Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29798.t1 | XP_013460933.1 | 90.2 | 417 | 38 | 1 | 1 | 417 | 1 | 414 | 2.80E-218 | 767.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29798.t1 | Q68FP5 | 39.2 | 273 | 145 | 4 | 2 | 273 | 23 | 275 | 1.7e-43 | 178.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29798.t1 | A0A072UZJ7 | 90.2 | 417 | 38 | 1 | 1 | 417 | 1 | 414 | 2.0e-218 | 767.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene024701 | MS.gene29798 | PPI |
| MS.gene21679 | MS.gene29798 | PPI |
| MS.gene21951 | MS.gene29798 | PPI |
| MS.gene22289 | MS.gene29798 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29798.t1 | MTR_3g074980 | 94.724 | 417 | 19 | 2 | 1 | 417 | 1 | 414 | 0.0 | 821 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29798.t1 | AT4G24880 | 64.608 | 421 | 137 | 4 | 1 | 415 | 1 | 415 | 0.0 | 573 |
| MS.gene29798.t1 | AT4G24880 | 65.579 | 337 | 105 | 3 | 1 | 331 | 1 | 332 | 1.06e-164 | 466 |
Find 115 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGTTTAGTTCCAGTTTA+TGG | 0.130864 | 3.4:-73372120 | MS.gene29798:CDS |
| CTTTCCAAACCAGGTGGTTT+TGG | 0.139058 | 3.4:-73370529 | MS.gene29798:intron |
| CGGTTTCAGGTTCGGGAGTT+TGG | 0.153915 | 3.4:+73373359 | None:intergenic |
| CTTCTGAATTCAGGTTCTTT+TGG | 0.158903 | 3.4:-73372206 | MS.gene29798:CDS |
| TGGAGTTCCGGTTCGGTTTC+AGG | 0.160693 | 3.4:+73373346 | None:intergenic |
| GACGATCCTCCTTTGGTATT+TGG | 0.178884 | 3.4:-73370474 | MS.gene29798:CDS |
| ACTTAGATTTGATGATCTTT+TGG | 0.228621 | 3.4:-73368314 | MS.gene29798:CDS |
| GCTTATGGTTGTTCCATTAC+TGG | 0.239378 | 3.4:+73373043 | None:intergenic |
| ATGATTGTACTTCTGAATTC+AGG | 0.254101 | 3.4:-73372215 | MS.gene29798:CDS |
| AACTTACTACGTTATTGATA+TGG | 0.264664 | 3.4:-73372262 | MS.gene29798:CDS |
| TCCGGTTCGGTTTCAGGTTC+GGG | 0.266835 | 3.4:+73373352 | None:intergenic |
| TCGGGTTGGGGTTGGAGTTC+CGG | 0.267657 | 3.4:+73373334 | None:intergenic |
| TTGCAAGACCTTCTGGAAAA+AGG | 0.304113 | 3.4:-73373079 | MS.gene29798:CDS |
| ATTCTGATGTGGTTCGGGTT+GGG | 0.310675 | 3.4:+73373321 | None:intergenic |
| TCCTTTGGTATTTGGCTGTT+TGG | 0.311832 | 3.4:-73370466 | MS.gene29798:CDS |
| TCCTTTGTTCTTGCTCCGTT+TGG | 0.321806 | 3.4:+73372975 | None:intergenic |
| TTCCGGTTCGGTTTCAGGTT+CGG | 0.329834 | 3.4:+73373351 | None:intergenic |
| ACCGTTTCTCAAACGGCTTA+TGG | 0.330570 | 3.4:+73373028 | None:intergenic |
| GCTCCGTTTGGCAATTTAGA+AGG | 0.332034 | 3.4:+73372987 | None:intergenic |
| TCGTCATTCTGATGTGGTTC+GGG | 0.352587 | 3.4:+73373316 | None:intergenic |
| TTCGTCATTCTGATGTGGTT+CGG | 0.356306 | 3.4:+73373315 | None:intergenic |
| TTCTGATGTGGTTCGGGTTG+GGG | 0.359746 | 3.4:+73373322 | None:intergenic |
| CTCCAATTGCAAACCGTAGA+AGG | 0.370502 | 3.4:+73369913 | None:intergenic |
| AAGGCGCTGAAGCTCGAAAA+TGG | 0.372980 | 3.4:-73373264 | MS.gene29798:CDS |
| TTCGGGATGCATGAGTTGTT+TGG | 0.375775 | 3.4:+73373237 | None:intergenic |
| TTACGCCGTTAGCATTAGTT+TGG | 0.386696 | 3.4:-73371731 | MS.gene29798:CDS |
| GGGAGTGTCGAACACTATAT+TGG | 0.391542 | 3.4:+73368338 | None:intergenic |
| TACCTTCTACGGTTTGCAAT+TGG | 0.391797 | 3.4:-73369915 | MS.gene29798:CDS |
| GGTTTCAGGTTCGGGAGTTT+GGG | 0.393642 | 3.4:+73373360 | None:intergenic |
| AGGAATATCGATCATCCATT+CGG | 0.395922 | 3.4:+73373219 | None:intergenic |
| CTCTGATCACAACCATAAAC+TGG | 0.400900 | 3.4:+73372108 | None:intergenic |
| AACTCTAAGCTTGCTGAAAC+CGG | 0.402317 | 3.4:-73372180 | MS.gene29798:CDS |
| CGCTGCTGATAGTTTCTCTA+AGG | 0.405302 | 3.4:-73369811 | MS.gene29798:intron |
| GGTCTACTTTCTTGATCTGC+TGG | 0.409750 | 3.4:+73368277 | None:intergenic |
| TGCACTCAGGGTACCTTCTA+CGG | 0.414316 | 3.4:-73369926 | MS.gene29798:CDS |
| CTGAAAATCTCACCAATGAT+TGG | 0.417671 | 3.4:-73373198 | MS.gene29798:intron |
| CATTCTGATGTGGTTCGGGT+TGG | 0.422805 | 3.4:+73373320 | None:intergenic |
| GAGACTAAAGGGCGCTTGAA+TGG | 0.424890 | 3.4:+73373496 | None:intergenic |
| GATGTGGTTCGGGTTGGGGT+TGG | 0.426758 | 3.4:+73373326 | None:intergenic |
| AAACTGCAGTCAATATGTTA+TGG | 0.427633 | 3.4:-73371700 | MS.gene29798:CDS |
| AGAGTAAGAATTTGAAGAAC+CGG | 0.432662 | 3.4:+73372944 | None:intergenic |
| CACCTGCGACGATCCTCCTT+TGG | 0.436144 | 3.4:-73370481 | MS.gene29798:CDS |
| GAAAACACCTGCTGTTGGTT+AGG | 0.438848 | 3.4:+73371654 | None:intergenic |
| AAAAGAAAATTACCAATCAT+TGG | 0.442547 | 3.4:+73373186 | None:intergenic |
| ACGTTATTGATATGGTTTGT+TGG | 0.445699 | 3.4:-73372254 | MS.gene29798:CDS |
| AAAGCTGATCTACAGTATCT+TGG | 0.453395 | 3.4:-73369855 | MS.gene29798:CDS |
| TGCAATTGGAGAGGGAGGAT+TGG | 0.456735 | 3.4:-73369901 | MS.gene29798:CDS |
| TTGTCTGCGTCGCTCTTGAT+CGG | 0.458152 | 3.4:+73373474 | None:intergenic |
| TTGGGGTTGGAGTTCCGGTT+CGG | 0.458396 | 3.4:+73373339 | None:intergenic |
| GAATTGAACCGTTTCTCAAA+CGG | 0.461223 | 3.4:+73373021 | None:intergenic |
| ACCATAAGCCGTTTGAGAAA+CGG | 0.462410 | 3.4:-73373029 | MS.gene29798:CDS |
| GGACGGAAGCTTCATGCAGC+AGG | 0.467201 | 3.4:-73370445 | MS.gene29798:intron |
| GGAATATCGATCATCCATTC+GGG | 0.471213 | 3.4:+73373220 | None:intergenic |
| AGCAGCGGCACGAGCTCGAT+TGG | 0.471276 | 3.4:+73369827 | None:intergenic |
| CGCTCTTGATCGGAGACTAA+AGG | 0.480262 | 3.4:+73373484 | None:intergenic |
| CCTTAGGCATGCACATTACC+AGG | 0.482412 | 3.4:-73371760 | MS.gene29798:intron |
| TCCCGAACCTGAAACCGAAC+CGG | 0.485257 | 3.4:-73373353 | MS.gene29798:CDS |
| CGGAGATCGTGCGGCGCCAT+GGG | 0.487792 | 3.4:+73373523 | None:intergenic |
| GCTCTTGATCGGAGACTAAA+GGG | 0.489934 | 3.4:+73373485 | None:intergenic |
