Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21951.t1 | XP_003610966.1 | 97.4 | 379 | 9 | 1 | 1 | 379 | 1 | 378 | 6.30E-185 | 656.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21951.t1 | Q99J36 | 32.5 | 197 | 123 | 4 | 184 | 377 | 81 | 270 | 6.5e-21 | 103.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21951.t1 | G7K999 | 97.4 | 379 | 9 | 1 | 1 | 379 | 1 | 378 | 4.5e-185 | 656.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21951.t1 | MTR_5g009010 | 96.834 | 379 | 11 | 1 | 1 | 379 | 1 | 378 | 0.0 | 745 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21951.t1 | AT5G12410 | 55.291 | 378 | 146 | 6 | 12 | 377 | 9 | 375 | 5.12e-134 | 388 |
Find 82 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGGCAATTTCAACTATTA+TGG | 0.192469 | 5.1:-2944075 | None:intergenic |
| TTTGCAGAAACCAGTGAAAA+AGG | 0.213652 | 5.1:+2940524 | MS.gene21951:intron |
| GGCAGACTGTTTGCTTGATC+GGG | 0.303852 | 5.1:+2944680 | MS.gene21951:intron |
| AAATGCGCCAACAAGTGATT+TGG | 0.316855 | 5.1:+2942339 | MS.gene21951:CDS |
| TCAGATCCTCCTAAAATTGA+TGG | 0.322675 | 5.1:+2942199 | MS.gene21951:CDS |
| CCCGATACTGCTGCCGCCGC+CGG | 0.331092 | 5.1:+2940380 | MS.gene21951:CDS |
| CGCTTTGCCAAGCTTGAATC+GGG | 0.363345 | 5.1:+2943296 | MS.gene21951:CDS |
| ACCGGCGGCGGCAGCAGTAT+CGG | 0.364568 | 5.1:-2940381 | None:intergenic |
| ATCCGGTTAACGATCTCGTT+GGG | 0.365210 | 5.1:-2943371 | None:intergenic |
| CCATTACACCCTGGTGTTCA+AGG | 0.375474 | 5.1:+2940555 | MS.gene21951:CDS |
| CCGGCGGCGGCAGCAGTATC+GGG | 0.387466 | 5.1:-2940380 | None:intergenic |
| GCATGCTCAGGCTGGGGATA+AGG | 0.395820 | 5.1:+2942225 | MS.gene21951:CDS |
| ATCTTCAATTAACTTATCAA+TGG | 0.396744 | 5.1:-2942386 | None:intergenic |
| CTCCTCATCATCGTCACTAC+TGG | 0.397151 | 5.1:-2942062 | None:intergenic |
| ATGGCTAGTATTGTCGCTAT+TGG | 0.397862 | 5.1:-2942155 | None:intergenic |
| CTATTGGAAACATCCAGTTT+AGG | 0.400292 | 5.1:-2942139 | None:intergenic |
| TATGAAGCCCGGGCAAATAC+TGG | 0.408924 | 5.1:+2943969 | MS.gene21951:CDS |
| TGGCAGACTGTTTGCTTGAT+CGG | 0.410558 | 5.1:+2944679 | MS.gene21951:intron |
| TGACGATGATGAGGAGGAAG+AGG | 0.418381 | 5.1:+2942069 | MS.gene21951:CDS |
| ACGCTTTGCCAAGCTTGAAT+CGG | 0.426317 | 5.1:+2943295 | MS.gene21951:CDS |
| TTTCACCTGTTTCATTGTCA+TGG | 0.428481 | 5.1:-2942174 | None:intergenic |
| AGTTGTCCAAGTACAATATT+AGG | 0.433079 | 5.1:+2944722 | MS.gene21951:CDS |
| CCTTGAACACCAGGGTGTAA+TGG | 0.434065 | 5.1:-2940555 | None:intergenic |
| AATGCGCCAACAAGTGATTT+GGG | 0.444791 | 5.1:+2942340 | MS.gene21951:CDS |
| CCATAATAGTTGAAATTGCC+AGG | 0.445233 | 5.1:+2944075 | MS.gene21951:CDS |
| ATGGTTTGCATGCTCAGGCT+GGG | 0.458167 | 5.1:+2942218 | MS.gene21951:CDS |
| GATGGTTTGCATGCTCAGGC+TGG | 0.459066 | 5.1:+2942217 | MS.gene21951:CDS |
| ACTAGCCATGACAATGAAAC+AGG | 0.461113 | 5.1:+2942169 | MS.gene21951:CDS |
| TCGGACAACTTTGTCACACT+TGG | 0.474464 | 5.1:-2941995 | None:intergenic |
| GCCAGAAGGAAGTGAGGAAA+AGG | 0.476120 | 5.1:+2942105 | MS.gene21951:CDS |
| ATTCAAATGCGGAAGAAAGA+TGG | 0.476734 | 5.1:+2943338 | MS.gene21951:CDS |
| TTACTGAGGTCAACTTTATG+AGG | 0.482532 | 5.1:-2944041 | None:intergenic |
| AAGGCTACTAGTGATGATAA+AGG | 0.486381 | 5.1:+2942244 | MS.gene21951:CDS |
| AATTGATGGTTTGCATGCTC+AGG | 0.494441 | 5.1:+2942213 | MS.gene21951:CDS |
| TAACTGCCTAATATTGTACT+TGG | 0.498069 | 5.1:-2944728 | None:intergenic |
| GCCCCAACGAGATCGTTAAC+CGG | 0.500331 | 5.1:+2943369 | MS.gene21951:CDS |
| AAAAGCAATCCAGCCTCTTG+TGG | 0.500551 | 5.1:+2943569 | MS.gene21951:CDS |
| AGTACTGCTCCACAAGAGGC+TGG | 0.501229 | 5.1:-2943578 | None:intergenic |
| AGGTCAACTTTATGAGGTGC+AGG | 0.509742 | 5.1:-2944035 | None:intergenic |
| TGTCAACACCAGTATTTGCC+CGG | 0.510087 | 5.1:-2943977 | None:intergenic |
| GATACTGCTGCCGCCGCCGG+TGG | 0.511273 | 5.1:+2940383 | MS.gene21951:CDS |
| TTGCAGCACTCTTTCACAGC+CGG | 0.524969 | 5.1:-2942313 | None:intergenic |
| ATTACAACCCGATTCAAGCT+TGG | 0.528495 | 5.1:-2943303 | None:intergenic |
| ATGCTGCTGATGTCACTATC+CGG | 0.531589 | 5.1:-2943388 | None:intergenic |
| AGAACTGAGAGACAAGAGTA+AGG | 0.536916 | 5.1:+2942417 | MS.gene21951:CDS |
| GGGCAAATACTGGTGTTGAC+AGG | 0.537044 | 5.1:+2943979 | MS.gene21951:CDS |
