Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024701.t1 | XP_003610966.1 | 97.4 | 379 | 9 | 1 | 1 | 379 | 1 | 378 | 6.30E-185 | 656.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024701.t1 | Q99J36 | 32.5 | 197 | 123 | 4 | 184 | 377 | 81 | 270 | 6.5e-21 | 103.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024701.t1 | G7K999 | 97.4 | 379 | 9 | 1 | 1 | 379 | 1 | 378 | 4.5e-185 | 656.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024701.t1 | MTR_5g009010 | 96.834 | 379 | 11 | 1 | 1 | 379 | 1 | 378 | 0.0 | 745 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024701.t1 | AT5G12410 | 55.291 | 378 | 146 | 6 | 12 | 377 | 9 | 375 | 5.12e-134 | 388 |
Find 82 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGGCAATTTCAACTATTA+TGG | 0.192469 | 5.4:-3765236 | None:intergenic |
| TTTGCAGAAACCAGTGAAAA+AGG | 0.213652 | 5.4:+3761686 | MS.gene024701:intron |
| GGCAGACTGTTTGCTTGATC+GGG | 0.303852 | 5.4:+3765841 | MS.gene024701:intron |
| AAATGCGCCAACAAGTGATT+TGG | 0.316855 | 5.4:+3763500 | MS.gene024701:CDS |
| TCAGATCCTCCTAAAATTGA+TGG | 0.322675 | 5.4:+3763360 | MS.gene024701:CDS |
| CCCGATACTGCTGCCGCCGC+CGG | 0.331092 | 5.4:+3761542 | MS.gene024701:CDS |
| CGCTTTGCCAAGCTTGAATC+GGG | 0.363345 | 5.4:+3764457 | MS.gene024701:CDS |
| ACCGGCGGCGGCAGCAGTAT+CGG | 0.364568 | 5.4:-3761543 | None:intergenic |
| ATCCGGTTAACGATCTCGTT+GGG | 0.365210 | 5.4:-3764532 | None:intergenic |
| CCATTACACCCTGGTGTTCA+AGG | 0.375474 | 5.4:+3761717 | MS.gene024701:CDS |
| CCGGCGGCGGCAGCAGTATC+GGG | 0.387466 | 5.4:-3761542 | None:intergenic |
| GCATGCTCAGGCTGGGGATA+AGG | 0.395820 | 5.4:+3763386 | MS.gene024701:CDS |
| ATCTTCAATTAACTTATCAA+TGG | 0.396744 | 5.4:-3763547 | None:intergenic |
| CTCCTCATCATCGTCACTAC+TGG | 0.397151 | 5.4:-3763223 | None:intergenic |
| ATGGCTAGTATTGTCGCTAT+TGG | 0.397862 | 5.4:-3763316 | None:intergenic |
| CTATTGGAAACATCCAGTTT+AGG | 0.400292 | 5.4:-3763300 | None:intergenic |
| TATGAAGCCCGGGCAAATAC+TGG | 0.408924 | 5.4:+3765130 | MS.gene024701:CDS |
| TGGCAGACTGTTTGCTTGAT+CGG | 0.410558 | 5.4:+3765840 | MS.gene024701:intron |
| TGACGATGATGAGGAGGAAG+AGG | 0.418381 | 5.4:+3763230 | MS.gene024701:CDS |
| ACGCTTTGCCAAGCTTGAAT+CGG | 0.426317 | 5.4:+3764456 | MS.gene024701:CDS |
| TTTCACCTGTTTCATTGTCA+TGG | 0.428481 | 5.4:-3763335 | None:intergenic |
| AGTTGTCCAAGTACAATATT+AGG | 0.433079 | 5.4:+3765883 | MS.gene024701:CDS |
| CCTTGAACACCAGGGTGTAA+TGG | 0.434065 | 5.4:-3761717 | None:intergenic |
| AATGCGCCAACAAGTGATTT+GGG | 0.444791 | 5.4:+3763501 | MS.gene024701:CDS |
| CCATAATAGTTGAAATTGCC+AGG | 0.445233 | 5.4:+3765236 | MS.gene024701:CDS |
| ATGGTTTGCATGCTCAGGCT+GGG | 0.458167 | 5.4:+3763379 | MS.gene024701:CDS |
| GATGGTTTGCATGCTCAGGC+TGG | 0.459066 | 5.4:+3763378 | MS.gene024701:CDS |
| ACTAGCCATGACAATGAAAC+AGG | 0.461113 | 5.4:+3763330 | MS.gene024701:CDS |
| TCGGACAACTTTGTCACACT+TGG | 0.474464 | 5.4:-3763156 | None:intergenic |
| GCCAGAAGGAAGTGAGGAAA+AGG | 0.476120 | 5.4:+3763266 | MS.gene024701:CDS |
| ATTCAAATGCGGAAGAAAGA+TGG | 0.476734 | 5.4:+3764499 | MS.gene024701:CDS |
| TTACTGAGGTCAACTTTATG+AGG | 0.482532 | 5.4:-3765202 | None:intergenic |
| AAGGCTACTAGTGATGATAA+AGG | 0.486381 | 5.4:+3763405 | MS.gene024701:CDS |
| AATTGATGGTTTGCATGCTC+AGG | 0.494441 | 5.4:+3763374 | MS.gene024701:CDS |
| TAACTGCCTAATATTGTACT+TGG | 0.498069 | 5.4:-3765889 | None:intergenic |
| GCCCCAACGAGATCGTTAAC+CGG | 0.500331 | 5.4:+3764530 | MS.gene024701:CDS |
| AAAAGCAATCCAGCCTCTTG+TGG | 0.500551 | 5.4:+3764730 | MS.gene024701:CDS |
| AGTACTGCTCCACAAGAGGC+TGG | 0.501229 | 5.4:-3764739 | None:intergenic |
| AGGTCAACTTTATGAGGTGC+AGG | 0.509742 | 5.4:-3765196 | None:intergenic |
| TGTCAACACCAGTATTTGCC+CGG | 0.510087 | 5.4:-3765138 | None:intergenic |
| GATACTGCTGCCGCCGCCGG+TGG | 0.511273 | 5.4:+3761545 | MS.gene024701:CDS |
| TTGCAGCACTCTTTCACAGC+CGG | 0.524969 | 5.4:-3763474 | None:intergenic |
| ATTACAACCCGATTCAAGCT+TGG | 0.528495 | 5.4:-3764464 | None:intergenic |
| ATGCTGCTGATGTCACTATC+CGG | 0.531589 | 5.4:-3764549 | None:intergenic |
| AGAACTGAGAGACAAGAGTA+AGG | 0.536916 | 5.4:+3763578 | MS.gene024701:CDS |
| GGGCAAATACTGGTGTTGAC+AGG | 0.537044 | 5.4:+3765140 | MS.gene024701:CDS |
