Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71557.t1 | XP_003622316.1 | 98.9 | 271 | 3 | 0 | 1 | 271 | 1 | 271 | 1.10E-151 | 545.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71557.t1 | Q7DLS1 | 84.8 | 270 | 39 | 1 | 4 | 271 | 5 | 274 | 7.4e-136 | 484.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71557.t1 | G7L695 | 98.9 | 271 | 3 | 0 | 1 | 271 | 1 | 271 | 8.1e-152 | 545.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71557.t1 | MTR_7g032930 | 98.893 | 271 | 3 | 0 | 1 | 271 | 1 | 271 | 0.0 | 554 |
MS.gene71557.t1 | MTR_7g037830 | 97.048 | 271 | 8 | 0 | 1 | 271 | 1 | 271 | 0.0 | 548 |
MS.gene71557.t1 | MTR_3g109210 | 31.282 | 195 | 131 | 2 | 24 | 217 | 1 | 193 | 1.48e-28 | 109 |
MS.gene71557.t1 | MTR_3g089040 | 29.302 | 215 | 144 | 4 | 5 | 216 | 24 | 233 | 5.48e-18 | 81.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71557.t1 | AT5G40580 | 84.815 | 270 | 39 | 1 | 4 | 271 | 5 | 274 | 4.47e-179 | 494 |
MS.gene71557.t1 | AT5G40580 | 84.815 | 270 | 39 | 1 | 4 | 271 | 5 | 274 | 4.47e-179 | 494 |
MS.gene71557.t1 | AT3G27430 | 84.387 | 269 | 41 | 1 | 4 | 271 | 5 | 273 | 2.07e-177 | 489 |
MS.gene71557.t1 | AT5G40580 | 83.333 | 270 | 37 | 2 | 4 | 271 | 5 | 268 | 8.55e-173 | 478 |
MS.gene71557.t1 | AT5G40580 | 83.333 | 270 | 37 | 2 | 4 | 271 | 5 | 268 | 8.55e-173 | 478 |
MS.gene71557.t1 | AT3G27430 | 82.900 | 269 | 39 | 2 | 4 | 271 | 5 | 267 | 7.15e-171 | 473 |
MS.gene71557.t1 | AT3G27430 | 86.066 | 244 | 34 | 0 | 4 | 247 | 5 | 248 | 5.55e-166 | 460 |
MS.gene71557.t1 | AT4G31300 | 32.105 | 190 | 126 | 2 | 29 | 217 | 5 | 192 | 2.03e-28 | 108 |
MS.gene71557.t1 | AT4G31300 | 32.105 | 190 | 126 | 2 | 29 | 217 | 5 | 192 | 2.03e-28 | 108 |
MS.gene71557.t1 | AT4G31300 | 32.461 | 191 | 125 | 3 | 29 | 217 | 5 | 193 | 1.96e-27 | 106 |
MS.gene71557.t1 | AT3G26340 | 31.527 | 203 | 135 | 3 | 14 | 213 | 32 | 233 | 8.81e-20 | 86.7 |
MS.gene71557.t1 | AT1G13060 | 31.527 | 203 | 135 | 3 | 14 | 213 | 32 | 233 | 4.79e-19 | 84.7 |
MS.gene71557.t1 | AT1G13060 | 28.194 | 227 | 135 | 4 | 14 | 213 | 32 | 257 | 4.22e-14 | 71.2 |
MS.gene71557.t1 | AT1G13060 | 28.194 | 227 | 135 | 4 | 14 | 213 | 32 | 257 | 4.22e-14 | 71.2 |
MS.gene71557.t1 | AT1G53850 | 25.381 | 197 | 137 | 4 | 35 | 223 | 31 | 225 | 2.15e-11 | 62.8 |
MS.gene71557.t1 | AT1G53850 | 25.381 | 197 | 137 | 4 | 35 | 223 | 31 | 225 | 2.15e-11 | 62.8 |
Find 70 sgRNAs with CRISPR-Local
Find 410 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCAGGATGGTATCATTCT+TGG | 0.234558 | 7.3:+66771231 | MS.gene71557:intron |
TTGTGAGAAAATTCATTATA+TGG | 0.247284 | 7.3:+66771299 | MS.gene71557:CDS |
GTCTCAGCTGCATTAGTTCT+TGG | 0.249577 | 7.3:+66771705 | MS.gene71557:CDS |
TTGACGAAAGTACGGGGATT+TGG | 0.267931 | 7.3:-66773603 | None:intergenic |
CCATTTGCTACAATGGGATC+TGG | 0.384782 | 7.3:+66771892 | MS.gene71557:CDS |
AACAAAGATTACTCCTTTGA+AGG | 0.392977 | 7.3:+66776085 | MS.gene71557:CDS |
CTTGGTGGGGTTGACATCAC+TGG | 0.394539 | 7.3:+66771723 | MS.gene71557:CDS |
CAGCTGCATTAGTTCTTGGT+GGG | 0.399091 | 7.3:+66771709 | MS.gene71557:CDS |
ACCCTTCCATTTGCTACAAT+GGG | 0.407963 | 7.3:+66771886 | MS.gene71557:CDS |
ATCAGCGACAATGGGTCCTT+CGG | 0.416864 | 7.3:-66771271 | None:intergenic |
TTGGAGAATGTAAAGCCTCT+TGG | 0.424173 | 7.3:-66773627 | None:intergenic |
TTCTGAAACTCAACTTGAAA+AGG | 0.426945 | 7.3:-66771604 | None:intergenic |
GCTGATACAGAGGCTGTAAC+AGG | 0.429238 | 7.3:+66771357 | MS.gene71557:CDS |
CCAGATCCCATTGTAGCAAA+TGG | 0.434181 | 7.3:-66771892 | None:intergenic |
CTCTTGATTCTCTACCAGTA+TGG | 0.437817 | 7.3:-66771550 | None:intergenic |
CACCCTTCCATTTGCTACAA+TGG | 0.440530 | 7.3:+66771885 | MS.gene71557:CDS |
TCATTCTTGGAGCAGATACC+AGG | 0.440553 | 7.3:+66771244 | MS.gene71557:CDS |
CAACTACATCGCTACCATAC+TGG | 0.441368 | 7.3:+66771536 | MS.gene71557:CDS |
TGCTGGTATATTTAATGACT+TGG | 0.444353 | 7.3:+66773420 | MS.gene71557:CDS |
ATATTTAATGACTTGGGAAG+TGG | 0.453974 | 7.3:+66773427 | MS.gene71557:CDS |
AAGACAGGAACCACCATTGT+TGG | 0.458191 | 7.3:+66770601 | MS.gene71557:CDS |
AGGGACATAAGGAATATCTA+AGG | 0.462529 | 7.3:+66773568 | MS.gene71557:intron |
CTCTTGGATTGACGAAAGTA+CGG | 0.463690 | 7.3:-66773611 | None:intergenic |
AAATGATATGCTCGAAAAGA+AGG | 0.466920 | 7.3:+66770555 | MS.gene71557:CDS |
GATCTGGTGCAGAGAGATGA+AGG | 0.474218 | 7.3:+66773370 | MS.gene71557:intron |
AACATATATTGTTGTGGAGC+AGG | 0.476690 | 7.3:+66771327 | MS.gene71557:CDS |
ACTTCAACCTTCTCCTTCAA+AGG | 0.477866 | 7.3:-66776098 | None:intergenic |
TCAGCTGCATTAGTTCTTGG+TGG | 0.479300 | 7.3:+66771708 | MS.gene71557:CDS |
AATGGGTCCTTCGGTTGCCC+TGG | 0.483084 | 7.3:-66771262 | None:intergenic |
GTCTGTCGATCTTCCTCCCA+AGG | 0.486942 | 7.3:+66770504 | MS.gene71557:CDS |
GATTACTCCTTTGAAGGAGA+AGG | 0.487372 | 7.3:+66776091 | MS.gene71557:CDS |
ATCAAAACTGAACCCACCCT+TGG | 0.488867 | 7.3:-66770521 | None:intergenic |
TAATACTGCACAGGGACATA+AGG | 0.491575 | 7.3:+66773557 | MS.gene71557:intron |
GCCCCTACTTATTTGAAGAC+AGG | 0.500417 | 7.3:+66770586 | MS.gene71557:CDS |
GTCGATCTTCCTCCCAAGGG+TGG | 0.500772 | 7.3:+66770508 | MS.gene71557:CDS |
GTTCCTGTCTTCAAATAAGT+AGG | 0.504731 | 7.3:-66770589 | None:intergenic |
TTCCTGTCTTCAAATAAGTA+GGG | 0.522396 | 7.3:-66770588 | None:intergenic |
TCTTGGATTGACGAAAGTAC+GGG | 0.526036 | 7.3:-66773610 | None:intergenic |
GAACTAACAGTATGCAAATG+AGG | 0.526164 | 7.3:-66771747 | None:intergenic |
AGCTGCATTAGTTCTTGGTG+GGG | 0.528922 | 7.3:+66771710 | MS.gene71557:CDS |
GCTCCACAACAATATATGTT+GGG | 0.530455 | 7.3:-66771324 | None:intergenic |
AGTAATTGAAGCAGATGCTA+TGG | 0.538109 | 7.3:+66776118 | MS.gene71557:CDS |
TCAAAACTGAACCCACCCTT+GGG | 0.540612 | 7.3:-66770520 | None:intergenic |
TCGATCTTCCTCCCAAGGGT+GGG | 0.551349 | 7.3:+66770509 | MS.gene71557:CDS |
AGGCACTGCTGCTGATACAG+AGG | 0.563322 | 7.3:+66771347 | MS.gene71557:CDS |