| TATCCGGTTAACGATCTCGT+TGG | 0.539404 | 5.1:-2943372 | None:intergenic |
| TGGTTTGCATGCTCAGGCTG+GGG | 0.542396 | 5.1:+2942219 | MS.gene21951:CDS |
| AAAGGCTCATGCTTTACTTG+AGG | 0.548357 | 5.1:-2944752 | None:intergenic |
| TGCTGTGATGTATGAAGCCC+GGG | 0.549023 | 5.1:+2943959 | MS.gene21951:CDS |
| AAGCTTGAATCGGGTTGTAA+TGG | 0.554079 | 5.1:+2943305 | MS.gene21951:CDS |
| TGATGAGGAGGAAGAGGAGA+AGG | 0.556136 | 5.1:+2942075 | MS.gene21951:CDS |
| TTGCTGTGATGTATGAAGCC+CGG | 0.561353 | 5.1:+2943958 | MS.gene21951:CDS |
| CAGCACTCTTTCACAGCCGG+TGG | 0.561979 | 5.1:-2942310 | None:intergenic |
| CGGGGTCATTGAGAAGTACA+AGG | 0.563046 | 5.1:+2944699 | MS.gene21951:CDS |
| AGTCTCATGTTATGCTTCAA+AGG | 0.565719 | 5.1:+2943536 | MS.gene21951:CDS |
| ATGCACAGTATTACCTTCTG+TGG | 0.570175 | 5.1:-2943621 | None:intergenic |
| GTCAACACCAGTATTTGCCC+GGG | 0.570407 | 5.1:-2943976 | None:intergenic |
| TGACATCAGCAGCATCGACT+AGG | 0.577556 | 5.1:+2943396 | MS.gene21951:CDS |
| TCCGGTTAACGATCTCGTTG+GGG | 0.579623 | 5.1:-2943370 | None:intergenic |
| GAGAAGGCGCAAGTGCCAGA+AGG | 0.586468 | 5.1:+2942091 | MS.gene21951:CDS |
| GCAGACTGTTTGCTTGATCG+GGG | 0.589916 | 5.1:+2944681 | MS.gene21951:intron |
| AAAGATAGCTGATGAGCCAC+CGG | 0.594350 | 5.1:+2942294 | MS.gene21951:CDS |
| TCTCTTCTTTCCACCGGCGG+CGG | 0.600339 | 5.1:-2940393 | None:intergenic |
| GTGTGGTATTTATTCAAATG+CGG | 0.602556 | 5.1:+2943327 | MS.gene21951:CDS |
| AAATACTGGTGTTGACAGGA+TGG | 0.603355 | 5.1:+2943983 | MS.gene21951:CDS |
| TTCCAGTAGTGACGATGATG+AGG | 0.604964 | 5.1:+2942060 | MS.gene21951:CDS |
| AGAAGGAAGTGAGGAAAAGG+AGG | 0.606127 | 5.1:+2942108 | MS.gene21951:CDS |
| CATAATAGTTGAAATTGCCA+GGG | 0.614211 | 5.1:+2944076 | MS.gene21951:CDS |
| TGTGGAGCAGTACTTTCCCG+TGG | 0.617448 | 5.1:+2943587 | MS.gene21951:CDS |
| GCATAACATGAGACTTCGAT+AGG | 0.618502 | 5.1:-2943528 | None:intergenic |
| GGAAAGTACTGCTCCACAAG+AGG | 0.628857 | 5.1:-2943582 | None:intergenic |
| AATATTGAGAGCTTCGCGAG+TGG | 0.632829 | 5.1:-2940616 | None:intergenic |
| CAGTAGTGACGATGATGAGG+AGG | 0.634098 | 5.1:+2942063 | MS.gene21951:CDS |
| GGAAACTCAAAATCCACAGA+AGG | 0.636552 | 5.1:+2943608 | MS.gene21951:CDS |
| GATGGAAATAATTGATGCTG+TGG | 0.636669 | 5.1:+2944001 | MS.gene21951:CDS |
| CTCATGTTATGCTTCAAAGG+AGG | 0.639066 | 5.1:+2943539 | MS.gene21951:CDS |
| AATAGAGAAGATACGTTGTG+AGG | 0.642594 | 5.1:-2940428 | None:intergenic |
| GCAAGTGCCAGAAGGAAGTG+AGG | 0.646484 | 5.1:+2942099 | MS.gene21951:CDS |
| CGACTAGGAAACATATGTCG+AGG | 0.650767 | 5.1:+2943411 | MS.gene21951:CDS |
| GGTTCGTATCCATTACACCC+TGG | 0.700142 | 5.1:+2940546 | MS.gene21951:CDS |
| TGAATCGGGTTGTAATGGTG+TGG | 0.717428 | 5.1:+2943310 | MS.gene21951:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATTTTTTTTTAATAATTTC+TGG | + | chr5.1:2942517-2942536 | MS.gene21951:intron | 10.0% |
| !!! | TATATTTATCATTTTTTTCT+CGG | + | chr5.1:2943065-2943084 | MS.gene21951:intron | 10.0% |
| !!! | TTTTTTATTTAAAGGTTTAT+CGG | - | chr5.1:2942017-2942036 | None:intergenic | 10.0% |
| !! | AAAAAAATCATATGATATGT+TGG | - | chr5.1:2942506-2942525 | None:intergenic | 15.0% |
| !! | AAAAAATAATCTAATACATG+CGG | - | chr5.1:2943657-2943676 | None:intergenic | 15.0% |
| !! | AATTGATTATGGTTAAAATT+GGG | + | chr5.1:2940809-2940828 | MS.gene21951:intron | 15.0% |
| !! | AATTTATATGTTTATTGAGA+AGG | + | chr5.1:2941127-2941146 | MS.gene21951:intron | 15.0% |
| !! | ATATAATCTTGAATATGATA+TGG | - | chr5.1:2942677-2942696 | None:intergenic | 15.0% |
| !! | CAATAAACATATAAATTATG+AGG | - | chr5.1:2941124-2941143 | None:intergenic | 15.0% |
| !!! | AACGTGATTTTTTTATTTAA+AGG | - | chr5.1:2942025-2942044 | None:intergenic | 15.0% |
| !!! | AATTAAAAGAGATTCTTTTA+GGG | + | chr5.1:2941244-2941263 | MS.gene21951:intron | 15.0% |
| !!! | CACTTTTCATTTTTAAATTA+CGG | - | chr5.1:2941440-2941459 | None:intergenic | 15.0% |
| !!! | TAAATTTGATTTAACATGTT+TGG | - | chr5.1:2940991-2941010 | None:intergenic | 15.0% |
| !!! | TAATTAAAAGAGATTCTTTT+AGG | + | chr5.1:2941243-2941262 | MS.gene21951:intron | 15.0% |
| !!! | TACTTTTCTTTTTTGAATTA+CGG | + | chr5.1:2941311-2941330 | MS.gene21951:intron | 15.0% |
| !!! | TATATCTCTATAATCAATTT+TGG | + | chr5.1:2941009-2941028 | MS.gene21951:intron | 15.0% |