| TATCCGGTTAACGATCTCGT+TGG | 0.539404 | 5.4:-3764533 | None:intergenic |
| TGGTTTGCATGCTCAGGCTG+GGG | 0.542396 | 5.4:+3763380 | MS.gene024701:CDS |
| AAAGGCTCATGCTTTACTTG+AGG | 0.548357 | 5.4:-3765913 | None:intergenic |
| TGCTGTGATGTATGAAGCCC+GGG | 0.549023 | 5.4:+3765120 | MS.gene024701:CDS |
| AAGCTTGAATCGGGTTGTAA+TGG | 0.554079 | 5.4:+3764466 | MS.gene024701:CDS |
| TGATGAGGAGGAAGAGGAGA+AGG | 0.556136 | 5.4:+3763236 | MS.gene024701:CDS |
| TTGCTGTGATGTATGAAGCC+CGG | 0.561353 | 5.4:+3765119 | MS.gene024701:CDS |
| CAGCACTCTTTCACAGCCGG+TGG | 0.561979 | 5.4:-3763471 | None:intergenic |
| CGGGGTCATTGAGAAGTACA+AGG | 0.563046 | 5.4:+3765860 | MS.gene024701:CDS |
| AGTCTCATGTTATGCTTCAA+AGG | 0.565719 | 5.4:+3764697 | MS.gene024701:CDS |
| ATGCACAGTATTACCTTCTG+TGG | 0.570175 | 5.4:-3764782 | None:intergenic |
| GTCAACACCAGTATTTGCCC+GGG | 0.570407 | 5.4:-3765137 | None:intergenic |
| TGACATCAGCAGCATCGACT+AGG | 0.577556 | 5.4:+3764557 | MS.gene024701:CDS |
| TCCGGTTAACGATCTCGTTG+GGG | 0.579623 | 5.4:-3764531 | None:intergenic |
| GAGAAGGCGCAAGTGCCAGA+AGG | 0.586468 | 5.4:+3763252 | MS.gene024701:CDS |
| GCAGACTGTTTGCTTGATCG+GGG | 0.589916 | 5.4:+3765842 | MS.gene024701:intron |
| AAAGATAGCTGATGAGCCAC+CGG | 0.594350 | 5.4:+3763455 | MS.gene024701:CDS |
| TCTCTTCTTTCCACCGGCGG+CGG | 0.600339 | 5.4:-3761555 | None:intergenic |
| GTGTGGTATTTATTCAAATG+CGG | 0.602556 | 5.4:+3764488 | MS.gene024701:CDS |
| AAATACTGGTGTTGACAGGA+TGG | 0.603355 | 5.4:+3765144 | MS.gene024701:CDS |
| TTCCAGTAGTGACGATGATG+AGG | 0.604964 | 5.4:+3763221 | MS.gene024701:CDS |
| AGAAGGAAGTGAGGAAAAGG+AGG | 0.606127 | 5.4:+3763269 | MS.gene024701:CDS |
| CATAATAGTTGAAATTGCCA+GGG | 0.614211 | 5.4:+3765237 | MS.gene024701:CDS |
| TGTGGAGCAGTACTTTCCCG+TGG | 0.617448 | 5.4:+3764748 | MS.gene024701:CDS |
| GCATAACATGAGACTTCGAT+AGG | 0.618502 | 5.4:-3764689 | None:intergenic |
| GGAAAGTACTGCTCCACAAG+AGG | 0.628857 | 5.4:-3764743 | None:intergenic |
| AATATTGAGAGCTTCGCGAG+TGG | 0.632829 | 5.4:-3761778 | None:intergenic |
| CAGTAGTGACGATGATGAGG+AGG | 0.634098 | 5.4:+3763224 | MS.gene024701:CDS |
| GGAAACTCAAAATCCACAGA+AGG | 0.636552 | 5.4:+3764769 | MS.gene024701:CDS |
| GATGGAAATAATTGATGCTG+TGG | 0.636669 | 5.4:+3765162 | MS.gene024701:CDS |
| CTCATGTTATGCTTCAAAGG+AGG | 0.639066 | 5.4:+3764700 | MS.gene024701:CDS |
| AATAGAGAAGATACGTTGTG+AGG | 0.642594 | 5.4:-3761590 | None:intergenic |
| GCAAGTGCCAGAAGGAAGTG+AGG | 0.646484 | 5.4:+3763260 | MS.gene024701:CDS |
| CGACTAGGAAACATATGTCG+AGG | 0.650767 | 5.4:+3764572 | MS.gene024701:CDS |
| GGTTCGTATCCATTACACCC+TGG | 0.700142 | 5.4:+3761708 | MS.gene024701:CDS |
| TGAATCGGGTTGTAATGGTG+TGG | 0.717428 | 5.4:+3764471 | MS.gene024701:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATTTTTTTTTAATAATTTC+TGG | + | chr5.4:3763678-3763697 | MS.gene024701:intron | 10.0% |
| !!! | TATATTTATCATTTTTTTCT+CGG | + | chr5.4:3764226-3764245 | MS.gene024701:intron | 10.0% |
| !!! | TTTTTTATTTAAAGGTTTAT+CGG | - | chr5.4:3763178-3763197 | None:intergenic | 10.0% |
| !! | AAAAAAATCATATGATATGT+TGG | - | chr5.4:3763667-3763686 | None:intergenic | 15.0% |
| !! | AAAAAATAATCTAATACATG+CGG | - | chr5.4:3764818-3764837 | None:intergenic | 15.0% |
| !! | AATTGATTATGGTTAAAATT+GGG | + | chr5.4:3761970-3761989 | MS.gene024701:intron | 15.0% |
| !! | AATTTATATGTTTATTGAGA+AGG | + | chr5.4:3762288-3762307 | MS.gene024701:intron | 15.0% |
| !! | ATATAATCTTGAATATGATA+TGG | - | chr5.4:3763838-3763857 | None:intergenic | 15.0% |
| !! | CAATAAACATATAAATTATG+AGG | - | chr5.4:3762285-3762304 | None:intergenic | 15.0% |
| !! | TCTAACTTTAAACTATAAAT+TGG | - | chr5.4:3762090-3762109 | None:intergenic | 15.0% |
| !!! | AACGTGATTTTTTTATTTAA+AGG | - | chr5.4:3763186-3763205 | None:intergenic | 15.0% |
| !!! | AATTAAAAGAGATTCTTTTA+GGG | + | chr5.4:3762405-3762424 | MS.gene024701:intron | 15.0% |
| !!! | CACTTTTCATTTTTAAATTA+CGG | - | chr5.4:3762601-3762620 | None:intergenic | 15.0% |
| !!! | TAAATTTGATTTAACATGTT+TGG | - | chr5.4:3762152-3762171 | None:intergenic | 15.0% |
| !!! | TAATTAAAAGAGATTCTTTT+AGG | + | chr5.4:3762404-3762423 | MS.gene024701:intron | 15.0% |
| !!! | TACTTTTCTTTTTTGAATTA+CGG | + | chr5.4:3762472-3762491 | MS.gene024701:intron | 15.0% |
