Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35561.t1 | XP_003602092.1 | 99.3 | 270 | 2 | 0 | 3 | 272 | 2 | 271 | 1.50E-151 | 545.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35561.t1 | O24361 | 83.8 | 271 | 44 | 0 | 1 | 271 | 1 | 271 | 6.1e-130 | 464.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35561.t1 | G7J5I9 | 99.3 | 270 | 2 | 0 | 3 | 272 | 2 | 271 | 1.1e-151 | 545.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene35561 | MS.gene022454 | PPI |
| MS.gene35561 | MS.gene87139 | PPI |
| MS.gene35561 | MS.gene98293 | PPI |
| MS.gene35561 | MS.gene46543 | PPI |
| MS.gene041280 | MS.gene35561 | PPI |
| MS.gene35561 | MS.gene040231 | PPI |
| MS.gene35561 | MS.gene71557 | PPI |
| MS.gene35561 | MS.gene035129 | PPI |
| MS.gene35561 | MS.gene037240 | PPI |
| MS.gene52459 | MS.gene35561 | PPI |
| MS.gene35561 | MS.gene29792 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35561.t1 | MTR_3g089040 | 99.259 | 270 | 2 | 0 | 3 | 272 | 2 | 271 | 0.0 | 554 |
| MS.gene35561.t1 | MTR_3g109210 | 31.351 | 185 | 125 | 2 | 55 | 238 | 13 | 196 | 3.22e-21 | 89.7 |
| MS.gene35561.t1 | MTR_7g032930 | 29.302 | 215 | 144 | 4 | 25 | 234 | 5 | 216 | 2.70e-18 | 82.4 |
| MS.gene35561.t1 | MTR_7g037830 | 29.302 | 215 | 144 | 4 | 25 | 234 | 5 | 216 | 2.90e-18 | 82.4 |
| MS.gene35561.t1 | MTR_1g112250 | 28.652 | 178 | 113 | 4 | 43 | 211 | 24 | 196 | 3.19e-15 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35561.t1 | AT3G26340 | 83.824 | 272 | 42 | 1 | 1 | 270 | 1 | 272 | 8.57e-169 | 468 |
| MS.gene35561.t1 | AT1G13060 | 82.657 | 271 | 45 | 1 | 1 | 269 | 1 | 271 | 1.66e-165 | 459 |
| MS.gene35561.t1 | AT1G13060 | 75.932 | 295 | 45 | 2 | 1 | 269 | 1 | 295 | 6.13e-160 | 446 |
| MS.gene35561.t1 | AT1G13060 | 75.932 | 295 | 45 | 2 | 1 | 269 | 1 | 295 | 6.13e-160 | 446 |
| MS.gene35561.t1 | AT4G31300 | 30.317 | 221 | 147 | 4 | 55 | 272 | 12 | 228 | 2.89e-24 | 97.8 |
| MS.gene35561.t1 | AT4G31300 | 30.317 | 221 | 147 | 4 | 55 | 272 | 12 | 228 | 2.89e-24 | 97.8 |
| MS.gene35561.t1 | AT4G31300 | 29.864 | 221 | 149 | 3 | 55 | 272 | 12 | 229 | 3.64e-24 | 97.8 |
| MS.gene35561.t1 | AT5G40580 | 31.401 | 207 | 134 | 4 | 25 | 226 | 6 | 209 | 2.15e-19 | 85.9 |
| MS.gene35561.t1 | AT5G40580 | 31.401 | 207 | 134 | 4 | 25 | 226 | 6 | 209 | 2.15e-19 | 85.9 |
| MS.gene35561.t1 | AT3G27430 | 29.767 | 215 | 143 | 4 | 25 | 234 | 6 | 217 | 5.16e-19 | 84.7 |
| MS.gene35561.t1 | AT3G27430 | 30.918 | 207 | 135 | 4 | 25 | 226 | 6 | 209 | 6.19e-19 | 84.3 |
| MS.gene35561.t1 | AT5G40580 | 29.612 | 206 | 133 | 4 | 25 | 226 | 6 | 203 | 2.40e-15 | 74.3 |
| MS.gene35561.t1 | AT5G40580 | 29.612 | 206 | 133 | 4 | 25 | 226 | 6 | 203 | 2.40e-15 | 74.3 |
| MS.gene35561.t1 | AT1G53850 | 29.213 | 178 | 112 | 4 | 43 | 211 | 24 | 196 | 2.53e-15 | 73.9 |
| MS.gene35561.t1 | AT1G53850 | 29.213 | 178 | 112 | 4 | 43 | 211 | 24 | 196 | 2.53e-15 | 73.9 |
| MS.gene35561.t1 | AT3G27430 | 28.037 | 214 | 142 | 4 | 25 | 234 | 6 | 211 | 5.54e-15 | 73.2 |
| MS.gene35561.t1 | AT3G14290 | 28.652 | 178 | 113 | 4 | 43 | 211 | 24 | 196 | 7.58e-15 | 72.4 |
| MS.gene35561.t1 | AT1G77440 | 26.984 | 189 | 136 | 2 | 55 | 241 | 8 | 196 | 5.10e-14 | 69.7 |
| MS.gene35561.t1 | AT1G77440 | 26.984 | 189 | 136 | 2 | 55 | 241 | 8 | 196 | 5.10e-14 | 69.7 |
| MS.gene35561.t1 | AT1G21720 | 28.042 | 189 | 134 | 2 | 55 | 241 | 8 | 196 | 5.75e-14 | 69.3 |
Find 80 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCACGGTGCTTGGGGTAAC+TGG | 0.134274 | 3.3:+64634689 | None:intergenic |
| GTGCTGCTGATTGCCAATTT+TGG | 0.177238 | 3.3:-64637824 | MS.gene35561:CDS |
| CAAGATTCCTATGCCAAAAT+TGG | 0.255102 | 3.3:+64637811 | None:intergenic |
| AGTACTTACATCGTTGGAAT+TGG | 0.281197 | 3.3:+64638417 | None:intergenic |
| TGCTGATTCTCGTGCTAGTA+TGG | 0.289149 | 3.3:-64638022 | MS.gene35561:CDS |
| TTTCTTGCTCCACGGTGCTT+GGG | 0.316398 | 3.3:+64634681 | None:intergenic |
| AGTGAAGGAGGAAGACTAAA+AGG | 0.328832 | 3.3:-64635495 | MS.gene35561:CDS |
| AAAAGAAGAATTTCAGTAAC+AGG | 0.343722 | 3.3:-64635710 | MS.gene35561:CDS |
| ATTTCTTGCTCCACGGTGCT+TGG | 0.356795 | 3.3:+64634680 | None:intergenic |
| GTTTACTATGTGGGACCAAC+TGG | 0.373655 | 3.3:-64634764 | MS.gene35561:CDS |
| AGCTTCGGAACTGGCTCGAC+GGG | 0.396108 | 3.3:-64635305 | MS.gene35561:CDS |
| TATATTCAAGGAGGGTGTTA+TGG | 0.396989 | 3.3:-64638049 | MS.gene35561:CDS |
| TCTGGTTCGCCATATGCTTA+TGG | 0.408064 | 3.3:-64635453 | MS.gene35561:CDS |
| TCTGTTGGTACCATGATTGC+TGG | 0.409418 | 3.3:-64635635 | MS.gene35561:CDS |
| GCCATTGTGCCAAGCATGTA+AGG | 0.415111 | 3.3:+64637852 | None:intergenic |
| TCACATGGAATCAACGTTGC+TGG | 0.415463 | 3.3:-64638472 | MS.gene35561:CDS |
| GAAATTAATCCTTACATGCT+TGG | 0.415898 | 3.3:-64637861 | MS.gene35561:CDS |