| TTGGCAATTTAGAAGGAAAA+CGG | 0.498723 | 3.4:+73372994 | None:intergenic |
| CGAGGCGATTCTGTGCTTGA+CGG | 0.500346 | 3.4:+73373440 | None:intergenic |
| AGAAGACCGTCTTTGACATA+AGG | 0.503368 | 3.4:+73372054 | None:intergenic |
| GCCGTTAGCATTAGTTTGGA+AGG | 0.509100 | 3.4:-73371727 | MS.gene29798:CDS |
| GGCATGCACATTACCAGGCT+GGG | 0.511928 | 3.4:-73371755 | MS.gene29798:CDS |
| AGGCATGCACATTACCAGGC+TGG | 0.517727 | 3.4:-73371756 | MS.gene29798:CDS |
| AGGTTCGGGAGTTTGGGAAG+AGG | 0.518462 | 3.4:+73373366 | None:intergenic |
| TTGGTATTTGGCTGTTTGGA+CGG | 0.526548 | 3.4:-73370462 | MS.gene29798:CDS |
| TTCGGGAGTTTGGGAAGAGG+AGG | 0.527111 | 3.4:+73373369 | None:intergenic |
| CGAAGGAGGGTCAAAGGCAC+CGG | 0.531623 | 3.4:+73372161 | None:intergenic |
| AAAGATCATCAAATCTAAGT+GGG | 0.541300 | 3.4:+73368317 | None:intergenic |
| TGCAGTCAGATCTGCACTCA+GGG | 0.541927 | 3.4:-73369938 | MS.gene29798:intron |
| TTGCAGTCAGATCTGCACTC+AGG | 0.544181 | 3.4:-73369939 | MS.gene29798:intron |
| CTAAAGGGCGCTTGAATGGA+CGG | 0.548057 | 3.4:+73373500 | None:intergenic |
| CTACGGTTTGCAATTGGAGA+GGG | 0.548982 | 3.4:-73369909 | MS.gene29798:CDS |
| AGAGGAGGAGAGAGAGAATG+CGG | 0.550078 | 3.4:+73373384 | None:intergenic |
| CGGTTTGCAATTGGAGAGGG+AGG | 0.551117 | 3.4:-73369906 | MS.gene29798:CDS |
| TTTCCTTCTAAATTGCCAAA+CGG | 0.551675 | 3.4:-73372990 | MS.gene29798:CDS |
| GGAGGAGAGAGAGAATGCGG+TGG | 0.552403 | 3.4:+73373387 | None:intergenic |
| AAAAGATCATCAAATCTAAG+TGG | 0.556674 | 3.4:+73368316 | None:intergenic |
| CTAGAAGCTTCGAAGCTGAA+AGG | 0.568030 | 3.4:-73373283 | MS.gene29798:CDS |
| TACCAAAGGAGGATCGTCGC+AGG | 0.578997 | 3.4:+73370479 | None:intergenic |
| ATTCAGAAGTACAATCATAG+AGG | 0.580789 | 3.4:+73372220 | None:intergenic |
| ATAATACGAAGGAGGGTCAA+AGG | 0.582756 | 3.4:+73372155 | None:intergenic |
| AACAACTCATGCATCCCGAA+TGG | 0.584444 | 3.4:-73373234 | MS.gene29798:CDS |
| ATTGATATGGTTTGTTGGCG+TGG | 0.585196 | 3.4:-73372249 | MS.gene29798:CDS |
| TAGACCATGCGACATTGAGA+TGG | 0.588277 | 3.4:-73368260 | MS.gene29798:CDS |
| TCCTTCCAAACTAATGCTAA+CGG | 0.590429 | 3.4:+73371726 | None:intergenic |
| ACAAGTTCCTAACCAACAGC+AGG | 0.594991 | 3.4:-73371661 | MS.gene29798:intron |
| AATGGACGGCGGAGATCGTG+CGG | 0.599780 | 3.4:+73373514 | None:intergenic |
| TACTTATGATAATACGAAGG+AGG | 0.607857 | 3.4:+73372147 | None:intergenic |
| TTCAGAAGTACAATCATAGA+GGG | 0.608465 | 3.4:+73372221 | None:intergenic |
| ACTTATGATAATACGAAGGA+GGG | 0.609161 | 3.4:+73372148 | None:intergenic |
| TCGAGTTCGTCATTCTGATG+TGG | 0.609764 | 3.4:+73373310 | None:intergenic |
| TCTACGGTTTGCAATTGGAG+AGG | 0.611987 | 3.4:-73369910 | MS.gene29798:CDS |
| AATGAGAAAACACCTGCTGT+TGG | 0.612899 | 3.4:+73371649 | None:intergenic |
| AGAACAAAGGATGTTAACTC+CGG | 0.619861 | 3.4:-73372963 | MS.gene29798:CDS |
| CCATCCATCTCAATGTCGCA+TGG | 0.621943 | 3.4:+73368256 | None:intergenic |
| TGATCTACAGTATCTTGGCA+AGG | 0.626076 | 3.4:-73369850 | MS.gene29798:CDS |
| AAACAGCCAAATACCAAAGG+AGG | 0.633701 | 3.4:+73370468 | None:intergenic |
| TCCAAACAGCCAAATACCAA+AGG | 0.635259 | 3.4:+73370465 | None:intergenic |
| CCGTCTTTGACATAAGGCAC+AGG | 0.636086 | 3.4:+73372060 | None:intergenic |
| GCCAAACGGAGCAAGAACAA+AGG | 0.638380 | 3.4:-73372976 | MS.gene29798:CDS |
| GTTATGGACACAGACAGTAA+AGG | 0.638985 | 3.4:-73371684 | MS.gene29798:CDS |
| CTAACGGCGTAATCCCAGCC+TGG | 0.640007 | 3.4:+73371742 | None:intergenic |
| GAGCGTGGCGTTGAGCGTCG+AGG | 0.640208 | 3.4:+73373422 | None:intergenic |
| GTTTATGGTTGTGATCAGAG+TGG | 0.641110 | 3.4:-73372105 | MS.gene29798:CDS |
| CCATGCGACATTGAGATGGA+TGG | 0.649190 | 3.4:-73368256 | MS.gene29798:CDS |
| TGGAAGCTAAGAAGCGAGCG+TGG | 0.655970 | 3.4:+73373407 | None:intergenic |
| CCTGTGCCTTATGTCAAAGA+CGG | 0.659746 | 3.4:-73372060 | MS.gene29798:CDS |
| CAAAGGAGGATCGTCGCAGG+TGG | 0.668481 | 3.4:+73370482 | None:intergenic |
| AAGATCATCAAATCTAAGTG+GGG | 0.672476 | 3.4:+73368318 | None:intergenic |
| CTTAGAGAAACTATCAGCAG+CGG | 0.691380 | 3.4:+73369812 | None:intergenic |
| TTTGACATAAGGCACAGGTG+CGG | 0.707161 | 3.4:+73372065 | None:intergenic |
| CTATACTTATGATAATACGA+AGG | 0.719944 | 3.4:+73372144 | None:intergenic |
| AAGGGCGCTTGAATGGACGG+CGG | 0.768147 | 3.4:+73373503 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTAAAAACTATTTG+TGG | - | chr3.4:73370734-73370753 | MS.gene29798:intron | 10.0% |
| !! | AATGGAAATAATCATAATAA+TGG | + | chr3.4:73370334-73370353 | None:intergenic | 15.0% |
| !! | AGATTAAAAACAAAACAAAT+AGG | + | chr3.4:73372273-73372292 | None:intergenic | 15.0% |
| !! | ATGGAAATAATCATAATAAT+GGG | + | chr3.4:73370333-73370352 | None:intergenic | 15.0% |
| !! | ATGTAAGATTATATAAAATG+TGG | + | chr3.4:73371440-73371459 | None:intergenic | 15.0% |
| !! | ATTAAAATTTGTGTTATGTT+TGG | - | chr3.4:73368917-73368936 | MS.gene29798:intron | 15.0% |
| !! | TATGAATTAAGTTATTTGTT+TGG | - | chr3.4:73369449-73369468 | MS.gene29798:intron | 15.0% |
| !! | TTAATAATGAAAATGAAAAC+AGG | + | chr3.4:73370860-73370879 | None:intergenic | 15.0% |
| !! | TTGTAATTAAAAGTGAAAAT+AGG | - | chr3.4:73370956-73370975 | MS.gene29798:intron | 15.0% |
| !!! | AAATATCATTTCAAACATTT+TGG | + | chr3.4:73369804-73369823 | None:intergenic | 15.0% |
| !!! | TGGTTTTTAAAAAAAAACAA+GGG | + | chr3.4:73373061-73373080 | None:intergenic | 15.0% |
| !!! | TTGGTTTTTAAAAAAAAACA+AGG | + | chr3.4:73373062-73373081 | None:intergenic | 15.0% |
| !!! | TTGTTTTTTTTTAAAAACCA+AGG | - | chr3.4:73373061-73373080 | MS.gene29798:CDS | 15.0% |
