Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22289.t1 | XP_003610966.1 | 96 | 378 | 15 | 0 | 1 | 378 | 1 | 378 | 1.70E-182 | 648.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22289.t1 | Q99J36 | 32.5 | 197 | 123 | 4 | 183 | 376 | 81 | 270 | 4.9e-21 | 103.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22289.t1 | G7K999 | 96.0 | 378 | 15 | 0 | 1 | 378 | 1 | 378 | 1.2e-182 | 648.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22289.t1 | MTR_5g009010 | 96.825 | 378 | 12 | 0 | 1 | 378 | 1 | 378 | 0.0 | 746 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22289.t1 | AT5G12410 | 55.438 | 377 | 146 | 6 | 12 | 376 | 9 | 375 | 1.68e-134 | 389 |
Find 85 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGGCAATTTCAACTATTA+TGG | 0.192469 | 5.3:-3085781 | None:intergenic |
| TTTGCAGAAACCAGTGAAAA+AGG | 0.213652 | 5.3:+3082229 | MS.gene22289:intron |
| CGCTTTGCCAAGCTTGAATC+AGG | 0.273895 | 5.3:+3085002 | MS.gene22289:CDS |
| CTCCTCATCATCGTCATTAC+TGG | 0.276874 | 5.3:-3083764 | None:intergenic |
| GGCAGACTGTTTGCTTGATC+GGG | 0.303852 | 5.3:+3086384 | MS.gene22289:intron |
| AAATGCGCCAACAAGTGATT+TGG | 0.316855 | 5.3:+3084038 | MS.gene22289:CDS |
| CCCGATACTGCTGCCGCCGC+CGG | 0.331092 | 5.3:+3082085 | MS.gene22289:CDS |
| ACCGGCGGCGGCAGCAGTAT+CGG | 0.364568 | 5.3:-3082086 | None:intergenic |
| ATCCGGTTAACGATCTCGTT+GGG | 0.365210 | 5.3:-3085077 | None:intergenic |
| TCAGATCCTCCTAAAATTGA+TGG | 0.374582 | 5.3:+3083901 | MS.gene22289:CDS |
| CCATTACACCCTGGTGTTCA+AGG | 0.375474 | 5.3:+3082260 | MS.gene22289:CDS |
| CCGGCGGCGGCAGCAGTATC+GGG | 0.387466 | 5.3:-3082085 | None:intergenic |
| GCATGCTCAGGCTGGGGATA+AGG | 0.395820 | 5.3:+3083927 | MS.gene22289:CDS |
| ATCTTCAATTAACTTATCAA+TGG | 0.396744 | 5.3:-3084085 | None:intergenic |
| ATGGCTAGTATTGTCGCTAT+TGG | 0.397862 | 5.3:-3083857 | None:intergenic |
| CTATTGGAAACATCCAGTTT+AGG | 0.400292 | 5.3:-3083841 | None:intergenic |
| TATGAAGCCCGGGCAAATAC+TGG | 0.408924 | 5.3:+3085675 | MS.gene22289:CDS |
| TGGCAGACTGTTTGCTTGAT+CGG | 0.410558 | 5.3:+3086383 | MS.gene22289:intron |
| TTTCACCTGTTTCATTGTCA+TGG | 0.428481 | 5.3:-3083876 | None:intergenic |
| GATGGTCTGCATGCTCAGGC+TGG | 0.432322 | 5.3:+3083919 | MS.gene22289:CDS |
| AGTTGTCCAAGTACAATATT+AGG | 0.433079 | 5.3:+3086426 | MS.gene22289:CDS |
| CCTTGAACACCAGGGTGTAA+TGG | 0.434065 | 5.3:-3082260 | None:intergenic |
| ATGGTCTGCATGCTCAGGCT+GGG | 0.437149 | 5.3:+3083920 | MS.gene22289:CDS |
| AATGCGCCAACAAGTGATTT+GGG | 0.444791 | 5.3:+3084039 | MS.gene22289:CDS |
| CCATAATAGTTGAAATTGCC+AGG | 0.445233 | 5.3:+3085781 | MS.gene22289:CDS |
| TGACGATGATGAGGAGGAAG+AGG | 0.450741 | 5.3:+3083771 | MS.gene22289:CDS |
| TCGGACAACTTTGTTACACT+TGG | 0.458784 | 5.3:-3083697 | None:intergenic |
| ACTAGCCATGACAATGAAAC+AGG | 0.461113 | 5.3:+3083871 | MS.gene22289:CDS |
| GCCAGAAGGAAGTGAGGAAA+AGG | 0.476120 | 5.3:+3083807 | MS.gene22289:CDS |