| GTACTTACATCGTTGGAATT+GGG | 0.423890 | 3.3:+64638418 | None:intergenic |
| CAAGAAATGGTTGAGGCAGC+TGG | 0.428427 | 3.3:-64634665 | MS.gene35561:CDS |
| TTATACTCTTACCGTGGAAT+GGG | 0.429460 | 3.3:-64635662 | MS.gene35561:CDS |
| AATGTTCGCAAGTAACTTAG+AGG | 0.431758 | 3.3:+64635685 | None:intergenic |
| GAATTGGGAAGCTGGAACGA+TGG | 0.442973 | 3.3:+64638433 | None:intergenic |
| TTTATACTCTTACCGTGGAA+TGG | 0.452750 | 3.3:-64635663 | MS.gene35561:CDS |
| AATTGAGGAAGCTTCGGAAC+TGG | 0.458044 | 3.3:-64635314 | MS.gene35561:CDS |
| CTCATCCCATCCAGCAATCA+TGG | 0.459037 | 3.3:+64635625 | None:intergenic |
| AGAGTTGTAGTACCCTTTGC+GGG | 0.459082 | 3.3:+64638078 | None:intergenic |
| TACATGCTTGGCACAATGGC+TGG | 0.462554 | 3.3:-64637849 | MS.gene35561:CDS |
| GCAGTGTCGCTTGCATGAAT+TGG | 0.470166 | 3.3:-64635738 | MS.gene35561:intron |
| AAGAGTTGTAGTACCCTTTG+CGG | 0.475469 | 3.3:+64638077 | None:intergenic |
| AATTGGGAAGCTGGAACGAT+GGG | 0.478855 | 3.3:+64638434 | None:intergenic |
| CCACGGTGCTTGGGGTAACT+GGG | 0.479508 | 3.3:+64634690 | None:intergenic |
| AATAGATTCTCTGTAGGATC+TGG | 0.481073 | 3.3:-64635471 | MS.gene35561:CDS |
| TTGGGGTAACTGGGTTGTAA+TGG | 0.483615 | 3.3:+64634699 | None:intergenic |
| GCCATATGCTTATGGTGTAC+TGG | 0.488122 | 3.3:-64635445 | MS.gene35561:CDS |
| CATGTCAATTGAGGAAGCTT+CGG | 0.489341 | 3.3:-64635320 | MS.gene35561:CDS |
| TCCAGTACACCATAAGCATA+TGG | 0.490236 | 3.3:+64635444 | None:intergenic |
| AAGCACCGTGGAGCAAGAAA+TGG | 0.490405 | 3.3:-64634678 | MS.gene35561:CDS |
| GCATAGGAATCTTGGCATCA+AGG | 0.492159 | 3.3:-64637802 | MS.gene35561:intron |
| TTCTTGCTCCACGGTGCTTG+GGG | 0.499865 | 3.3:+64634682 | None:intergenic |
| CATCGTTGGAATTGGGAAGC+TGG | 0.501956 | 3.3:+64638425 | None:intergenic |
| CTCAACCATTTCTTGCTCCA+CGG | 0.509567 | 3.3:+64634673 | None:intergenic |
| TGGTACCATGATTGCTGGAT+GGG | 0.520356 | 3.3:-64635630 | MS.gene35561:CDS |
| ATGATTTCAGTTTACTATGT+GGG | 0.524079 | 3.3:-64634773 | MS.gene35561:intron |
| ACCGCTAGCAACTCCACCAC+TGG | 0.524125 | 3.3:+64635252 | None:intergenic |
| TTCCCGTCTTTGATTTCACA+TGG | 0.532073 | 3.3:-64638487 | MS.gene35561:CDS |
| CAAATATGACATGTCAATTG+AGG | 0.536306 | 3.3:-64635329 | MS.gene35561:CDS |
| AAGCTTCGGAACTGGCTCGA+CGG | 0.540085 | 3.3:-64635306 | MS.gene35561:CDS |
| GCTGATTCTCGTGCTAGTAT+GGG | 0.545752 | 3.3:-64638021 | MS.gene35561:CDS |
| TCCTTACATGCTTGGCACAA+TGG | 0.547226 | 3.3:-64637853 | MS.gene35561:CDS |
| TTGGTACCATGATTGCTGGA+TGG | 0.548451 | 3.3:-64635631 | MS.gene35561:CDS |
| TTCCATGTGAAATCAAAGAC+GGG | 0.553880 | 3.3:+64638485 | None:intergenic |
| TATGATTTCAGTTTACTATG+TGG | 0.556479 | 3.3:-64634774 | MS.gene35561:intron |
| CGTGGAATGGGATTATCTGT+TGG | 0.563183 | 3.3:-64635650 | MS.gene35561:CDS |
| ATTCCATGTGAAATCAAAGA+CGG | 0.565258 | 3.3:+64638484 | None:intergenic |
| TATCATGCAACATTTCGTGA+TGG | 0.571275 | 3.3:-64635277 | MS.gene35561:CDS |
| GACAACTTCTTCCATCCAGT+TGG | 0.571970 | 3.3:+64634749 | None:intergenic |
| CAGATGGTGAAACCCGCAAA+GGG | 0.573024 | 3.3:-64638090 | MS.gene35561:CDS |
| ACTGGATGGAAGAAGTTGTC+TGG | 0.573264 | 3.3:-64634746 | MS.gene35561:CDS |
| TATTATGTTGATAGTGAAGG+AGG | 0.578210 | 3.3:-64635507 | MS.gene35561:CDS |
| CTTATGGTGTACTGGACAGC+GGG | 0.578673 | 3.3:-64635437 | MS.gene35561:intron |
| TGTTAAAGAAGCTATTCAGA+TGG | 0.585333 | 3.3:-64638106 | MS.gene35561:CDS |
| CTATATTATGTTGATAGTGA+AGG | 0.590992 | 3.3:-64635510 | MS.gene35561:CDS |
| TTTCGTGATGGAGCCAGTGG+TGG | 0.600707 | 3.3:-64635265 | MS.gene35561:CDS |
| AAAGGCAATAGATTCTCTGT+AGG | 0.617473 | 3.3:-64635477 | MS.gene35561:CDS |
| TCAGATGGTGAAACCCGCAA+AGG | 0.618420 | 3.3:-64638091 | MS.gene35561:CDS |
| GATTCTCGTGCTAGTATGGG+AGG | 0.632201 | 3.3:-64638018 | MS.gene35561:CDS |
| GCCAGTGGTGGAGTTGCTAG+CGG | 0.635532 | 3.3:-64635253 | MS.gene35561:intron |
| CGTGGAGCAAGAAATGGTTG+AGG | 0.636907 | 3.3:-64634672 | MS.gene35561:CDS |
| CGGGAATGATTCGAGAGCAG+TGG | 0.637862 | 3.3:+64638504 | None:intergenic |
| ACTATGTGGGACCAACTGGA+TGG | 0.638522 | 3.3:-64634760 | MS.gene35561:CDS |
| TTGGGAAGCTGGAACGATGG+GGG | 0.639176 | 3.3:+64638436 | None:intergenic |
| CTATCAACATAATATAGACC+AGG | 0.640233 | 3.3:+64635516 | None:intergenic |
| ATTGGGAAGCTGGAACGATG+GGG | 0.645551 | 3.3:+64638435 | None:intergenic |
| CAACAGATAATCCCATTCCA+CGG | 0.648001 | 3.3:+64635651 | None:intergenic |
| ATGCTTGGCACAATGGCTGG+TGG | 0.656629 | 3.3:-64637846 | MS.gene35561:CDS |
| CCCAGTTACCCCAAGCACCG+TGG | 0.664894 | 3.3:-64634690 | MS.gene35561:CDS |
| GCTTATGGTGTACTGGACAG+CGG | 0.681819 | 3.3:-64635438 | MS.gene35561:CDS |
| GATTGCTGGATGGGATGAGA+CGG | 0.686419 | 3.3:-64635621 | MS.gene35561:intron |
| ACATTTCGTGATGGAGCCAG+TGG | 0.704050 | 3.3:-64635268 | MS.gene35561:CDS |