| !!! | TGTATAATTTTTTATCAGTT+TGG | + | chr5.1:2944630-2944649 | MS.gene21951:intron | 15.0% |
| !!! | TTTAAAGTTAGAATCAATTA+CGG | + | chr5.1:2940937-2940956 | MS.gene21951:intron | 15.0% |
| !! | AAAAAAAAAATCATGGAAAG+CGG | - | chr5.1:2940682-2940701 | None:intergenic | 20.0% |
| !! | AAGGAATAAAGAGATATATA+CGG | - | chr5.1:2942789-2942808 | None:intergenic | 20.0% |
| !! | ACTAACAATAGAAACAATAA+AGG | - | chr5.1:2941888-2941907 | None:intergenic | 20.0% |
| !! | ATAATTTCACACAAAACATT+GGG | - | chr5.1:2944288-2944307 | None:intergenic | 20.0% |
| !! | ATCTTCAATTAACTTATCAA+TGG | - | chr5.1:2942389-2942408 | None:intergenic | 20.0% |
| !! | CAAGAAAAAACTTCAAAAAA+TGG | - | chr5.1:2944183-2944202 | None:intergenic | 20.0% |
| !! | CAATACAGTATATTCAATAT+AGG | + | chr5.1:2942598-2942617 | MS.gene21951:intron | 20.0% |
| !! | CACTTGTATAAATTGATAAA+TGG | - | chr5.1:2941833-2941852 | None:intergenic | 20.0% |
| !! | GAATAGAATAATATACAGAA+TGG | - | chr5.1:2942459-2942478 | None:intergenic | 20.0% |
| !! | GAATTGATTATGGTTAAAAT+TGG | + | chr5.1:2940808-2940827 | MS.gene21951:intron | 20.0% |
| !! | TCTAACTTTAAACTACAAAT+TGG | - | chr5.1:2940929-2940948 | None:intergenic | 20.0% |
| !! | TTTAATTATGAAATCCCTAT+TGG | + | chr5.1:2944332-2944351 | MS.gene21951:intron | 20.0% |
| !! | TTTATCAATTTATACAAGTG+AGG | + | chr5.1:2941833-2941852 | MS.gene21951:intron | 20.0% |
| !! | TTTGAATCTTATTAAAGTCA+AGG | - | chr5.1:2941793-2941812 | None:intergenic | 20.0% |
| !!! | GATTTTGAATGAATTGATTA+TGG | + | chr5.1:2940798-2940817 | MS.gene21951:intron | 20.0% |
| ! | AAAAAAGCGATACACATTAA+TGG | - | chr5.1:2941862-2941881 | None:intergenic | 25.0% |
| ! | AAAAAGCGATACACATTAAT+GGG | - | chr5.1:2941861-2941880 | None:intergenic | 25.0% |
| ! | AAACTACACATACAAAATAC+TGG | - | chr5.1:2943940-2943959 | None:intergenic | 25.0% |
| ! | AAAGGATACTTATACTTCAA+GGG | + | chr5.1:2942961-2942980 | MS.gene21951:intron | 25.0% |
| ! | AAAGTAAACTGAGTTATGTT+TGG | + | chr5.1:2940835-2940854 | MS.gene21951:intron | 25.0% |
| ! | AAATAGGTTTCTTTCCAATA+GGG | - | chr5.1:2944349-2944368 | None:intergenic | 25.0% |
| ! | AAGATTGAAATTGAAAGAAG+AGG | - | chr5.1:2940462-2940481 | None:intergenic | 25.0% |
| ! | AGTGACAACAAATTATCTAA+TGG | - | chr5.1:2943810-2943829 | None:intergenic | 25.0% |
| ! | ATAATCTAGCATAGAAAACA+AGG | - | chr5.1:2942808-2942827 | None:intergenic | 25.0% |
| ! | ATCCTTTATGCATACTTTAT+GGG | - | chr5.1:2941585-2941604 | None:intergenic | 25.0% |
| ! | CATAATTTCACACAAAACAT+TGG | - | chr5.1:2944289-2944308 | None:intergenic | 25.0% |
| ! | CATTGAAACATAAGAAAACA+AGG | - | chr5.1:2942760-2942779 | None:intergenic | 25.0% |
| ! | GTTTATCATATTCTCTTTGA+TGG | + | chr5.1:2941525-2941544 | MS.gene21951:intron | 25.0% |
| ! | TAAAGGATACTTATACTTCA+AGG | + | chr5.1:2942960-2942979 | MS.gene21951:intron | 25.0% |
| ! | TAGTTCAATAAGTGTATGTT+TGG | - | chr5.1:2941052-2941071 | None:intergenic | 25.0% |
| !! | TGTGAAATTATGCATTTTCA+TGG | + | chr5.1:2944297-2944316 | MS.gene21951:intron | 25.0% |
| !! | TTGAAATTTTGAATACACTG+TGG | + | chr5.1:2941622-2941641 | MS.gene21951:intron | 25.0% |
| !! | TTTCCTTTTCATTTGTGAAT+AGG | + | chr5.1:2943221-2943240 | MS.gene21951:intron | 25.0% |
| !!! | CTTTGTTGATTTCTTAGTAA+AGG | + | chr5.1:2942943-2942962 | MS.gene21951:intron | 25.0% |
| !!! | GTTCATGATGCTTTATTTAT+AGG | + | chr5.1:2941087-2941106 | MS.gene21951:intron | 25.0% |
| !!! | TCAACTATTATGGTTTTATC+AGG | - | chr5.1:2944068-2944087 | None:intergenic | 25.0% |
| !!! | TCTCAAATATTTGCTTTTGA+TGG | + | chr5.1:2943008-2943027 | MS.gene21951:intron | 25.0% |
| !!! | TGTTTTGTTATACCATCTTT+CGG | + | chr5.1:2944553-2944572 | MS.gene21951:intron | 25.0% |
| !!! | TTCTATTCTGTTTCTGTTAA+AGG | + | chr5.1:2942471-2942490 | MS.gene21951:intron | 25.0% |
| AAACTTCGCTAATTCACTAA+GGG | - | chr5.1:2941509-2941528 | None:intergenic | 30.0% | |
| AAAGTTAGAATCAATTACGG+AGG | + | chr5.1:2940940-2940959 | MS.gene21951:intron | 30.0% | |
| AACAACATTTGTGTCTTGTA+AGG | - | chr5.1:2943863-2943882 | None:intergenic | 30.0% | |
| ACACCTATTCACAAATGAAA+AGG | - | chr5.1:2943227-2943246 | None:intergenic | 30.0% | |
| ACTGTGTTAGCAATTTAAGT+TGG | - | chr5.1:2944473-2944492 | None:intergenic | 30.0% | |