| ATTCAAATGCGGAAGAAAGA+TGG | 0.476734 | 5.3:+3085044 | MS.gene22289:CDS |
| TTACTGAGGTCAACTTTATG+AGG | 0.482532 | 5.3:-3085747 | None:intergenic |
| GATAAGGCTAGGGATGATAA+AGG | 0.490760 | 5.3:+3083943 | MS.gene22289:CDS |
| TAACTGCCTAATATTGTACT+TGG | 0.498069 | 5.3:-3086432 | None:intergenic |
| GCCCCAACGAGATCGTTAAC+CGG | 0.500331 | 5.3:+3085075 | MS.gene22289:CDS |
| CTCAGGCTGGGGATAAGGCT+AGG | 0.500358 | 5.3:+3083932 | MS.gene22289:CDS |
| AAAAGCAATCCAGCCTCTTG+TGG | 0.500551 | 5.3:+3085275 | MS.gene22289:CDS |
| AGTACTGCTCCACAAGAGGC+TGG | 0.501229 | 5.3:-3085284 | None:intergenic |
| AGGTCAACTTTATGAGGTGC+AGG | 0.509742 | 5.3:-3085741 | None:intergenic |
| TGTCAACACCAGTATTTGCC+CGG | 0.510087 | 5.3:-3085683 | None:intergenic |
| GATACTGCTGCCGCCGCCGG+TGG | 0.511273 | 5.3:+3082088 | MS.gene22289:CDS |
| AATTGATGGTCTGCATGCTC+AGG | 0.515159 | 5.3:+3083915 | MS.gene22289:CDS |
| TTGCAGCACTCTTTCACAGC+CGG | 0.524969 | 5.3:-3084012 | None:intergenic |
| TGGTCTGCATGCTCAGGCTG+GGG | 0.531350 | 5.3:+3083921 | MS.gene22289:CDS |
| ATGCTGCTGATGTCACTATC+CGG | 0.531589 | 5.3:-3085094 | None:intergenic |
| AGAACTGAGAGACAAGAGTA+AGG | 0.536916 | 5.3:+3084116 | MS.gene22289:CDS |
| GGGCAAATACTGGTGTTGAC+AGG | 0.537044 | 5.3:+3085685 | MS.gene22289:CDS |
| TATCCGGTTAACGATCTCGT+TGG | 0.539404 | 5.3:-3085078 | None:intergenic |
| TGAGGAGGAAGAGGAGAAGG+CGG | 0.542897 | 5.3:+3083780 | MS.gene22289:CDS |
| AAAGGCTCATGCTTTACTTG+AGG | 0.548357 | 5.3:-3086456 | None:intergenic |
| TGCTGTGATGTATGAAGCCC+GGG | 0.549023 | 5.3:+3085665 | MS.gene22289:CDS |
| TGTGGATTATGAGTTTCCAC+AGG | 0.553471 | 5.3:-3085309 | None:intergenic |
| TGATGAGGAGGAAGAGGAGA+AGG | 0.556136 | 5.3:+3083777 | MS.gene22289:CDS |
| ATTACAACCTGATTCAAGCT+TGG | 0.559965 | 5.3:-3085009 | None:intergenic |
| TTGCTGTGATGTATGAAGCC+CGG | 0.561353 | 5.3:+3085664 | MS.gene22289:CDS |
| CAGCACTCTTTCACAGCCGG+TGG | 0.561979 | 5.3:-3084009 | None:intergenic |
| CGGGGTCATTGAGAAGTACA+AGG | 0.563046 | 5.3:+3086403 | MS.gene22289:CDS |
| AGTCTCATGTTATGCTTCAA+AGG | 0.565719 | 5.3:+3085242 | MS.gene22289:CDS |
| ATGCACAGTATTACCTTCTG+TGG | 0.570175 | 5.3:-3085327 | None:intergenic |
| GTCAACACCAGTATTTGCCC+GGG | 0.570407 | 5.3:-3085682 | None:intergenic |
| TGACATCAGCAGCATCGACT+AGG | 0.577556 | 5.3:+3085102 | MS.gene22289:CDS |
| TCCGGTTAACGATCTCGTTG+GGG | 0.579623 | 5.3:-3085076 | None:intergenic |
| AAGCTTGAATCAGGTTGTAA+TGG | 0.585307 | 5.3:+3085011 | MS.gene22289:CDS |
| GCAGACTGTTTGCTTGATCG+GGG | 0.589916 | 5.3:+3086385 | MS.gene22289:intron |
| TCAGGCTGGGGATAAGGCTA+GGG | 0.592868 | 5.3:+3083933 | MS.gene22289:CDS |
| AAAGATAGCTGATGAGCCAC+CGG | 0.594350 | 5.3:+3083993 | MS.gene22289:CDS |
| TCTCTTCTTTCCACCGGCGG+CGG | 0.600339 | 5.3:-3082098 | None:intergenic |
| GTGTGGTATTTATTCAAATG+CGG | 0.602556 | 5.3:+3085033 | MS.gene22289:CDS |