| AAGTTGTCTGGTGATGATGT+TGG | 0.704292 | 3.3:-64634734 | MS.gene35561:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAATATTGTAAAATAG+AGG | + | chr3.3:64637206-64637225 | None:intergenic | 10.0% |
| !!! | AAATTAGAAGAATTTTATTT+AGG | - | chr3.3:64634921-64634940 | MS.gene35561:intron | 10.0% |
| !!! | AATTAGAAGAATTTTATTTA+GGG | - | chr3.3:64634922-64634941 | MS.gene35561:intron | 10.0% |
| !!! | GTATTTATCTATTTAAAATA+AGG | - | chr3.3:64636423-64636442 | MS.gene35561:intron | 10.0% |
| !! | AGATAATATGATTTAATTCT+AGG | - | chr3.3:64636558-64636577 | MS.gene35561:intron | 15.0% |
| !! | ATATATTAGGCTTAATATTA+AGG | - | chr3.3:64636869-64636888 | MS.gene35561:intron | 15.0% |
| !! | GATTTACCTTTATTAATTAA+AGG | - | chr3.3:64636153-64636172 | MS.gene35561:intron | 15.0% |
| !! | TATCATATAGGTATAAAAAT+GGG | + | chr3.3:64636935-64636954 | None:intergenic | 15.0% |
| !! | TGTAACATCATAAATAAAAA+AGG | + | chr3.3:64637386-64637405 | None:intergenic | 15.0% |
| !! | TTTATTTATGATGTTACAAA+TGG | - | chr3.3:64637388-64637407 | MS.gene35561:intron | 15.0% |
| !!! | AATGATTGAATCTTTTTTTA+GGG | - | chr3.3:64637635-64637654 | MS.gene35561:intron | 15.0% |
| !!! | TGGTATATTTTGAATATATT+AGG | - | chr3.3:64636856-64636875 | MS.gene35561:intron | 15.0% |
| !!! | TTGTTTGGATTTTAAAAAAA+TGG | - | chr3.3:64635884-64635903 | MS.gene35561:intron | 15.0% |
| !!! | TTTTTTTAAAATCCAAACAA+TGG | + | chr3.3:64635884-64635903 | None:intergenic | 15.0% |
| !! | AACCGTAAAATTAAAAACAT+TGG | + | chr3.3:64634897-64634916 | None:intergenic | 20.0% |
| !! | AATCAGTACAAACTAAATTT+AGG | - | chr3.3:64634828-64634847 | MS.gene35561:intron | 20.0% |
| !! | ACCGTAAAATTAAAAACATT+GGG | + | chr3.3:64634896-64634915 | None:intergenic | 20.0% |
| !! | AGAAAAATAAGCATATAAGA+TGG | + | chr3.3:64635415-64635434 | None:intergenic | 20.0% |
| !! | AGGAGAAGAAATTTAATATA+AGG | - | chr3.3:64636511-64636530 | MS.gene35561:intron | 20.0% |
| !! | GTATCATATAGGTATAAAAA+TGG | + | chr3.3:64636936-64636955 | None:intergenic | 20.0% |
| !! | GTTAGAAATTAAAATACTCT+AGG | + | chr3.3:64638097-64638116 | None:intergenic | 20.0% |
| !! | TTTAAAAAAATGGATGGAAT+GGG | - | chr3.3:64635894-64635913 | MS.gene35561:intron | 20.0% |
| !! | TTTATAGGTAAAAGAATACA+AGG | - | chr3.3:64636315-64636334 | MS.gene35561:intron | 20.0% |
| !! | TTTATTGCTATAAACTTGTA+AGG | - | chr3.3:64638342-64638361 | MS.gene35561:intron | 20.0% |
| !! | TTTCAATGTTAATAACTCAA+AGG | - | chr3.3:64636491-64636510 | MS.gene35561:intron | 20.0% |
| !!! | ATGTTTGTCATTGTTTTTTA+TGG | - | chr3.3:64637099-64637118 | MS.gene35561:intron | 20.0% |
| !!! | CAATGATTGAATCTTTTTTT+AGG | - | chr3.3:64637634-64637653 | MS.gene35561:intron | 20.0% |
| !!! | CTTTTTTTTTTCTTTGGTAT+TGG | - | chr3.3:64635205-64635224 | MS.gene35561:intron | 20.0% |
| !!! | TCAACTCTTTTTTTTTTCTT+TGG | - | chr3.3:64635199-64635218 | MS.gene35561:intron | 20.0% |
| !!! | TGTTTGTCATTGTTTTTTAT+GGG | - | chr3.3:64637100-64637119 | MS.gene35561:intron | 20.0% |
| !!! | TTGGATTTTAAAAAAATGGA+TGG | - | chr3.3:64635888-64635907 | MS.gene35561:intron | 20.0% |
| !!! | TTTATGTTTTTGTGAAATTG+TGG | - | chr3.3:64634945-64634964 | MS.gene35561:intron | 20.0% |
| !!! | TTTTAAAAAAATGGATGGAA+TGG | - | chr3.3:64635893-64635912 | MS.gene35561:intron | 20.0% |
| !!! | TTTTATACCTATATGATACA+CGG | - | chr3.3:64636937-64636956 | MS.gene35561:intron | 20.0% |
| !!! | TTTTCAATCATGGAAATTAA+TGG | - | chr3.3:64637135-64637154 | MS.gene35561:intron | 20.0% |
| ! | AAAAGAAGAATTTCAGTAAC+AGG | - | chr3.3:64637465-64637484 | MS.gene35561:intron | 25.0% |
| ! | AAATAAGCATATAAGATGGA+AGG | + | chr3.3:64635411-64635430 | None:intergenic | 25.0% |
| ! | AAATATTCCATTCCATTGTT+TGG | + | chr3.3:64636697-64636716 | None:intergenic | 25.0% |
| ! | AATATTCCATTCCATTGTTT+GGG | + | chr3.3:64636696-64636715 | None:intergenic | 25.0% |
| ! | AATTAAGGAGTGAAAAAAGT+GGG | - | chr3.3:64635604-64635623 | MS.gene35561:intron | 25.0% |
| ! | AGTATAAATATGCTACAAAC+TGG | + | chr3.3:64635530-64635549 | None:intergenic | 25.0% |
| ! | ATAGTACTATTAGAGCAAAA+AGG | + | chr3.3:64637605-64637624 | None:intergenic | 25.0% |
| ! | ATGATTTCAGTTTACTATGT+GGG | - | chr3.3:64638402-64638421 | MS.gene35561:intron | 25.0% |
| ! | GAATGAATTGAATAAAGAGT+AGG | - | chr3.3:64634971-64634990 | MS.gene35561:intron | 25.0% |
| ! | TACAATTTCTTTATCACACT+AGG | - | chr3.3:64637821-64637840 | MS.gene35561:CDS | 25.0% |
| ! | TATGATTTCAGTTTACTATG+TGG | - | chr3.3:64638401-64638420 | MS.gene35561:intron | 25.0% |
| ! | TGAAATTATTGTCACTAACT+TGG | - | chr3.3:64638367-64638386 | MS.gene35561:intron | 25.0% |
| ! | TGTAGCATATTTATACTCAA+TGG | - | chr3.3:64635533-64635552 | MS.gene35561:intron | 25.0% |
| !! | ACTTTTTGTTAGAAAGAGTA+GGG | - | chr3.3:64638132-64638151 | MS.gene35561:intron | 25.0% |