| !!! | TTTTTGCAAAATTATTATAG+TGG | - | chr3.4:73368991-73369010 | MS.gene29798:intron | 15.0% |
| !! | AAAACAAAATAAAAACGATG+TGG | - | chr3.4:73370928-73370947 | MS.gene29798:intron | 20.0% |
| !! | AAAAGAAAATTACCAATCAT+TGG | + | chr3.4:73368589-73368608 | None:intergenic | 20.0% |
| !! | AATAAGATTAAAACAGCTTA+TGG | - | chr3.4:73369194-73369213 | MS.gene29798:intron | 20.0% |
| !! | ATCAGAAAAAAAATTCAGAA+CGG | + | chr3.4:73371376-73371395 | None:intergenic | 20.0% |
| !! | TAATCATTTGAAAAACTGTT+TGG | + | chr3.4:73369249-73369268 | None:intergenic | 20.0% |
| !! | TCTGAAAGATTAAGAATATT+GGG | + | chr3.4:73369888-73369907 | None:intergenic | 20.0% |
| !! | TTAAAAGTGAAAATAGGAAA+TGG | - | chr3.4:73370962-73370981 | MS.gene29798:intron | 20.0% |
| !! | TTATATGAAATGCATTACAT+TGG | - | chr3.4:73372234-73372253 | MS.gene29798:CDS | 20.0% |
| !! | TTTCATGAATAATCATTGTT+TGG | - | chr3.4:73372343-73372362 | MS.gene29798:intron | 20.0% |
| !!! | ATAATCTTACATGTTTTTCT+AGG | - | chr3.4:73371448-73371467 | MS.gene29798:intron | 20.0% |
| !!! | TAATCCAAACATACATTTTT+AGG | - | chr3.4:73369032-73369051 | MS.gene29798:intron | 20.0% |
| !!! | TATTTTCACGTAAAATGAAA+TGG | - | chr3.4:73373093-73373112 | MS.gene29798:intron | 20.0% |
| !!! | TGTTTTATTAATCAGTTTTC+TGG | - | chr3.4:73371220-73371239 | MS.gene29798:intron | 20.0% |
| !!! | TTCTGAAAGATTAAGAATAT+TGG | + | chr3.4:73369889-73369908 | None:intergenic | 20.0% |
| !!! | TTTTAAAAACTATTTGTGGA+GGG | - | chr3.4:73370738-73370757 | MS.gene29798:intron | 20.0% |
| !!! | TTTTGAATTTCTGAATTTTC+AGG | - | chr3.4:73368663-73368682 | MS.gene29798:intron | 20.0% |
| !!! | TTTTTAAAAACTATTTGTGG+AGG | - | chr3.4:73370737-73370756 | MS.gene29798:intron | 20.0% |
| ! | AAAAGATCATCAAATCTAAG+TGG | + | chr3.4:73373341-73373360 | None:intergenic | 25.0% |
| ! | AAAATTATTCATGAACAGAC+TGG | + | chr3.4:73369836-73369855 | None:intergenic | 25.0% |
| ! | AAAGATCATCAAATCTAAGT+GGG | + | chr3.4:73373340-73373359 | None:intergenic | 25.0% |
| ! | AAAGCCTAAAAATGTATGTT+TGG | + | chr3.4:73369039-73369058 | None:intergenic | 25.0% |
| ! | AAATTATGATGGTCAGAATT+CGG | - | chr3.4:73370686-73370705 | MS.gene29798:intron | 25.0% |
| ! | AACTTACTACGTTATTGATA+TGG | - | chr3.4:73369510-73369529 | MS.gene29798:intron | 25.0% |
| ! | ATATACACACAGTGATAAAA+TGG | + | chr3.4:73370164-73370183 | None:intergenic | 25.0% |
| ! | ATGAATAATCATTGTTTGGT+TGG | - | chr3.4:73372347-73372366 | MS.gene29798:intron | 25.0% |
| ! | ATGTTAGATCTAACTTCTAA+GGG | + | chr3.4:73371018-73371037 | None:intergenic | 25.0% |
| ! | CCACAAAAACAACAAAAATA+AGG | - | chr3.4:73372724-73372743 | MS.gene29798:intron | 25.0% |
| ! | CTATACTTATGATAATACGA+AGG | + | chr3.4:73369631-73369650 | None:intergenic | 25.0% |
| ! | GAAAGTTAGATTAGATTTCT+TGG | + | chr3.4:73371808-73371827 | None:intergenic | 25.0% |
| ! | GAACTTTAATTATCATTCTC+AGG | + | chr3.4:73372138-73372157 | None:intergenic | 25.0% |
| ! | GCATAATCTTGAAATTATGA+TGG | - | chr3.4:73370675-73370694 | MS.gene29798:intron | 25.0% |
| ! | GGTTAAATATTAGATGACAA+CGG | - | chr3.4:73370438-73370457 | MS.gene29798:intron | 25.0% |
| ! | TCGTAAAAGTTATGAAATAG+CGG | + | chr3.4:73372461-73372480 | None:intergenic | 25.0% |
| ! | TTACAACAGTAACAATGTAA+AGG | - | chr3.4:73370802-73370821 | MS.gene29798:intron | 25.0% |
| ! | TTGATCATAGTAGTTAATAG+CGG | - | chr3.4:73372374-73372393 | MS.gene29798:intron | 25.0% |
| ! | TTTAGTAGATTTCTATACCT+TGG | - | chr3.4:73370204-73370223 | MS.gene29798:intron | 25.0% |
| !!! | ACTTAGATTTGATGATCTTT+TGG | - | chr3.4:73373340-73373359 | MS.gene29798:CDS | 25.0% |
| !!! | CCTTATTTTTGTTGTTTTTG+TGG | + | chr3.4:73372727-73372746 | None:intergenic | 25.0% |
| !!! | CTTAGATTTGATGATCTTTT+GGG | - | chr3.4:73373341-73373360 | MS.gene29798:CDS | 25.0% |
| !!! | TCATTTCAAACATTTTGGAA+TGG | + | chr3.4:73369799-73369818 | None:intergenic | 25.0% |
| AAAACCAGAGTAGTTAATAG+CGG | + | chr3.4:73373255-73373274 | None:intergenic | 30.0% | |
| AAACTGCAGTCAATATGTTA+TGG | - | chr3.4:73370072-73370091 | MS.gene29798:intron | 30.0% | |
| AAATGATCAAAGAAGCAACA+AGG | + | chr3.4:73372166-73372185 | None:intergenic | 30.0% | |
| AACGCATTTCTCTCAAAAAA+CGG | + | chr3.4:73372948-73372967 | None:intergenic | 30.0% | |
| AACTTATGGTTTAAGGGATT+AGG | - | chr3.4:73368942-73368961 | MS.gene29798:intron | 30.0% | |
| AAGAGCCTAACAAGTTAAAA+AGG | + | chr3.4:73369956-73369975 | None:intergenic | 30.0% | |
| AAGATCATCAAATCTAAGTG+GGG | + | chr3.4:73373339-73373358 | None:intergenic | 30.0% | |
| ACTTAATTCATATACACCGT+CGG | + | chr3.4:73369441-73369460 | None:intergenic | 30.0% | |
| ACTTATGATAATACGAAGGA+GGG | + | chr3.4:73369627-73369646 | None:intergenic | 30.0% | |
| ACTTATGGTTTAAGGGATTA+GGG | - | chr3.4:73368943-73368962 | MS.gene29798:intron | 30.0% | |
| ACTTGATAGAACATGTCAAA+TGG | + | chr3.4:73370352-73370371 | None:intergenic | 30.0% | |
| AGAGAGAAACTGAAGTTATT+AGG | - | chr3.4:73373012-73373031 | MS.gene29798:CDS | 30.0% | |
| AGAGCCTAACAAGTTAAAAA+GGG | + | chr3.4:73369955-73369974 | None:intergenic | 30.0% | |
| AGAGTAAGAATTTGAAGAAC+CGG | + | chr3.4:73368831-73368850 | None:intergenic | 30.0% | |
| ATGAAAATAGTGTGACTGAT+GGG | + | chr3.4:73372329-73372348 | None:intergenic | 30.0% | |
| ATGATTGTACTTCTGAATTC+AGG | - | chr3.4:73369557-73369576 | MS.gene29798:intron | 30.0% | |
| ATGTATAAATGTCTGACAAG+GGG | + | chr3.4:73370271-73370290 | None:intergenic | 30.0% | |
| CATGTTAGATCTAACTTCTA+AGG | + | chr3.4:73371019-73371038 | None:intergenic | 30.0% | |