| AAATACTGGTGTTGACAGGA+TGG | 0.603355 | 5.3:+3085689 | MS.gene22289:CDS |
| AGAAGGAAGTGAGGAAAAGG+AGG | 0.606127 | 5.3:+3083810 | MS.gene22289:CDS |
| TGTGGAGCAGTACTTTCCTG+TGG | 0.612032 | 5.3:+3085293 | MS.gene22289:CDS |
| CATAATAGTTGAAATTGCCA+GGG | 0.614211 | 5.3:+3085782 | MS.gene22289:CDS |
| GAGAAGGCGGAAGTGCCAGA+AGG | 0.614551 | 5.3:+3083793 | MS.gene22289:CDS |
| GCATAACATGAGACTTCGAT+AGG | 0.618502 | 5.3:-3085234 | None:intergenic |
| CAGTAATGACGATGATGAGG+AGG | 0.623466 | 5.3:+3083765 | MS.gene22289:CDS |
| GGAAAGTACTGCTCCACAAG+AGG | 0.628857 | 5.3:-3085288 | None:intergenic |
| TTCCAGTAATGACGATGATG+AGG | 0.630409 | 5.3:+3083762 | MS.gene22289:CDS |
| GGAAACTCATAATCCACAGA+AGG | 0.632688 | 5.3:+3085314 | MS.gene22289:CDS |
| AATATTGAGAGCTTCGCGAG+TGG | 0.632829 | 5.3:-3082321 | None:intergenic |
| GATGGAAATAATTGATGCTG+TGG | 0.636669 | 5.3:+3085707 | MS.gene22289:CDS |
| CTCATGTTATGCTTCAAAGG+AGG | 0.639066 | 5.3:+3085245 | MS.gene22289:CDS |
| AATAGAGAAGATACGTTGTG+AGG | 0.642594 | 5.3:-3082133 | None:intergenic |
| GGAAGTGCCAGAAGGAAGTG+AGG | 0.646484 | 5.3:+3083801 | MS.gene22289:CDS |
| CGACTAGGAAACATATGTCG+AGG | 0.650767 | 5.3:+3085117 | MS.gene22289:CDS |
| TGAATCAGGTTGTAATGGTG+TGG | 0.685447 | 5.3:+3085016 | MS.gene22289:CDS |
| GGTTCGTATCCATTACACCC+TGG | 0.700142 | 5.3:+3082251 | MS.gene22289:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAACATATATAAATTATG+AGG | - | chr5.3:3082826-3082845 | None:intergenic | 10.0% |
| !! | TCATAATTTATATATGTTTA+TGG | + | chr5.3:3082825-3082844 | MS.gene22289:intron | 10.0% |
| !!! | AATTAAAAAAGATTCTTTTA+GGG | + | chr5.3:3082948-3082967 | MS.gene22289:intron | 10.0% |
| !!! | GATTTTTTTTTAATAATTTC+TGG | + | chr5.3:3084216-3084235 | MS.gene22289:intron | 10.0% |
| !!! | TAATTAAAAAAGATTCTTTT+AGG | + | chr5.3:3082947-3082966 | MS.gene22289:intron | 10.0% |
| !!! | TATATTTATCATTTTTTTCT+TGG | + | chr5.3:3084771-3084790 | MS.gene22289:intron | 10.0% |
| !!! | TTTTTTATTTAAAGGTTTAT+CGG | - | chr5.3:3083719-3083738 | None:intergenic | 10.0% |
| !! | AATTGATTATGGTTAAAATT+GGG | + | chr5.3:3082511-3082530 | MS.gene22289:intron | 15.0% |
| !! | ACAAAATAAAGAGATATATA+CGG | - | chr5.3:3084497-3084516 | None:intergenic | 15.0% |
| !! | TCTAACTTTAAACTATAAAT+TGG | - | chr5.3:3082631-3082650 | None:intergenic | 15.0% |
| !!! | AACGTGATTTTTTTATTTAA+AGG | - | chr5.3:3083727-3083746 | None:intergenic | 15.0% |
| !!! | CACTTTTCATTTTTAAATTA+CGG | - | chr5.3:3083144-3083163 | None:intergenic | 15.0% |
| !!! | TAAATTTGATTTAACATGTT+TGG | - | chr5.3:3082693-3082712 | None:intergenic | 15.0% |
| !!! | TACTTTTCTTTTTTGAATTA+CGG | + | chr5.3:3083015-3083034 | MS.gene22289:intron | 15.0% |
| !!! | TATATCTCTATAATCAATTT+TGG | + | chr5.3:3082711-3082730 | MS.gene22289:intron | 15.0% |
| !!! | TGTATAATTTTTTATCAGTT+TGG | + | chr5.3:3086334-3086353 | MS.gene22289:intron | 15.0% |
| !!! | TTTAAAGTTAGAATCAATTA+CGG | + | chr5.3:3082639-3082658 | MS.gene22289:intron | 15.0% |