| !! | TTGCTCTAATAGTACTATTT+TGG | - | chr3.3:64637607-64637626 | MS.gene35561:intron | 25.0% |
| !!! | AACTCTTGCTTTTATATTCA+AGG | - | chr3.3:64635114-64635133 | MS.gene35561:intron | 25.0% |
| !!! | AATGGATTAATTGAATGACT+TGG | - | chr3.3:64637312-64637331 | MS.gene35561:intron | 25.0% |
| !!! | ACTGGAATTTTTAGGATAAT+AGG | - | chr3.3:64636177-64636196 | MS.gene35561:intron | 25.0% |
| !!! | ATCTGAATTGTTTTGTGTTT+GGG | - | chr3.3:64635025-64635044 | MS.gene35561:intron | 25.0% |
| !!! | CTATATTATGTTGATAGTGA+AGG | - | chr3.3:64637665-64637684 | MS.gene35561:intron | 25.0% |
| !!! | CTGGAATTTTTAGGATAATA+GGG | - | chr3.3:64636178-64636197 | MS.gene35561:intron | 25.0% |
| !!! | GCCCAATGTTTTTAATTTTA+CGG | - | chr3.3:64634892-64634911 | MS.gene35561:intron | 25.0% |
| !!! | GTTTGTCATTGTTTTTTATG+GGG | - | chr3.3:64637101-64637120 | MS.gene35561:intron | 25.0% |
| !!! | TATCTGAATTGTTTTGTGTT+TGG | - | chr3.3:64635024-64635043 | MS.gene35561:intron | 25.0% |
| !!! | TATCTGATATGTTTTCAAGA+AGG | - | chr3.3:64635642-64635661 | MS.gene35561:CDS | 25.0% |
| !!! | TGGAATTTTTAGGATAATAG+GGG | - | chr3.3:64636179-64636198 | MS.gene35561:intron | 25.0% |
| !!! | TTATGTCATTGGTTTTGAAT+TGG | - | chr3.3:64636836-64636855 | MS.gene35561:intron | 25.0% |
| AAAGAGTAGGTTGTAGAAAA+AGG | - | chr3.3:64634984-64635003 | MS.gene35561:intron | 30.0% | |
| AAAGGTAAATCAATGATACG+AGG | + | chr3.3:64636144-64636163 | None:intergenic | 30.0% | |
| AACATCTAAGTCTTAGTCTA+AGG | + | chr3.3:64636818-64636837 | None:intergenic | 30.0% | |
| AAGAAGGTCATGTAAATGAT+GGG | - | chr3.3:64635658-64635677 | MS.gene35561:CDS | 30.0% | |
| AAGGTAAATCAATGATACGA+GGG | + | chr3.3:64636143-64636162 | None:intergenic | 30.0% | |
| ACTCTTTCTAACAAAAAGTG+AGG | + | chr3.3:64638131-64638150 | None:intergenic | 30.0% | |
| AGAAAAATAAGAGGAGAGTA+TGG | + | chr3.3:64635952-64635971 | None:intergenic | 30.0% | |
| AGACTTAGATGTTATGTCAT+TGG | - | chr3.3:64636825-64636844 | MS.gene35561:intron | 30.0% | |
| AGACTTGACTGATATTTGAT+TGG | - | chr3.3:64636777-64636796 | MS.gene35561:intron | 30.0% | |
| AGTACAACAGTTATCATGTT+TGG | + | chr3.3:64638184-64638203 | None:intergenic | 30.0% | |
| AGTATAGCACAATTGCATAA+CGG | + | chr3.3:64637173-64637192 | None:intergenic | 30.0% | |
| ATAATACCCAAACAATGGAA+TGG | - | chr3.3:64636687-64636706 | MS.gene35561:intron | 30.0% | |
| ATAGATATAGCTGGTCAATA+GGG | + | chr3.3:64637963-64637982 | None:intergenic | 30.0% | |
| ATATGCATGATCAGTGAAAA+TGG | + | chr3.3:64636044-64636063 | None:intergenic | 30.0% | |
| ATTAAGGAGTGAAAAAAGTG+GGG | - | chr3.3:64635605-64635624 | MS.gene35561:intron | 30.0% | |
| ATTAGTCGTTTCAGATGAAA+TGG | - | chr3.3:64635834-64635853 | MS.gene35561:intron | 30.0% | |
| ATTCCATGTGAAATCAAAGA+CGG | + | chr3.3:64634694-64634713 | None:intergenic | 30.0% | |
| ATTGTTTGGGTATTATACGA+CGG | + | chr3.3:64636683-64636702 | None:intergenic | 30.0% | |
| ATTTCCATGATTGAAAACAC+TGG | + | chr3.3:64637132-64637151 | None:intergenic | 30.0% | |
| CAAATATGACATGTCAATTG+AGG | - | chr3.3:64637846-64637865 | MS.gene35561:CDS | 30.0% | |
| CAATATACCGTGTATCATAT+AGG | + | chr3.3:64636947-64636966 | None:intergenic | 30.0% | |
| CAATTAAGGAGTGAAAAAAG+TGG | - | chr3.3:64635603-64635622 | MS.gene35561:intron | 30.0% | |
| CCAGTGCCTTTAATTAATAA+AGG | + | chr3.3:64636162-64636181 | None:intergenic | 30.0% | |
| CTACAAGGATTCAAAATTGA+AGG | + | chr3.3:64637287-64637306 | None:intergenic | 30.0% | |
| CTATCAACATAATATAGACC+AGG | + | chr3.3:64637662-64637681 | None:intergenic | 30.0% | |
| CTCTTTCTAACAAAAAGTGA+GGG | + | chr3.3:64638130-64638149 | None:intergenic | 30.0% | |
| GAAATTAATCCTTACATGCT+TGG | - | chr3.3:64635314-64635333 | MS.gene35561:CDS | 30.0% | |
| GCGATGAATGATTTCATAAT+CGG | + | chr3.3:64634796-64634815 | None:intergenic | 30.0% | |
| GTACAACAGTTATCATGTTT+GGG | + | chr3.3:64638183-64638202 | None:intergenic | 30.0% | |
| TCAAATATCAGTCAAGTCTA+AGG | + | chr3.3:64636776-64636795 | None:intergenic | 30.0% | |
| TGGAATGATATTCCATTGTT+TGG | - | chr3.3:64635869-64635888 | MS.gene35561:intron | 30.0% | |
| TGGGAACTATTGAAATTGAT+AGG | - | chr3.3:64635695-64635714 | MS.gene35561:CDS | 30.0% | |
| TGTTAAAGAAGCTATTCAGA+TGG | - | chr3.3:64635069-64635088 | MS.gene35561:intron | 30.0% | |
| TTAATCCATTACCATCTACA+AGG | + | chr3.3:64637302-64637321 | None:intergenic | 30.0% | |
| ! | AACATTTTATACTCTTACCG+TGG | - | chr3.3:64637507-64637526 | MS.gene35561:intron | 30.0% |
| ! | ACAGTAGTTTTTATTGTGGT+CGG | - | chr3.3:64637037-64637056 | MS.gene35561:intron | 30.0% |
| ! | ATGGGAATGTTAATGGTTTT+GGG | - | chr3.3:64635676-64635695 | MS.gene35561:CDS | 30.0% |
| ! | CAATTTTGAATCCTTGTAGA+TGG | - | chr3.3:64637288-64637307 | MS.gene35561:intron | 30.0% |
| ! | CCTTTATTAATTAAAGGCAC+TGG | - | chr3.3:64636159-64636178 | MS.gene35561:intron | 30.0% |
