | |
| GGGGTGAACATTATGGTGCA+CGG | + | chr7.1:65029686-65029705 | MS.gene040231:intron | 50.0% | |
| GGGTGAACATTATGGTGCAC+GGG | + | chr7.1:65029687-65029706 | MS.gene040231:intron | 50.0% | |
| GTCAATAACCGCCTAGTGTG+CGG | + | chr7.1:65030747-65030766 | MS.gene040231:intron | 50.0% | |
| TAACCCTTCGCCTAGAGAAC+AGG | - | chr7.1:65029453-65029472 | None:intergenic | 50.0% | |
| TCTGTCGATCTTCCTCCCAA+GGG | + | chr7.1:65027509-65027528 | MS.gene040231:CDS | 50.0% | |
| TGGAAAGGCTGAAGAGACCA+AGG | - | chr7.1:65029739-65029758 | None:intergenic | 50.0% | |
| ! | GGCATTCTAGGGATGTCACA+AGG | + | chr7.1:65027849-65027868 | MS.gene040231:intron | 50.0% |
| !! | GGTTTGGTGTTTGGTGGTTG+TGG | - | chr7.1:65029824-65029843 | None:intergenic | 50.0% |
| AAACTGAACCCACCCTTGGG+AGG | - | chr7.1:65027524-65027543 | None:intergenic | 55.0% | |
| AAGTACGGGGATTTGGCGTG+AGG | - | chr7.1:65030623-65030642 | None:intergenic | 55.0% | |
| ACCAATGACCGTTGTGAGGG+GGG | - | chr7.1:65029606-65029625 | None:intergenic | 55.0% | |
| ACTCGGCAGCACGATGATGA+TGG | + | chr7.1:65029665-65029684 | MS.gene040231:intron | 55.0% | |
| CACCAATGACCGTTGTGAGG+GGG | - | chr7.1:65029607-65029626 | None:intergenic | 55.0% | |
| CACCCTGTTCTCTAGGCGAA+GGG | + | chr7.1:65029447-65029466 | MS.gene040231:intron | 55.0% | |
| CAGGGTGATTATTTGGGGGG+AGG | - | chr7.1:65029434-65029453 | None:intergenic | 55.0% | |
| CATGAAGCGGGGTCTTCCTT+GGG | + | chr7.1:65027739-65027758 | MS.gene040231:intron | 55.0% | |
| CGTGTATAGTGCCGCACACT+AGG | - | chr7.1:65030761-65030780 | None:intergenic | 55.0% | |
| CTCGGCAGCACGATGATGAT+GGG | + | chr7.1:65029666-65029685 | MS.gene040231:intron | 55.0% | |
| CTTGGTGGGGTTGACATCAC+TGG | + | chr7.1:65028737-65028756 | MS.gene040231:CDS | 55.0% | |
| GAGCACCAATGACCGTTGTG+AGG | - | chr7.1:65029610-65029629 | None:intergenic | 55.0% | |
| GCACCAATGACCGTTGTGAG+GGG | - | chr7.1:65029608-65029627 | None:intergenic | 55.0% | |
| GGGTGATTATTTGGGGGGAG+GGG | - | chr7.1:65029432-65029451 | None:intergenic | 55.0% | |
| GGTGATTATTTGGGGGGAGG+GGG | - | chr7.1:65029431-65029450 | None:intergenic | 55.0% | |
| GTATAGTGCCGCACACTAGG+CGG | - | chr7.1:65030758-65030777 | None:intergenic | 55.0% | |
| GTCTGTCGATCTTCCTCCCA+AGG | + | chr7.1:65027508-65027527 | MS.gene040231:CDS | 55.0% | |
| TCACCCTGTTCTCTAGGCGA+AGG | + | chr7.1:65029446-65029465 | MS.gene040231:intron | 55.0% | |
| TCATGAAGCGGGGTCTTCCT+TGG | + | chr7.1:65027738-65027757 | MS.gene040231:intron | 55.0% | |
| TCGATCTTCCTCCCAAGGGT+GGG | + | chr7.1:65027513-65027532 | MS.gene040231:CDS | 55.0% | |
| TGGAGTGGGTGACTGCTTCA+TGG | - | chr7.1:65028143-65028162 | None:intergenic | 55.0% | |
| TTCGACAGGCGCTCTACTTC+AGG | - | chr7.1:65032321-65032340 | None:intergenic | 55.0% | |
| ! | AAGGTTGGGGGTATGGGTGA+TGG | + | chr7.1:65031980-65031999 | MS.gene040231:intron | 55.0% |
| ! | AGGCACTGCTGCTGATACAG+AGG | + | chr7.1:65028357-65028376 | MS.gene040231:CDS | 55.0% |
| ! | TCGGCAGCACGATGATGATG+GGG | + | chr7.1:65029667-65029686 | MS.gene040231:intron | 55.0% |