| !! | AAAAAAAAAATCATGGAAAG+CGG | - | chr5.3:3082387-3082406 | None:intergenic | 20.0% |
| !! | AAAAAATAATCTAATACACG+CGG | - | chr5.3:3085363-3085382 | None:intergenic | 20.0% |
| !! | ACTAACAATAGAAACAATAA+AGG | - | chr5.3:3083590-3083609 | None:intergenic | 20.0% |
| !! | ATCTTCAATTAACTTATCAA+TGG | - | chr5.3:3084088-3084107 | None:intergenic | 20.0% |
| !! | CAAGAAAAAACTTCAAAAAA+TGG | - | chr5.3:3085889-3085908 | None:intergenic | 20.0% |
| !! | CACTTGTATAAATTGATAAA+TGG | - | chr5.3:3083535-3083554 | None:intergenic | 20.0% |
| !! | GAATAGAATAATATACAGAA+TGG | - | chr5.3:3084158-3084177 | None:intergenic | 20.0% |
| !! | GAATTGATTATGGTTAAAAT+TGG | + | chr5.3:3082510-3082529 | MS.gene22289:intron | 20.0% |
| !! | TGGAAAATATAGTATGATAT+TGG | + | chr5.3:3084580-3084599 | MS.gene22289:intron | 20.0% |
| !! | TTTAATTATGAAATCCCTAT+TGG | + | chr5.3:3086036-3086055 | MS.gene22289:intron | 20.0% |
| !! | TTTATATATGTTTATGGAGA+AGG | + | chr5.3:3082831-3082850 | MS.gene22289:intron | 20.0% |
| !! | TTTATCAATTTATACAAGTG+AGG | + | chr5.3:3083535-3083554 | MS.gene22289:intron | 20.0% |
| !!! | ATCATATGATATGTTAGTTT+AGG | - | chr5.3:3084199-3084218 | None:intergenic | 20.0% |
| !!! | GATTTTGAATGAATTGATTA+TGG | + | chr5.3:3082500-3082519 | MS.gene22289:intron | 20.0% |
| ! | AAAAAAGCGATACACATTAA+TGG | - | chr5.3:3083564-3083583 | None:intergenic | 25.0% |
| ! | AAAAAGCGATACACATTAAT+GGG | - | chr5.3:3083563-3083582 | None:intergenic | 25.0% |
| ! | AAACTACACATACAAAATAC+TGG | - | chr5.3:3085646-3085665 | None:intergenic | 25.0% |
| ! | AAAGGATACTTATACTTCAA+GGG | + | chr5.3:3084667-3084686 | MS.gene22289:intron | 25.0% |
| ! | AAAGTAAACTGAGTTATGTT+TGG | + | chr5.3:3082537-3082556 | MS.gene22289:intron | 25.0% |
| ! | AAATAGGTTTCTTTCCAATA+GGG | - | chr5.3:3086053-3086072 | None:intergenic | 25.0% |
| ! | AAGATTGAAATTGAAAGAAG+AGG | - | chr5.3:3082167-3082186 | None:intergenic | 25.0% |
| ! | ACGAGAGAAACTATTAATAT+TGG | - | chr5.3:3084268-3084287 | None:intergenic | 25.0% |
| ! | AGTGACAACAAATTATCTAA+TGG | - | chr5.3:3085516-3085535 | None:intergenic | 25.0% |
| ! | ATATTCAAGATAGAACATCA+TGG | + | chr5.3:3084306-3084325 | MS.gene22289:intron | 25.0% |
| ! | ATCCTTTATGCATACTTTAT+GGG | - | chr5.3:3083287-3083306 | None:intergenic | 25.0% |
| ! | ATGGTATAATAAAACAAGTC+AGG | - | chr5.3:3086253-3086272 | None:intergenic | 25.0% |
| ! | CATTGAAACATAAGAAAACA+AGG | - | chr5.3:3084468-3084487 | None:intergenic | 25.0% |
| ! | GAAATGTGAAACAAATACTT+AGG | - | chr5.3:3084911-3084930 | None:intergenic | 25.0% |
| ! | GTTTATCATATTCTCTTTGA+TGG | + | chr5.3:3083227-3083246 | MS.gene22289:intron | 25.0% |
| ! | TAAAGGATACTTATACTTCA+AGG | + | chr5.3:3084666-3084685 | MS.gene22289:intron | 25.0% |
| ! | TAGTTCAATAAGTGTATGTT+TGG | - | chr5.3:3082754-3082773 | None:intergenic | 25.0% |