| !!! | TATATCTCTATAATCAATTT+TGG | + | chr5.4:3762170-3762189 | MS.gene024701:intron | 15.0% |
| !!! | TGTATAATTTTTTATCAGTT+TGG | + | chr5.4:3765791-3765810 | MS.gene024701:intron | 15.0% |
| !!! | TTTAAAGTTAGAATCAATTA+CGG | + | chr5.4:3762098-3762117 | MS.gene024701:intron | 15.0% |
| !! | AAGGAATAAAGAGATATATA+CGG | - | chr5.4:3763950-3763969 | None:intergenic | 20.0% |
| !! | AATAAAAAATTCATGGAAAG+CGG | - | chr5.4:3761844-3761863 | None:intergenic | 20.0% |
| !! | ACTAACAATAGAAACAATAA+AGG | - | chr5.4:3763049-3763068 | None:intergenic | 20.0% |
| !! | ATAATTTCACACAAAACATT+GGG | - | chr5.4:3765449-3765468 | None:intergenic | 20.0% |
| !! | ATCTTCAATTAACTTATCAA+TGG | - | chr5.4:3763550-3763569 | None:intergenic | 20.0% |
| !! | CAAGAAAAAACTTCAAAAAA+TGG | - | chr5.4:3765344-3765363 | None:intergenic | 20.0% |
| !! | CAATACAGTATATTCAATAT+AGG | + | chr5.4:3763759-3763778 | MS.gene024701:intron | 20.0% |
| !! | CACTTGTATAAATTGATAAA+TGG | - | chr5.4:3762994-3763013 | None:intergenic | 20.0% |
| !! | GAATAGAATAATATACAGAA+TGG | - | chr5.4:3763620-3763639 | None:intergenic | 20.0% |
| !! | GAATTGATTATGGTTAAAAT+TGG | + | chr5.4:3761969-3761988 | MS.gene024701:intron | 20.0% |
| !! | TTTAATTATGAAATCCCTAT+TGG | + | chr5.4:3765493-3765512 | MS.gene024701:intron | 20.0% |
| !! | TTTATCAATTTATACAAGTG+AGG | + | chr5.4:3762994-3763013 | MS.gene024701:intron | 20.0% |
| !! | TTTGAATCTTATTAAAGTCA+AGG | - | chr5.4:3762954-3762973 | None:intergenic | 20.0% |
| !!! | GATTTTGAATGAATTGATTA+TGG | + | chr5.4:3761959-3761978 | MS.gene024701:intron | 20.0% |
| ! | AAAAAAGCGATACACATTAA+TGG | - | chr5.4:3763023-3763042 | None:intergenic | 25.0% |
| ! | AAAAAGCGATACACATTAAT+GGG | - | chr5.4:3763022-3763041 | None:intergenic | 25.0% |
| ! | AAACTACACATACAAAATAC+TGG | - | chr5.4:3765101-3765120 | None:intergenic | 25.0% |
| ! | AAAGGATACTTATACTTCAA+GGG | + | chr5.4:3764122-3764141 | MS.gene024701:intron | 25.0% |
| ! | AAAGTAAACTGAGTTATGTT+TGG | + | chr5.4:3761996-3762015 | MS.gene024701:intron | 25.0% |
| ! | AAATAGGTTTCTTTCCAATA+GGG | - | chr5.4:3765510-3765529 | None:intergenic | 25.0% |
| ! | AAGATTGAAATTGAAAGAAG+AGG | - | chr5.4:3761624-3761643 | None:intergenic | 25.0% |
| ! | ACTGTGTTAACAATTTAAGT+TGG | - | chr5.4:3765634-3765653 | None:intergenic | 25.0% |
| ! | AGTGACAACAAATTATCTAA+TGG | - | chr5.4:3764971-3764990 | None:intergenic | 25.0% |
| ! | ATAATCTAGCATAGAAAACA+AGG | - | chr5.4:3763969-3763988 | None:intergenic | 25.0% |
| ! | ATCCTTTATGCATACTTTAT+GGG | - | chr5.4:3762746-3762765 | None:intergenic | 25.0% |
| ! | CATAATTTCACACAAAACAT+TGG | - | chr5.4:3765450-3765469 | None:intergenic | 25.0% |
| ! | CATTGAAACATAAGAAAACA+AGG | - | chr5.4:3763921-3763940 | None:intergenic | 25.0% |
| ! | CTTAAATTGTTAACACAGTT+AGG | + | chr5.4:3765635-3765654 | MS.gene024701:intron | 25.0% |
| ! | GTTTATCATATTCTCTTTGA+TGG | + | chr5.4:3762686-3762705 | MS.gene024701:intron | 25.0% |
| ! | TAAAGGATACTTATACTTCA+AGG | + | chr5.4:3764121-3764140 | MS.gene024701:intron | 25.0% |
| ! | TAGTTCAATAAGTGTATGTT+TGG | - | chr5.4:3762213-3762232 | None:intergenic | 25.0% |
| !! | TGTGAAATTATGCATTTTCA+TGG | + | chr5.4:3765458-3765477 | MS.gene024701:intron | 25.0% |
| !! | TTGAAATTTTGAATACACTG+TGG | + | chr5.4:3762783-3762802 | MS.gene024701:intron | 25.0% |
| !! | TTTCCTTTTCATTTGTGAAT+AGG | + | chr5.4:3764382-3764401 | MS.gene024701:intron | 25.0% |
| !!! | CTTTGTTGATTTCTTAGTAA+AGG | + | chr5.4:3764104-3764123 | MS.gene024701:intron | 25.0% |
| !!! | GTTCATGATGCTTTATTTAT+AGG | + | chr5.4:3762248-3762267 | MS.gene024701:intron | 25.0% |
| !!! | TCAACTATTATGGTTTTATC+AGG | - | chr5.4:3765229-3765248 | None:intergenic | 25.0% |
| !!! | TCTCAAATATTTGCTTTTGA+TGG | + | chr5.4:3764169-3764188 | MS.gene024701:intron | 25.0% |
| !!! | TGTTTTGTTATACCATCTTT+CGG | + | chr5.4:3765714-3765733 | MS.gene024701:intron | 25.0% |
| !!! | TTCTATTCTGTTTCTGTTAA+AGG | + | chr5.4:3763632-3763651 | MS.gene024701:intron | 25.0% |
| AAACTTCGCTAATTCACTAA+GGG | - | chr5.4:3762670-3762689 | None:intergenic | 30.0% | |
| AAAGTTAGAATCAATTACGG+AGG | + | chr5.4:3762101-3762120 | MS.gene024701:intron | 30.0% | |