GTTGTTGAGTCGATATGTGC+TGG | 0.563519 | 7.3:+66773403 | MS.gene71557:CDS |
ATCCCATTGTAGCAAATGGA+AGG | 0.564159 | 7.3:-66771888 | None:intergenic |
TGCTCCACAACAATATATGT+TGG | 0.572528 | 7.3:-66771325 | None:intergenic |
TCCTGTCTTCAAATAAGTAG+GGG | 0.589880 | 7.3:-66770587 | None:intergenic |
TGTATTTGAGTCTAAATACA+AGG | 0.590364 | 7.3:+66771933 | MS.gene71557:CDS |
GCTGGTATATTTAATGACTT+GGG | 0.600543 | 7.3:+66773421 | MS.gene71557:CDS |
TTAAACATCTGCAGTTACCA+AGG | 0.603702 | 7.3:+66771678 | MS.gene71557:intron |
AATGATATGCTCGAAAAGAA+GGG | 0.604225 | 7.3:+66770556 | MS.gene71557:CDS |
TCCCATTGTAGCAAATGGAA+GGG | 0.616474 | 7.3:-66771887 | None:intergenic |
AAGTACGGGGATTTGGCGTG+AGG | 0.621137 | 7.3:-66773596 | None:intergenic |
CTGGAAAACTAAACCAACAA+TGG | 0.623311 | 7.3:-66770614 | None:intergenic |
GCACCCAACATATATTGTTG+TGG | 0.626948 | 7.3:+66771321 | MS.gene71557:CDS |
TGTAGCAAATGGAAGGGTGT+CGG | 0.633335 | 7.3:-66771881 | None:intergenic |
CGTACTTTCGTCAATCCAAG+AGG | 0.636115 | 7.3:+66773612 | MS.gene71557:CDS |
AAACTGAACCCACCCTTGGG+AGG | 0.638200 | 7.3:-66770517 | None:intergenic |
GAAAACTAAACCAACAATGG+TGG | 0.640949 | 7.3:-66770611 | None:intergenic |
CTTGGATTGACGAAAGTACG+GGG | 0.645114 | 7.3:-66773609 | None:intergenic |
TCTGTCGATCTTCCTCCCAA+GGG | 0.651994 | 7.3:+66770505 | MS.gene71557:CDS |
GCAGATACCAGGGCAACCGA+AGG | 0.657427 | 7.3:+66771255 | MS.gene71557:CDS |
CATTCTTGGAGCAGATACCA+GGG | 0.666431 | 7.3:+66771245 | MS.gene71557:CDS |
GATTTGCAGATCTATCCACA+TGG | 0.670011 | 7.3:+66771853 | MS.gene71557:intron |
ATGCAGCTGAGACATGACCT+TGG | 0.674625 | 7.3:-66771695 | None:intergenic |
ATTTGCAGATCTATCCACAT+GGG | 0.677372 | 7.3:+66771854 | MS.gene71557:intron |
TGATGTTTGTGTGATAACCA+AGG | 0.711392 | 7.3:+66773459 | MS.gene71557:CDS |
AGGGTGTCGGTTGACCCATG+TGG | 0.717575 | 7.3:-66771868 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GTTATTATTATAATAAAGAA+GGG | + | chr7.3:66770978-66770997 | MS.gene71557:intron | 10.0% |
!! | TGTTATTATTATAATAAAGA+AGG | + | chr7.3:66770977-66770996 | MS.gene71557:intron | 10.0% |
!! | TTATTATTATAATAAAGAAG+GGG | + | chr7.3:66770979-66770998 | MS.gene71557:intron | 10.0% |
!!! | GAAAAATTATATTTGTTAAA+AGG | + | chr7.3:66774619-66774638 | MS.gene71557:intron | 10.0% |
!! | AATTATGTTCGAATATTTAA+TGG | - | chr7.3:66775790-66775809 | None:intergenic | 15.0% |
!! | AGTTTCTCTATTATAATAAT+CGG | - | chr7.3:66774102-66774121 | None:intergenic | 15.0% |
!! | ATTATGTTTAAGAATAACTA+GGG | - | chr7.3:66772260-66772279 | None:intergenic | 15.0% |
!! | GATATATATTTAAAAGTTAG+AGG | - | chr7.3:66774146-66774165 | None:intergenic | 15.0% |
!! | TATTATTATAATAAAGAAGG+GGG | + | chr7.3:66770980-66770999 | MS.gene71557:intron | 15.0% |
!!! | ATTTTTATATAATGAGAATG+AGG | - | chr7.3:66775534-66775553 | None:intergenic | 15.0% |
!!! | TATACATCAAAATTTTCATA+AGG | - | chr7.3:66776027-66776046 | None:intergenic | 15.0% |
!!! | TTAAGTTTTAGATATAGATT+AGG | + | chr7.3:66774488-66774507 | MS.gene71557:intron | 15.0% |
!!! | TTTTTATATAATGAGAATGA+GGG | - | chr7.3:66775533-66775552 | None:intergenic | 15.0% |
!!! | TTTTTTGCTAATAAAATTCA+GGG | + | chr7.3:66773920-66773939 | MS.gene71557:intron | 15.0% |
!!! | TTTTTTTGCTAATAAAATTC+AGG | + | chr7.3:66773919-66773938 | MS.gene71557:intron | 15.0% |
!! | AAAATAAATACTTCAGAGAA+TGG | - | chr7.3:66770684-66770703 | None:intergenic | 20.0% |
!! | AAGTGTAAGTAAACATATTA+AGG | + | chr7.3:66771963-66771982 | MS.gene71557:intron | 20.0% |
!! | AATGTTGGATAATTAGAATT+TGG | + | chr7.3:66774683-66774702 | MS.gene71557:intron | 20.0% |
!! | ATGAATTAATTCCTACATAA+AGG | + | chr7.3:66774436-66774455 | MS.gene71557:intron | 20.0% |
!! | CATATAAACAGATATAGATA+AGG | + | chr7.3:66774356-66774375 | MS.gene71557:intron | 20.0% |
!! | CTTAATATAAAGATGTAACA+TGG | - | chr7.3:66774950-66774969 | None:intergenic | 20.0% |
!! | GAAAAGAAACAGATATATAT+GGG | + | chr7.3:66772844-66772863 | MS.gene71557:intron | 20.0% |
!! | GATTATGTTTAAGAATAACT+AGG | - | chr7.3:66772261-66772280 | None:intergenic | 20.0% |
!! | GTAAAAAAGAAATCAGTAAA+AGG | - | chr7.3:66771055-66771074 | None:intergenic | 20.0% |
!! | TGAAAAGAAACAGATATATA+TGG | + | chr7.3:66772843-66772862 | MS.gene71557:intron | 20.0% |
!! | TTGTGAGAAAATTCATTATA+TGG | + | chr7.3:66771299-66771318 | MS.gene71557:CDS | 20.0% |
!!! | AACAAATATCTCATTTTCAA+TGG | - | chr7.3:66771486-66771505 | None:intergenic | 20.0% |
!!! | ATAGGAGAAAATAGAATTTT+AGG | + | chr7.3:66773887-66773906 | MS.gene71557:intron | 20.0% |
!!! | ATATACAATTGTTTTTGTTC+TGG | - | chr7.3:66774520-66774539 | None:intergenic | 20.0% |
!!! | GTTTAATTTGTCAAGTTTTT+TGG | + | chr7.3:66771180-66771199 | MS.gene71557:intron | 20.0% |
!!! | TATACAATTGTTTTTGTTCT+GGG | - | chr7.3:66774519-66774538 | None:intergenic | 20.0% |
!!! | TATTTGTTAAAAGGAAAATG+AGG | + | chr7.3:66774628-66774647 | MS.gene71557:intron | 20.0% |
!!! | TCTTATTTATCTCATAGATT+TGG | + | chr7.3:66775439-66775458 | MS.gene71557:intron | 20.0% |
!!! | TTGTAAGTTAAGTTAATTTG+TGG | + | chr7.3:66770883-66770902 | MS.gene71557:intron | 20.0% |
!!! | TTTCATCATTGTTTGATTTA+TGG | - | chr7.3:66772828-66772847 | None:intergenic | 20.0% |
! | AAAAAGAAATCAGTAAAAGG+AGG | - | chr7.3:66771052-66771071 | None:intergenic | 25.0% |
! | AAACAATTATTATTCAGACC+TGG | - | chr7.3:66770636-66770655 | None:intergenic | 25.0% |
! | AACAGTAGGTTTAATTATAC+GGG | + | chr7.3:66775381-66775400 | MS.gene71557:intron | 25.0% |
! | AATAGCTTCATAAAGGAATT+TGG | - | chr7.3:66775690-66775709 | None:intergenic | 25.0% |
! | ATAAAAGACTCATCAACATA+TGG | - | chr7.3:66775888-66775907 | None:intergenic | 25.0% |
! | ATAAACAAAATTGTACCTTC+TGG | + | chr7.3:66771087-66771106 | MS.gene71557:intron | 25.0% |
! | ATGACAAAATCCTTTAATAG+CGG | + | chr7.3:66772624-66772643 | MS.gene71557:intron | 25.0% |