| ! | TGGTATAATAAAACAAGTCA+GGG | - | chr5.3:3086252-3086271 | None:intergenic | 25.0% |
| ! | TTTGAATCTTGTTAAAGTCA+AGG | - | chr5.3:3083495-3083514 | None:intergenic | 25.0% |
| !! | TGTGAAATTATGCATTTTCA+TGG | + | chr5.3:3086001-3086020 | MS.gene22289:intron | 25.0% |
| !! | TTGAAATTTTGAATACACTG+TGG | + | chr5.3:3083324-3083343 | MS.gene22289:intron | 25.0% |
| !! | TTTCCTTTTCATTTGTGAAT+AGG | + | chr5.3:3084927-3084946 | MS.gene22289:intron | 25.0% |
| !!! | CTTGGAAGATTTTGATTTTT+GGG | + | chr5.3:3084789-3084808 | MS.gene22289:intron | 25.0% |
| !!! | GTTCATGATGCTTTATTTAT+AGG | + | chr5.3:3082789-3082808 | MS.gene22289:intron | 25.0% |
| !!! | TCAACTATTATGGTTTTATC+AGG | - | chr5.3:3085774-3085793 | None:intergenic | 25.0% |
| !!! | TCTCAGATATTTACTTTTGA+TGG | + | chr5.3:3084714-3084733 | MS.gene22289:intron | 25.0% |
| !!! | TCTTGGAAGATTTTGATTTT+TGG | + | chr5.3:3084788-3084807 | MS.gene22289:intron | 25.0% |
| AAACTTCGCTAATTCACTAA+GGG | - | chr5.3:3083211-3083230 | None:intergenic | 30.0% | |
| AAAGTTAGAATCAATTACGG+AGG | + | chr5.3:3082642-3082661 | MS.gene22289:intron | 30.0% | |
| AACAACATTTGTGTCTTGTA+AGG | - | chr5.3:3085569-3085588 | None:intergenic | 30.0% | |
| ACACCTATTCACAAATGAAA+AGG | - | chr5.3:3084933-3084952 | None:intergenic | 30.0% | |
| ACTGTGTTAACGATTTAAGT+TGG | - | chr5.3:3086177-3086196 | None:intergenic | 30.0% | |
| AGAAGTTGAGTTTGACTAAT+AGG | + | chr5.3:3082886-3082905 | MS.gene22289:intron | 30.0% | |
| AGTTGTCCAAGTACAATATT+AGG | + | chr5.3:3086426-3086445 | MS.gene22289:CDS | 30.0% | |
| ATCCCATAAAGTATGCATAA+AGG | + | chr5.3:3083282-3083301 | MS.gene22289:intron | 30.0% | |
| CAAATAGGTTTCTTTCCAAT+AGG | - | chr5.3:3086054-3086073 | None:intergenic | 30.0% | |
| CATAATAGTTGAAATTGCCA+GGG | + | chr5.3:3085782-3085801 | MS.gene22289:CDS | 30.0% | |
| CATCCTTTATGCATACTTTA+TGG | - | chr5.3:3083288-3083307 | None:intergenic | 30.0% | |
| CTGGTTTCTGCAAAAATTAA+AGG | - | chr5.3:3082223-3082242 | None:intergenic | 30.0% | |
| CTTAAATCGTTAACACAGTT+AGG | + | chr5.3:3086178-3086197 | MS.gene22289:intron | 30.0% | |
| GCATAATTTCACACAACATT+GGG | - | chr5.3:3085994-3086013 | None:intergenic | 30.0% | |
| GGCATTAACTTAAAGATAGT+GGG | + | chr5.3:3083407-3083426 | MS.gene22289:intron | 30.0% | |
| GTGTAGTTTAAGTGTTAGTT+TGG | + | chr5.3:3083386-3083405 | MS.gene22289:intron | 30.0% | |
| GTGTGGTATTTATTCAAATG+CGG | + | chr5.3:3085033-3085052 | MS.gene22289:CDS | 30.0% | |
| TAAACTTCGCTAATTCACTA+AGG | - | chr5.3:3083212-3083231 | None:intergenic | 30.0% | |
| TAACTGCCTAATATTGTACT+TGG | - | chr5.3:3086435-3086454 | None:intergenic | 30.0% | |
| TGAAAGGAATGGAAATAATC+TGG | - | chr5.3:3085917-3085936 | None:intergenic | 30.0% | |
| TGCAAGACAAATTGAAACAA+TGG | - | chr5.3:3083646-3083665 | None:intergenic | 30.0% | |
| TGCATAATTTCACACAACAT+TGG | - | chr5.3:3085995-3086014 | None:intergenic | 30.0% | |