| ! | GTAAATGATGGGAATGTTAA+TGG | - | chr3.3:64635669-64635688 | MS.gene35561:CDS | 30.0% |
| ! | TGACTGATATTTGATTGGTT+TGG | - | chr3.3:64636782-64636801 | MS.gene35561:intron | 30.0% |
| ! | TTTTTATTCCATTTTACCCC+TGG | + | chr3.3:64636599-64636618 | None:intergenic | 30.0% |
| !! | ATGTTTTTGTGAAATTGTGG+AGG | - | chr3.3:64634948-64634967 | MS.gene35561:intron | 30.0% |
| !! | ATTGAATGACTTGGTTCTTA+TGG | - | chr3.3:64637321-64637340 | MS.gene35561:intron | 30.0% |
| !! | CACTTTTTGTTAGAAAGAGT+AGG | - | chr3.3:64638131-64638150 | MS.gene35561:intron | 30.0% |
| !! | CTTGCTTTTATATTCAAGGA+GGG | - | chr3.3:64635118-64635137 | MS.gene35561:intron | 30.0% |
| !! | GAAAAAAGTACTTACATCGT+TGG | + | chr3.3:64634767-64634786 | None:intergenic | 30.0% |
| !! | GGTATATTGTTTGCTATTGT+GGG | - | chr3.3:64636958-64636977 | MS.gene35561:intron | 30.0% |
| !! | TATTATGTTGATAGTGAAGG+AGG | - | chr3.3:64637668-64637687 | MS.gene35561:intron | 30.0% |
| !! | TCTTGCTTTTATATTCAAGG+AGG | - | chr3.3:64635117-64635136 | MS.gene35561:intron | 30.0% |
| !! | TGTTTTTGTGAAATTGTGGA+GGG | - | chr3.3:64634949-64634968 | MS.gene35561:intron | 30.0% |
| !! | TTGTTTTGTGTTTGGGATTT+TGG | - | chr3.3:64635032-64635051 | MS.gene35561:intron | 30.0% |
| !!! | AGGTATATTGTTTTTTGACC+AGG | - | chr3.3:64636578-64636597 | MS.gene35561:intron | 30.0% |
| !!! | GGTATATTGTTTTTTGACCA+GGG | - | chr3.3:64636579-64636598 | MS.gene35561:intron | 30.0% |
| !!! | GTATATTGTTTTTTGACCAG+GGG | - | chr3.3:64636580-64636599 | MS.gene35561:intron | 30.0% |
| !!! | TTAAAGGCACTGGAATTTTT+AGG | - | chr3.3:64636169-64636188 | MS.gene35561:intron | 30.0% |
| AAAAAATGGATGGAATGGGA+TGG | - | chr3.3:64635898-64635917 | MS.gene35561:intron | 35.0% | |
| AAAGGCAATAGATTCTCTGT+AGG | - | chr3.3:64637698-64637717 | MS.gene35561:intron | 35.0% | |
| AAATTACTTGTTCCGCTGTT+TGG | + | chr3.3:64636652-64636671 | None:intergenic | 35.0% | |
| AACAGTTATCATGTTTGGGA+TGG | + | chr3.3:64638179-64638198 | None:intergenic | 35.0% | |
| AAGCATATAAGATGGAAGGT+AGG | + | chr3.3:64635407-64635426 | None:intergenic | 35.0% | |
| AATAAGACATGCATACACGA+GGG | + | chr3.3:64637251-64637270 | None:intergenic | 35.0% | |
| AATAGATTCTCTGTAGGATC+TGG | - | chr3.3:64637704-64637723 | MS.gene35561:intron | 35.0% | |
| AATGTTCGCAAGTAACTTAG+AGG | + | chr3.3:64637493-64637512 | None:intergenic | 35.0% | |
| ACACTTAATATGAAACCAGC+AGG | + | chr3.3:64635477-64635496 | None:intergenic | 35.0% | |
| AGCTTACTCACACAATATTG+TGG | - | chr3.3:64635766-64635785 | MS.gene35561:intron | 35.0% | |
| AGTACTTACATCGTTGGAAT+TGG | + | chr3.3:64634761-64634780 | None:intergenic | 35.0% | |
| ATCTGTGCACGTGAATTTAT+AGG | - | chr3.3:64636300-64636319 | MS.gene35561:intron | 35.0% | |
| ATTAACCTTTAGGCTCTGTT+TGG | - | chr3.3:64635811-64635830 | MS.gene35561:intron | 35.0% | |
| CAAGAAGGTCATGTAAATGA+TGG | - | chr3.3:64635657-64635676 | MS.gene35561:CDS | 35.0% | |
| CAAGATTCCTATGCCAAAAT+TGG | + | chr3.3:64635367-64635386 | None:intergenic | 35.0% | |
| CAATATTGTGTGAGTAAGCT+TGG | + | chr3.3:64635766-64635785 | None:intergenic | 35.0% | |
| CCAACTAAAAAACATGTGAG+AGG | + | chr3.3:64638044-64638063 | None:intergenic | 35.0% | |
| CCTCTGTTAGGAATCAATTA+AGG | - | chr3.3:64635589-64635608 | MS.gene35561:intron | 35.0% | |
| GATAGATATAGCTGGTCAAT+AGG | + | chr3.3:64637964-64637983 | None:intergenic | 35.0% | |
| GTACTTACATCGTTGGAATT+GGG | + | chr3.3:64634760-64634779 | None:intergenic | 35.0% | |
| GTCGTATAATACCCAAACAA+TGG | - | chr3.3:64636682-64636701 | MS.gene35561:intron | 35.0% | |
| TAATAAGACATGCATACACG+AGG | + | chr3.3:64637252-64637271 | None:intergenic | 35.0% | |
| TAGATATAGCTGGTCAATAG+GGG | + | chr3.3:64637962-64637981 | None:intergenic | 35.0% | |
| TATCATGCAACATTTCGTGA+TGG | - | chr3.3:64637898-64637917 | MS.gene35561:intron | 35.0% | |
| TCAATGGAGAACAACAAACT+AGG | + | chr3.3:64636074-64636093 | None:intergenic | 35.0% | |
| TCAGATGAAATGGAATGGAA+TGG | - | chr3.3:64635844-64635863 | MS.gene35561:intron | 35.0% | |
| TCGTTTCAGATGAAATGGAA+TGG | - | chr3.3:64635839-64635858 | MS.gene35561:intron | 35.0% | |
| TGAAATGGAATGGAATGGAA+TGG | - | chr3.3:64635849-64635868 | MS.gene35561:intron | 35.0% | |
| TGAATCCTTGTAGATGGTAA+TGG | - | chr3.3:64637294-64637313 | MS.gene35561:intron | 35.0% | |
| TGAGTAAGCTTGGATTAAAG+TGG | + | chr3.3:64635756-64635775 | None:intergenic | 35.0% | |
| TTATACTCTTACCGTGGAAT+GGG | - | chr3.3:64637513-64637532 | MS.gene35561:intron | 35.0% | |
| TTATTCTGTTGCCTCTAACT+AGG | - | chr3.3:64638289-64638308 | MS.gene35561:intron | 35.0% | |
| TTCCATGTGAAATCAAAGAC+GGG | + | chr3.3:64634693-64634712 | None:intergenic | 35.0% | |
| TTGATGCTTGAAGTTATCGA+TGG | - | chr3.3:64634851-64634870 | MS.gene35561:intron | 35.0% | |