! | ATTTGGAAGTCATATTAAGA+AGG | - | chr7.3:66774267-66774286 | None:intergenic | 25.0% |
! | CAACAGTAGGTTTAATTATA+CGG | + | chr7.3:66775380-66775399 | MS.gene71557:intron | 25.0% |
! | CCTGAAGAAAATTTATTTGT+GGG | - | chr7.3:66771218-66771237 | None:intergenic | 25.0% |
! | GAAAAATAAACATGAAGAGT+CGG | - | chr7.3:66775965-66775984 | None:intergenic | 25.0% |
! | GAAACAAAATAGCTTCATAA+AGG | - | chr7.3:66775697-66775716 | None:intergenic | 25.0% |
! | TAAACTTTACAATCAGTGTT+TGG | - | chr7.3:66770770-66770789 | None:intergenic | 25.0% |
! | TACAAAATGTTGTTAAACAG+CGG | + | chr7.3:66773767-66773786 | MS.gene71557:intron | 25.0% |
! | TACAACAACAATAAATGCAA+AGG | - | chr7.3:66772907-66772926 | None:intergenic | 25.0% |
! | TACATAAAGGTTACAGATAT+GGG | + | chr7.3:66774449-66774468 | MS.gene71557:intron | 25.0% |
! | TATATGTTTATCTGTTACAG+AGG | + | chr7.3:66776055-66776074 | MS.gene71557:intron | 25.0% |
! | TATTATCAAGGATACGAAAT+TGG | - | chr7.3:66774234-66774253 | None:intergenic | 25.0% |
! | TATTGTTTAATCAGCAAGAA+GGG | - | chr7.3:66775993-66776012 | None:intergenic | 25.0% |
! | TCCTGAAGAAAATTTATTTG+TGG | - | chr7.3:66771219-66771238 | None:intergenic | 25.0% |
! | TCTACATTAAGTATCACTAA+GGG | + | chr7.3:66773114-66773133 | MS.gene71557:intron | 25.0% |
! | TGGTTTATATTGAATTGGAT+TGG | - | chr7.3:66772779-66772798 | None:intergenic | 25.0% |
! | TGTATTTGAGTCTAAATACA+AGG | + | chr7.3:66771933-66771952 | MS.gene71557:CDS | 25.0% |
! | TTGGAATAATGACATTAGAT+AGG | - | chr7.3:66773050-66773069 | None:intergenic | 25.0% |
! | TTGTTGGAAAGAAAAAGATT+TGG | + | chr7.3:66774411-66774430 | MS.gene71557:intron | 25.0% |
! | TTTGGAAGTCATATTAAGAA+GGG | - | chr7.3:66774266-66774285 | None:intergenic | 25.0% |
!! | AACAACATTTTGTACCATAA+GGG | - | chr7.3:66773761-66773780 | None:intergenic | 25.0% |
!! | ACTATCTCTGTAACATTTTA+TGG | - | chr7.3:66773702-66773721 | None:intergenic | 25.0% |
!! | AGATTTCACAAACCATTTTA+TGG | - | chr7.3:66775245-66775264 | None:intergenic | 25.0% |
!! | ATCTTTTTCTTTCCAACAAT+AGG | - | chr7.3:66774410-66774429 | None:intergenic | 25.0% |
!! | CAAATAAATTTTCTTCAGGA+TGG | + | chr7.3:66771219-66771238 | MS.gene71557:intron | 25.0% |
!! | CTATTAAAGGATTTTGTCAT+TGG | - | chr7.3:66772624-66772643 | None:intergenic | 25.0% |
!! | TAACAACATTTTGTACCATA+AGG | - | chr7.3:66773762-66773781 | None:intergenic | 25.0% |
!! | TATTGTTGTTGTAAACTATG+TGG | + | chr7.3:66772914-66772933 | MS.gene71557:intron | 25.0% |
!! | TTATTTGGAATTCATACAGT+TGG | + | chr7.3:66771805-66771824 | MS.gene71557:intron | 25.0% |
!! | TTCTTGCTGATTAAACAATA+CGG | + | chr7.3:66775993-66776012 | MS.gene71557:intron | 25.0% |
!!! | ACTGACTTTTATCGATAATA+TGG | + | chr7.3:66772140-66772159 | MS.gene71557:intron | 25.0% |
!!! | AGTTAAGTTAATTTGTGGTA+AGG | + | chr7.3:66770888-66770907 | MS.gene71557:intron | 25.0% |
!!! | ATACAATTGTTTTTGTTCTG+GGG | - | chr7.3:66774518-66774537 | None:intergenic | 25.0% |
!!! | ATGTAGCTTTGTGTATTATT+TGG | - | chr7.3:66775721-66775740 | None:intergenic | 25.0% |
!!! | ATTTGTTATTATTGCAGACA+TGG | + | chr7.3:66771499-66771518 | MS.gene71557:intron | 25.0% |
!!! | ATTTTTCAGCCTTTTAAAAC+AGG | + | chr7.3:66775198-66775217 | MS.gene71557:intron | 25.0% |
!!! | GGTTTGTTATTTTTATTGTG+TGG | + | chr7.3:66770824-66770843 | MS.gene71557:intron | 25.0% |
!!! | TATTATCCTAGTTTTTCCAT+TGG | + | chr7.3:66773836-66773855 | MS.gene71557:intron | 25.0% |
!!! | TGATTCATTTTGACATGTTA+TGG | + | chr7.3:66774541-66774560 | MS.gene71557:intron | 25.0% |
!!! | TTGCTATAAACATTTTGATC+TGG | + | chr7.3:66773354-66773373 | MS.gene71557:intron | 25.0% |
AAAAACATCTCTACAATGGT+TGG | - | chr7.3:66774919-66774938 | None:intergenic | 30.0% | |
AAAACCGACACAATAATATG+AGG | + | chr7.3:66772384-66772403 | MS.gene71557:intron | 30.0% | |
AAATGATATGCTCGAAAAGA+AGG | + | chr7.3:66770555-66770574 | MS.gene71557:CDS | 30.0% | |
AACAAAGATTACTCCTTTGA+AGG | + | chr7.3:66776085-66776104 | MS.gene71557:CDS | 30.0% | |
AAGAAACAGATATATATGGG+TGG | + | chr7.3:66772847-66772866 | MS.gene71557:intron | 30.0% | |
AAGTCTGATGTATATCATCT+AGG | - | chr7.3:66775918-66775937 | None:intergenic | 30.0% | |
AATGATATGCTCGAAAAGAA+GGG | + | chr7.3:66770556-66770575 | MS.gene71557:CDS | 30.0% | |
AATTATAGTGTATTTCCTCC+AGG | - | chr7.3:66773262-66773281 | None:intergenic | 30.0% | |
ACAAAGCTACATAACATGTT+GGG | + | chr7.3:66775729-66775748 | MS.gene71557:intron | 30.0% | |
ACTCGAACTCAAATTTATGA+AGG | - | chr7.3:66771028-66771047 | None:intergenic | 30.0% | |
AGAAACAGATATATATGGGT+GGG | + | chr7.3:66772848-66772867 | MS.gene71557:intron | 30.0% | |
AGTAGTTTAAGAAGTCTCAA+GGG | - | chr7.3:66772947-66772966 | None:intergenic | 30.0% | |
ATATAAAGATGTAACATGGC+AGG | - | chr7.3:66774946-66774965 | None:intergenic | 30.0% | |
ATATACATCAGACTTTCAGA+AGG | + | chr7.3:66775923-66775942 | MS.gene71557:intron | 30.0% | |
ATGAAATGGATCACATTTAC+TGG | + | chr7.3:66775148-66775167 | MS.gene71557:intron | 30.0% | |
ATGTTTAAGAATAACTAGGG+AGG | - | chr7.3:66772257-66772276 | None:intergenic | 30.0% | |
ATTATAATAAAGAAGGGGGT+CGG | + | chr7.3:66770984-66771003 | MS.gene71557:intron | 30.0% | |
ATTGAAGTTACAAACACCAT+CGG | - | chr7.3:66773298-66773317 | None:intergenic | 30.0% | |
CAAGCTTTCCTATAGTTAAT+TGG | - | chr7.3:66774829-66774848 | None:intergenic | 30.0% | |
CAGATATAGATAAGGACAAT+AGG | + | chr7.3:66774364-66774383 | MS.gene71557:intron | 30.0% | |
CATATCTGTAACCTTTATGT+AGG | - | chr7.3:66774450-66774469 | None:intergenic | 30.0% | |
CATTGTTTAATCACTCTATC+AGG | - | chr7.3:66772491-66772510 | None:intergenic | 30.0% | |
CGTATAATTAAACCTACTGT+TGG | - | chr7.3:66775382-66775401 | None:intergenic | 30.0% | |
CTACATAAAGGTTACAGATA+TGG | + | chr7.3:66774448-66774467 | MS.gene71557:intron | 30.0% | |
CTCTACATTAAGTATCACTA+AGG | + | chr7.3:66773113-66773132 | MS.gene71557:intron | 30.0% | |