| CTTCCTTCTTTCATTCTTTA+CGG | + | chr3.4:73372994-73373013 | None:intergenic | 30.0% | |
| GAGAAGTAAGATTTCTTACT+GGG | - | chr3.4:73371489-73371508 | MS.gene29798:intron | 30.0% | |
| GAGAGAAACTGAAGTTATTA+GGG | - | chr3.4:73373013-73373032 | MS.gene29798:CDS | 30.0% | |
| GATGTATAAATGTCTGACAA+GGG | + | chr3.4:73370272-73370291 | None:intergenic | 30.0% | |
| GCTTGGCAATTTAATATCAT+TGG | + | chr3.4:73372600-73372619 | None:intergenic | 30.0% | |
| GGCAATTTAATATCATTGGA+AGG | + | chr3.4:73372596-73372615 | None:intergenic | 30.0% | |
| GGCGAAAATTAAATGAATCA+TGG | + | chr3.4:73372044-73372063 | None:intergenic | 30.0% | |
| TAACTAATAATGCCAAGTCT+TGG | - | chr3.4:73369920-73369939 | MS.gene29798:CDS | 30.0% | |
| TACTTATGATAATACGAAGG+AGG | + | chr3.4:73369628-73369647 | None:intergenic | 30.0% | |
| TGAAAATACAAGATTCTCCT+TGG | + | chr3.4:73373081-73373100 | None:intergenic | 30.0% | |
| TGAGAAGTAAGATTTCTTAC+TGG | - | chr3.4:73371488-73371507 | MS.gene29798:intron | 30.0% | |
| TGATGCTTAATCTAGTTATG+AGG | - | chr3.4:73371392-73371411 | MS.gene29798:intron | 30.0% | |
| TGATGTATAAATGTCTGACA+AGG | + | chr3.4:73370273-73370292 | None:intergenic | 30.0% | |
| TGTTTATGAACAAAACAGAG+AGG | - | chr3.4:73372796-73372815 | MS.gene29798:intron | 30.0% | |
| TTCATAGCACTTCAGTATAT+TGG | + | chr3.4:73371581-73371600 | None:intergenic | 30.0% | |
| TTCTTAGTAAGAGAAATGCT+AGG | + | chr3.4:73371746-73371765 | None:intergenic | 30.0% | |
| TTGACACATGAATGAATTTG+TGG | + | chr3.4:73371149-73371168 | None:intergenic | 30.0% | |
| TTGGCAATTTAGAAGGAAAA+CGG | + | chr3.4:73368781-73368800 | None:intergenic | 30.0% | |
| TTGGTGAACTTATGGTTTAA+GGG | - | chr3.4:73368936-73368955 | MS.gene29798:intron | 30.0% | |
| TTTCACGTAAAATGAAATGG+CGG | - | chr3.4:73373096-73373115 | MS.gene29798:intron | 30.0% | |
| TTTCCTTCTAAATTGCCAAA+CGG | - | chr3.4:73368782-73368801 | MS.gene29798:intron | 30.0% | |
| TTTGGTGAACTTATGGTTTA+AGG | - | chr3.4:73368935-73368954 | MS.gene29798:intron | 30.0% | |
| ! | ACGTTATTGATATGGTTTGT+TGG | - | chr3.4:73369518-73369537 | MS.gene29798:intron | 30.0% |
| ! | AGAAGTTTTCTTCAGACAAA+CGG | + | chr3.4:73372302-73372321 | None:intergenic | 30.0% |
| ! | ATTCAGAAGTACAATCATAG+AGG | + | chr3.4:73369555-73369574 | None:intergenic | 30.0% |
| ! | GACTCAATACAACTTTAAAG+AGG | - | chr3.4:73371115-73371134 | MS.gene29798:intron | 30.0% |
| ! | TGTTATGTTTGGTGAACTTA+TGG | - | chr3.4:73368928-73368947 | MS.gene29798:intron | 30.0% |
| ! | TTCAGAAGTACAATCATAGA+GGG | + | chr3.4:73369554-73369573 | None:intergenic | 30.0% |
| ! | TTCAGTTTAGTTCCAGTTTA+TGG | - | chr3.4:73369652-73369671 | MS.gene29798:intron | 30.0% |
| !! | GTTAGATTTTTGGATACAGT+AGG | - | chr3.4:73372209-73372228 | MS.gene29798:CDS | 30.0% |
| !! | TGATAGTTTCTCTAAGGTAA+GGG | - | chr3.4:73371967-73371986 | MS.gene29798:intron | 30.0% |
| !! | TTCTGAATTCAGGTTCTTTT+GGG | - | chr3.4:73369567-73369586 | MS.gene29798:intron | 30.0% |
| !! | TTTTGAGAGAAATGCGTTTT+GGG | - | chr3.4:73372950-73372969 | MS.gene29798:CDS | 30.0% |
| !! | TTTTTGAGAGAAATGCGTTT+TGG | - | chr3.4:73372949-73372968 | MS.gene29798:CDS | 30.0% |
| !!! | AACTTGTTAGGCTCTTATTT+TGG | - | chr3.4:73369960-73369979 | MS.gene29798:intron | 30.0% |
| !!! | ACTTGTTAGGCTCTTATTTT+GGG | - | chr3.4:73369961-73369980 | MS.gene29798:intron | 30.0% |
| !!! | CTTTTTTTTGCAAGAAGCTT+CGG | + | chr3.4:73370588-73370607 | None:intergenic | 30.0% |
| !!! | TGTTTTTTTGCAATAACAGC+AGG | - | chr3.4:73369483-73369502 | MS.gene29798:intron | 30.0% |
| !!! | TTTCCCCTTTTTAACTTGTT+AGG | - | chr3.4:73369948-73369967 | MS.gene29798:intron | 30.0% |
| AAAGCTGATCTACAGTATCT+TGG | - | chr3.4:73371917-73371936 | MS.gene29798:intron | 35.0% | |
| AAATCTAACCAATCTCGTGA+CGG | + | chr3.4:73372198-73372217 | None:intergenic | 35.0% | |
| AAGACACCAATTGGGAATTA+CGG | + | chr3.4:73372500-73372519 | None:intergenic | 35.0% | |
| ACTCTAATACTCACTCTCAT+TGG | - | chr3.4:73371616-73371635 | MS.gene29798:intron | 35.0% | |
| AGAAAATAGTAGTCACCTCA+TGG | + | chr3.4:73368871-73368890 | None:intergenic | 35.0% | |
| AGAACAAAGGATGTTAACTC+CGG | - | chr3.4:73368809-73368828 | MS.gene29798:intron | 35.0% | |
| AGAGCAATAAGACACCAATT+GGG | + | chr3.4:73372508-73372527 | None:intergenic | 35.0% | |
| AGGAATATCGATCATCCATT+CGG | + | chr3.4:73368556-73368575 | None:intergenic | 35.0% | |
| AGTGAAATATGCAGTGTGTT+TGG | - | chr3.4:73370509-73370528 | MS.gene29798:CDS | 35.0% | |
| ATAGAGGATGAACAAAACAG+AGG | - | chr3.4:73372761-73372780 | MS.gene29798:intron | 35.0% | |
| ATGTTCTATCAAGTTTCCAG+AGG | - | chr3.4:73370358-73370377 | MS.gene29798:intron | 35.0% | |
| CACTATATTGGAACATAACC+TGG | + | chr3.4:73373307-73373326 | None:intergenic | 35.0% | |
| CATCTCTAGTGATTCTATGA+AGG | - | chr3.4:73370653-73370672 | MS.gene29798:intron | 35.0% | |
| CATGAAAATAGTGTGACTGA+TGG | + | chr3.4:73372330-73372349 | None:intergenic | 35.0% | |
| CTAACACTCACTCTTCTATT+GGG | + | chr3.4:73371713-73371732 | None:intergenic | 35.0% | |
| CTATTGGGTTAAACACATGT+GGG | + | chr3.4:73371698-73371717 | None:intergenic | 35.0% | |
| CTCTAATACTCACTCTCATT+GGG | - | chr3.4:73371617-73371636 | MS.gene29798:intron | 35.0% | |
| CTGAAAATCTCACCAATGAT+TGG | - | chr3.4:73368574-73368593 | MS.gene29798:intron | 35.0% | |
| GAATTGAACCGTTTCTCAAA+CGG | + | chr3.4:73368754-73368773 | None:intergenic | 35.0% | |
| GAGCCTAACAAGTTAAAAAG+GGG | + | chr3.4:73369954-73369973 | None:intergenic | 35.0% | |