| AACAACATTTGTGTCTTGTA+AGG | - | chr5.4:3765024-3765043 | None:intergenic | 30.0% | |
| ACACCTATTCACAAATGAAA+AGG | - | chr5.4:3764388-3764407 | None:intergenic | 30.0% | |
| AGAAGTTGAGTTTGACTAAT+AGG | + | chr5.4:3762343-3762362 | MS.gene024701:intron | 30.0% | |
| AGTTGTCCAAGTACAATATT+AGG | + | chr5.4:3765883-3765902 | MS.gene024701:CDS | 30.0% | |
| ATCCCATAAAGTATGCATAA+AGG | + | chr5.4:3762741-3762760 | MS.gene024701:intron | 30.0% | |
| ATGGTATAACAAAACAAGTC+AGG | - | chr5.4:3765710-3765729 | None:intergenic | 30.0% | |
| CAAATAGGTTTCTTTCCAAT+AGG | - | chr5.4:3765511-3765530 | None:intergenic | 30.0% | |
| CATAATAGTTGAAATTGCCA+GGG | + | chr5.4:3765237-3765256 | MS.gene024701:CDS | 30.0% | |
| CATCCTTTATGCATACTTTA+TGG | - | chr5.4:3762747-3762766 | None:intergenic | 30.0% | |
| CTGGTTTCTGCAAAAATTAA+AGG | - | chr5.4:3761680-3761699 | None:intergenic | 30.0% | |
| GAAATGTGAAACAAATCCTT+AGG | - | chr5.4:3764366-3764385 | None:intergenic | 30.0% | |
| GTGTAGTTTAAGTGTTAGTT+TGG | + | chr5.4:3762845-3762864 | MS.gene024701:intron | 30.0% | |
| GTGTGGTATTTATTCAAATG+CGG | + | chr5.4:3764488-3764507 | MS.gene024701:CDS | 30.0% | |
| TAAACTTCGCTAATTCACTA+AGG | - | chr5.4:3762671-3762690 | None:intergenic | 30.0% | |
| TAACTGCCTAATATTGTACT+TGG | - | chr5.4:3765892-3765911 | None:intergenic | 30.0% | |
| TGAAAGGAATGGAAATAATC+TGG | - | chr5.4:3765372-3765391 | None:intergenic | 30.0% | |
| TGCTTTAGCAAAAAACTTAG+AGG | + | chr5.4:3762319-3762338 | MS.gene024701:intron | 30.0% | |
| TGGTATAACAAAACAAGTCA+GGG | - | chr5.4:3765709-3765728 | None:intergenic | 30.0% | |
| TTCCATTCCTTTCAAATCAA+CGG | + | chr5.4:3765378-3765397 | MS.gene024701:intron | 30.0% | |
| TTTGTTAATTAAGTAGTGGC+AGG | + | chr5.4:3764194-3764213 | MS.gene024701:intron | 30.0% | |
| ! | AGAACGATTTTGAACTCTAA+AGG | - | chr5.4:3764070-3764089 | None:intergenic | 30.0% |
| ! | CATACTATATTTTCCATCTC+AGG | - | chr5.4:3764031-3764050 | None:intergenic | 30.0% |
| ! | GGCTTTTGTTAATTAAGTAG+TGG | + | chr5.4:3764190-3764209 | MS.gene024701:intron | 30.0% |
| ! | TAATTCGTTTTACTACAGTG+AGG | + | chr5.4:3761930-3761949 | MS.gene024701:intron | 30.0% |
| ! | TGATTTGGGTGAAAAAAAAG+TGG | + | chr5.4:3763515-3763534 | MS.gene024701:CDS | 30.0% |
| ! | TTTTACGAAGAGCTAATTGA+TGG | + | chr5.4:3763126-3763145 | MS.gene024701:CDS | 30.0% |
| !!! | CTCGGAAGATTTTGATTTTT+GGG | + | chr5.4:3764244-3764263 | MS.gene024701:intron | 30.0% |
| !!! | CTTCAGCATTTTAGTTTATG+TGG | - | chr5.4:3765661-3765680 | None:intergenic | 30.0% |
| !!! | TCTCGGAAGATTTTGATTTT+TGG | + | chr5.4:3764243-3764262 | MS.gene024701:intron | 30.0% |
| AAGGCTACTAGTGATGATAA+AGG | + | chr5.4:3763405-3763424 | MS.gene024701:CDS | 35.0% | |
| AAGTTATACTCCAATGCACA+AGG | - | chr5.4:3764320-3764339 | None:intergenic | 35.0% | |
| AATAGAGAAGATACGTTGTG+AGG | - | chr5.4:3761593-3761612 | None:intergenic | 35.0% | |
| AATGCCGTGATATCAATTTG+CGG | - | chr5.4:3763087-3763106 | None:intergenic | 35.0% | |
| ACAAGTGAAAGAAGGAAACA+TGG | - | chr5.4:3763994-3764013 | None:intergenic | 35.0% | |
| AGTCTCATGTTATGCTTCAA+AGG | + | chr5.4:3764697-3764716 | MS.gene024701:CDS | 35.0% | |
| ATGAAAAAACCTTGAACACC+AGG | - | chr5.4:3761729-3761748 | None:intergenic | 35.0% | |
| ATTAACTTAAAGAGAGTGGG+TGG | + | chr5.4:3762869-3762888 | MS.gene024701:intron | 35.0% | |
| ATTCAAATGCGGAAGAAAGA+TGG | + | chr5.4:3764499-3764518 | MS.gene024701:CDS | 35.0% | |
| ATTTCACACAAAACATTGGG+TGG | - | chr5.4:3765446-3765465 | None:intergenic | 35.0% | |
| CCATAATAGTTGAAATTGCC+AGG | + | chr5.4:3765236-3765255 | MS.gene024701:CDS | 35.0% | |
| CCTGGCAATTTCAACTATTA+TGG | - | chr5.4:3765239-3765258 | None:intergenic | 35.0% | |
| CTATTGGAAACATCCAGTTT+AGG | - | chr5.4:3763303-3763322 | None:intergenic | 35.0% | |
| GAAAGCGGTTATAAGAGAAA+AGG | - | chr5.4:3761829-3761848 | None:intergenic | 35.0% | |
| GAAGAAACTTCTGTTAAGGA+AGG | + | chr5.4:3762708-3762727 | MS.gene024701:intron | 35.0% | |
| GATGGAAATAATTGATGCTG+TGG | + | chr5.4:3765162-3765181 | MS.gene024701:CDS | 35.0% | |
| GATGGAAGAAACTTCTGTTA+AGG | + | chr5.4:3762704-3762723 | MS.gene024701:intron | 35.0% | |
| GGCATTAACTTAAAGAGAGT+GGG | + | chr5.4:3762866-3762885 | MS.gene024701:intron | 35.0% | |
| GTGCATTGGAGTATAACTTT+GGG | + | chr5.4:3764321-3764340 | MS.gene024701:intron | 35.0% | |