| TTTATACTCTTACCGTGGAA+TGG | - | chr3.3:64637512-64637531 | MS.gene35561:intron | 35.0% | |
| ! | AAACTACTGTCCAGTAGTTT+TGG | + | chr3.3:64637027-64637046 | None:intergenic | 35.0% |
| ! | AATAAGAGGAGAGTATGGAA+TGG | + | chr3.3:64635947-64635966 | None:intergenic | 35.0% |
| ! | ATTTTTCTTCCCCTCCAATT+TGG | - | chr3.3:64635964-64635983 | MS.gene35561:intron | 35.0% |
| ! | CAAATTTTCGCTACTAGCAA+GGG | + | chr3.3:64635504-64635523 | None:intergenic | 35.0% |
| ! | CCTTAATTGATTCCTAACAG+AGG | + | chr3.3:64635592-64635611 | None:intergenic | 35.0% |
| ! | CTGGACAGTAGTTTTTATTG+TGG | - | chr3.3:64637033-64637052 | MS.gene35561:intron | 35.0% |
| ! | GATGGGAATGTTAATGGTTT+TGG | - | chr3.3:64635675-64635694 | MS.gene35561:CDS | 35.0% |
| ! | TACAAATGGCTTTTCTGATG+TGG | - | chr3.3:64637402-64637421 | MS.gene35561:intron | 35.0% |
| ! | TGTTCTACACTACGTCATTT+TGG | - | chr3.3:64637359-64637378 | MS.gene35561:intron | 35.0% |
| ! | TTTTTCTTCCCCTCCAATTT+GGG | - | chr3.3:64635965-64635984 | MS.gene35561:intron | 35.0% |
| !! | CAATTTTGGCATAGGAATCT+TGG | - | chr3.3:64635365-64635384 | MS.gene35561:intron | 35.0% |
| !! | CGGTATATTGTTTGCTATTG+TGG | - | chr3.3:64636957-64636976 | MS.gene35561:intron | 35.0% |
| !! | TAAGGCTTTGTTTGGATTGA+CGG | + | chr3.3:64636758-64636777 | None:intergenic | 35.0% |
| !! | TAGAGCAAAAAGGCATTTAC+TGG | + | chr3.3:64637595-64637614 | None:intergenic | 35.0% |
| !! | TATATTCAAGGAGGGTGTTA+TGG | - | chr3.3:64635126-64635145 | MS.gene35561:intron | 35.0% |
| !!! | CCTCTCACATGTTTTTTAGT+TGG | - | chr3.3:64638041-64638060 | MS.gene35561:CDS | 35.0% |
| !!! | TGAATCTTTTTTTAGGGTCC+TGG | - | chr3.3:64637641-64637660 | MS.gene35561:intron | 35.0% |
| !!! | TTTTTTGACCAGGGGTAAAA+TGG | - | chr3.3:64636588-64636607 | MS.gene35561:intron | 35.0% |
| AAAAAGGCTGACCTAGTTAG+AGG | + | chr3.3:64638303-64638322 | None:intergenic | 40.0% | |
| AAGAGTTGTAGTACCCTTTG+CGG | + | chr3.3:64635101-64635120 | None:intergenic | 40.0% | |
| ACTCACTCGCACAACATATA+AGG | - | chr3.3:64638006-64638025 | MS.gene35561:intron | 40.0% | |
| AGTGAAGGAGGAAGACTAAA+AGG | - | chr3.3:64637680-64637699 | MS.gene35561:intron | 40.0% | |
| CAACAGATAATCCCATTCCA+CGG | + | chr3.3:64637527-64637546 | None:intergenic | 40.0% | |
| CACACACTGTGTCTCAAATA+AGG | + | chr3.3:64637004-64637023 | None:intergenic | 40.0% | |
| CAGAGCCTAAAGGTTAATCA+CGG | + | chr3.3:64635809-64635828 | None:intergenic | 40.0% | |
| CATGTCAATTGAGGAAGCTT+CGG | - | chr3.3:64637855-64637874 | MS.gene35561:CDS | 40.0% | |
| CTAATCCAAACAGAGCCTAA+AGG | + | chr3.3:64635819-64635838 | None:intergenic | 40.0% | |
| CTCACTCGCACAACATATAA+GGG | - | chr3.3:64638007-64638026 | MS.gene35561:intron | 40.0% | |
| CTTGACCGTGATTAACCTTT+AGG | - | chr3.3:64635801-64635820 | MS.gene35561:intron | 40.0% | |
| TATCTTAGTTAAGTGCCTGC+TGG | - | chr3.3:64635459-64635478 | MS.gene35561:CDS | 40.0% | |
| TCCAGTACACCATAAGCATA+TGG | + | chr3.3:64637734-64637753 | None:intergenic | 40.0% | |
| TGGAGACAGATAGATATAGC+TGG | + | chr3.3:64637972-64637991 | None:intergenic | 40.0% | |
| TGGAGGGGAAGAAAAATAAG+AGG | + | chr3.3:64635961-64635980 | None:intergenic | 40.0% | |
| TGTTTGGAAAGTGAACGGAA+TGG | + | chr3.3:64636636-64636655 | None:intergenic | 40.0% | |
| TTCTGTGCAACAAGACAATG+CGG | + | chr3.3:64636118-64636137 | None:intergenic | 40.0% | |
| TTTGGATTGACGGAACAGAA+CGG | + | chr3.3:64636748-64636767 | None:intergenic | 40.0% | |
| ! | AACAAAAAGTGAGGGTACAG+TGG | + | chr3.3:64638122-64638141 | None:intergenic | 40.0% |
| ! | AAGTTGTCTGGTGATGATGT+TGG | - | chr3.3:64638441-64638460 | MS.gene35561:CDS | 40.0% |
| ! | GCAAATTTTCGCTACTAGCA+AGG | + | chr3.3:64635505-64635524 | None:intergenic | 40.0% |
| ! | GCTTCCAGTGTTTTCAATCA+TGG | - | chr3.3:64637125-64637144 | MS.gene35561:intron | 40.0% |
| ! | TAACTAGGTCAGCCTTTTTG+CGG | - | chr3.3:64638304-64638323 | MS.gene35561:intron | 40.0% |
| ! | TTCCCGTCTTTGATTTCACA+TGG | - | chr3.3:64634688-64634707 | MS.gene35561:CDS | 40.0% |
| ! | TTGCTATTGTGGGTCTGTTT+GGG | - | chr3.3:64636968-64636987 | MS.gene35561:intron | 40.0% |
| !! | CTGATTGCCAATTTTGGCAT+AGG | - | chr3.3:64635357-64635376 | MS.gene35561:intron | 40.0% |
| !! | GTCAAGTCTAAGGCTTTGTT+TGG | + | chr3.3:64636766-64636785 | None:intergenic | 40.0% |
| !! | TGGGATTTTGGTAGTTCGAT+GGG | - | chr3.3:64635044-64635063 | MS.gene35561:intron | 40.0% |
| !! | TTGGGATTTTGGTAGTTCGA+TGG | - | chr3.3:64635043-64635062 | MS.gene35561:intron | 40.0% |
| !! | TTTGCTATTGTGGGTCTGTT+TGG | - | chr3.3:64636967-64636986 | MS.gene35561:intron | 40.0% |
| AAGGAGTGAAAAAAGTGGGG+AGG | - | chr3.3:64635608-64635627 | MS.gene35561:intron | 45.0% | |
| AATTGAGGAAGCTTCGGAAC+TGG | - | chr3.3:64637861-64637880 | MS.gene35561:CDS | 45.0% | |