| AGAAGTTGAGTTTGACTAAT+AGG | + | chr5.1:2941182-2941201 | MS.gene21951:intron | 30.0% | |
| AGTTGTCCAAGTACAATATT+AGG | + | chr5.1:2944722-2944741 | MS.gene21951:CDS | 30.0% | |
| ATCCCATAAAGTATGCATAA+AGG | + | chr5.1:2941580-2941599 | MS.gene21951:intron | 30.0% | |
| ATGGTATAACAAAACAAGTC+AGG | - | chr5.1:2944549-2944568 | None:intergenic | 30.0% | |
| CAAATAGGTTTCTTTCCAAT+AGG | - | chr5.1:2944350-2944369 | None:intergenic | 30.0% | |
| CATAATAGTTGAAATTGCCA+GGG | + | chr5.1:2944076-2944095 | MS.gene21951:CDS | 30.0% | |
| CATCCTTTATGCATACTTTA+TGG | - | chr5.1:2941586-2941605 | None:intergenic | 30.0% | |
| CTGGTTTCTGCAAAAATTAA+AGG | - | chr5.1:2940518-2940537 | None:intergenic | 30.0% | |
| CTTAAATTGCTAACACAGTT+AGG | + | chr5.1:2944474-2944493 | MS.gene21951:intron | 30.0% | |
| GAAATGTGAAACAAATCCTT+AGG | - | chr5.1:2943205-2943224 | None:intergenic | 30.0% | |
| GTGTAGTTTAAGTGTTAGTT+TGG | + | chr5.1:2941684-2941703 | MS.gene21951:intron | 30.0% | |
| GTGTGGTATTTATTCAAATG+CGG | + | chr5.1:2943327-2943346 | MS.gene21951:CDS | 30.0% | |
| TAAACTTCGCTAATTCACTA+AGG | - | chr5.1:2941510-2941529 | None:intergenic | 30.0% | |
| TAACTGCCTAATATTGTACT+TGG | - | chr5.1:2944731-2944750 | None:intergenic | 30.0% | |
| TGAAAGGAATGGAAATAATC+TGG | - | chr5.1:2944211-2944230 | None:intergenic | 30.0% | |
| TGCTTTAGCAAAAAACTTAG+AGG | + | chr5.1:2941158-2941177 | MS.gene21951:intron | 30.0% | |
| TGGTATAACAAAACAAGTCA+GGG | - | chr5.1:2944548-2944567 | None:intergenic | 30.0% | |
| TTCCATTCCTTTCAAATCAA+CGG | + | chr5.1:2944217-2944236 | MS.gene21951:intron | 30.0% | |
| TTTGTTAATTAAGTAGTGGC+AGG | + | chr5.1:2943033-2943052 | MS.gene21951:intron | 30.0% | |
| ! | AGAACGATTTTGAACTCTAA+AGG | - | chr5.1:2942909-2942928 | None:intergenic | 30.0% |
| ! | CATACTATATTTTCCATCTC+AGG | - | chr5.1:2942870-2942889 | None:intergenic | 30.0% |
| ! | GGCTTTTGTTAATTAAGTAG+TGG | + | chr5.1:2943029-2943048 | MS.gene21951:intron | 30.0% |
| ! | TAATTCGTTTTACTACAGTG+AGG | + | chr5.1:2940769-2940788 | MS.gene21951:intron | 30.0% |
| ! | TGATTTGGGTGAAAAAAAAG+TGG | + | chr5.1:2942354-2942373 | MS.gene21951:CDS | 30.0% |
| ! | TTTTACGAAGAGCTAATTGA+TGG | + | chr5.1:2941965-2941984 | MS.gene21951:CDS | 30.0% |
| !!! | CTCGGAAGATTTTGATTTTT+GGG | + | chr5.1:2943083-2943102 | MS.gene21951:intron | 30.0% |
| !!! | CTTCAGCATTTTAGTTTATG+TGG | - | chr5.1:2944500-2944519 | None:intergenic | 30.0% |
| !!! | TCTCGGAAGATTTTGATTTT+TGG | + | chr5.1:2943082-2943101 | MS.gene21951:intron | 30.0% |
| AAAGAAGGACAAGTGAAAGA+AGG | - | chr5.1:2942841-2942860 | None:intergenic | 35.0% | |
| AAGGCTACTAGTGATGATAA+AGG | + | chr5.1:2942244-2942263 | MS.gene21951:CDS | 35.0% | |
| AAGTTATACTCCAATGCACA+AGG | - | chr5.1:2943159-2943178 | None:intergenic | 35.0% | |
| AATAGAGAAGATACGTTGTG+AGG | - | chr5.1:2940431-2940450 | None:intergenic | 35.0% | |
| AATGCCGTGATATCAATTTG+CGG | - | chr5.1:2941926-2941945 | None:intergenic | 35.0% | |
| ACAAGTGAAAGAAGGAAACA+TGG | - | chr5.1:2942833-2942852 | None:intergenic | 35.0% | |
| AGTCTCATGTTATGCTTCAA+AGG | + | chr5.1:2943536-2943555 | MS.gene21951:CDS | 35.0% | |
| ATGAAAAAACCTTGAACACC+AGG | - | chr5.1:2940567-2940586 | None:intergenic | 35.0% | |
| ATTAACTTAAAGAGAGTGGG+TGG | + | chr5.1:2941708-2941727 | MS.gene21951:intron | 35.0% | |
| ATTCAAATGCGGAAGAAAGA+TGG | + | chr5.1:2943338-2943357 | MS.gene21951:CDS | 35.0% | |
| ATTTCACACAAAACATTGGG+TGG | - | chr5.1:2944285-2944304 | None:intergenic | 35.0% | |
| CCATAATAGTTGAAATTGCC+AGG | + | chr5.1:2944075-2944094 | MS.gene21951:CDS | 35.0% | |
| CCTGGCAATTTCAACTATTA+TGG | - | chr5.1:2944078-2944097 | None:intergenic | 35.0% | |
| CTATTGGAAACATCCAGTTT+AGG | - | chr5.1:2942142-2942161 | None:intergenic | 35.0% | |
| GAAAGCGGTTATAAGAGAAA+AGG | - | chr5.1:2940667-2940686 | None:intergenic | 35.0% | |
| GAAGAAACTTCTGTTAAGGA+AGG | + | chr5.1:2941547-2941566 | MS.gene21951:intron | 35.0% | |
| GATGGAAATAATTGATGCTG+TGG | + | chr5.1:2944001-2944020 | MS.gene21951:CDS | 35.0% | |
| GATGGAAGAAACTTCTGTTA+AGG | + | chr5.1:2941543-2941562 | MS.gene21951:intron | 35.0% | |
| GGCATTAACTTAAAGAGAGT+GGG | + | chr5.1:2941705-2941724 | MS.gene21951:intron | 35.0% | |