CTTAGTGATACTTAATGTAG+AGG | - | chr7.3:66773115-66773134 | None:intergenic | 30.0% | |
GCTGGTATATTTAATGACTT+GGG | + | chr7.3:66773421-66773440 | MS.gene71557:CDS | 30.0% | |
GGATAAAAACATCTCTACAA+TGG | - | chr7.3:66774923-66774942 | None:intergenic | 30.0% | |
GGTTGTGGTTTATATTGAAT+TGG | - | chr7.3:66772784-66772803 | None:intergenic | 30.0% | |
GTATTGTTTAATCAGCAAGA+AGG | - | chr7.3:66775994-66776013 | None:intergenic | 30.0% | |
TAATCACTCTATCAGGATAT+GGG | - | chr7.3:66772484-66772503 | None:intergenic | 30.0% | |
TAGTAGTTTAAGAAGTCTCA+AGG | - | chr7.3:66772948-66772967 | None:intergenic | 30.0% | |
TATAAAGATGTAACATGGCA+GGG | - | chr7.3:66774945-66774964 | None:intergenic | 30.0% | |
TCATATTAAGAAGGGTTAAG+AGG | - | chr7.3:66774258-66774277 | None:intergenic | 30.0% | |
TCTCTATGAAAGTTTGCATA+TGG | + | chr7.3:66771424-66771443 | MS.gene71557:intron | 30.0% | |
TGCTGGTATATTTAATGACT+TGG | + | chr7.3:66773420-66773439 | MS.gene71557:CDS | 30.0% | |
TGTTTAAGAATAACTAGGGA+GGG | - | chr7.3:66772256-66772275 | None:intergenic | 30.0% | |
TTAATCACTCTATCAGGATA+TGG | - | chr7.3:66772485-66772504 | None:intergenic | 30.0% | |
TTATAATAATCGGCCATGTT+TGG | - | chr7.3:66774092-66774111 | None:intergenic | 30.0% | |
TTATCATGAGTTCATGAAGT+GGG | + | chr7.3:66770723-66770742 | MS.gene71557:intron | 30.0% | |
TTCCTGTCTTCAAATAAGTA+GGG | - | chr7.3:66770591-66770610 | None:intergenic | 30.0% | |
TTTACATTCTCCAAAAAGAC+TGG | + | chr7.3:66773636-66773655 | MS.gene71557:CDS | 30.0% | |
TTTATCATGAGTTCATGAAG+TGG | + | chr7.3:66770722-66770741 | MS.gene71557:intron | 30.0% | |
! | AATCATGTGAAGGGTAATTT+TGG | - | chr7.3:66773069-66773088 | None:intergenic | 30.0% |
! | ACAATTTTTATCAGCGACAA+TGG | - | chr7.3:66771283-66771302 | None:intergenic | 30.0% |
! | AGCCATGACTTCTTTTAAAT+AGG | - | chr7.3:66775465-66775484 | None:intergenic | 30.0% |
! | AGTGAACATTTTGAATTGGA+TGG | - | chr7.3:66772081-66772100 | None:intergenic | 30.0% |
! | ATATTTAATGACTTGGGAAG+TGG | + | chr7.3:66773427-66773446 | MS.gene71557:CDS | 30.0% |
! | CAATTTTTATCAGCGACAAT+GGG | - | chr7.3:66771282-66771301 | None:intergenic | 30.0% |
! | CATGTTTTCATGCCATAAAA+TGG | + | chr7.3:66775230-66775249 | MS.gene71557:intron | 30.0% |
! | CCCACAAATAAATTTTCTTC+AGG | + | chr7.3:66771215-66771234 | MS.gene71557:intron | 30.0% |
! | GTACAGTGAACATTTTGAAT+TGG | - | chr7.3:66772085-66772104 | None:intergenic | 30.0% |
! | GTGAACATTTTGAATTGGAT+GGG | - | chr7.3:66772080-66772099 | None:intergenic | 30.0% |
! | TACAAAAAAGCATGTGGAAT+GGG | - | chr7.3:66771147-66771166 | None:intergenic | 30.0% |
! | TTACAAAAAAGCATGTGGAA+TGG | - | chr7.3:66771148-66771167 | None:intergenic | 30.0% |
! | TTGTTTGATTTATGGCTTCT+AGG | - | chr7.3:66772820-66772839 | None:intergenic | 30.0% |
! | TTTTATTGTGTGGCATTCTA+GGG | + | chr7.3:66770834-66770853 | MS.gene71557:intron | 30.0% |
! | TTTTCTATACAGCACAATGT+GGG | - | chr7.3:66772043-66772062 | None:intergenic | 30.0% |
! | TTTTTATTGTGTGGCATTCT+AGG | + | chr7.3:66770833-66770852 | MS.gene71557:intron | 30.0% |
!! | TAAGTTAATTTGTGGTAAGG+AGG | + | chr7.3:66770891-66770910 | MS.gene71557:intron | 30.0% |
!! | TTCTGAAACTCAACTTGAAA+AGG | - | chr7.3:66771607-66771626 | None:intergenic | 30.0% |
!! | TTTCCAATGCCTGTTTTAAA+AGG | - | chr7.3:66775210-66775229 | None:intergenic | 30.0% |
AAATAAGAACACAGAAGTCG+AGG | - | chr7.3:66775427-66775446 | None:intergenic | 35.0% | |
AAATAATCACCCTGTTCTCT+AGG | + | chr7.3:66772431-66772450 | MS.gene71557:intron | 35.0% | |
AACAACCAACACACAGATTA+AGG | - | chr7.3:66773220-66773239 | None:intergenic | 35.0% | |
AACACACAGATTAAGGATGT+TGG | - | chr7.3:66773213-66773232 | None:intergenic | 35.0% | |
AACATATATTGTTGTGGAGC+AGG | + | chr7.3:66771327-66771346 | MS.gene71557:CDS | 35.0% | |
AACATCCTTAATCTGTGTGT+TGG | + | chr7.3:66773212-66773231 | MS.gene71557:intron | 35.0% | |
AACTGTTATTCACATCCACT+TGG | + | chr7.3:66775324-66775343 | MS.gene71557:intron | 35.0% | |
AAGCTCTCTAATTCCTTGTA+GGG | - | chr7.3:66772226-66772245 | None:intergenic | 35.0% | |
AATATGACTTCCAAATCTCG+CGG | + | chr7.3:66774271-66774290 | MS.gene71557:intron | 35.0% | |
ACTGTACTTCTGTTAGAAAC+CGG | + | chr7.3:66772098-66772117 | MS.gene71557:intron | 35.0% | |
ACTTAACACGTCAAGCTATA+AGG | - | chr7.3:66774660-66774679 | None:intergenic | 35.0% | |
ACTTGGAGAACTAGATTACT+AGG | - | chr7.3:66775015-66775034 | None:intergenic | 35.0% | |
AGAGAACAGGGTGATTATTT+GGG | - | chr7.3:66772431-66772450 | None:intergenic | 35.0% | |
AGGGACATAAGGAATATCTA+AGG | + | chr7.3:66773568-66773587 | MS.gene71557:intron | 35.0% | |
AGTAATTGAAGCAGATGCTA+TGG | + | chr7.3:66776118-66776137 | MS.gene71557:CDS | 35.0% | |
AGTGAAACATGAGAATTTCC+TGG | + | chr7.3:66772517-66772536 | MS.gene71557:intron | 35.0% | |
ATAAAGATGTAACATGGCAG+GGG | - | chr7.3:66774944-66774963 | None:intergenic | 35.0% | |
ATAAGGACAATAGGATGAGT+AGG | + | chr7.3:66774373-66774392 | MS.gene71557:intron | 35.0% | |
ATGAGATGTGCACAATTTGA+TGG | - | chr7.3:66775617-66775636 | None:intergenic | 35.0% | |
ATGAGTGAACTTGAACGTAT+AGG | + | chr7.3:66775173-66775192 | MS.gene71557:intron | 35.0% | |
ATTCTTCGTTAATACTGCAC+AGG | + | chr7.3:66773548-66773567 | MS.gene71557:intron | 35.0% | |
ATTGTTGTAATTGATGCCGA+TGG | + | chr7.3:66773279-66773298 | MS.gene71557:intron | 35.0% | |
ATTTGCAGATCTATCCACAT+GGG | + | chr7.3:66771854-66771873 | MS.gene71557:intron | 35.0% | |
CACAAAGCTACATAACATGT+TGG | + | chr7.3:66775728-66775747 | MS.gene71557:intron | 35.0% | |
CAGACCTCATATTATTGTGT+CGG | - | chr7.3:66772391-66772410 | None:intergenic | 35.0% | |
CTAGTCCAAACATAGTCTAT+TGG | - | chr7.3:66774759-66774778 | None:intergenic | 35.0% | |
CTCTATAGTGACTTGAAACA+TGG | + | chr7.3:66770803-66770822 | MS.gene71557:intron | 35.0% | |
CTGGAAAACTAAACCAACAA+TGG | - | chr7.3:66770617-66770636 | None:intergenic | 35.0% | |