| TAAGACGAGATGCAGATAAA+GGG | + | chr3.4:73369310-73369329 | None:intergenic | 35.0% | |
| TACAAGCAAGCAATGTTTCA+TGG | - | chr3.4:73370417-73370436 | MS.gene29798:intron | 35.0% | |
| TAGAGCAATAAGACACCAAT+TGG | + | chr3.4:73372509-73372528 | None:intergenic | 35.0% | |
| TCATTGGGTGAAATTCATGT+GGG | - | chr3.4:73371632-73371651 | MS.gene29798:intron | 35.0% | |
| TCCTTCCAAACTAATGCTAA+CGG | + | chr3.4:73370049-73370068 | None:intergenic | 35.0% | |
| TCTATTGGGTTAAACACATG+TGG | + | chr3.4:73371699-73371718 | None:intergenic | 35.0% | |
| TTGAAACTGTGTACAACTTG+AGG | - | chr3.4:73370769-73370788 | MS.gene29798:intron | 35.0% | |
| TTGGAATGGCATTCACATAT+TGG | + | chr3.4:73369785-73369804 | None:intergenic | 35.0% | |
| ! | AACAGGATGCAGATACTTTT+AGG | + | chr3.4:73372009-73372028 | None:intergenic | 35.0% |
| ! | ACAAAACACCTTTTTCCAGA+AGG | + | chr3.4:73368704-73368723 | None:intergenic | 35.0% |
| ! | ACAGGATGCAGATACTTTTA+GGG | + | chr3.4:73372008-73372027 | None:intergenic | 35.0% |
| ! | CAATCATTGGTGAGATTTTC+AGG | + | chr3.4:73368576-73368595 | None:intergenic | 35.0% |
| ! | TATCCCGCTATAGCATTTTT+GGG | + | chr3.4:73372422-73372441 | None:intergenic | 35.0% |
| ! | TGTTTTGTGGTTTCCAGTAA+TGG | - | chr3.4:73368716-73368735 | MS.gene29798:intron | 35.0% |
| ! | TTTGAGAGAAATGCGTTTTG+GGG | - | chr3.4:73372951-73372970 | MS.gene29798:CDS | 35.0% |
| !! | CACGAGATTGGTTAGATTTT+TGG | - | chr3.4:73372199-73372218 | MS.gene29798:CDS | 35.0% |
| !! | CTGATAGTTTCTCTAAGGTA+AGG | - | chr3.4:73371966-73371985 | MS.gene29798:intron | 35.0% |
| !! | CTTCTGAATTCAGGTTCTTT+TGG | - | chr3.4:73369566-73369585 | MS.gene29798:intron | 35.0% |
| !! | TAGTAGTTAATAGCGGATAG+CGG | - | chr3.4:73372381-73372400 | MS.gene29798:intron | 35.0% |
| !!! | TTCTGGAAAAAGGTGTTTTG+TGG | - | chr3.4:73368703-73368722 | MS.gene29798:intron | 35.0% |
| !!! | TTTGTTTTTGCAAGACCTTC+TGG | - | chr3.4:73368686-73368705 | MS.gene29798:intron | 35.0% |
| AAACAGCCAAATACCAAAGG+AGG | + | chr3.4:73371307-73371326 | None:intergenic | 40.0% | |
| AATGAGAAAACACCTGCTGT+TGG | + | chr3.4:73370126-73370145 | None:intergenic | 40.0% | |
| ACCATAAGCCGTTTGAGAAA+CGG | - | chr3.4:73368743-73368762 | MS.gene29798:intron | 40.0% | |
| AGAAGACCGTCTTTGACATA+AGG | + | chr3.4:73369721-73369740 | None:intergenic | 40.0% | |
| AGACACCAATTGGGAATTAC+GGG | + | chr3.4:73372499-73372518 | None:intergenic | 40.0% | |
| AGCAATGTCGAGATTATCAC+CGG | - | chr3.4:73372617-73372636 | MS.gene29798:intron | 40.0% | |
| AGCCAAATCTTAGCATGCAA+TGG | + | chr3.4:73372065-73372084 | None:intergenic | 40.0% | |
| ATAATACGAAGGAGGGTCAA+AGG | + | chr3.4:73369620-73369639 | None:intergenic | 40.0% | |
| CAAGAAGTCGAGCAAAAACA+AGG | + | chr3.4:73370897-73370916 | None:intergenic | 40.0% | |
| CATGAATGAATTTGTGGACC+TGG | + | chr3.4:73371143-73371162 | None:intergenic | 40.0% | |
| CATTGCTTGCTTGTACACTA+CGG | + | chr3.4:73370412-73370431 | None:intergenic | 40.0% | |
| CATTTCTCCATCTATACCTC+TGG | + | chr3.4:73370377-73370396 | None:intergenic | 40.0% | |
| CTAAGACGAGATGCAGATAA+AGG | + | chr3.4:73369311-73369330 | None:intergenic | 40.0% | |
| CTCATTGGGTGAAATTCATG+TGG | - | chr3.4:73371631-73371650 | MS.gene29798:intron | 40.0% | |
| CTCTGATCACAACCATAAAC+TGG | + | chr3.4:73369667-73369686 | None:intergenic | 40.0% | |
| CTTAGAGAAACTATCAGCAG+CGG | + | chr3.4:73371963-73371982 | None:intergenic | 40.0% | |
| CTTTATCTGCATCTCGTCTT+AGG | - | chr3.4:73369309-73369328 | MS.gene29798:intron | 40.0% | |
| GAAATGGATCCCACATAAAG+TGG | - | chr3.4:73371667-73371686 | MS.gene29798:CDS | 40.0% | |
| GAAGTTACAAACCTGAGGAA+CGG | - | chr3.4:73372852-73372871 | MS.gene29798:intron | 40.0% | |
| GCTAACACTCACTCTTCTAT+TGG | + | chr3.4:73371714-73371733 | None:intergenic | 40.0% | |
| GCTCAAAGACATAAACAGAC+CGG | + | chr3.4:73372639-73372658 | None:intergenic | 40.0% | |
| GCTTATGGTTGTTCCATTAC+TGG | + | chr3.4:73368732-73368751 | None:intergenic | 40.0% | |
| GCTTATTTGAGCTTATCTGC+TGG | + | chr3.4:73369274-73369293 | None:intergenic | 40.0% | |
| GGAATATCGATCATCCATTC+GGG | + | chr3.4:73368555-73368574 | None:intergenic | 40.0% | |
| GTCAAGAAGTTACAAACCTG+AGG | - | chr3.4:73372847-73372866 | MS.gene29798:intron | 40.0% | |
| GTGATAATCTCGACATTGCT+TGG | + | chr3.4:73372617-73372636 | None:intergenic | 40.0% | |
| GTTATGGACACAGACAGTAA+AGG | - | chr3.4:73370088-73370107 | MS.gene29798:intron | 40.0% | |
| GTTTATGGTTGTGATCAGAG+TGG | - | chr3.4:73369667-73369686 | MS.gene29798:intron | 40.0% | |
| TACCTTCTACGGTTTGCAAT+TGG | - | chr3.4:73371857-73371876 | MS.gene29798:intron | 40.0% | |
| TCCAAACAGCCAAATACCAA+AGG | + | chr3.4:73371310-73371329 | None:intergenic | 40.0% | |
| TCCTTTGGTATTTGGCTGTT+TGG | - | chr3.4:73371306-73371325 | MS.gene29798:intron | 40.0% | |
| TGATCTACAGTATCTTGGCA+AGG | - | chr3.4:73371922-73371941 | MS.gene29798:intron | 40.0% | |
| TTACGCCGTTAGCATTAGTT+TGG | - | chr3.4:73370041-73370060 | MS.gene29798:intron | 40.0% | |
| TTCGTCATTCTGATGTGGTT+CGG | + | chr3.4:73368460-73368479 | None:intergenic | 40.0% | |
| TTGGTATTTGGCTGTTTGGA+CGG | - | chr3.4:73371310-73371329 | MS.gene29798:intron | 40.0% | |
| TTTAGAAGAGAGCAAACACG+AGG | - | chr3.4:73372825-73372844 | MS.gene29798:intron | 40.0% | |
| ! | ACTTGACTGCATTTTCCATG+AGG | - | chr3.4:73368853-73368872 | MS.gene29798:intron | 40.0% |
| ! | ATCCCGCTATAGCATTTTTG+GGG | + | chr3.4:73372421-73372440 | None:intergenic | 40.0% |
| ! | CAAGTTTCCAGAGGTATAGA+TGG | - | chr3.4:73370367-73370386 | MS.gene29798:intron | 40.0% |