| TACTTCATCTACTCTTGCTT+TGG | + | chr5.4:3765546-3765565 | MS.gene024701:intron | 35.0% | |
| TCAGATCCTCCTAAAATTGA+TGG | + | chr5.4:3763360-3763379 | MS.gene024701:CDS | 35.0% | |
| TGAAAAAACCTTGAACACCA+GGG | - | chr5.4:3761728-3761747 | None:intergenic | 35.0% | |
| TGAAATTGAAAGAAGAGGTG+AGG | - | chr5.4:3761619-3761638 | None:intergenic | 35.0% | |
| TGCATTGGAGTATAACTTTG+GGG | + | chr5.4:3764322-3764341 | MS.gene024701:intron | 35.0% | |
| TGGCATTAACTTAAAGAGAG+TGG | + | chr5.4:3762865-3762884 | MS.gene024701:intron | 35.0% | |
| TGTGCATTGGAGTATAACTT+TGG | + | chr5.4:3764320-3764339 | MS.gene024701:intron | 35.0% | |
| TTACTGAGGTCAACTTTATG+AGG | - | chr5.4:3765205-3765224 | None:intergenic | 35.0% | |
| TTCAAAAAATGGCTGCTACT+CGG | - | chr5.4:3765333-3765352 | None:intergenic | 35.0% | |
| TTGCAGAAACCAGTGAAAAA+GGG | + | chr5.4:3761687-3761706 | MS.gene024701:intron | 35.0% | |
| TTTCACCTGTTTCATTGTCA+TGG | - | chr5.4:3763338-3763357 | None:intergenic | 35.0% | |
| TTTGCAGAAACCAGTGAAAA+AGG | + | chr5.4:3761686-3761705 | MS.gene024701:intron | 35.0% | |
| ! | ACTAATGCATGCTGTTTGTT+TGG | + | chr5.4:3765820-3765839 | MS.gene024701:intron | 35.0% |
| ! | CTCATCAGCTATCTTTTCTA+TGG | - | chr5.4:3763451-3763470 | None:intergenic | 35.0% |
| ! | GCATGCAAACCATCAATTTT+AGG | - | chr5.4:3763372-3763391 | None:intergenic | 35.0% |
| ! | GCTATCTTTTCTATGGTCTT+AGG | - | chr5.4:3763444-3763463 | None:intergenic | 35.0% |
| ! | GCTTTGCTCAAACTTTTATG+TGG | + | chr5.4:3763700-3763719 | MS.gene024701:intron | 35.0% |
| ! | TAATTCACTAAGGGTGTGTT+TGG | - | chr5.4:3762661-3762680 | None:intergenic | 35.0% |
| ! | TGCAAACCATCAATTTTAGG+AGG | - | chr5.4:3763369-3763388 | None:intergenic | 35.0% |
| ! | TGTATGTTTGGTTCCACTTT+GGG | - | chr5.4:3762201-3762220 | None:intergenic | 35.0% |
| ! | TTTTCACCCAAATCACTTGT+TGG | - | chr5.4:3763510-3763529 | None:intergenic | 35.0% |
| !! | GTAATAGCCGTTGATTTGAA+AGG | - | chr5.4:3765388-3765407 | None:intergenic | 35.0% |
| !!! | TGGTTTTATCAGGATTACTG+AGG | - | chr5.4:3765219-3765238 | None:intergenic | 35.0% |
| !!! | TTTTAGGGTGTGTTTCGATT+GGG | + | chr5.4:3762420-3762439 | MS.gene024701:intron | 35.0% |
| AAAGGAGGACAAGTGAAAGA+AGG | - | chr5.4:3764002-3764021 | None:intergenic | 40.0% | |
| AAATGCGCCAACAAGTGATT+TGG | + | chr5.4:3763500-3763519 | MS.gene024701:CDS | 40.0% | |
| AAATTCAGCCTTTCTTACCC+TGG | - | chr5.4:3765257-3765276 | None:intergenic | 40.0% | |
| AAGAAACGCTGATACATTGC+TGG | + | chr5.4:3764637-3764656 | MS.gene024701:intron | 40.0% | |
| AATGCGCCAACAAGTGATTT+GGG | + | chr5.4:3763501-3763520 | MS.gene024701:CDS | 40.0% | |
| ACATTGGGTGGATGATTTAG+CGG | - | chr5.4:3765434-3765453 | None:intergenic | 40.0% | |
| ACTAGCCATGACAATGAAAC+AGG | + | chr5.4:3763330-3763349 | MS.gene024701:CDS | 40.0% | |
| AGAACTGAGAGACAAGAGTA+AGG | + | chr5.4:3763578-3763597 | MS.gene024701:CDS | 40.0% | |
| ATACACTGTGGATCTGCTTA+TGG | + | chr5.4:3762795-3762814 | MS.gene024701:intron | 40.0% | |
| ATGCACAGTATTACCTTCTG+TGG | - | chr5.4:3764785-3764804 | None:intergenic | 40.0% | |
| ATGCCGTGATATCAATTTGC+GGG | - | chr5.4:3763086-3763105 | None:intergenic | 40.0% | |
| ATGGCTAGTATTGTCGCTAT+TGG | - | chr5.4:3763319-3763338 | None:intergenic | 40.0% | |
| ATTACAACCCGATTCAAGCT+TGG | - | chr5.4:3764467-3764486 | None:intergenic | 40.0% | |
| CTCATGTTATGCTTCAAAGG+AGG | + | chr5.4:3764700-3764719 | MS.gene024701:CDS | 40.0% | |
| GACTTCTTGCTTCTCTTCAA+TGG | + | chr5.4:3765582-3765601 | MS.gene024701:intron | 40.0% | |
| GCACAAGGAACTGAAGAATT+AGG | - | chr5.4:3764305-3764324 | None:intergenic | 40.0% | |
| GCATAACATGAGACTTCGAT+AGG | - | chr5.4:3764692-3764711 | None:intergenic | 40.0% | |
| GGAAACTCAAAATCCACAGA+AGG | + | chr5.4:3764769-3764788 | MS.gene024701:CDS | 40.0% | |
| GTGTGTAAACTTTGTGCGAT+AGG | - | chr5.4:3764843-3764862 | None:intergenic | 40.0% | |
| TCAAAAAATGGCTGCTACTC+GGG | - | chr5.4:3765332-3765351 | None:intergenic | 40.0% | |
| TGAAATTGCCAGGGTAAGAA+AGG | + | chr5.4:3765246-3765265 | MS.gene024701:intron | 40.0% | |
| TGTCCCGCAAATTGATATCA+CGG | + | chr5.4:3763080-3763099 | MS.gene024701:intron | 40.0% | |
| TGTGAAACAAATCCTTAGGC+AGG | - | chr5.4:3764362-3764381 | None:intergenic | 40.0% | |