| GTGCATTGGAGTATAACTTT+GGG | + | chr5.1:2943160-2943179 | MS.gene21951:intron | 35.0% | |
| TAACATGTTTGGTTGTTCAC+AGG | - | chr5.1:2940980-2940999 | None:intergenic | 35.0% | |
| TACTTCATCTACTCTTGCTT+TGG | + | chr5.1:2944385-2944404 | MS.gene21951:intron | 35.0% | |
| TCAGATCCTCCTAAAATTGA+TGG | + | chr5.1:2942199-2942218 | MS.gene21951:CDS | 35.0% | |
| TGAAAAAACCTTGAACACCA+GGG | - | chr5.1:2940566-2940585 | None:intergenic | 35.0% | |
| TGAAATTGAAAGAAGAGGTG+AGG | - | chr5.1:2940457-2940476 | None:intergenic | 35.0% | |
| TGCATTGGAGTATAACTTTG+GGG | + | chr5.1:2943161-2943180 | MS.gene21951:intron | 35.0% | |
| TGGCATTAACTTAAAGAGAG+TGG | + | chr5.1:2941704-2941723 | MS.gene21951:intron | 35.0% | |
| TGTGCATTGGAGTATAACTT+TGG | + | chr5.1:2943159-2943178 | MS.gene21951:intron | 35.0% | |
| TTACTGAGGTCAACTTTATG+AGG | - | chr5.1:2944044-2944063 | None:intergenic | 35.0% | |
| TTCAAAAAATGGCTGCTACT+CGG | - | chr5.1:2944172-2944191 | None:intergenic | 35.0% | |
| TTGCAGAAACCAGTGAAAAA+GGG | + | chr5.1:2940525-2940544 | MS.gene21951:intron | 35.0% | |
| TTTCACCTGTTTCATTGTCA+TGG | - | chr5.1:2942177-2942196 | None:intergenic | 35.0% | |
| TTTGCAGAAACCAGTGAAAA+AGG | + | chr5.1:2940524-2940543 | MS.gene21951:intron | 35.0% | |
| ! | ACTAATGCATGCTGTTTGTT+TGG | + | chr5.1:2944659-2944678 | MS.gene21951:intron | 35.0% |
| ! | CTCATCAGCTATCTTTTCTA+TGG | - | chr5.1:2942290-2942309 | None:intergenic | 35.0% |
| ! | GCATGCAAACCATCAATTTT+AGG | - | chr5.1:2942211-2942230 | None:intergenic | 35.0% |
| ! | GCTATCTTTTCTATGGTCTT+AGG | - | chr5.1:2942283-2942302 | None:intergenic | 35.0% |
| ! | GCTTTGCTCAAACTTTTATG+TGG | + | chr5.1:2942539-2942558 | MS.gene21951:intron | 35.0% |
| ! | TAATTCACTAAGGGTGTGTT+TGG | - | chr5.1:2941500-2941519 | None:intergenic | 35.0% |
| ! | TGCAAACCATCAATTTTAGG+AGG | - | chr5.1:2942208-2942227 | None:intergenic | 35.0% |
| ! | TGTATGTTTGGTTCCACTTT+GGG | - | chr5.1:2941040-2941059 | None:intergenic | 35.0% |
| ! | TTTTCACCCAAATCACTTGT+TGG | - | chr5.1:2942349-2942368 | None:intergenic | 35.0% |
| !! | GTAATAGCCGTTGATTTGAA+AGG | - | chr5.1:2944227-2944246 | None:intergenic | 35.0% |
| !!! | AGATTCTTTTAGGGTGTGTT+TGG | + | chr5.1:2941253-2941272 | MS.gene21951:intron | 35.0% |
| !!! | TGGTTTTATCAGGATTACTG+AGG | - | chr5.1:2944058-2944077 | None:intergenic | 35.0% |
| !!! | TTTTAGGGTGTGTTTGGATT+GGG | + | chr5.1:2941259-2941278 | MS.gene21951:intron | 35.0% |
| AAATGCGCCAACAAGTGATT+TGG | + | chr5.1:2942339-2942358 | MS.gene21951:CDS | 40.0% | |
| AAATTCAGCCTTTCTTACCC+TGG | - | chr5.1:2944096-2944115 | None:intergenic | 40.0% | |
| AAGAAACGCTGATACATTGC+TGG | + | chr5.1:2943476-2943495 | MS.gene21951:intron | 40.0% | |
| AATGCGCCAACAAGTGATTT+GGG | + | chr5.1:2942340-2942359 | MS.gene21951:CDS | 40.0% | |
| ACATTGGGTGGATGATTTAG+CGG | - | chr5.1:2944273-2944292 | None:intergenic | 40.0% | |
| ACTAGCCATGACAATGAAAC+AGG | + | chr5.1:2942169-2942188 | MS.gene21951:CDS | 40.0% | |
| AGAACTGAGAGACAAGAGTA+AGG | + | chr5.1:2942417-2942436 | MS.gene21951:CDS | 40.0% | |
| ATACACTGTGGATCTGCTTA+TGG | + | chr5.1:2941634-2941653 | MS.gene21951:intron | 40.0% | |
| ATGCACAGTATTACCTTCTG+TGG | - | chr5.1:2943624-2943643 | None:intergenic | 40.0% | |
| ATGCCGTGATATCAATTTGC+GGG | - | chr5.1:2941925-2941944 | None:intergenic | 40.0% | |
| ATGGCTAGTATTGTCGCTAT+TGG | - | chr5.1:2942158-2942177 | None:intergenic | 40.0% | |
| ATTACAACCCGATTCAAGCT+TGG | - | chr5.1:2943306-2943325 | None:intergenic | 40.0% | |
| CATCTCAGGAGTCATAAAGA+AGG | - | chr5.1:2942856-2942875 | None:intergenic | 40.0% | |
| CTCATGTTATGCTTCAAAGG+AGG | + | chr5.1:2943539-2943558 | MS.gene21951:CDS | 40.0% | |
| CTTCTTTATGACTCCTGAGA+TGG | + | chr5.1:2942854-2942873 | MS.gene21951:intron | 40.0% | |
| GACTTCTTGCTTCTCTTCAA+TGG | + | chr5.1:2944421-2944440 | MS.gene21951:intron | 40.0% | |
| GCACAAGGAACTGAAGAATT+AGG | - | chr5.1:2943144-2943163 | None:intergenic | 40.0% | |
| GCATAACATGAGACTTCGAT+AGG | - | chr5.1:2943531-2943550 | None:intergenic | 40.0% | |
| GGAAACTCAAAATCCACAGA+AGG | + | chr5.1:2943608-2943627 | MS.gene21951:CDS | 40.0% | |