CTTGGAGAACTAGATTACTA+GGG | - | chr7.3:66775014-66775033 | None:intergenic | 35.0% | |
CTTGTCTTGAATCATGTGAA+GGG | - | chr7.3:66773078-66773097 | None:intergenic | 35.0% | |
GAAAACTAAACCAACAATGG+TGG | - | chr7.3:66770614-66770633 | None:intergenic | 35.0% | |
GAAACTCCAATGGAAAAACT+AGG | - | chr7.3:66773845-66773864 | None:intergenic | 35.0% | |
GAAATGAAGTAGATGCTTGT+TGG | + | chr7.3:66774861-66774880 | MS.gene71557:intron | 35.0% | |
GAACACAATACATTTGACAG+AGG | - | chr7.3:66772982-66773001 | None:intergenic | 35.0% | |
GAACTAACAGTATGCAAATG+AGG | - | chr7.3:66771750-66771769 | None:intergenic | 35.0% | |
GACGTGTTAAGTATGAATGT+TGG | + | chr7.3:66774668-66774687 | MS.gene71557:intron | 35.0% | |
GACTCATCAACATATGGTTA+AGG | - | chr7.3:66775882-66775901 | None:intergenic | 35.0% | |
GCTAATAAAATTCAGGGTGA+GGG | + | chr7.3:66773926-66773945 | MS.gene71557:intron | 35.0% | |
GCTCCACAACAATATATGTT+GGG | - | chr7.3:66771327-66771346 | None:intergenic | 35.0% | |
GGAGATAGAAAGAGATGAAA+TGG | + | chr7.3:66775134-66775153 | MS.gene71557:intron | 35.0% | |
GGCCTATTTAAAAGAAGTCA+TGG | + | chr7.3:66775460-66775479 | MS.gene71557:intron | 35.0% | |
GGGTTAAGAGGTTATTATCA+AGG | - | chr7.3:66774246-66774265 | None:intergenic | 35.0% | |
GGTCTAACAACTTCCAATTA+GGG | + | chr7.3:66772743-66772762 | MS.gene71557:intron | 35.0% | |
GTCTAACAACTTCCAATTAG+GGG | + | chr7.3:66772744-66772763 | MS.gene71557:intron | 35.0% | |
GTGAATAACAGTTCCCTAAA+TGG | - | chr7.3:66775317-66775336 | None:intergenic | 35.0% | |
GTTCCTGTCTTCAAATAAGT+AGG | - | chr7.3:66770592-66770611 | None:intergenic | 35.0% | |
GTTGTTAGACCACATATCAA+TGG | - | chr7.3:66772734-66772753 | None:intergenic | 35.0% | |
GTTGTTGTAAACTATGTGGA+AGG | + | chr7.3:66772918-66772937 | MS.gene71557:intron | 35.0% | |
GTTTACAATAGTTCCCTACA+AGG | + | chr7.3:66772210-66772229 | MS.gene71557:intron | 35.0% | |
TAAGGACAATAGGATGAGTA+GGG | + | chr7.3:66774374-66774393 | MS.gene71557:intron | 35.0% | |
TAGACCACATATCAATGGAA+AGG | - | chr7.3:66772729-66772748 | None:intergenic | 35.0% | |
TAGAGAACAGGGTGATTATT+TGG | - | chr7.3:66772432-66772451 | None:intergenic | 35.0% | |
TAGCTTGGTCTAAATCAACT+TGG | - | chr7.3:66775032-66775051 | None:intergenic | 35.0% | |
TATCATGAGTTCATGAAGTG+GGG | + | chr7.3:66770724-66770743 | MS.gene71557:intron | 35.0% | |
TCCAAACATAGTCTATTGGT+GGG | - | chr7.3:66774755-66774774 | None:intergenic | 35.0% | |
TCCTGTCTTCAAATAAGTAG+GGG | - | chr7.3:66770590-66770609 | None:intergenic | 35.0% | |
TGACATTAGATAGGTCTAGT+AGG | - | chr7.3:66773041-66773060 | None:intergenic | 35.0% | |
TGAGTGAACTTGAACGTATA+GGG | + | chr7.3:66775174-66775193 | MS.gene71557:intron | 35.0% | |
TGATGTTTGTGTGATAACCA+AGG | + | chr7.3:66773459-66773478 | MS.gene71557:CDS | 35.0% | |
TGATTTATGGCTTCTAGGTT+TGG | - | chr7.3:66772815-66772834 | None:intergenic | 35.0% | |
TGCTAATAAAATTCAGGGTG+AGG | + | chr7.3:66773925-66773944 | MS.gene71557:intron | 35.0% | |
TGCTCCACAACAATATATGT+TGG | - | chr7.3:66771328-66771347 | None:intergenic | 35.0% | |
TGGGTATAACTAGTAGAGAT+TGG | + | chr7.3:66772867-66772886 | MS.gene71557:intron | 35.0% | |
TGGTCTAACAACTTCCAATT+AGG | + | chr7.3:66772742-66772761 | MS.gene71557:intron | 35.0% | |
TTAAACATCTGCAGTTACCA+AGG | + | chr7.3:66771678-66771697 | MS.gene71557:intron | 35.0% | |
TTATAATAAAGAAGGGGGTC+GGG | + | chr7.3:66770985-66771004 | MS.gene71557:intron | 35.0% | |
TTCTTCGTTAATACTGCACA+GGG | + | chr7.3:66773549-66773568 | MS.gene71557:intron | 35.0% | |
TTGCTTTAGTAACTTGGTAC+CGG | - | chr7.3:66772120-66772139 | None:intergenic | 35.0% | |
! | AACATTTTATGGCAGTCTCA+AGG | - | chr7.3:66773691-66773710 | None:intergenic | 35.0% |
! | ACATTTTATGGCAGTCTCAA+GGG | - | chr7.3:66773690-66773709 | None:intergenic | 35.0% |
! | AGTTTTTCCATTGGAGTTTC+TGG | + | chr7.3:66773845-66773864 | MS.gene71557:intron | 35.0% |
! | CAGAGTTACAAAAAAGCATG+TGG | - | chr7.3:66771153-66771172 | None:intergenic | 35.0% |
! | CTTTTCTATACAGCACAATG+TGG | - | chr7.3:66772044-66772063 | None:intergenic | 35.0% |
! | GGTTTGAAGCAACAAAAGTT+CGG | - | chr7.3:66775273-66775292 | None:intergenic | 35.0% |
! | GTCAGTTTGCTTTAGTAACT+TGG | - | chr7.3:66772126-66772145 | None:intergenic | 35.0% |
! | TCAGAACAAACCAGTCTTTT+TGG | - | chr7.3:66773649-66773668 | None:intergenic | 35.0% |
! | TTAAGGAAAATTAGCCTCCT+CGG | - | chr7.3:66775865-66775884 | None:intergenic | 35.0% |
!! | ACTAGATTACTAGGGTATTG+AGG | - | chr7.3:66775006-66775025 | None:intergenic | 35.0% |
!!! | CATTGTTGGTTTAGTTTTCC+AGG | + | chr7.3:66770615-66770634 | MS.gene71557:CDS | 35.0% |
!!! | CTTTTCTCTAGGACAGATAA+AGG | - | chr7.3:66775651-66775670 | None:intergenic | 35.0% |
AAGGACAATAGGATGAGTAG+GGG | + | chr7.3:66774375-66774394 | MS.gene71557:intron | 40.0% | |
AATCATCCTCACTTTCACTC+TGG | - | chr7.3:66775359-66775378 | None:intergenic | 40.0% | |
ACTTCAACCTTCTCCTTCAA+AGG | - | chr7.3:66776101-66776120 | None:intergenic | 40.0% | |
AGAACAGGGTGATTATTTGG+GGG | - | chr7.3:66772429-66772448 | None:intergenic | 40.0% | |
AGCTGATGTAGTGACAGTAT+AGG | + | chr7.3:66773869-66773888 | MS.gene71557:intron | 40.0% | |
AGGTTACAGATATGGGTGAT+TGG | + | chr7.3:66774456-66774475 | MS.gene71557:intron | 40.0% | |
AGTGAGTGTTTGATTGATGC+AGG | + | chr7.3:66774310-66774329 | MS.gene71557:intron | 40.0% | |
AGTTCCCTAAATGGTGTACA+TGG | - | chr7.3:66775308-66775327 | None:intergenic | 40.0% | |
ATAAACAGCAGAAGACTTGC+TGG | + | chr7.3:66775113-66775132 | MS.gene71557:intron | 40.0% | |
ATATGACTTCCAAATCTCGC+GGG | + | chr7.3:66774272-66774291 | MS.gene71557:intron | 40.0% | |
ATCCCATTGTAGCAAATGGA+AGG | - | chr7.3:66771891-66771910 | None:intergenic | 40.0% | |
ATTTACGTTTACCTCCCTCA+AGG | + | chr7.3:66774014-66774033 | MS.gene71557:intron | 40.0% | |
ATTTGCATGCATGCCAAACA+TGG | + | chr7.3:66774076-66774095 | MS.gene71557:intron | 40.0% | |