| ! | CTATCCCGCTATAGCATTTT+TGG | + | chr3.4:73372423-73372442 | None:intergenic | 40.0% |
| ! | GCAGCAGGTTTGTTTGAAAT+AGG | - | chr3.4:73371342-73371361 | MS.gene29798:intron | 40.0% |
| ! | TACAACTTTAAAGAGGCTCC+AGG | - | chr3.4:73371122-73371141 | MS.gene29798:intron | 40.0% |
| ! | TTGCAAGACCTTCTGGAAAA+AGG | - | chr3.4:73368693-73368712 | MS.gene29798:intron | 40.0% |
| ! | TTTTGTGGACAACACAGTCA+TGG | + | chr3.4:73372712-73372731 | None:intergenic | 40.0% |
| !! | AACTCTAAGCTTGCTGAAAC+CGG | - | chr3.4:73369592-73369611 | MS.gene29798:intron | 40.0% |
| !! | ACTTGGCTTTGTCCATTGAA+GGG | + | chr3.4:73371064-73371083 | None:intergenic | 40.0% |
| !! | ATTGATATGGTTTGTTGGCG+TGG | - | chr3.4:73369523-73369542 | MS.gene29798:intron | 40.0% |
| !! | ATTTGTTATTTCCCCCCCTT+AGG | - | chr3.4:73369996-73370015 | MS.gene29798:intron | 40.0% |
| !!! | GTTTTGGAGCTTCAAGAAGA+TGG | - | chr3.4:73371259-73371278 | MS.gene29798:intron | 40.0% |
| !!! | TTTTGGGGTGAGAAGATGAA+AGG | - | chr3.4:73372966-73372985 | MS.gene29798:CDS | 40.0% |
| AAAACCGCTATGCAGTGTTG+CGG | - | chr3.4:73373130-73373149 | MS.gene29798:intron | 45.0% | |
| AACAACTCATGCATCCCGAA+TGG | - | chr3.4:73368538-73368557 | MS.gene29798:intron | 45.0% | |
| ACAAGTTCCTAACCAACAGC+AGG | - | chr3.4:73370111-73370130 | MS.gene29798:intron | 45.0% | |
| ACCGTTTCTCAAACGGCTTA+TGG | + | chr3.4:73368747-73368766 | None:intergenic | 45.0% | |
| ACGAGATGCAGATAAAGGGT+CGG | + | chr3.4:73369306-73369325 | None:intergenic | 45.0% | |
| AGTTAATAGCGGCGCTATAG+CGG | + | chr3.4:73373244-73373263 | None:intergenic | 45.0% | |
| ATCTGTCAGCTCACTTTGGT+TGG | - | chr3.4:73373364-73373383 | MS.gene29798:CDS | 45.0% | |
| CATCACCCGTAATTCCCAAT+TGG | - | chr3.4:73372491-73372510 | MS.gene29798:intron | 45.0% | |
| CCTGTGCCTTATGTCAAAGA+CGG | - | chr3.4:73369712-73369731 | MS.gene29798:intron | 45.0% | |
| CGACCCCAAAAATGCTATAG+CGG | - | chr3.4:73372415-73372434 | MS.gene29798:intron | 45.0% | |
| CGCCATTGCATGCTAAGATT+TGG | - | chr3.4:73372060-73372079 | MS.gene29798:CDS | 45.0% | |
| CGCTGCTGATAGTTTCTCTA+AGG | - | chr3.4:73371961-73371980 | MS.gene29798:intron | 45.0% | |
| CTACGGTTTGCAATTGGAGA+GGG | - | chr3.4:73371863-73371882 | MS.gene29798:intron | 45.0% | |
| CTAGAAGCTTCGAAGCTGAA+AGG | - | chr3.4:73368489-73368508 | MS.gene29798:intron | 45.0% | |
| CTCCAATTGCAAACCGTAGA+AGG | + | chr3.4:73371862-73371881 | None:intergenic | 45.0% | |
| CTTCAATGGACAAAGCCAAG+TGG | - | chr3.4:73371063-73371082 | MS.gene29798:intron | 45.0% | |
| GACCCCAAAAATGCTATAGC+GGG | - | chr3.4:73372416-73372435 | MS.gene29798:intron | 45.0% | |
| GACGATCCTCCTTTGGTATT+TGG | - | chr3.4:73371298-73371317 | MS.gene29798:intron | 45.0% | |
| GATGCAGTGTTCAATCACCA+AGG | + | chr3.4:73370224-73370243 | None:intergenic | 45.0% | |
| GCGCCGTAAAGAATGAAAGA+AGG | - | chr3.4:73372988-73373007 | MS.gene29798:CDS | 45.0% | |
| GCTCCGTTTGGCAATTTAGA+AGG | + | chr3.4:73368788-73368807 | None:intergenic | 45.0% | |
| GCTCTTGATCGGAGACTAAA+GGG | + | chr3.4:73368290-73368309 | None:intergenic | 45.0% | |
| GGAAACAGAGAGCAGAATAG+AGG | - | chr3.4:73372745-73372764 | MS.gene29798:intron | 45.0% | |
| GGGGAAAATTGACCAAGACT+TGG | + | chr3.4:73369935-73369954 | None:intergenic | 45.0% | |
| GGTCTACTTTCTTGATCTGC+TGG | + | chr3.4:73373498-73373517 | None:intergenic | 45.0% | |
| GTGAAAGCTCTTTACACCGA+CGG | - | chr3.4:73369422-73369441 | MS.gene29798:intron | 45.0% | |
| TAGACCATGCGACATTGAGA+TGG | - | chr3.4:73373512-73373531 | MS.gene29798:CDS | 45.0% | |
| TATCTCATAACGCTACGCCA+TGG | - | chr3.4:73373168-73373187 | MS.gene29798:intron | 45.0% | |
| TCCTTTGTTCTTGCTCCGTT+TGG | + | chr3.4:73368800-73368819 | None:intergenic | 45.0% | |
| TCGAGTTCGTCATTCTGATG+TGG | + | chr3.4:73368465-73368484 | None:intergenic | 45.0% | |
| TCGTCATTCTGATGTGGTTC+GGG | + | chr3.4:73368459-73368478 | None:intergenic | 45.0% | |
| TCTACGGTTTGCAATTGGAG+AGG | - | chr3.4:73371862-73371881 | MS.gene29798:intron | 45.0% | |
| TGCATCGTGTACGAATCGTT+GGG | - | chr3.4:73370238-73370257 | MS.gene29798:intron | 45.0% | |
| TGGGATCCATTTCCAAAGTG+TGG | + | chr3.4:73371660-73371679 | None:intergenic | 45.0% | |
| TTCATGTGGGTACCACACTT+TGG | - | chr3.4:73371645-73371664 | MS.gene29798:intron | 45.0% | |
| TTCGGGATGCATGAGTTGTT+TGG | + | chr3.4:73368538-73368557 | None:intergenic | 45.0% | |
| TTTGACATAAGGCACAGGTG+CGG | + | chr3.4:73369710-73369729 | None:intergenic | 45.0% | |
| ! | ATTCTGATGTGGTTCGGGTT+GGG | + | chr3.4:73368454-73368473 | None:intergenic | 45.0% |
| ! | CTGGTAATGTGCATGCCTAA+GGG | + | chr3.4:73370014-73370033 | None:intergenic | 45.0% |
| ! | CTTTCCAAACCAGGTGGTTT+TGG | - | chr3.4:73371243-73371262 | MS.gene29798:intron | 45.0% |
| ! | GAAAACACCTGCTGTTGGTT+AGG | + | chr3.4:73370121-73370140 | None:intergenic | 45.0% |
| ! | GCCGTTAGCATTAGTTTGGA+AGG | - | chr3.4:73370045-73370064 | MS.gene29798:intron | 45.0% |
| ! | TGGGTACCACACTTTGGAAA+TGG | - | chr3.4:73371651-73371670 | MS.gene29798:intron | 45.0% |
| ! | TGGTAATGTGCATGCCTAAG+GGG | + | chr3.4:73370013-73370032 | None:intergenic | 45.0% |
| ! | TGTTGCGATTTTGCACTTCC+AGG | - | chr3.4:73373286-73373305 | MS.gene29798:CDS | 45.0% |
| !! | ACCAATCTCGTGACGGATAT+TGG | + | chr3.4:73372191-73372210 | None:intergenic | 45.0% |
| !! | CACTTGGCTTTGTCCATTGA+AGG | + | chr3.4:73371065-73371084 | None:intergenic | 45.0% |
| !! | GGGAGTGTCGAACACTATAT+TGG | + | chr3.4:73373319-73373338 | None:intergenic | 45.0% |