| TTCCATCTCAGGAGTCATAA+AGG | - | chr5.4:3764020-3764039 | None:intergenic | 40.0% | |
| TTCTTCAGTTCCTTGTGCAT+TGG | + | chr5.4:3764307-3764326 | MS.gene024701:intron | 40.0% | |
| ! | AAGCTTGAATCGGGTTGTAA+TGG | + | chr5.4:3764466-3764485 | MS.gene024701:CDS | 40.0% |
| ! | AATTGATGGTTTGCATGCTC+AGG | + | chr5.4:3763374-3763393 | MS.gene024701:CDS | 40.0% |
| ! | ATACATTGCTGGCTACTTCT+AGG | + | chr5.4:3764648-3764667 | MS.gene024701:intron | 40.0% |
| ! | CGATAGTAAAGCTACTTTCC+AGG | - | chr5.4:3764902-3764921 | None:intergenic | 40.0% |
| ! | GTGTATGTTTGGTTCCACTT+TGG | - | chr5.4:3762202-3762221 | None:intergenic | 40.0% |
| ! | TAGGTGTGTGTTTTGCTAAG+AGG | + | chr5.4:3764401-3764420 | MS.gene024701:intron | 40.0% |
| ! | TTTAGGGTGTGTTTCGATTG+GGG | + | chr5.4:3762421-3762440 | MS.gene024701:intron | 40.0% |
| ! | TTTTTCATCACTTGCGATGG+TGG | + | chr5.4:3761741-3761760 | MS.gene024701:CDS | 40.0% |
| !! | AAATACTGGTGTTGACAGGA+TGG | + | chr5.4:3765144-3765163 | MS.gene024701:CDS | 40.0% |
| !! | AGCCGTTGATTTGAAAGGAA+TGG | - | chr5.4:3765383-3765402 | None:intergenic | 40.0% |
| !!! | CTGTGGATTTTGAGTTTCCA+CGG | - | chr5.4:3764768-3764787 | None:intergenic | 40.0% |
| !!! | CTTTTAGGGTGTGTTTCGAT+TGG | + | chr5.4:3762419-3762438 | MS.gene024701:intron | 40.0% |
| !!! | GGTTTTTTCATCACTTGCGA+TGG | + | chr5.4:3761738-3761757 | MS.gene024701:CDS | 40.0% |
| !!! | TGTGGATTTTGAGTTTCCAC+GGG | - | chr5.4:3764767-3764786 | None:intergenic | 40.0% |
| AAAAGCAATCCAGCCTCTTG+TGG | + | chr5.4:3764730-3764749 | MS.gene024701:CDS | 45.0% | |
| AAAGATAGCTGATGAGCCAC+CGG | + | chr5.4:3763455-3763474 | MS.gene024701:CDS | 45.0% | |
| AATATTGAGAGCTTCGCGAG+TGG | - | chr5.4:3761781-3761800 | None:intergenic | 45.0% | |
| ACGCTTTGCCAAGCTTGAAT+CGG | + | chr5.4:3764456-3764475 | MS.gene024701:CDS | 45.0% | |
| AGAAGGAAGTGAGGAAAAGG+AGG | + | chr5.4:3763269-3763288 | MS.gene024701:CDS | 45.0% | |
| AGGTCAACTTTATGAGGTGC+AGG | - | chr5.4:3765199-3765218 | None:intergenic | 45.0% | |
| ATCCGGTTAACGATCTCGTT+GGG | - | chr5.4:3764535-3764554 | None:intergenic | 45.0% | |
| ATGCTGCTGATGTCACTATC+CGG | - | chr5.4:3764552-3764571 | None:intergenic | 45.0% | |
| ATTGGGTGGATGATTTAGCG+GGG | - | chr5.4:3765432-3765451 | None:intergenic | 45.0% | |
| CATCTCAGGAGTCATAAAGG+AGG | - | chr5.4:3764017-3764036 | None:intergenic | 45.0% | |
| CATTGGGTGGATGATTTAGC+GGG | - | chr5.4:3765433-3765452 | None:intergenic | 45.0% | |
| CGACTAGGAAACATATGTCG+AGG | + | chr5.4:3764572-3764591 | MS.gene024701:CDS | 45.0% | |
| CGGGAAATACATGGCATGAT+GGG | - | chr5.4:3765313-3765332 | None:intergenic | 45.0% | |
| CTCCTTTATGACTCCTGAGA+TGG | + | chr5.4:3764015-3764034 | MS.gene024701:intron | 45.0% | |
| GAGCATTTCTCACCGAAAGA+TGG | - | chr5.4:3765729-3765748 | None:intergenic | 45.0% | |
| GGAGGACAAAAAGCCTAAAC+TGG | + | chr5.4:3763287-3763306 | MS.gene024701:CDS | 45.0% | |
| TATCCGGTTAACGATCTCGT+TGG | - | chr5.4:3764536-3764555 | None:intergenic | 45.0% | |
| TCATCTACTCTTGCTTTGGC+TGG | + | chr5.4:3765550-3765569 | MS.gene024701:intron | 45.0% | |
| TCGGACAACTTTGTCACACT+TGG | - | chr5.4:3763159-3763178 | None:intergenic | 45.0% | |
| TCGGGAAATACATGGCATGA+TGG | - | chr5.4:3765314-3765333 | None:intergenic | 45.0% | |
| TGGCAGACTGTTTGCTTGAT+CGG | + | chr5.4:3765840-3765859 | MS.gene024701:intron | 45.0% | |
| TGTCAACACCAGTATTTGCC+CGG | - | chr5.4:3765141-3765160 | None:intergenic | 45.0% | |
| TGTGTTTCGATTGGGGGTTT+AGG | + | chr5.4:3762428-3762447 | MS.gene024701:intron | 45.0% | |
| TGTGTTTGGATGGAGGGTTT+AGG | - | chr5.4:3762647-3762666 | None:intergenic | 45.0% | |
| TTAGGGTGTGTTTCGATTGG+GGG | + | chr5.4:3762422-3762441 | MS.gene024701:intron | 45.0% | |
| TTCCAGTAGTGACGATGATG+AGG | + | chr5.4:3763221-3763240 | MS.gene024701:CDS | 45.0% | |
| TTGCTGTGATGTATGAAGCC+CGG | + | chr5.4:3765119-3765138 | MS.gene024701:CDS | 45.0% | |
| TTTCGATTGGGGGTTTAGGA+GGG | + | chr5.4:3762432-3762451 | MS.gene024701:intron | 45.0% | |
| TTTGGATGGAGGGTTTAGGA+GGG | - | chr5.4:3762643-3762662 | None:intergenic | 45.0% | |
| ! | ATGTTTGGTTCCACTTTGGG+AGG | - | chr5.4:3762198-3762217 | None:intergenic | 45.0% |
| ! | GCGTTTTCTCTTCTTTCCAC+CGG | - | chr5.4:3761564-3761583 | None:intergenic | 45.0% |