CAAGCTCTCTAATTCCTTGT+AGG | - | chr7.3:66772227-66772246 | None:intergenic | 40.0% | |
CCTTTAATAGCGGCGAATAA+AGG | + | chr7.3:66772634-66772653 | MS.gene71557:intron | 40.0% | |
CCTTTATTCGCCGCTATTAA+AGG | - | chr7.3:66772637-66772656 | None:intergenic | 40.0% | |
CTCTTGATTCTCTACCAGTA+TGG | - | chr7.3:66771553-66771572 | None:intergenic | 40.0% | |
CTCTTGGATTGACGAAAGTA+CGG | - | chr7.3:66773614-66773633 | None:intergenic | 40.0% | |
CTTCAGGATGGTATCATTCT+TGG | + | chr7.3:66771231-66771250 | MS.gene71557:intron | 40.0% | |
GAATCCTGTCAGTTGTTTGA+GGG | + | chr7.3:66773498-66773517 | MS.gene71557:intron | 40.0% | |
GAGAACAGGGTGATTATTTG+GGG | - | chr7.3:66772430-66772449 | None:intergenic | 40.0% | |
GATTTGCAGATCTATCCACA+TGG | + | chr7.3:66771853-66771872 | MS.gene71557:intron | 40.0% | |
GCACCCAACATATATTGTTG+TGG | + | chr7.3:66771321-66771340 | MS.gene71557:CDS | 40.0% | |
GCTTGTCTTGAATCATGTGA+AGG | - | chr7.3:66773079-66773098 | None:intergenic | 40.0% | |
GCTTTGCTTCTAATTTAGCC+TGG | + | chr7.3:66773241-66773260 | MS.gene71557:intron | 40.0% | |
GTCCAAACATAGTCTATTGG+TGG | - | chr7.3:66774756-66774775 | None:intergenic | 40.0% | |
TAAAATTCAGGGTGAGGGAA+TGG | + | chr7.3:66773931-66773950 | MS.gene71557:intron | 40.0% | |
TAATACTGCACAGGGACATA+AGG | + | chr7.3:66773557-66773576 | MS.gene71557:intron | 40.0% | |
TCAGAATCAGTGTGCATACA+AGG | - | chr7.3:66771653-66771672 | None:intergenic | 40.0% | |
TCAGACGGCCAATTAACTAT+AGG | + | chr7.3:66774818-66774837 | MS.gene71557:intron | 40.0% | |
TCAGCCTTTCCATTGATATG+TGG | + | chr7.3:66772722-66772741 | MS.gene71557:intron | 40.0% | |
TCCCATTGTAGCAAATGGAA+GGG | - | chr7.3:66771890-66771909 | None:intergenic | 40.0% | |
TCTGTCCTAGAGAAAAGTCA+AGG | + | chr7.3:66775654-66775673 | MS.gene71557:intron | 40.0% | |
TGCTCCATGTACACCATTTA+GGG | + | chr7.3:66775301-66775320 | MS.gene71557:intron | 40.0% | |
TGGATACAAACACCCCTAAT+TGG | - | chr7.3:66772759-66772778 | None:intergenic | 40.0% | |
TGTTTAATCAGCAAGAAGGG+TGG | - | chr7.3:66775990-66776009 | None:intergenic | 40.0% | |
TGTTTGGATACATCATCCCA+AGG | - | chr7.3:66770754-66770773 | None:intergenic | 40.0% | |
TTACACTCTGCATAAGATCC+AGG | - | chr7.3:66772538-66772557 | None:intergenic | 40.0% | |
TTGCTTCTAATTTAGCCTGG+AGG | + | chr7.3:66773244-66773263 | MS.gene71557:intron | 40.0% | |
TTGGAGAATGTAAAGCCTCT+TGG | - | chr7.3:66773630-66773649 | None:intergenic | 40.0% | |
! | ACCCTTCCATTTGCTACAAT+GGG | + | chr7.3:66771886-66771905 | MS.gene71557:CDS | 40.0% |
! | GATTACTCCTTTGAAGGAGA+AGG | + | chr7.3:66776091-66776110 | MS.gene71557:CDS | 40.0% |
! | TAAGGAAAATTAGCCTCCTC+GGG | - | chr7.3:66775864-66775883 | None:intergenic | 40.0% |
! | TAGTGTTAATTTGAAGCCCG+AGG | + | chr7.3:66775845-66775864 | MS.gene71557:intron | 40.0% |
! | TCTTGGATTGACGAAAGTAC+GGG | - | chr7.3:66773613-66773632 | None:intergenic | 40.0% |
! | TGGTACACAGCTTTTGTTCT+CGG | + | chr7.3:66774703-66774722 | MS.gene71557:intron | 40.0% |
!! | CTTTTGTTGCTTCAAACCCT+CGG | + | chr7.3:66775275-66775294 | MS.gene71557:intron | 40.0% |
!! | GGAAAGCTTGTTAATGACAG+AGG | + | chr7.3:66774839-66774858 | MS.gene71557:intron | 40.0% |
!! | TGATGATGGGGTGAACATTA+TGG | + | chr7.3:66772671-66772690 | MS.gene71557:intron | 40.0% |
!! | TTTTGTTGCTTCAAACCCTC+GGG | + | chr7.3:66775276-66775295 | MS.gene71557:intron | 40.0% |
!!! | CAGCCTTTTAAAACAGGCAT+TGG | + | chr7.3:66775204-66775223 | MS.gene71557:intron | 40.0% |
AACCCTTTGCCTAGAGAACA+GGG | - | chr7.3:66772443-66772462 | None:intergenic | 45.0% | |
AAGAATAACTAGGGAGGGAG+AGG | - | chr7.3:66772251-66772270 | None:intergenic | 45.0% | |
AAGACAGGAACCACCATTGT+TGG | + | chr7.3:66770601-66770620 | MS.gene71557:CDS | 45.0% | |
ACTCAGCTGCACTATTAGCT+TGG | - | chr7.3:66775047-66775066 | None:intergenic | 45.0% | |
AGCAGATGCTATGGAAGAGT+AGG | + | chr7.3:66776127-66776146 | MS.gene71557:CDS | 45.0% | |
AGGACAATAGGATGAGTAGG+GGG | + | chr7.3:66774376-66774395 | MS.gene71557:intron | 45.0% | |
ATAGCGGCGAATAAAGGACT+CGG | + | chr7.3:66772640-66772659 | MS.gene71557:intron | 45.0% | |
ATCAAAACTGAACCCACCCT+TGG | - | chr7.3:66770524-66770543 | None:intergenic | 45.0% | |
ATGCAGAGTGTAACAGCAGT+AGG | + | chr7.3:66772545-66772564 | MS.gene71557:intron | 45.0% | |
CAACTACATCGCTACCATAC+TGG | + | chr7.3:66771536-66771555 | MS.gene71557:CDS | 45.0% | |
CATGAAAAACAGACGCCAGA+AGG | - | chr7.3:66771105-66771124 | None:intergenic | 45.0% | |
CATGCAAATCCTTGGATCTC+AGG | - | chr7.3:66774065-66774084 | None:intergenic | 45.0% | |
CATTCTTGGAGCAGATACCA+GGG | + | chr7.3:66771245-66771264 | MS.gene71557:CDS | 45.0% | |
CCAGATCCCATTGTAGCAAA+TGG | - | chr7.3:66771895-66771914 | None:intergenic | 45.0% | |
CGTACTTTCGTCAATCCAAG+AGG | + | chr7.3:66773612-66773631 | MS.gene71557:CDS | 45.0% | |
CTGCTCCATGTACACCATTT+AGG | + | chr7.3:66775300-66775319 | MS.gene71557:intron | 45.0% | |
GAACAGGGTGATTATTTGGG+GGG | - | chr7.3:66772428-66772447 | None:intergenic | 45.0% | |
GAGAATGAGGGAGACGAAAA+TGG | - | chr7.3:66775521-66775540 | None:intergenic | 45.0% | |
GAGGTCAAGCATGTCAAAGA+TGG | - | chr7.3:66774987-66775006 | None:intergenic | 45.0% | |
GCCCACCAATAGACTATGTT+TGG | + | chr7.3:66774751-66774770 | MS.gene71557:intron | 45.0% | |
GCCCCTACTTATTTGAAGAC+AGG | + | chr7.3:66770586-66770605 | MS.gene71557:CDS | 45.0% | |
GGAATCCTGTCAGTTGTTTG+AGG | + | chr7.3:66773497-66773516 | MS.gene71557:intron | 45.0% | |
GGGGCAACTTAACCTATTGT+TGG | + | chr7.3:66774395-66774414 | MS.gene71557:intron | 45.0% | |
GTGAGGATGATTCCAACAGT+AGG | + | chr7.3:66775367-66775386 | MS.gene71557:intron | 45.0% | |
GTGTTTGATTGATGCAGGCT+TGG | + | chr7.3:66774315-66774334 | MS.gene71557:intron | 45.0% | |
GTTGTTGAGTCGATATGTGC+TGG | + | chr7.3:66773403-66773422 | MS.gene71557:CDS | 45.0% | |