| AATTGGGAAGCTGGAACGAT+GGG | + | chr3.3:64634744-64634763 | None:intergenic | 45.0% | |
| ACAGTGTGTGCCAAAACTAC+TGG | - | chr3.3:64637014-64637033 | MS.gene35561:intron | 45.0% | |
| ACTGGATGGAAGAAGTTGTC+TGG | - | chr3.3:64638429-64638448 | MS.gene35561:CDS | 45.0% | |
| AGAGTTGTAGTACCCTTTGC+GGG | + | chr3.3:64635100-64635119 | None:intergenic | 45.0% | |
| ATCAGTTAACCATGAGCGAG+AGG | + | chr3.3:64636896-64636915 | None:intergenic | 45.0% | |
| CAATACCTCCCAAATTGGAG+GGG | + | chr3.3:64635976-64635995 | None:intergenic | 45.0% | |
| CCAATACCTCCCAAATTGGA+GGG | + | chr3.3:64635977-64635996 | None:intergenic | 45.0% | |
| CCATCCAATACCTCCCAAAT+TGG | + | chr3.3:64635981-64636000 | None:intergenic | 45.0% | |
| CGTGGAATGGGATTATCTGT+TGG | - | chr3.3:64637525-64637544 | MS.gene35561:intron | 45.0% | |
| CTCAACCATTTCTTGCTCCA+CGG | + | chr3.3:64638505-64638524 | None:intergenic | 45.0% | |
| GACAACTTCTTCCATCCAGT+TGG | + | chr3.3:64638429-64638448 | None:intergenic | 45.0% | |
| GCATAGGAATCTTGGCATCA+AGG | - | chr3.3:64635373-64635392 | MS.gene35561:intron | 45.0% | |
| GCCATATGCTTATGGTGTAC+TGG | - | chr3.3:64637730-64637749 | MS.gene35561:intron | 45.0% | |
| GGAATGGGATGGAACATGAT+GGG | - | chr3.3:64635909-64635928 | MS.gene35561:intron | 45.0% | |
| GTATGTTTCGCAAACCCCAA+GGG | - | chr3.3:64635727-64635746 | MS.gene35561:CDS | 45.0% | |
| GTGAGTCAGCAACAAAATGC+TGG | + | chr3.3:64637992-64638011 | None:intergenic | 45.0% | |
| GTTTACTATGTGGGACCAAC+TGG | - | chr3.3:64638411-64638430 | MS.gene35561:intron | 45.0% | |
| TATTAAGGTCCTCTCGCTCA+TGG | - | chr3.3:64636884-64636903 | MS.gene35561:intron | 45.0% | |
| TCACATGGAATCAACGTTGC+TGG | - | chr3.3:64634703-64634722 | MS.gene35561:CDS | 45.0% | |
| TCCAATACCTCCCAAATTGG+AGG | + | chr3.3:64635978-64635997 | None:intergenic | 45.0% | |
| TCCGCTGTTTGGAAAGTGAA+CGG | + | chr3.3:64636641-64636660 | None:intergenic | 45.0% | |
| TCCGTTCACTTTCCAAACAG+CGG | - | chr3.3:64636637-64636656 | MS.gene35561:intron | 45.0% | |
| TCCTTACATGCTTGGCACAA+TGG | - | chr3.3:64635322-64635341 | MS.gene35561:CDS | 45.0% | |
| TCTGTGCAACAAGACAATGC+GGG | + | chr3.3:64636117-64636136 | None:intergenic | 45.0% | |
| TCTGTTGGTACCATGATTGC+TGG | - | chr3.3:64637540-64637559 | MS.gene35561:intron | 45.0% | |
| TGGAATGGGATGGAACATGA+TGG | - | chr3.3:64635908-64635927 | MS.gene35561:intron | 45.0% | |
| TGGTACCATGATTGCTGGAT+GGG | - | chr3.3:64637545-64637564 | MS.gene35561:intron | 45.0% | |
| TGTATGTTTCGCAAACCCCA+AGG | - | chr3.3:64635726-64635745 | MS.gene35561:CDS | 45.0% | |
| TGTGTATAGCTGCCGCAAAA+AGG | + | chr3.3:64638319-64638338 | None:intergenic | 45.0% | |
| TTGGATTGACGGAACAGAAC+GGG | + | chr3.3:64636747-64636766 | None:intergenic | 45.0% | |
| TTGGGGTAACTGGGTTGTAA+TGG | + | chr3.3:64638479-64638498 | None:intergenic | 45.0% | |
| TTGGTACCATGATTGCTGGA+TGG | - | chr3.3:64637544-64637563 | MS.gene35561:intron | 45.0% | |
| ! | GAGGAGAGTATGGAATGGAA+TGG | + | chr3.3:64635942-64635961 | None:intergenic | 45.0% |
| ! | GCTGATTCTCGTGCTAGTAT+GGG | - | chr3.3:64635154-64635173 | MS.gene35561:intron | 45.0% |
| ! | TCTGGTTCGCCATATGCTTA+TGG | - | chr3.3:64637722-64637741 | MS.gene35561:intron | 45.0% |
| !! | CCAATTTGGGAGGTATTGGA+TGG | - | chr3.3:64635978-64635997 | MS.gene35561:intron | 45.0% |
| !! | GTGCTGCTGATTGCCAATTT+TGG | - | chr3.3:64635351-64635370 | MS.gene35561:intron | 45.0% |
| !! | TGCTGATTCTCGTGCTAGTA+TGG | - | chr3.3:64635153-64635172 | MS.gene35561:intron | 45.0% |
| !!! | TATTTATCTATTTAAAATAA+GGG | - | chr3.3:64636424-64636443 | MS.gene35561:intron | 5.0% |
| ACTATGTGGGACCAACTGGA+TGG | - | chr3.3:64638415-64638434 | MS.gene35561:intron | 50.0% | |
| ACTGCAGCTTAGCCTCTGTT+AGG | - | chr3.3:64635577-64635596 | MS.gene35561:intron | 50.0% | |
| AGCTGGTCAATAGGGGAGAA+GGG | + | chr3.3:64637955-64637974 | None:intergenic | 50.0% | |
| ATTGACGGAACAGAACGGGT+CGG | + | chr3.3:64636743-64636762 | None:intergenic | 50.0% | |
| ATTGGGAAGCTGGAACGATG+GGG | + | chr3.3:64634743-64634762 | None:intergenic | 50.0% | |
| ATTTCTTGCTCCACGGTGCT+TGG | + | chr3.3:64638498-64638517 | None:intergenic | 50.0% | |
| CAAGAAATGGTTGAGGCAGC+TGG | - | chr3.3:64638510-64638529 | MS.gene35561:CDS | 50.0% | |
| CAGATGGTGAAACCCGCAAA+GGG | - | chr3.3:64635085-64635104 | MS.gene35561:intron | 50.0% | |
| CATCGTTGGAATTGGGAAGC+TGG | + | chr3.3:64634753-64634772 | None:intergenic | 50.0% | |
| CGTGGAGCAAGAAATGGTTG+AGG | - | chr3.3:64638503-64638522 | MS.gene35561:CDS | 50.0% | |
| CTCATCCCATCCAGCAATCA+TGG | + | chr3.3:64637553-64637572 | None:intergenic | 50.0% | |
| CTTATGGTGTACTGGACAGC+GGG | - | chr3.3:64637738-64637757 | MS.gene35561:intron | 50.0% | |
| GAATTGGGAAGCTGGAACGA+TGG | + | chr3.3:64634745-64634764 | None:intergenic | 50.0% | |