| ! | TGAAGTAGAGCGCCTGTCGA+AGG | + | chr7.1:65032320-65032339 | MS.gene040231:intron | 55.0% |
| AATGACCGTTGTGAGGGGGG+TGG | - | chr7.1:65029603-65029622 | None:intergenic | 60.0% | |
| AATGGGTCCTTCGGTTGCCC+TGG | - | chr7.1:65028275-65028294 | None:intergenic | 60.0% | |
| ACCCCCCTCACAACGGTCAT+TGG | + | chr7.1:65029602-65029621 | MS.gene040231:intron | 60.0% | |
| AGCGCCTGTCGAAGGTCAGA+CGG | + | chr7.1:65032328-65032347 | MS.gene040231:intron | 60.0% | |
| GCAGATACCAGGGCAACCGA+AGG | + | chr7.1:65028265-65028284 | MS.gene040231:CDS | 60.0% | |
| GTCGATCTTCCTCCCAAGGG+TGG | + | chr7.1:65027512-65027531 | MS.gene040231:CDS | 60.0% | |
| TTGGCCGTCTGACCTTCGAC+AGG | - | chr7.1:65032335-65032354 | None:intergenic | 60.0% | |
| ! | GGGTGGCTGAGGTCTTTTGG+TGG | - | chr7.1:65029586-65029605 | None:intergenic | 60.0% |
| !! | AGGGTGTCGGTTGACCCATG+TGG | - | chr7.1:65028885-65028904 | None:intergenic | 60.0% |
| CTCAGCCACCCCCCTCACAA+CGG | + | chr7.1:65029595-65029614 | MS.gene040231:intron | 65.0% | |
| ! | GGGGGGTGGCTGAGGTCTTT+TGG | - | chr7.1:65029589-65029608 | None:intergenic | 65.0% |
| CGTTGTGAGGGGGGTGGCTG+AGG | - | chr7.1:65029597-65029616 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 65027500 | 65033040 | 65027500 | ID=MS.gene040231 |
| chr7.1 | mRNA | 65027500 | 65033040 | 65027500 | ID=MS.gene040231.t1;Parent=MS.gene040231 |
| chr7.1 | exon | 65027500 | 65027640 | 65027500 | ID=MS.gene040231.t1.exon1;Parent=MS.gene040231.t1 |
| chr7.1 | CDS | 65027500 | 65027640 | 65027500 | ID=cds.MS.gene040231.t1;Parent=MS.gene040231.t1 |
| chr7.1 | exon | 65028247 | 65028388 | 65028247 | ID=MS.gene040231.t1.exon2;Parent=MS.gene040231.t1 |
| chr7.1 | CDS | 65028247 | 65028388 | 65028247 | ID=cds.MS.gene040231.t1;Parent=MS.gene040231.t1 |
| chr7.1 | exon | 65028530 | 65028626 | 65028530 | ID=MS.gene040231.t1.exon3;Parent=MS.gene040231.t1 |
| chr7.1 | CDS | 65028530 | 65028626 | 65028530 | ID=cds.MS.gene040231.t1;Parent=MS.gene040231.t1 |
| chr7.1 | exon | 65028706 | 65028775 | 65028706 | ID=MS.gene040231.t1.exon4;Parent=MS.gene040231.t1 |
| chr7.1 | CDS | 65028706 | 65028775 | 65028706 | ID=cds.MS.gene040231.t1;Parent=MS.gene040231.t1 |
| chr7.1 | exon | 65028876 | 65028980 | 65028876 | ID=MS.gene040231.t1.exon5;Parent=MS.gene040231.t1 |
| chr7.1 | CDS | 65028876 | 65028980 | 65028876 | ID=cds.MS.gene040231.t1;Parent=MS.gene040231.t1 |
| chr7.1 | exon | 65030406 | 65030504 | 65030406 | ID=MS.gene040231.t1.exon6;Parent=MS.gene040231.t1 |
| chr7.1 | CDS | 65030406 | 65030504 | 65030406 | ID=cds.MS.gene040231.t1;Parent=MS.gene040231.t1 |
| chr7.1 | exon | 65030594 | 65030681 | 65030594 | ID=MS.gene040231.t1.exon7;Parent=MS.gene040231.t1 |
| chr7.1 | CDS | 65030594 | 65030681 | 65030594 | ID=cds.MS.gene040231.t1;Parent=MS.gene040231.t1 |
| chr7.1 | exon | 65032967 | 65033040 | 65032967 | ID=MS.gene040231.t1.exon8;Parent=MS.gene040231.t1 |
| chr7.1 | CDS | 65032967 | 65033040 | 65032967 | ID=cds.MS.gene040231.t1;Parent=MS.gene040231.t1 |
| Gene Sequence |
| Protein sequence |