TAACCCTTTGCCTAGAGAAC+AGG | - | chr7.3:66772444-66772463 | None:intergenic | 45.0% | |
TCAAAACTGAACCCACCCTT+GGG | - | chr7.3:66770523-66770542 | None:intergenic | 45.0% | |
TCAGCTACCAGAAACTCCAA+TGG | - | chr7.3:66773855-66773874 | None:intergenic | 45.0% | |
TCATTCTTGGAGCAGATACC+AGG | + | chr7.3:66771244-66771263 | MS.gene71557:CDS | 45.0% | |
TCTATCAGGATATGGGACCT+TGG | - | chr7.3:66772477-66772496 | None:intergenic | 45.0% | |
TGCTGGTGGTCTTCTTGAAT+AGG | - | chr7.3:66775594-66775613 | None:intergenic | 45.0% | |
TTGGCATGCATGCAAATCCT+TGG | - | chr7.3:66774073-66774092 | None:intergenic | 45.0% | |
TTTGCATATGGCTCGTCTCT+AGG | + | chr7.3:66771436-66771455 | MS.gene71557:intron | 45.0% | |
! | AGCTGCATTAGTTCTTGGTG+GGG | + | chr7.3:66771710-66771729 | MS.gene71557:CDS | 45.0% |
! | CACCCTTCCATTTGCTACAA+TGG | + | chr7.3:66771885-66771904 | MS.gene71557:CDS | 45.0% |
! | CAGCTGCATTAGTTCTTGGT+GGG | + | chr7.3:66771709-66771728 | MS.gene71557:CDS | 45.0% |
! | CCAAGGTTAGTTCCTAGATG+CGG | + | chr7.3:66773476-66773495 | MS.gene71557:intron | 45.0% |
! | CCATTTGCTACAATGGGATC+TGG | + | chr7.3:66771892-66771911 | MS.gene71557:CDS | 45.0% |
! | CTTGGATTGACGAAAGTACG+GGG | - | chr7.3:66773612-66773631 | None:intergenic | 45.0% |
! | GCTCTTTGTTTAGACAGTGC+AGG | + | chr7.3:66774891-66774910 | MS.gene71557:intron | 45.0% |
! | GTCTCAGCTGCATTAGTTCT+TGG | + | chr7.3:66771705-66771724 | MS.gene71557:CDS | 45.0% |
! | GTGGGCTAAAAAGCAAAACG+TGG | - | chr7.3:66774737-66774756 | None:intergenic | 45.0% |
! | TCAGCTGCATTAGTTCTTGG+TGG | + | chr7.3:66771708-66771727 | MS.gene71557:CDS | 45.0% |
! | TGCAGCCTTGACTTTTCTCT+AGG | - | chr7.3:66775662-66775681 | None:intergenic | 45.0% |
! | TGTAGCAAATGGAAGGGTGT+CGG | - | chr7.3:66771884-66771903 | None:intergenic | 45.0% |
! | TGTTAATTTGAAGCCCGAGG+AGG | + | chr7.3:66775848-66775867 | MS.gene71557:intron | 45.0% |
! | TTGACGAAAGTACGGGGATT+TGG | - | chr7.3:66773606-66773625 | None:intergenic | 45.0% |
! | TTTGTTGCTTCAAACCCTCG+GGG | + | chr7.3:66775277-66775296 | MS.gene71557:intron | 45.0% |
!! | CTTCTAGGTTTGGTGTTTGG+TGG | - | chr7.3:66772805-66772824 | None:intergenic | 45.0% |
!! | GGCTCAAAGAGCACTTACTA+AGG | + | chr7.3:66773990-66774009 | MS.gene71557:intron | 45.0% |
!! | TCACATCCACTTGGCTTTAG+AGG | + | chr7.3:66775333-66775352 | MS.gene71557:intron | 45.0% |
!! | TGGCTTCTAGGTTTGGTGTT+TGG | - | chr7.3:66772808-66772827 | None:intergenic | 45.0% |
!! | TGTGCACAATTTGATGGTGC+TGG | - | chr7.3:66775611-66775630 | None:intergenic | 45.0% |
!! | AATAAAACTTTAAATATTAA+AGG | - | chr7.3:66771787-66771806 | None:intergenic | 5.0% |
!!! | ATATTTAAAGTTTTATTATT+TGG | + | chr7.3:66771790-66771809 | MS.gene71557:intron | 5.0% |
!!! | TTTTTTTTTTACAATTATTA+AGG | - | chr7.3:66773186-66773205 | None:intergenic | 5.0% |
AATCCTTGGATCTCAGGTCC+CGG | - | chr7.3:66774059-66774078 | None:intergenic | 50.0% | |
ACTGACAGGATTCCGCATCT+AGG | - | chr7.3:66773491-66773510 | None:intergenic | 50.0% | |
AGATCTTCCCTGCCTTGGAT+TGG | - | chr7.3:66773967-66773986 | None:intergenic | 50.0% | |
AGCACCAATGACCGTTGTGA+GGG | - | chr7.3:66772601-66772620 | None:intergenic | 50.0% | |
AGGGTGATTATTTGGGGGGA+GGG | - | chr7.3:66772424-66772443 | None:intergenic | 50.0% | |
AGGGTTACACGAGTCTACCA+AGG | + | chr7.3:66772457-66772476 | MS.gene71557:intron | 50.0% | |
ATCAGCGACAATGGGTCCTT+CGG | - | chr7.3:66771274-66771293 | None:intergenic | 50.0% | |
ATGCAGCTGAGACATGACCT+TGG | - | chr7.3:66771698-66771717 | None:intergenic | 50.0% | |
CACCCTGTTCTCTAGGCAAA+GGG | + | chr7.3:66772438-66772457 | MS.gene71557:intron | 50.0% | |
CATGAAGTGGGGTCTTCCTT+GGG | + | chr7.3:66770735-66770754 | MS.gene71557:intron | 50.0% | |
CCAAGGCAGGGAAGATCTTA+GGG | + | chr7.3:66773969-66773988 | MS.gene71557:intron | 50.0% | |
CCGCATCTAGGAACTAACCT+TGG | - | chr7.3:66773479-66773498 | None:intergenic | 50.0% | |
CGTGTATAGTGCCACACACT+AGG | - | chr7.3:66773737-66773756 | None:intergenic | 50.0% | |
CTCGCGGGCATGAAACATTA+TGG | + | chr7.3:66774287-66774306 | MS.gene71557:intron | 50.0% | |
GATCTGGTGCAGAGAGATGA+AGG | + | chr7.3:66773370-66773389 | MS.gene71557:intron | 50.0% | |
GCATCCCTCAAACAACTGAC+AGG | - | chr7.3:66773505-66773524 | None:intergenic | 50.0% | |
GCTGATACAGAGGCTGTAAC+AGG | + | chr7.3:66771357-66771376 | MS.gene71557:CDS | 50.0% | |
GGCACTATACACGTCCCTTA+TGG | + | chr7.3:66773744-66773763 | MS.gene71557:intron | 50.0% | |
GGGGTGAACATTATGGTGCA+CGG | + | chr7.3:66772678-66772697 | MS.gene71557:intron | 50.0% | |
GGGTGAACATTATGGTGCAC+GGG | + | chr7.3:66772679-66772698 | MS.gene71557:intron | 50.0% | |
GTATAGTGCCACACACTAGG+CGG | - | chr7.3:66773734-66773753 | None:intergenic | 50.0% | |
GTCAATAACCGCCTAGTGTG+TGG | + | chr7.3:66773723-66773742 | MS.gene71557:intron | 50.0% | |
TAGAGGCCAGAGTGAAAGTG+AGG | + | chr7.3:66775350-66775369 | MS.gene71557:intron | 50.0% | |
TCACCCTGTTCTCTAGGCAA+AGG | + | chr7.3:66772437-66772456 | MS.gene71557:intron | 50.0% | |
TCATGAAGTGGGGTCTTCCT+TGG | + | chr7.3:66770734-66770753 | MS.gene71557:intron | 50.0% | |
TCCAAGGCAGGGAAGATCTT+AGG | + | chr7.3:66773968-66773987 | MS.gene71557:intron | 50.0% | |
TCTGTCGATCTTCCTCCCAA+GGG | + | chr7.3:66770505-66770524 | MS.gene71557:CDS | 50.0% | |
TGGAAAGGCTGAAGAGACCA+AGG | - | chr7.3:66772714-66772733 | None:intergenic | 50.0% | |
TGGAATGGGTGACTGCTTCA+TGG | - | chr7.3:66771133-66771152 | None:intergenic | 50.0% | |
TGTTTCATGCCCGCGAGATT+TGG | - | chr7.3:66774284-66774303 | None:intergenic | 50.0% | |
TTATGGTGCACGGGCATTCT+CGG | + | chr7.3:66772688-66772707 | MS.gene71557:intron | 50.0% | |
! | CACAGCTTTTGTTCTCGGTC+TGG | + | chr7.3:66774708-66774727 | MS.gene71557:intron | 50.0% |
!! | GCACAATTTGATGGTGCTGG+TGG | - | chr7.3:66775608-66775627 | None:intergenic | 50.0% |
!! | GGTTTGGTGTTTGGTGGTTG+TGG | - | chr7.3:66772799-66772818 | None:intergenic | 50.0% |