| GTGTGTAAACTTTGTGCGAT+AGG | - | chr5.1:2943682-2943701 | None:intergenic | 40.0% | |
| TCAAAAAATGGCTGCTACTC+GGG | - | chr5.1:2944171-2944190 | None:intergenic | 40.0% | |
| TGAAATTGCCAGGGTAAGAA+AGG | + | chr5.1:2944085-2944104 | MS.gene21951:intron | 40.0% | |
| TGTCCCGCAAATTGATATCA+CGG | + | chr5.1:2941919-2941938 | MS.gene21951:intron | 40.0% | |
| TGTGAAACAAATCCTTAGGC+AGG | - | chr5.1:2943201-2943220 | None:intergenic | 40.0% | |
| TTCTTCAGTTCCTTGTGCAT+TGG | + | chr5.1:2943146-2943165 | MS.gene21951:intron | 40.0% | |
| ! | AAGCTTGAATCGGGTTGTAA+TGG | + | chr5.1:2943305-2943324 | MS.gene21951:CDS | 40.0% |
| ! | AATTGATGGTTTGCATGCTC+AGG | + | chr5.1:2942213-2942232 | MS.gene21951:CDS | 40.0% |
| ! | ATACATTGCTGGCTACTTCT+AGG | + | chr5.1:2943487-2943506 | MS.gene21951:intron | 40.0% |
| ! | CGATAGTAAAGCTACTTTCC+AGG | - | chr5.1:2943741-2943760 | None:intergenic | 40.0% |
| ! | GTGTATGTTTGGTTCCACTT+TGG | - | chr5.1:2941041-2941060 | None:intergenic | 40.0% |
| ! | TAGGTGTGTGTTTTGCTAAG+AGG | + | chr5.1:2943240-2943259 | MS.gene21951:intron | 40.0% |
| ! | TTTAGGGTGTGTTTGGATTG+GGG | + | chr5.1:2941260-2941279 | MS.gene21951:intron | 40.0% |
| ! | TTTTTCATCACTTGCGATGG+TGG | + | chr5.1:2940579-2940598 | MS.gene21951:CDS | 40.0% |
| !! | AAATACTGGTGTTGACAGGA+TGG | + | chr5.1:2943983-2944002 | MS.gene21951:CDS | 40.0% |
| !! | AGCCGTTGATTTGAAAGGAA+TGG | - | chr5.1:2944222-2944241 | None:intergenic | 40.0% |
| !!! | CTGTGGATTTTGAGTTTCCA+CGG | - | chr5.1:2943607-2943626 | None:intergenic | 40.0% |
| !!! | CTTTTAGGGTGTGTTTGGAT+TGG | + | chr5.1:2941258-2941277 | MS.gene21951:intron | 40.0% |
| !!! | GGTTTTTTCATCACTTGCGA+TGG | + | chr5.1:2940576-2940595 | MS.gene21951:CDS | 40.0% |
| !!! | TGTGGATTTTGAGTTTCCAC+GGG | - | chr5.1:2943606-2943625 | None:intergenic | 40.0% |
| AAAAGCAATCCAGCCTCTTG+TGG | + | chr5.1:2943569-2943588 | MS.gene21951:CDS | 45.0% | |
| AAAGATAGCTGATGAGCCAC+CGG | + | chr5.1:2942294-2942313 | MS.gene21951:CDS | 45.0% | |
| AATATTGAGAGCTTCGCGAG+TGG | - | chr5.1:2940619-2940638 | None:intergenic | 45.0% | |
| ACGCTTTGCCAAGCTTGAAT+CGG | + | chr5.1:2943295-2943314 | MS.gene21951:CDS | 45.0% | |
| AGAAGGAAGTGAGGAAAAGG+AGG | + | chr5.1:2942108-2942127 | MS.gene21951:CDS | 45.0% | |
| AGGTCAACTTTATGAGGTGC+AGG | - | chr5.1:2944038-2944057 | None:intergenic | 45.0% | |
| ATCCGGTTAACGATCTCGTT+GGG | - | chr5.1:2943374-2943393 | None:intergenic | 45.0% | |
| ATGCTGCTGATGTCACTATC+CGG | - | chr5.1:2943391-2943410 | None:intergenic | 45.0% | |
| ATTGGGTGGATGATTTAGCG+GGG | - | chr5.1:2944271-2944290 | None:intergenic | 45.0% | |
| CATTGGGTGGATGATTTAGC+GGG | - | chr5.1:2944272-2944291 | None:intergenic | 45.0% | |
| CGACTAGGAAACATATGTCG+AGG | + | chr5.1:2943411-2943430 | MS.gene21951:CDS | 45.0% | |
| CGGGAAATACATGGCATGAT+GGG | - | chr5.1:2944152-2944171 | None:intergenic | 45.0% | |
| CTTATCCCACTAAGTGCAGT+CGG | - | chr5.1:2942643-2942662 | None:intergenic | 45.0% | |
| GAGCATTTCTCACCGAAAGA+TGG | - | chr5.1:2944568-2944587 | None:intergenic | 45.0% | |
| GGAGGACAAAAAGCCTAAAC+TGG | + | chr5.1:2942126-2942145 | MS.gene21951:CDS | 45.0% | |
| TATCCGGTTAACGATCTCGT+TGG | - | chr5.1:2943375-2943394 | None:intergenic | 45.0% | |
| TCATCTACTCTTGCTTTGGC+TGG | + | chr5.1:2944389-2944408 | MS.gene21951:intron | 45.0% | |
| TCGGACAACTTTGTCACACT+TGG | - | chr5.1:2941998-2942017 | None:intergenic | 45.0% | |
| TCGGGAAATACATGGCATGA+TGG | - | chr5.1:2944153-2944172 | None:intergenic | 45.0% | |
| TGGCAGACTGTTTGCTTGAT+CGG | + | chr5.1:2944679-2944698 | MS.gene21951:intron | 45.0% | |
| TGTCAACACCAGTATTTGCC+CGG | - | chr5.1:2943980-2943999 | None:intergenic | 45.0% | |
| TGTGTTTGGATGGAGGGTTT+AGG | - | chr5.1:2941486-2941505 | None:intergenic | 45.0% | |
| TTCCAGTAGTGACGATGATG+AGG | + | chr5.1:2942060-2942079 | MS.gene21951:CDS | 45.0% | |
| TTGCTGTGATGTATGAAGCC+CGG | + | chr5.1:2943958-2943977 | MS.gene21951:CDS | 45.0% | |
| TTTGGATGGAGGGTTTAGGA+GGG | - | chr5.1:2941482-2941501 | None:intergenic | 45.0% | |
| ! | ATGTTTGGTTCCACTTTGGG+AGG | - | chr5.1:2941037-2941056 | None:intergenic | 45.0% |
| ! | GCGTTTTCTCTTCTTTCCAC+CGG | - | chr5.1:2940402-2940421 | None:intergenic | 45.0% |