| ! | TAAGGGTGTGTTTGGATGGA+GGG | - | chr5.4:3762653-3762672 | None:intergenic | 45.0% |
| ! | TCACTAAGGGTGTGTTTGGA+TGG | - | chr5.4:3762657-3762676 | None:intergenic | 45.0% |
| ! | TCCTTTTCCTCACTTCCTTC+TGG | - | chr5.4:3763270-3763289 | None:intergenic | 45.0% |
| ! | TGAATCGGGTTGTAATGGTG+TGG | + | chr5.4:3764471-3764490 | MS.gene024701:CDS | 45.0% |
| ! | TTTTCTCTTCTTTCCACCGG+CGG | - | chr5.4:3761561-3761580 | None:intergenic | 45.0% |
| !! | AATTTTGGCACCTCCCAAAG+TGG | + | chr5.4:3762185-3762204 | MS.gene024701:intron | 45.0% |
| !! | AGTATAACTTTGGGGCACTG+GGG | + | chr5.4:3764330-3764349 | MS.gene024701:intron | 45.0% |
| !! | GAGTATAACTTTGGGGCACT+GGG | + | chr5.4:3764329-3764348 | MS.gene024701:intron | 45.0% |
| !! | GGATACGAACCCTTTTTCAC+TGG | - | chr5.4:3761699-3761718 | None:intergenic | 45.0% |
| !! | AAAAAAAAATAAAAAATTCA+TGG | - | chr5.4:3761851-3761870 | None:intergenic | 5.0% |
| CAGTAGTGACGATGATGAGG+AGG | + | chr5.4:3763224-3763243 | MS.gene024701:CDS | 50.0% | |
| CCATTACACCCTGGTGTTCA+AGG | + | chr5.4:3761717-3761736 | MS.gene024701:CDS | 50.0% | |
| CCTTGAACACCAGGGTGTAA+TGG | - | chr5.4:3761720-3761739 | None:intergenic | 50.0% | |
| CGCTTTGCCAAGCTTGAATC+GGG | + | chr5.4:3764457-3764476 | MS.gene024701:CDS | 50.0% | |
| CTCCTCATCATCGTCACTAC+TGG | - | chr5.4:3763226-3763245 | None:intergenic | 50.0% | |
| CTTATCCCACCAAGTGCAGT+CGG | - | chr5.4:3763804-3763823 | None:intergenic | 50.0% | |
| GCAAAGCATGAGAGCAATCC+TGG | + | chr5.4:3764881-3764900 | MS.gene024701:intron | 50.0% | |
| GCAGACTGTTTGCTTGATCG+GGG | + | chr5.4:3765842-3765861 | MS.gene024701:intron | 50.0% | |
| GCCAGAAGGAAGTGAGGAAA+AGG | + | chr5.4:3763266-3763285 | MS.gene024701:CDS | 50.0% | |
| GCTGCTACTCGGGAAATACA+TGG | - | chr5.4:3765322-3765341 | None:intergenic | 50.0% | |
| GGCAGACTGTTTGCTTGATC+GGG | + | chr5.4:3765841-3765860 | MS.gene024701:intron | 50.0% | |
| GGTTCGTATCCATTACACCC+TGG | + | chr5.4:3761708-3761727 | MS.gene024701:CDS | 50.0% | |
| GTCAACACCAGTATTTGCCC+GGG | - | chr5.4:3765140-3765159 | None:intergenic | 50.0% | |
| GTTTCGATTGGGGGTTTAGG+AGG | + | chr5.4:3762431-3762450 | MS.gene024701:intron | 50.0% | |
| GTTTGGATGGAGGGTTTAGG+AGG | - | chr5.4:3762644-3762663 | None:intergenic | 50.0% | |
| TATGAAGCCCGGGCAAATAC+TGG | + | chr5.4:3765130-3765149 | MS.gene024701:CDS | 50.0% | |
| TCCGGTTAACGATCTCGTTG+GGG | - | chr5.4:3764534-3764553 | None:intergenic | 50.0% | |
| TGACGATGATGAGGAGGAAG+AGG | + | chr5.4:3763230-3763249 | MS.gene024701:CDS | 50.0% | |
| TGATGAGGAGGAAGAGGAGA+AGG | + | chr5.4:3763236-3763255 | MS.gene024701:CDS | 50.0% | |
| TGCTGTGATGTATGAAGCCC+GGG | + | chr5.4:3765120-3765139 | MS.gene024701:CDS | 50.0% | |
| TTCGATTGGGGGTTTAGGAG+GGG | + | chr5.4:3762433-3762452 | MS.gene024701:intron | 50.0% | |
| TTGCAGCACTCTTTCACAGC+CGG | - | chr5.4:3763477-3763496 | None:intergenic | 50.0% | |
| TTGGATGGAGGGTTTAGGAG+GGG | - | chr5.4:3762642-3762661 | None:intergenic | 50.0% | |
| TTGGGTGGATGATTTAGCGG+GGG | - | chr5.4:3765431-3765450 | None:intergenic | 50.0% | |
| ! | ATGGTTTGCATGCTCAGGCT+GGG | + | chr5.4:3763379-3763398 | MS.gene024701:CDS | 50.0% |
| ! | CGGGGTCATTGAGAAGTACA+AGG | + | chr5.4:3765860-3765879 | MS.gene024701:CDS | 50.0% |
| ! | CTAAGGGTGTGTTTGGATGG+AGG | - | chr5.4:3762654-3762673 | None:intergenic | 50.0% |
| !! | GGAAAGTACTGCTCCACAAG+AGG | - | chr5.4:3764746-3764765 | None:intergenic | 50.0% |
| !! | GGAGTATAACTTTGGGGCAC+TGG | + | chr5.4:3764328-3764347 | MS.gene024701:intron | 50.0% |
| !! | GGGCAAATACTGGTGTTGAC+AGG | + | chr5.4:3765140-3765159 | MS.gene024701:CDS | 50.0% |
| !! | TGACATCAGCAGCATCGACT+AGG | + | chr5.4:3764557-3764576 | MS.gene024701:CDS | 50.0% |
| ACCAAGTGCAGTCGGCTACA+TGG | - | chr5.4:3763796-3763815 | None:intergenic | 55.0% | |
| AGTACTGCTCCACAAGAGGC+TGG | - | chr5.4:3764742-3764761 | None:intergenic | 55.0% | |
| ATGGAGGGTTTAGGAGGGGA+AGG | - | chr5.4:3762638-3762657 | None:intergenic | 55.0% | |
| ATGTAGCCGACTGCACTTGG+TGG | + | chr5.4:3763795-3763814 | MS.gene024701:intron | 55.0% | |
| GCAAGTGCCAGAAGGAAGTG+AGG | + | chr5.4:3763260-3763279 | MS.gene024701:CDS | 55.0% | |