| !!! | AGAGGGAGGATTGGTTTTGT+TGG | - | chr3.4:73371880-73371899 | MS.gene29798:intron | 45.0% |
| !!! | CGCTATAGCATTTTTGGGGT+CGG | + | chr3.4:73372417-73372436 | None:intergenic | 45.0% |
| !!! | GGAGGATTGGTTTTGTTGGA+TGG | - | chr3.4:73371884-73371903 | MS.gene29798:intron | 45.0% |
| !!! | GTTTTCTGGCTTTCCAAACC+AGG | - | chr3.4:73371234-73371253 | MS.gene29798:intron | 45.0% |
| !! | TTTCTTTAATAAATTTATAA+TGG | - | chr3.4:73370300-73370319 | MS.gene29798:intron | 5.0% |
| AGAGGAGGAGAGAGAGAATG+CGG | + | chr3.4:73368391-73368410 | None:intergenic | 50.0% | |
| AGAGGGTAGACAAGTCCACT+TGG | + | chr3.4:73371081-73371100 | None:intergenic | 50.0% | |
| AGCGCCGCTATTAACTACTC+TGG | - | chr3.4:73373248-73373267 | MS.gene29798:CDS | 50.0% | |
| AGCTCCAAAACCACCTGGTT+TGG | + | chr3.4:73371250-73371269 | None:intergenic | 50.0% | |
| ATGCAGATAAAGGGTCGGTC+TGG | + | chr3.4:73369301-73369320 | None:intergenic | 50.0% | |
| CCATCCATCTCAATGTCGCA+TGG | + | chr3.4:73373519-73373538 | None:intergenic | 50.0% | |
| CCATGCGACATTGAGATGGA+TGG | - | chr3.4:73373516-73373535 | MS.gene29798:CDS | 50.0% | |
| CCGTCTTTGACATAAGGCAC+AGG | + | chr3.4:73369715-73369734 | None:intergenic | 50.0% | |
| CCTTAGGCATGCACATTACC+AGG | - | chr3.4:73370012-73370031 | MS.gene29798:intron | 50.0% | |
| CGCCATGGCTTATTGCATAG+CGG | - | chr3.4:73373183-73373202 | MS.gene29798:intron | 50.0% | |
| CGCTCTTGATCGGAGACTAA+AGG | + | chr3.4:73368291-73368310 | None:intergenic | 50.0% | |
| CTGCATCGTGTACGAATCGT+TGG | - | chr3.4:73370237-73370256 | MS.gene29798:intron | 50.0% | |
| CTTGAAGCTCCAAAACCACC+TGG | + | chr3.4:73371255-73371274 | None:intergenic | 50.0% | |
| GACCGCTATGCAATAAGCCA+TGG | + | chr3.4:73373188-73373207 | None:intergenic | 50.0% | |
| GATAAAGGGTCGGTCTGGAT+TGG | + | chr3.4:73369296-73369315 | None:intergenic | 50.0% | |
| GCCAAACGGAGCAAGAACAA+AGG | - | chr3.4:73368796-73368815 | MS.gene29798:intron | 50.0% | |
| GCCAATATCCGTCACGAGAT+TGG | - | chr3.4:73372187-73372206 | MS.gene29798:CDS | 50.0% | |
| GGATCCCACATAAAGTGGTG+AGG | - | chr3.4:73371672-73371691 | MS.gene29798:CDS | 50.0% | |
| GGCGTAGCGTTATGAGATAG+CGG | + | chr3.4:73373167-73373186 | None:intergenic | 50.0% | |
| GGTAATGTGCATGCCTAAGG+GGG | + | chr3.4:73370012-73370031 | None:intergenic | 50.0% | |
| GTAATGTGCATGCCTAAGGG+GGG | + | chr3.4:73370011-73370030 | None:intergenic | 50.0% | |
| GTTACAAACCTGAGGAACGG+CGG | - | chr3.4:73372855-73372874 | MS.gene29798:intron | 50.0% | |
| TAATGTGCATGCCTAAGGGG+GGG | + | chr3.4:73370010-73370029 | None:intergenic | 50.0% | |
| TCTCCAAACCCACCCTTCAA+TGG | - | chr3.4:73371049-73371068 | MS.gene29798:intron | 50.0% | |
| TGCAATTGGAGAGGGAGGAT+TGG | - | chr3.4:73371871-73371890 | MS.gene29798:intron | 50.0% | |
| TGCAGTCAGATCTGCACTCA+GGG | - | chr3.4:73371834-73371853 | MS.gene29798:intron | 50.0% | |
| TGGCTTATTGCATAGCGGTC+CGG | - | chr3.4:73373188-73373207 | MS.gene29798:intron | 50.0% | |
| TGGGATCTGTCAGCTCACTT+TGG | - | chr3.4:73373360-73373379 | MS.gene29798:CDS | 50.0% | |
| TGGGCCTCACCACTTTATGT+GGG | + | chr3.4:73371679-73371698 | None:intergenic | 50.0% | |
| TTGCAGTCAGATCTGCACTC+AGG | - | chr3.4:73371833-73371852 | MS.gene29798:intron | 50.0% | |
| TTGTCTGCGTCGCTCTTGAT+CGG | + | chr3.4:73368301-73368320 | None:intergenic | 50.0% | |
| ! | AGTGGACTTGTCTACCCTCT+CGG | - | chr3.4:73371081-73371100 | MS.gene29798:intron | 50.0% |
| ! | ATGAGATAGCGGCGCAATAG+CGG | + | chr3.4:73373156-73373175 | None:intergenic | 50.0% |
| ! | CATTCTGATGTGGTTCGGGT+TGG | + | chr3.4:73368455-73368474 | None:intergenic | 50.0% |
| ! | CCTGGTAATGTGCATGCCTA+AGG | + | chr3.4:73370015-73370034 | None:intergenic | 50.0% |
| ! | GGCTTTGTCCATTGAAGGGT+GGG | + | chr3.4:73371060-73371079 | None:intergenic | 50.0% |
| ! | TGCACTCAGGGTACCTTCTA+CGG | - | chr3.4:73371846-73371865 | MS.gene29798:intron | 50.0% |
| ! | TGTCCATTGAAGGGTGGGTT+TGG | + | chr3.4:73371055-73371074 | None:intergenic | 50.0% |
| ! | TTGAAGGGTGGGTTTGGAGA+AGG | + | chr3.4:73371049-73371068 | None:intergenic | 50.0% |
| !! | AAGGCGCTGAAGCTCGAAAA+TGG | - | chr3.4:73368508-73368527 | MS.gene29798:intron | 50.0% |
| !! | CTAAAGGGCGCTTGAATGGA+CGG | + | chr3.4:73368275-73368294 | None:intergenic | 50.0% |
| !! | GAGACTAAAGGGCGCTTGAA+TGG | + | chr3.4:73368279-73368298 | None:intergenic | 50.0% |
| !! | GGTTTCAGGTTCGGGAGTTT+GGG | + | chr3.4:73368415-73368434 | None:intergenic | 50.0% |
| !! | TGGCTTTGTCCATTGAAGGG+TGG | + | chr3.4:73371061-73371080 | None:intergenic | 50.0% |
| !! | TTCCGGTTCGGTTTCAGGTT+CGG | + | chr3.4:73368424-73368443 | None:intergenic | 50.0% |
| !! | TTCTGATGTGGTTCGGGTTG+GGG | + | chr3.4:73368453-73368472 | None:intergenic | 50.0% |
| !! | TTCTGGCTTTCCAAACCAGG+TGG | - | chr3.4:73371237-73371256 | MS.gene29798:intron | 50.0% |
| AGGCATGCACATTACCAGGC+TGG | - | chr3.4:73370016-73370035 | MS.gene29798:intron | 55.0% | |
| AGGTTCGGGAGTTTGGGAAG+AGG | + | chr3.4:73368409-73368428 | None:intergenic | 55.0% | |
| AGTCACACACCAACACCGAG+AGG | + | chr3.4:73371099-73371118 | None:intergenic | 55.0% | |
| CATGGCAGAGTCGTGTCAAC+AGG | + | chr3.4:73372026-73372045 | None:intergenic | 55.0% | |
| CGAGGCGATTCTGTGCTTGA+CGG | + | chr3.4:73368335-73368354 | None:intergenic | 55.0% | |
| CGGTTTGCAATTGGAGAGGG+AGG | - | chr3.4:73371866-73371885 | MS.gene29798:intron | 55.0% | |
| GAAATAGCGGCCATAGCGCT+AGG | + | chr3.4:73372448-73372467 | None:intergenic | 55.0% | |
| GGCATGCACATTACCAGGCT+GGG | - | chr3.4:73370017-73370036 | MS.gene29798:intron | 55.0% | |