| ! | TAAGGGTGTGTTTGGATGGA+GGG | - | chr5.1:2941492-2941511 | None:intergenic | 45.0% |
| ! | TCACTAAGGGTGTGTTTGGA+TGG | - | chr5.1:2941496-2941515 | None:intergenic | 45.0% |
| ! | TCCTTTTCCTCACTTCCTTC+TGG | - | chr5.1:2942109-2942128 | None:intergenic | 45.0% |
| ! | TGAATCGGGTTGTAATGGTG+TGG | + | chr5.1:2943310-2943329 | MS.gene21951:CDS | 45.0% |
| ! | TGTGTTTGGATTGGGGGTTT+AGG | + | chr5.1:2941267-2941286 | MS.gene21951:intron | 45.0% |
| ! | TTAGGGTGTGTTTGGATTGG+GGG | + | chr5.1:2941261-2941280 | MS.gene21951:intron | 45.0% |
| ! | TTTGGATTGGGGGTTTAGGA+GGG | + | chr5.1:2941271-2941290 | MS.gene21951:intron | 45.0% |
| ! | TTTTCTCTTCTTTCCACCGG+CGG | - | chr5.1:2940399-2940418 | None:intergenic | 45.0% |
| !! | AATTTTGGCACCTCCCAAAG+TGG | + | chr5.1:2941024-2941043 | MS.gene21951:intron | 45.0% |
| !! | AGTATAACTTTGGGGCACTG+GGG | + | chr5.1:2943169-2943188 | MS.gene21951:intron | 45.0% |
| !! | GAGTATAACTTTGGGGCACT+GGG | + | chr5.1:2943168-2943187 | MS.gene21951:intron | 45.0% |
| !! | GGATACGAACCCTTTTTCAC+TGG | - | chr5.1:2940537-2940556 | None:intergenic | 45.0% |
| !! | AAAAATAAAAAAAAAAATCA+TGG | - | chr5.1:2940689-2940708 | None:intergenic | 5.0% |
| ACTAAGTGCAGTCGGCTACA+TGG | - | chr5.1:2942635-2942654 | None:intergenic | 50.0% | |
| ATGTAGCCGACTGCACTTAG+TGG | + | chr5.1:2942634-2942653 | MS.gene21951:intron | 50.0% | |
| CAGTAGTGACGATGATGAGG+AGG | + | chr5.1:2942063-2942082 | MS.gene21951:CDS | 50.0% | |
| CCATTACACCCTGGTGTTCA+AGG | + | chr5.1:2940555-2940574 | MS.gene21951:CDS | 50.0% | |
| CCTTGAACACCAGGGTGTAA+TGG | - | chr5.1:2940558-2940577 | None:intergenic | 50.0% | |
| CGACTGCACTTAGTGGGATA+AGG | + | chr5.1:2942641-2942660 | MS.gene21951:intron | 50.0% | |
| CGCTTTGCCAAGCTTGAATC+GGG | + | chr5.1:2943296-2943315 | MS.gene21951:CDS | 50.0% | |
| CTCCTCATCATCGTCACTAC+TGG | - | chr5.1:2942065-2942084 | None:intergenic | 50.0% | |
| GCAAAGCATGAGAGCAATCC+TGG | + | chr5.1:2943720-2943739 | MS.gene21951:intron | 50.0% | |
| GCACTTAGTGGGATAAGGCT+TGG | + | chr5.1:2942646-2942665 | MS.gene21951:intron | 50.0% | |
| GCAGACTGTTTGCTTGATCG+GGG | + | chr5.1:2944681-2944700 | MS.gene21951:intron | 50.0% | |
| GCCAGAAGGAAGTGAGGAAA+AGG | + | chr5.1:2942105-2942124 | MS.gene21951:CDS | 50.0% | |
| GCTGCTACTCGGGAAATACA+TGG | - | chr5.1:2944161-2944180 | None:intergenic | 50.0% | |
| GGCAGACTGTTTGCTTGATC+GGG | + | chr5.1:2944680-2944699 | MS.gene21951:intron | 50.0% | |
| GGTTCGTATCCATTACACCC+TGG | + | chr5.1:2940546-2940565 | MS.gene21951:CDS | 50.0% | |
| GTCAACACCAGTATTTGCCC+GGG | - | chr5.1:2943979-2943998 | None:intergenic | 50.0% | |
| GTTTGGATGGAGGGTTTAGG+AGG | - | chr5.1:2941483-2941502 | None:intergenic | 50.0% | |
| TATGAAGCCCGGGCAAATAC+TGG | + | chr5.1:2943969-2943988 | MS.gene21951:CDS | 50.0% | |
| TCCGGTTAACGATCTCGTTG+GGG | - | chr5.1:2943373-2943392 | None:intergenic | 50.0% | |
| TGACGATGATGAGGAGGAAG+AGG | + | chr5.1:2942069-2942088 | MS.gene21951:CDS | 50.0% | |
| TGATGAGGAGGAAGAGGAGA+AGG | + | chr5.1:2942075-2942094 | MS.gene21951:CDS | 50.0% | |
| TGCTGTGATGTATGAAGCCC+GGG | + | chr5.1:2943959-2943978 | MS.gene21951:CDS | 50.0% | |
| TGTAGCCGACTGCACTTAGT+GGG | + | chr5.1:2942635-2942654 | MS.gene21951:intron | 50.0% | |
| TTGCAGCACTCTTTCACAGC+CGG | - | chr5.1:2942316-2942335 | None:intergenic | 50.0% | |
| TTGGATGGAGGGTTTAGGAG+GGG | - | chr5.1:2941481-2941500 | None:intergenic | 50.0% | |
| TTGGGTGGATGATTTAGCGG+GGG | - | chr5.1:2944270-2944289 | None:intergenic | 50.0% | |
| ! | ATGGTTTGCATGCTCAGGCT+GGG | + | chr5.1:2942218-2942237 | MS.gene21951:CDS | 50.0% |
| ! | CGGGGTCATTGAGAAGTACA+AGG | + | chr5.1:2944699-2944718 | MS.gene21951:CDS | 50.0% |
| ! | CTAAGGGTGTGTTTGGATGG+AGG | - | chr5.1:2941493-2941512 | None:intergenic | 50.0% |
| ! | GTTTGGATTGGGGGTTTAGG+AGG | + | chr5.1:2941270-2941289 | MS.gene21951:intron | 50.0% |
| ! | TTGGATTGGGGGTTTAGGAG+GGG | + | chr5.1:2941272-2941291 | MS.gene21951:intron | 50.0% |
| !! | GGAAAGTACTGCTCCACAAG+AGG | - | chr5.1:2943585-2943604 | None:intergenic | 50.0% |
| !! | GGAGTATAACTTTGGGGCAC+TGG | + | chr5.1:2943167-2943186 | MS.gene21951:intron | 50.0% |
| !! | GGGCAAATACTGGTGTTGAC+AGG | + | chr5.1:2943979-2943998 | MS.gene21951:CDS | 50.0% |