| GATTAAAGTGGCCTCCCTTG+GGG | + | chr3.3:64635744-64635763 | None:intergenic | 50.0% | |
| GATTCTCGTGCTAGTATGGG+AGG | - | chr3.3:64635157-64635176 | MS.gene35561:intron | 50.0% | |
| GATTGCTGGATGGGATGAGA+CGG | - | chr3.3:64637554-64637573 | MS.gene35561:intron | 50.0% | |
| GCCATTGTGCCAAGCATGTA+AGG | + | chr3.3:64635326-64635345 | None:intergenic | 50.0% | |
| GCTTATGGTGTACTGGACAG+CGG | - | chr3.3:64637737-64637756 | MS.gene35561:intron | 50.0% | |
| GGATTAAAGTGGCCTCCCTT+GGG | + | chr3.3:64635745-64635764 | None:intergenic | 50.0% | |
| GTGTGCTATGTGCAGGTCAA+TGG | + | chr3.3:64636090-64636109 | None:intergenic | 50.0% | |
| TACATGCTTGGCACAATGGC+TGG | - | chr3.3:64635326-64635345 | MS.gene35561:CDS | 50.0% | |
| TAGCTGGTCAATAGGGGAGA+AGG | + | chr3.3:64637956-64637975 | None:intergenic | 50.0% | |
| TCAGATGGTGAAACCCGCAA+AGG | - | chr3.3:64635084-64635103 | MS.gene35561:intron | 50.0% | |
| TGGATTAAAGTGGCCTCCCT+TGG | + | chr3.3:64635746-64635765 | None:intergenic | 50.0% | |
| TTCTTCCCCTCCAATTTGGG+AGG | - | chr3.3:64635968-64635987 | MS.gene35561:intron | 50.0% | |
| TTTCTTGCTCCACGGTGCTT+GGG | + | chr3.3:64638497-64638516 | None:intergenic | 50.0% | |
| ! | AAGCACCGTGGAGCAAGAAA+TGG | - | chr3.3:64638497-64638516 | MS.gene35561:CDS | 50.0% |
| ! | ACATTTCGTGATGGAGCCAG+TGG | - | chr3.3:64637907-64637926 | MS.gene35561:intron | 50.0% |
| ! | CCCTCCAATTTGGGAGGTAT+TGG | - | chr3.3:64635974-64635993 | MS.gene35561:intron | 50.0% |
| !! | GCAGTGTCGCTTGCATGAAT+TGG | - | chr3.3:64637437-64637456 | MS.gene35561:intron | 50.0% |
| ATGCTTGGCACAATGGCTGG+TGG | - | chr3.3:64635329-64635348 | MS.gene35561:CDS | 55.0% | |
| CGGAGCGGAATGAAACGGAA+TGG | + | chr3.3:64636723-64636742 | None:intergenic | 55.0% | |
| CGGGAATGATTCGAGAGCAG+TGG | + | chr3.3:64634674-64634693 | None:intergenic | 55.0% | |
| TGTTTCGCAAACCCCAAGGG+AGG | - | chr3.3:64635730-64635749 | MS.gene35561:CDS | 55.0% | |
| TTCTTGCTCCACGGTGCTTG+GGG | + | chr3.3:64638496-64638515 | None:intergenic | 55.0% | |
| TTGGGAAGCTGGAACGATGG+GGG | + | chr3.3:64634742-64634761 | None:intergenic | 55.0% | |
| ! | GGGAAGAGTGTGCTATGTGC+AGG | + | chr3.3:64636097-64636116 | None:intergenic | 55.0% |
| ! | TTTCGTGATGGAGCCAGTGG+TGG | - | chr3.3:64637910-64637929 | MS.gene35561:intron | 55.0% |
| !! | AAGCTTCGGAACTGGCTCGA+CGG | - | chr3.3:64637869-64637888 | MS.gene35561:CDS | 55.0% |
| ACCGCTAGCAACTCCACCAC+TGG | + | chr3.3:64637926-64637945 | None:intergenic | 60.0% | |
| CCACGGTGCTTGGGGTAACT+GGG | + | chr3.3:64638488-64638507 | None:intergenic | 60.0% | |
| CGGGTCGGAGCGGAATGAAA+CGG | + | chr3.3:64636728-64636747 | None:intergenic | 60.0% | |
| TCCACGGTGCTTGGGGTAAC+TGG | + | chr3.3:64638489-64638508 | None:intergenic | 60.0% | |
| ! | GCCAGTGGTGGAGTTGCTAG+CGG | - | chr3.3:64637922-64637941 | MS.gene35561:intron | 60.0% |
| !! | AGCTTCGGAACTGGCTCGAC+GGG | - | chr3.3:64637870-64637889 | MS.gene35561:CDS | 60.0% |
| CGGAACAGAACGGGTCGGAG+CGG | + | chr3.3:64636738-64636757 | None:intergenic | 65.0% | |
| ! | CCCAGTTACCCCAAGCACCG+TGG | - | chr3.3:64638485-64638504 | MS.gene35561:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 64634658 | 64638539 | 64634658 | ID=MS.gene35561 |
| chr3.3 | mRNA | 64634658 | 64638539 | 64634658 | ID=MS.gene35561.t1;Parent=MS.gene35561 |
| chr3.3 | exon | 64638426 | 64638539 | 64638426 | ID=MS.gene35561.t1.exon1;Parent=MS.gene35561.t1 |
| chr3.3 | CDS | 64638426 | 64638539 | 64638426 | ID=cds.MS.gene35561.t1;Parent=MS.gene35561.t1 |
| chr3.3 | exon | 64638010 | 64638139 | 64638010 | ID=MS.gene35561.t1.exon2;Parent=MS.gene35561.t1 |
| chr3.3 | CDS | 64638010 | 64638139 | 64638010 | ID=cds.MS.gene35561.t1;Parent=MS.gene35561.t1 |
| chr3.3 | exon | 64637803 | 64637909 | 64637803 | ID=MS.gene35561.t1.exon3;Parent=MS.gene35561.t1 |
| chr3.3 | CDS | 64637803 | 64637909 | 64637803 | ID=cds.MS.gene35561.t1;Parent=MS.gene35561.t1 |
| chr3.3 | exon | 64635622 | 64635756 | 64635622 | ID=MS.gene35561.t1.exon4;Parent=MS.gene35561.t1 |
| chr3.3 | CDS | 64635622 | 64635756 | 64635622 | ID=cds.MS.gene35561.t1;Parent=MS.gene35561.t1 |
| chr3.3 | exon | 64635438 | 64635541 | 64635438 | ID=MS.gene35561.t1.exon5;Parent=MS.gene35561.t1 |
| chr3.3 | CDS | 64635438 | 64635541 | 64635438 | ID=cds.MS.gene35561.t1;Parent=MS.gene35561.t1 |
| chr3.3 | exon | 64635254 | 64635354 | 64635254 | ID=MS.gene35561.t1.exon6;Parent=MS.gene35561.t1 |
| chr3.3 | CDS | 64635254 | 64635354 | 64635254 | ID=cds.MS.gene35561.t1;Parent=MS.gene35561.t1 |
| chr3.3 | exon | 64634658 | 64634785 | 64634658 | ID=MS.gene35561.t1.exon7;Parent=MS.gene35561.t1 |
| chr3.3 | CDS | 64634658 | 64634785 | 64634658 | ID=cds.MS.gene35561.t1;Parent=MS.gene35561.t1 |
| Gene Sequence |
| Protein sequence |