| TGCTTTAGCAAAAAACTTAG+AGG | + | chr5.3:3082862-3082881 | MS.gene22289:intron | 30.0% | |
| TGGCATTAACTTAAAGATAG+TGG | + | chr5.3:3083406-3083425 | MS.gene22289:intron | 30.0% | |
| ! | AGAACGATTTTGAACTCTAA+AGG | - | chr5.3:3084615-3084634 | None:intergenic | 30.0% |
| ! | CATACTATATTTTCCATCTC+AGG | - | chr5.3:3084576-3084595 | None:intergenic | 30.0% |
| ! | GGCTTTTGTTAATTAAGTAG+TGG | + | chr5.3:3084735-3084754 | MS.gene22289:intron | 30.0% |
| ! | TAATTCGTTTTACTACAGTG+AGG | + | chr5.3:3082471-3082490 | MS.gene22289:intron | 30.0% |
| ! | TGATTTGGGTGAAAAAAAAG+TGG | + | chr5.3:3084053-3084072 | MS.gene22289:CDS | 30.0% |
| ! | TTTTACGAAGAGCTAATTGA+TGG | + | chr5.3:3083667-3083686 | MS.gene22289:CDS | 30.0% |
| !! | ATTAACTTAAAGATAGTGGG+TGG | + | chr5.3:3083410-3083429 | MS.gene22289:intron | 30.0% |
| !! | CTTTGTTGACTTCTTAGTAA+AGG | + | chr5.3:3084649-3084668 | MS.gene22289:intron | 30.0% |
| !! | GTAATAGCAGTTGATTTGAA+AGG | - | chr5.3:3085933-3085952 | None:intergenic | 30.0% |
| !!! | CTTCAGCATTTTAGTTTATG+TGG | - | chr5.3:3086204-3086223 | None:intergenic | 30.0% |
| AAAGAAGGACAAGTGAAAGA+AGG | - | chr5.3:3084547-3084566 | None:intergenic | 35.0% | |
| AACTTCTTGCTTCTCTTCAA+TGG | + | chr5.3:3086125-3086144 | MS.gene22289:intron | 35.0% | |
| AAGTTATACTCCAATGCACA+AGG | - | chr5.3:3084865-3084884 | None:intergenic | 35.0% | |
| AATAGAGAAGATACGTTGTG+AGG | - | chr5.3:3082136-3082155 | None:intergenic | 35.0% | |
| AATTAAGTAGTGGCAGAATC+AGG | + | chr5.3:3084745-3084764 | MS.gene22289:intron | 35.0% | |
| ACAAGTGAAAGAAGGAAACA+TGG | - | chr5.3:3084539-3084558 | None:intergenic | 35.0% | |
| AGTCTCATGTTATGCTTCAA+AGG | + | chr5.3:3085242-3085261 | MS.gene22289:CDS | 35.0% | |
| ATGAAAAAACCTTGAACACC+AGG | - | chr5.3:3082272-3082291 | None:intergenic | 35.0% | |
| ATTACAACCTGATTCAAGCT+TGG | - | chr5.3:3085012-3085031 | None:intergenic | 35.0% | |
| ATTCAAATGCGGAAGAAAGA+TGG | + | chr5.3:3085044-3085063 | MS.gene22289:CDS | 35.0% | |
| CCATAATAGTTGAAATTGCC+AGG | + | chr5.3:3085781-3085800 | MS.gene22289:CDS | 35.0% | |
| CCTGGCAATTTCAACTATTA+TGG | - | chr5.3:3085784-3085803 | None:intergenic | 35.0% | |
| CTATTGGAAACATCCAGTTT+AGG | - | chr5.3:3083844-3083863 | None:intergenic | 35.0% | |
| GAAAGCGGTTATAAGAGAAA+AGG | - | chr5.3:3082372-3082391 | None:intergenic | 35.0% | |
| GAAGAAACTTCTGTTAAGGA+AGG | + | chr5.3:3083249-3083268 | MS.gene22289:intron | 35.0% | |
| GATGGAAATAATTGATGCTG+TGG | + | chr5.3:3085707-3085726 | MS.gene22289:CDS | 35.0% | |
| GATGGAAGAAACTTCTGTTA+AGG | + | chr5.3:3083245-3083264 | MS.gene22289:intron | 35.0% | |
| GTGTGTAAACTTTGTGCAAT+AGG | - | chr5.3:3085388-3085407 | None:intergenic | 35.0% | |
| TAATTTCACACAACATTGGG+TGG | - | chr5.3:3085991-3086010 | None:intergenic | 35.0% | |
| TCAGATCCTCCTAAAATTGA+TGG | + | chr5.3:3083901-3083920 | MS.gene22289:CDS | 35.0% | |
| TGAAAAAACCTTGAACACCA+GGG | - | chr5.3:3082271-3082290 | None:intergenic | 35.0% | |