| GTCACACACCAACACCGAGA+GGG | + | chr3.4:73371098-73371117 | None:intergenic | 55.0% | |
| GTCATGGCAGCATCAGCTTC+TGG | + | chr3.4:73372696-73372715 | None:intergenic | 55.0% | |
| GTGGGCCTCACCACTTTATG+TGG | + | chr3.4:73371680-73371699 | None:intergenic | 55.0% | |
| TAAGGAACGACGGCGGATGA+CGG | - | chr3.4:73372881-73372900 | MS.gene29798:intron | 55.0% | |
| TACCAAAGGAGGATCGTCGC+AGG | + | chr3.4:73371296-73371315 | None:intergenic | 55.0% | |
| TCCCGAACCTGAAACCGAAC+CGG | - | chr3.4:73368419-73368438 | MS.gene29798:intron | 55.0% | |
| TGGAAGCTAAGAAGCGAGCG+TGG | + | chr3.4:73368368-73368387 | None:intergenic | 55.0% | |
| TTCGGGAGTTTGGGAAGAGG+AGG | + | chr3.4:73368406-73368425 | None:intergenic | 55.0% | |
| TTGGGGTTGGAGTTCCGGTT+CGG | + | chr3.4:73368436-73368455 | None:intergenic | 55.0% | |
| ! | CTTGTCTACCCTCTCGGTGT+TGG | - | chr3.4:73371087-73371106 | MS.gene29798:intron | 55.0% |
| ! | GGTGCGACTGTGGCGTTTTA+CGG | - | chr3.4:73372902-73372921 | MS.gene29798:intron | 55.0% |
| !! | CGGTTTCAGGTTCGGGAGTT+TGG | + | chr3.4:73368416-73368435 | None:intergenic | 55.0% |
| !! | TCCGGTTCGGTTTCAGGTTC+GGG | + | chr3.4:73368423-73368442 | None:intergenic | 55.0% |
| !! | TGGAGTTCCGGTTCGGTTTC+AGG | + | chr3.4:73368429-73368448 | None:intergenic | 55.0% |
| AATGGACGGCGGAGATCGTG+CGG | + | chr3.4:73368261-73368280 | None:intergenic | 60.0% | |
| ACAAACCTGAGGAACGGCGG+CGG | - | chr3.4:73372858-73372877 | MS.gene29798:intron | 60.0% | |
| CAAAGGAGGATCGTCGCAGG+TGG | + | chr3.4:73371293-73371312 | None:intergenic | 60.0% | |
| CACCTGCGACGATCCTCCTT+TGG | - | chr3.4:73371291-73371310 | MS.gene29798:intron | 60.0% | |
| CTAACGGCGTAATCCCAGCC+TGG | + | chr3.4:73370033-73370052 | None:intergenic | 60.0% | |
| GGACGGAAGCTTCATGCAGC+AGG | - | chr3.4:73371327-73371346 | MS.gene29798:intron | 60.0% | |
| GGAGGAGAGAGAGAATGCGG+TGG | + | chr3.4:73368388-73368407 | None:intergenic | 60.0% | |
| GGCGCTATAGCGGCCAATAG+CGG | + | chr3.4:73373234-73373253 | None:intergenic | 60.0% | |
| ! | CGAAGGAGGGTCAAAGGCAC+CGG | + | chr3.4:73369614-73369633 | None:intergenic | 60.0% |
| !! | AAGGGCGCTTGAATGGACGG+CGG | + | chr3.4:73368272-73368291 | None:intergenic | 60.0% |
| !! | GATGTGGTTCGGGTTGGGGT+TGG | + | chr3.4:73368449-73368468 | None:intergenic | 60.0% |
| !! | TCGGGTTGGGGTTGGAGTTC+CGG | + | chr3.4:73368441-73368460 | None:intergenic | 60.0% |
| ACGGCGGCGGTAAGGAACGA+CGG | - | chr3.4:73372871-73372890 | MS.gene29798:intron | 65.0% | |
| AGCAGCGGCACGAGCTCGAT+TGG | + | chr3.4:73371948-73371967 | None:intergenic | 65.0% | |
| CGGGATAGCGCCTAGCGCTA+TGG | - | chr3.4:73372435-73372454 | MS.gene29798:intron | 65.0% | |
| GCGGCCGCAACACTGCATAG+CGG | + | chr3.4:73373137-73373156 | None:intergenic | 65.0% | |
| ! | TAGCGGATAGCGGCGCGTAG+CGG | - | chr3.4:73372391-73372410 | MS.gene29798:intron | 65.0% |
| CCTGAGGAACGGCGGCGGTA+AGG | - | chr3.4:73372863-73372882 | MS.gene29798:intron | 70.0% | |
| CCTTACCGCCGCCGTTCCTC+AGG | + | chr3.4:73372866-73372885 | None:intergenic | 70.0% | |
| GCGGCGGTAAGGAACGACGG+CGG | - | chr3.4:73372874-73372893 | MS.gene29798:intron | 70.0% | |
| ! | GAGCGTGGCGTTGAGCGTCG+AGG | + | chr3.4:73368353-73368372 | None:intergenic | 70.0% |
| ! | GGCGGATGACGGTGCGACTG+TGG | - | chr3.4:73372892-73372911 | MS.gene29798:intron | 70.0% |
| AGCGGCCAATAGCGGCCGCG+CGG | + | chr3.4:73373226-73373245 | None:intergenic | 75.0% | |
| CCAATAGCGGCCGCGCGGTG+CGG | + | chr3.4:73373221-73373240 | None:intergenic | 75.0% | |
| ! | CCGCACCGCGCGGCCGCTAT+TGG | - | chr3.4:73373218-73373237 | MS.gene29798:CDS | 80.0% |
| ! | CGCGCGGTGCGGTGCGGTAC+CGG | + | chr3.4:73373210-73373229 | None:intergenic | 80.0% |
| ! | CGGTACCGCACCGCACCGCG+CGG | - | chr3.4:73373208-73373227 | MS.gene29798:CDS | 80.0% |
| ! | AGCGGCCGCGCGGTGCGGTG+CGG | + | chr3.4:73373216-73373235 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 73368252 | 73373542 | 73368252 | ID=MS.gene29798 |
| chr3.4 | mRNA | 73368252 | 73373542 | 73368252 | ID=MS.gene29798.t1;Parent=MS.gene29798 |
| chr3.4 | exon | 73373199 | 73373542 | 73373199 | ID=MS.gene29798.t1.exon1;Parent=MS.gene29798.t1 |
| chr3.4 | CDS | 73373199 | 73373542 | 73373199 | ID=cds.MS.gene29798.t1;Parent=MS.gene29798.t1 |
| chr3.4 | exon | 73372920 | 73373109 | 73372920 | ID=MS.gene29798.t1.exon2;Parent=MS.gene29798.t1 |
| chr3.4 | CDS | 73372920 | 73373109 | 73372920 | ID=cds.MS.gene29798.t1;Parent=MS.gene29798.t1 |
| chr3.4 | exon | 73372042 | 73372292 | 73372042 | ID=MS.gene29798.t1.exon3;Parent=MS.gene29798.t1 |
| chr3.4 | CDS | 73372042 | 73372292 | 73372042 | ID=cds.MS.gene29798.t1;Parent=MS.gene29798.t1 |
| chr3.4 | exon | 73371662 | 73371776 | 73371662 | ID=MS.gene29798.t1.exon4;Parent=MS.gene29798.t1 |
| chr3.4 | CDS | 73371662 | 73371776 | 73371662 | ID=cds.MS.gene29798.t1;Parent=MS.gene29798.t1 |
| chr3.4 | exon | 73370446 | 73370538 | 73370446 | ID=MS.gene29798.t1.exon5;Parent=MS.gene29798.t1 |
| chr3.4 | CDS | 73370446 | 73370538 | 73370446 | ID=cds.MS.gene29798.t1;Parent=MS.gene29798.t1 |
| chr3.4 | exon | 73369812 | 73369955 | 73369812 | ID=MS.gene29798.t1.exon6;Parent=MS.gene29798.t1 |
| chr3.4 | CDS | 73369812 | 73369955 | 73369812 | ID=cds.MS.gene29798.t1;Parent=MS.gene29798.t1 |
| chr3.4 | exon | 73368252 | 73368368 | 73368252 | ID=MS.gene29798.t1.exon7;Parent=MS.gene29798.t1 |
| chr3.4 | CDS | 73368252 | 73368368 | 73368252 | ID=cds.MS.gene29798.t1;Parent=MS.gene29798.t1 |
| Gene Sequence |
| Protein sequence |