AAACTGAACCCACCCTTGGG+AGG | - | chr7.3:66770520-66770539 | None:intergenic | 55.0% | |
AAGTACGGGGATTTGGCGTG+AGG | - | chr7.3:66773599-66773618 | None:intergenic | 55.0% | |
ACCTCCCTCAAGGACACTAG+CGG | + | chr7.3:66774024-66774043 | MS.gene71557:intron | 55.0% | |
ACTCGGCAGCACGATGATGA+TGG | + | chr7.3:66772657-66772676 | MS.gene71557:intron | 55.0% | |
ATCCTTGGATCTCAGGTCCC+GGG | - | chr7.3:66774058-66774077 | None:intergenic | 55.0% | |
CACCAATGACCGTTGTGAGG+GGG | - | chr7.3:66772599-66772618 | None:intergenic | 55.0% | |
CAGGGTGATTATTTGGGGGG+AGG | - | chr7.3:66772425-66772444 | None:intergenic | 55.0% | |
CCCTAAGATCTTCCCTGCCT+TGG | - | chr7.3:66773972-66773991 | None:intergenic | 55.0% | |
CTCGGCAGCACGATGATGAT+GGG | + | chr7.3:66772658-66772677 | MS.gene71557:intron | 55.0% | |
CTTGGTGGGGTTGACATCAC+TGG | + | chr7.3:66771723-66771742 | MS.gene71557:CDS | 55.0% | |
GAGCACCAATGACCGTTGTG+AGG | - | chr7.3:66772602-66772621 | None:intergenic | 55.0% | |
GCACCAATGACCGTTGTGAG+GGG | - | chr7.3:66772600-66772619 | None:intergenic | 55.0% | |
GGGTGATTATTTGGGGGGAG+GGG | - | chr7.3:66772423-66772442 | None:intergenic | 55.0% | |
GGTGATTATTTGGGGGGAGG+GGG | - | chr7.3:66772422-66772441 | None:intergenic | 55.0% | |
GTCTGTCGATCTTCCTCCCA+AGG | + | chr7.3:66770504-66770523 | MS.gene71557:CDS | 55.0% | |
TCGATCTTCCTCCCAAGGGT+GGG | + | chr7.3:66770509-66770528 | MS.gene71557:CDS | 55.0% | |
! | AGGCACTGCTGCTGATACAG+AGG | + | chr7.3:66771347-66771366 | MS.gene71557:CDS | 55.0% |
! | TCGGCAGCACGATGATGATG+GGG | + | chr7.3:66772659-66772678 | MS.gene71557:intron | 55.0% |
!! | CTCTGGCCTCTAAAGCCAAG+TGG | - | chr7.3:66775342-66775361 | None:intergenic | 55.0% |
AACCCGGGACCTGAGATCCA+AGG | + | chr7.3:66774053-66774072 | MS.gene71557:intron | 60.0% | |
AAGCCCCGCTAGTGTCCTTG+AGG | - | chr7.3:66774032-66774051 | None:intergenic | 60.0% | |
AATGGGTCCTTCGGTTGCCC+TGG | - | chr7.3:66771265-66771284 | None:intergenic | 60.0% | |
ACACTAGCGGGGCTTGAACC+CGG | + | chr7.3:66774037-66774056 | MS.gene71557:intron | 60.0% | |
AGCCCCGCTAGTGTCCTTGA+GGG | - | chr7.3:66774031-66774050 | None:intergenic | 60.0% | |
AGCGCCTGTCGAAGGTCAGA+CGG | + | chr7.3:66774803-66774822 | MS.gene71557:intron | 60.0% | |
CAATGACCGTTGTGAGGGGG+TGG | - | chr7.3:66772596-66772615 | None:intergenic | 60.0% | |
CACCCCCTCACAACGGTCAT+TGG | + | chr7.3:66772594-66772613 | MS.gene71557:intron | 60.0% | |
CCTCCCTCAAGGACACTAGC+GGG | + | chr7.3:66774025-66774044 | MS.gene71557:intron | 60.0% | |
CTCCCTCAAGGACACTAGCG+GGG | + | chr7.3:66774026-66774045 | MS.gene71557:intron | 60.0% | |
GCAGATACCAGGGCAACCGA+AGG | + | chr7.3:66771255-66771274 | MS.gene71557:CDS | 60.0% | |
GCGTGTGCCAATCCAAGGCA+GGG | + | chr7.3:66773957-66773976 | MS.gene71557:intron | 60.0% | |
GGTGTGCGTGTGCCAATCCA+AGG | + | chr7.3:66773952-66773971 | MS.gene71557:intron | 60.0% | |
GTCGATCTTCCTCCCAAGGG+TGG | + | chr7.3:66770508-66770527 | MS.gene71557:CDS | 60.0% | |
TGCGTGTGCCAATCCAAGGC+AGG | + | chr7.3:66773956-66773975 | MS.gene71557:intron | 60.0% | |
TGTACATGGAGCAGCCCCGA+GGG | - | chr7.3:66775294-66775313 | None:intergenic | 60.0% | |
TTGGCCGTCTGACCTTCGAC+AGG | - | chr7.3:66774810-66774829 | None:intergenic | 60.0% | |
! | AGGGGGTGGCTGAGGTCTTT+TGG | - | chr7.3:66772582-66772601 | None:intergenic | 60.0% |
! | GGGTGGCTGAGGTCTTTTGG+TGG | - | chr7.3:66772579-66772598 | None:intergenic | 60.0% |
!! | AGGGTGTCGGTTGACCCATG+TGG | - | chr7.3:66771871-66771890 | None:intergenic | 60.0% |
CACTAGCGGGGCTTGAACCC+GGG | + | chr7.3:66774038-66774057 | MS.gene71557:intron | 65.0% | |
CCCGCTAGTGTCCTTGAGGG+AGG | - | chr7.3:66774028-66774047 | None:intergenic | 65.0% | |
CCTCAGCCACCCCCTCACAA+CGG | + | chr7.3:66772587-66772606 | MS.gene71557:intron | 65.0% | |
GTGTACATGGAGCAGCCCCG+AGG | - | chr7.3:66775295-66775314 | None:intergenic | 65.0% | |
TGCACGGGCATTCTCGGCCT+TGG | + | chr7.3:66772694-66772713 | MS.gene71557:intron | 65.0% | |
CCGTTGTGAGGGGGTGGCTG+AGG | - | chr7.3:66772590-66772609 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 66770496 | 66776148 | 66770496 | ID=MS.gene71557 |
chr7.3 | mRNA | 66770496 | 66776148 | 66770496 | ID=MS.gene71557.t1;Parent=MS.gene71557 |
chr7.3 | exon | 66770496 | 66770636 | 66770496 | ID=MS.gene71557.t1.exon1;Parent=MS.gene71557.t1 |
chr7.3 | CDS | 66770496 | 66770636 | 66770496 | ID=cds.MS.gene71557.t1;Parent=MS.gene71557.t1 |
chr7.3 | exon | 66771237 | 66771378 | 66771237 | ID=MS.gene71557.t1.exon2;Parent=MS.gene71557.t1 |
chr7.3 | CDS | 66771237 | 66771378 | 66771237 | ID=cds.MS.gene71557.t1;Parent=MS.gene71557.t1 |
chr7.3 | exon | 66771516 | 66771612 | 66771516 | ID=MS.gene71557.t1.exon3;Parent=MS.gene71557.t1 |
chr7.3 | CDS | 66771516 | 66771612 | 66771516 | ID=cds.MS.gene71557.t1;Parent=MS.gene71557.t1 |
chr7.3 | exon | 66771692 | 66771761 | 66771692 | ID=MS.gene71557.t1.exon4;Parent=MS.gene71557.t1 |
chr7.3 | CDS | 66771692 | 66771761 | 66771692 | ID=cds.MS.gene71557.t1;Parent=MS.gene71557.t1 |
chr7.3 | exon | 66771862 | 66771966 | 66771862 | ID=MS.gene71557.t1.exon5;Parent=MS.gene71557.t1 |
chr7.3 | CDS | 66771862 | 66771966 | 66771862 | ID=cds.MS.gene71557.t1;Parent=MS.gene71557.t1 |
chr7.3 | exon | 66773382 | 66773480 | 66773382 | ID=MS.gene71557.t1.exon6;Parent=MS.gene71557.t1 |
chr7.3 | CDS | 66773382 | 66773480 | 66773382 | ID=cds.MS.gene71557.t1;Parent=MS.gene71557.t1 |
chr7.3 | exon | 66773570 | 66773657 | 66773570 | ID=MS.gene71557.t1.exon7;Parent=MS.gene71557.t1 |
chr7.3 | CDS | 66773570 | 66773657 | 66773570 | ID=cds.MS.gene71557.t1;Parent=MS.gene71557.t1 |
chr7.3 | exon | 66776075 | 66776148 | 66776075 | ID=MS.gene71557.t1.exon8;Parent=MS.gene71557.t1 |
chr7.3 | CDS | 66776075 | 66776148 | 66776075 | ID=cds.MS.gene71557.t1;Parent=MS.gene71557.t1 |
Gene Sequence |
Protein sequence |