| TGAAATTGAAAGAAGAGGTG+AGG | - | chr5.3:3082162-3082181 | None:intergenic | 35.0% | |
| TGCATTGGAGTATAACTTTG+AGG | + | chr5.3:3084867-3084886 | MS.gene22289:intron | 35.0% | |
| TGTGAAACAAATACTTAGGC+AGG | - | chr5.3:3084907-3084926 | None:intergenic | 35.0% | |
| TTACTGAGGTCAACTTTATG+AGG | - | chr5.3:3085750-3085769 | None:intergenic | 35.0% | |
| TTCAAAAAATGGCTGCTACT+CGG | - | chr5.3:3085878-3085897 | None:intergenic | 35.0% | |
| TTGCAGAAACCAGTGAAAAA+GGG | + | chr5.3:3082230-3082249 | MS.gene22289:intron | 35.0% | |
| TTTCACCTGTTTCATTGTCA+TGG | - | chr5.3:3083879-3083898 | None:intergenic | 35.0% | |
| TTTGCAGAAACCAGTGAAAA+AGG | + | chr5.3:3082229-3082248 | MS.gene22289:intron | 35.0% | |
| ! | AAGCTTGAATCAGGTTGTAA+TGG | + | chr5.3:3085011-3085030 | MS.gene22289:CDS | 35.0% |
| ! | ACTAATGCATGCTGTTTGTT+TGG | + | chr5.3:3086363-3086382 | MS.gene22289:intron | 35.0% |
| ! | CTCATCAGCTATCTTTTCTA+TGG | - | chr5.3:3083989-3084008 | None:intergenic | 35.0% |
| ! | GCTATCTTTTCTATGGTCTT+AGG | - | chr5.3:3083982-3084001 | None:intergenic | 35.0% |
| ! | GCTTTGCTCAAACTTTTATG+TGG | + | chr5.3:3084238-3084257 | MS.gene22289:intron | 35.0% |
| ! | TAATTCACTAAGGGTGTGTT+TGG | - | chr5.3:3083202-3083221 | None:intergenic | 35.0% |
| ! | TGATAGTAAAGCTACTTTCC+AGG | - | chr5.3:3085447-3085466 | None:intergenic | 35.0% |
| ! | TGTATGTTTGGTTCCACTTT+GGG | - | chr5.3:3082742-3082761 | None:intergenic | 35.0% |
| ! | TTTTCACCCAAATCACTTGT+TGG | - | chr5.3:3084048-3084067 | None:intergenic | 35.0% |
| !! | AGCAGTTGATTTGAAAGGAA+TGG | - | chr5.3:3085928-3085947 | None:intergenic | 35.0% |
| !!! | AGATTCTTTTAGGGTGTGTT+TGG | + | chr5.3:3082957-3082976 | MS.gene22289:intron | 35.0% |
| !!! | TGGTTTTATCAGGATTACTG+AGG | - | chr5.3:3085764-3085783 | None:intergenic | 35.0% |
| !!! | TTTTAGGGTGTGTTTGGATT+GGG | + | chr5.3:3082963-3082982 | MS.gene22289:intron | 35.0% |
| AAATGCGCCAACAAGTGATT+TGG | + | chr5.3:3084038-3084057 | MS.gene22289:CDS | 40.0% | |
| AAATTCAGCCTTTCTTACCC+TGG | - | chr5.3:3085802-3085821 | None:intergenic | 40.0% | |
| AAGAAACGCTGATACATTGC+TGG | + | chr5.3:3085182-3085201 | MS.gene22289:intron | 40.0% | |
| AATGCGCCAACAAGTGATTT+GGG | + | chr5.3:3084039-3084058 | MS.gene22289:CDS | 40.0% | |
| ACATTGGGTGGATGATTTAG+CGG | - | chr5.3:3085979-3085998 | None:intergenic | 40.0% | |
| ACTAGCCATGACAATGAAAC+AGG | + | chr5.3:3083871-3083890 | MS.gene22289:CDS | 40.0% | |
| AGAACTGAGAGACAAGAGTA+AGG | + | chr5.3:3084116-3084135 | MS.gene22289:CDS | 40.0% | |
| ATACACTGTGGATCTGCTTA+TGG | + | chr5.3:3083336-3083355 | MS.gene22289:intron | 40.0% | |
| ATGCACAGTATTACCTTCTG+TGG | - | chr5.3:3085330-3085349 | None:intergenic | 40.0% | |
| ATGGCGTGATATCAATTTGC+AGG | - | chr5.3:3083627-3083646 | None:intergenic | 40.0% | |
| ATGGCTAGTATTGTCGCTAT+TGG | - | chr5.3:3083860-3083879 | None:intergenic | 40.0% | |