| GCCCCAACGAGATCGTTAAC+CGG | + | chr5.4:3764530-3764549 | MS.gene024701:CDS | 55.0% | |
| TCCATGTAGCCGACTGCACT+TGG | + | chr5.4:3763792-3763811 | MS.gene024701:intron | 55.0% | |
| TGGAGGGTTTAGGAGGGGAA+GGG | - | chr5.4:3762637-3762656 | None:intergenic | 55.0% | |
| TGTAGCCGACTGCACTTGGT+GGG | + | chr5.4:3763796-3763815 | MS.gene024701:intron | 55.0% | |
| TGTGGAGCAGTACTTTCCCG+TGG | + | chr5.4:3764748-3764767 | MS.gene024701:CDS | 55.0% | |
| ! | CGACTGCACTTGGTGGGATA+AGG | + | chr5.4:3763802-3763821 | MS.gene024701:intron | 55.0% |
| ! | GATGGTTTGCATGCTCAGGC+TGG | + | chr5.4:3763378-3763397 | MS.gene024701:CDS | 55.0% |
| ! | GCACTTGGTGGGATAAGGCT+TGG | + | chr5.4:3763807-3763826 | MS.gene024701:intron | 55.0% |
| ! | TGGTTTGCATGCTCAGGCTG+GGG | + | chr5.4:3763380-3763399 | MS.gene024701:CDS | 55.0% |
| AGGGTTTAGGAGGGGAAGGG+AGG | - | chr5.4:3762634-3762653 | None:intergenic | 60.0% | |
| CAGCACTCTTTCACAGCCGG+TGG | - | chr5.4:3763474-3763493 | None:intergenic | 60.0% | |
| GCATGCTCAGGCTGGGGATA+AGG | + | chr5.4:3763386-3763405 | MS.gene024701:CDS | 60.0% | |
| GGGTTTAGGAGGGGAAGCGA+GGG | + | chr5.4:3762442-3762461 | MS.gene024701:intron | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | - | chr5.4:3762633-3762652 | None:intergenic | 60.0% | |
| GGTTTAGGAGGGGAAGCGAG+GGG | + | chr5.4:3762443-3762462 | MS.gene024701:intron | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | - | chr5.4:3762632-3762651 | None:intergenic | 60.0% | |
| TCTCTTCTTTCCACCGGCGG+CGG | - | chr5.4:3761558-3761577 | None:intergenic | 60.0% | |
| ! | GAGAAGGCGCAAGTGCCAGA+AGG | + | chr5.4:3763252-3763271 | MS.gene024701:CDS | 60.0% |
| GGGGTTTAGGAGGGGAAGCG+AGG | + | chr5.4:3762441-3762460 | MS.gene024701:intron | 65.0% | |
| TAGGAGGGGAAGCGAGGGGA+GGG | + | chr5.4:3762447-3762466 | MS.gene024701:intron | 65.0% | |
| TTAGGAGGGGAAGCGAGGGG+AGG | + | chr5.4:3762446-3762465 | MS.gene024701:intron | 65.0% | |
| !! | ACTTTGGGGCACTGGGGCTG+AGG | + | chr5.4:3764336-3764355 | MS.gene024701:intron | 65.0% |
| ACCGGCGGCGGCAGCAGTAT+CGG | - | chr5.4:3761546-3761565 | None:intergenic | 70.0% | |
| AGGAGGGGAAGGGAGGGGAG+AGG | - | chr5.4:3762627-3762646 | None:intergenic | 70.0% | |
| CTGGGGCTGAGGCCTGCCTA+AGG | + | chr5.4:3764347-3764366 | MS.gene024701:intron | 70.0% | |
| GGAGGGGAAGGGAGGGGAGA+GGG | - | chr5.4:3762626-3762645 | None:intergenic | 70.0% | |
| CCCGATACTGCTGCCGCCGC+CGG | + | chr5.4:3761542-3761561 | MS.gene024701:CDS | 75.0% | |
| CCGGCGGCGGCAGCAGTATC+GGG | - | chr5.4:3761545-3761564 | None:intergenic | 75.0% | |
| GATACTGCTGCCGCCGCCGG+TGG | + | chr5.4:3761545-3761564 | MS.gene024701:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 3761536 | 3765929 | 3761536 | ID=MS.gene024701 |
| chr5.4 | mRNA | 3761536 | 3765929 | 3761536 | ID=MS.gene024701.t1;Parent=MS.gene024701 |
| chr5.4 | exon | 3761536 | 3761598 | 3761536 | ID=MS.gene024701.t1.exon1;Parent=MS.gene024701.t1 |
| chr5.4 | CDS | 3761536 | 3761598 | 3761536 | ID=cds.MS.gene024701.t1;Parent=MS.gene024701.t1 |
| chr5.4 | exon | 3761693 | 3761809 | 3761693 | ID=MS.gene024701.t1.exon2;Parent=MS.gene024701.t1 |
| chr5.4 | CDS | 3761693 | 3761809 | 3761693 | ID=cds.MS.gene024701.t1;Parent=MS.gene024701.t1 |
| chr5.4 | exon | 3763126 | 3763599 | 3763126 | ID=MS.gene024701.t1.exon3;Parent=MS.gene024701.t1 |
| chr5.4 | CDS | 3763126 | 3763599 | 3763126 | ID=cds.MS.gene024701.t1;Parent=MS.gene024701.t1 |
| chr5.4 | exon | 3764454 | 3764593 | 3764454 | ID=MS.gene024701.t1.exon4;Parent=MS.gene024701.t1 |
| chr5.4 | CDS | 3764454 | 3764593 | 3764454 | ID=cds.MS.gene024701.t1;Parent=MS.gene024701.t1 |
| chr5.4 | exon | 3764670 | 3764790 | 3764670 | ID=MS.gene024701.t1.exon5;Parent=MS.gene024701.t1 |
| chr5.4 | CDS | 3764670 | 3764790 | 3764670 | ID=cds.MS.gene024701.t1;Parent=MS.gene024701.t1 |
| chr5.4 | exon | 3765118 | 3765258 | 3765118 | ID=MS.gene024701.t1.exon6;Parent=MS.gene024701.t1 |
| chr5.4 | CDS | 3765118 | 3765258 | 3765118 | ID=cds.MS.gene024701.t1;Parent=MS.gene024701.t1 |
| chr5.4 | exon | 3765846 | 3765929 | 3765846 | ID=MS.gene024701.t1.exon7;Parent=MS.gene024701.t1 |
| chr5.4 | CDS | 3765846 | 3765929 | 3765846 | ID=cds.MS.gene024701.t1;Parent=MS.gene024701.t1 |
| Gene Sequence |
| Protein sequence |