| !! | TGACATCAGCAGCATCGACT+AGG | + | chr5.1:2943396-2943415 | MS.gene21951:CDS | 50.0% |
| AGTACTGCTCCACAAGAGGC+TGG | - | chr5.1:2943581-2943600 | None:intergenic | 55.0% | |
| ATGGAGGGTTTAGGAGGGGA+AGG | - | chr5.1:2941477-2941496 | None:intergenic | 55.0% | |
| GCAAGTGCCAGAAGGAAGTG+AGG | + | chr5.1:2942099-2942118 | MS.gene21951:CDS | 55.0% | |
| GCCCCAACGAGATCGTTAAC+CGG | + | chr5.1:2943369-2943388 | MS.gene21951:CDS | 55.0% | |
| TGGAGGGTTTAGGAGGGGAA+GGG | - | chr5.1:2941476-2941495 | None:intergenic | 55.0% | |
| TGTGGAGCAGTACTTTCCCG+TGG | + | chr5.1:2943587-2943606 | MS.gene21951:CDS | 55.0% | |
| ! | GATGGTTTGCATGCTCAGGC+TGG | + | chr5.1:2942217-2942236 | MS.gene21951:CDS | 55.0% |
| ! | TGGTTTGCATGCTCAGGCTG+GGG | + | chr5.1:2942219-2942238 | MS.gene21951:CDS | 55.0% |
| AGGGTTTAGGAGGGGAAGGG+AGG | - | chr5.1:2941473-2941492 | None:intergenic | 60.0% | |
| CAGCACTCTTTCACAGCCGG+TGG | - | chr5.1:2942313-2942332 | None:intergenic | 60.0% | |
| GCATGCTCAGGCTGGGGATA+AGG | + | chr5.1:2942225-2942244 | MS.gene21951:CDS | 60.0% | |
| GGGTTTAGGAGGGGAAGCGA+GGG | + | chr5.1:2941281-2941300 | MS.gene21951:intron | 60.0% | |
| GGGTTTAGGAGGGGAAGGGA+GGG | - | chr5.1:2941472-2941491 | None:intergenic | 60.0% | |
| GGTTTAGGAGGGGAAGCGAG+GGG | + | chr5.1:2941282-2941301 | MS.gene21951:intron | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+GGG | - | chr5.1:2941471-2941490 | None:intergenic | 60.0% | |
| TCTCTTCTTTCCACCGGCGG+CGG | - | chr5.1:2940396-2940415 | None:intergenic | 60.0% | |
| ! | GAGAAGGCGCAAGTGCCAGA+AGG | + | chr5.1:2942091-2942110 | MS.gene21951:CDS | 60.0% |
| GGGGTTTAGGAGGGGAAGCG+AGG | + | chr5.1:2941280-2941299 | MS.gene21951:intron | 65.0% | |
| TAGGAGGGGAAGCGAGGGGA+GGG | + | chr5.1:2941286-2941305 | MS.gene21951:intron | 65.0% | |
| TTAGGAGGGGAAGCGAGGGG+AGG | + | chr5.1:2941285-2941304 | MS.gene21951:intron | 65.0% | |
| !! | ACTTTGGGGCACTGGGGCTG+AGG | + | chr5.1:2943175-2943194 | MS.gene21951:intron | 65.0% |
| ACCGGCGGCGGCAGCAGTAT+CGG | - | chr5.1:2940384-2940403 | None:intergenic | 70.0% | |
| AGGAGGGGAAGGGAGGGGAG+AGG | - | chr5.1:2941466-2941485 | None:intergenic | 70.0% | |
| CTGGGGCTGAGGCCTGCCTA+AGG | + | chr5.1:2943186-2943205 | MS.gene21951:intron | 70.0% | |
| GGAGGGGAAGGGAGGGGAGA+GGG | - | chr5.1:2941465-2941484 | None:intergenic | 70.0% | |
| CCCGATACTGCTGCCGCCGC+CGG | + | chr5.1:2940380-2940399 | MS.gene21951:CDS | 75.0% | |
| CCGGCGGCGGCAGCAGTATC+GGG | - | chr5.1:2940383-2940402 | None:intergenic | 75.0% | |
| GATACTGCTGCCGCCGCCGG+TGG | + | chr5.1:2940383-2940402 | MS.gene21951:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 2940374 | 2944768 | 2940374 | ID=MS.gene21951 |
| chr5.1 | mRNA | 2940374 | 2944768 | 2940374 | ID=MS.gene21951.t1;Parent=MS.gene21951 |
| chr5.1 | exon | 2940374 | 2940436 | 2940374 | ID=MS.gene21951.t1.exon1;Parent=MS.gene21951.t1 |
| chr5.1 | CDS | 2940374 | 2940436 | 2940374 | ID=cds.MS.gene21951.t1;Parent=MS.gene21951.t1 |
| chr5.1 | exon | 2940531 | 2940647 | 2940531 | ID=MS.gene21951.t1.exon2;Parent=MS.gene21951.t1 |
| chr5.1 | CDS | 2940531 | 2940647 | 2940531 | ID=cds.MS.gene21951.t1;Parent=MS.gene21951.t1 |
| chr5.1 | exon | 2941965 | 2942438 | 2941965 | ID=MS.gene21951.t1.exon3;Parent=MS.gene21951.t1 |
| chr5.1 | CDS | 2941965 | 2942438 | 2941965 | ID=cds.MS.gene21951.t1;Parent=MS.gene21951.t1 |
| chr5.1 | exon | 2943293 | 2943432 | 2943293 | ID=MS.gene21951.t1.exon4;Parent=MS.gene21951.t1 |
| chr5.1 | CDS | 2943293 | 2943432 | 2943293 | ID=cds.MS.gene21951.t1;Parent=MS.gene21951.t1 |
| chr5.1 | exon | 2943509 | 2943629 | 2943509 | ID=MS.gene21951.t1.exon5;Parent=MS.gene21951.t1 |
| chr5.1 | CDS | 2943509 | 2943629 | 2943509 | ID=cds.MS.gene21951.t1;Parent=MS.gene21951.t1 |
| chr5.1 | exon | 2943957 | 2944097 | 2943957 | ID=MS.gene21951.t1.exon6;Parent=MS.gene21951.t1 |
| chr5.1 | CDS | 2943957 | 2944097 | 2943957 | ID=cds.MS.gene21951.t1;Parent=MS.gene21951.t1 |
| chr5.1 | exon | 2944685 | 2944768 | 2944685 | ID=MS.gene21951.t1.exon7;Parent=MS.gene21951.t1 |
| chr5.1 | CDS | 2944685 | 2944768 | 2944685 | ID=cds.MS.gene21951.t1;Parent=MS.gene21951.t1 |
| Gene Sequence |
| Protein sequence |