| CATCTCAGGAGTCATAAAGA+AGG | - | chr5.3:3084562-3084581 | None:intergenic | 40.0% | |
| CGGGAAATATATGGCATGAT+GGG | - | chr5.3:3085858-3085877 | None:intergenic | 40.0% | |
| CTCATGTTATGCTTCAAAGG+AGG | + | chr5.3:3085245-3085264 | MS.gene22289:CDS | 40.0% | |
| CTTCTTTATGACTCCTGAGA+TGG | + | chr5.3:3084560-3084579 | MS.gene22289:intron | 40.0% | |
| GAGCATTTCTCACAGAAAGA+TGG | - | chr5.3:3086272-3086291 | None:intergenic | 40.0% | |
| GATAAGGCTAGGGATGATAA+AGG | + | chr5.3:3083943-3083962 | MS.gene22289:CDS | 40.0% | |
| GCACAAGGAACTGAAGAATT+AGG | - | chr5.3:3084850-3084869 | None:intergenic | 40.0% | |
| GCATAACATGAGACTTCGAT+AGG | - | chr5.3:3085237-3085256 | None:intergenic | 40.0% | |
| GGAAACTCATAATCCACAGA+AGG | + | chr5.3:3085314-3085333 | MS.gene22289:CDS | 40.0% | |
| TACTGCATCTACTCTTGCTT+TGG | + | chr5.3:3086089-3086108 | MS.gene22289:intron | 40.0% | |
| TCAAAAAATGGCTGCTACTC+GGG | - | chr5.3:3085877-3085896 | None:intergenic | 40.0% | |
| TCGGACAACTTTGTTACACT+TGG | - | chr5.3:3083700-3083719 | None:intergenic | 40.0% | |
| TCGGGAAATATATGGCATGA+TGG | - | chr5.3:3085859-3085878 | None:intergenic | 40.0% | |
| TGAAATTGCCAGGGTAAGAA+AGG | + | chr5.3:3085791-3085810 | MS.gene22289:intron | 40.0% | |
| TTCCAGTAATGACGATGATG+AGG | + | chr5.3:3083762-3083781 | MS.gene22289:CDS | 40.0% | |
| TTCTTCAGTTCCTTGTGCAT+TGG | + | chr5.3:3084852-3084871 | MS.gene22289:intron | 40.0% | |
| ! | AGTAAAGCTACTTTCCAGGA+TGG | - | chr5.3:3085443-3085462 | None:intergenic | 40.0% |
| ! | ATACATTGCTGGCTACTTCT+AGG | + | chr5.3:3085193-3085212 | MS.gene22289:intron | 40.0% |
| ! | GCATGCAGACCATCAATTTT+AGG | - | chr5.3:3083913-3083932 | None:intergenic | 40.0% |
| ! | GTGTATGTTTGGTTCCACTT+TGG | - | chr5.3:3082743-3082762 | None:intergenic | 40.0% |
| ! | TAGGTGTGTGTTTTGCTAAG+AGG | + | chr5.3:3084946-3084965 | MS.gene22289:intron | 40.0% |
| ! | TGAATCAGGTTGTAATGGTG+TGG | + | chr5.3:3085016-3085035 | MS.gene22289:CDS | 40.0% |
| ! | TGCAGACCATCAATTTTAGG+AGG | - | chr5.3:3083910-3083929 | None:intergenic | 40.0% |
| ! | TGTGGATTATGAGTTTCCAC+AGG | - | chr5.3:3085312-3085331 | None:intergenic | 40.0% |
| ! | TTTAGGGTGTGTTTGGATTG+GGG | + | chr5.3:3082964-3082983 | MS.gene22289:intron | 40.0% |
| ! | TTTTTCATCACTTGCGATGG+TGG | + | chr5.3:3082284-3082303 | MS.gene22289:CDS | 40.0% |
| !! | AAATACTGGTGTTGACAGGA+TGG | + | chr5.3:3085689-3085708 | MS.gene22289:CDS | 40.0% |
| !! | AGTATAACTTTGAGGCACTG+GGG | + | chr5.3:3084875-3084894 | MS.gene22289:intron | 40.0% |
| !! | GAGTATAACTTTGAGGCACT+GGG | + | chr5.3:3084874-3084893 | MS.gene22289:intron | 40.0% |
| !!! | CTTTTAGGGTGTGTTTGGAT+TGG | + | chr5.3:3082962-3082981 | MS.gene22289:intron | 40.0% |
| !!! | GGTTTTTTCATCACTTGCGA+TGG | + | chr5.3:3082281-3082300 | MS.gene22289:CDS | 40.0% |
| AAAAGCAATCCAGCCTCTTG+TGG | + | chr5.3:3085275-3085294 | MS.gene22289:CDS | 45.0% | |
| AAAGATAGCTGATGAGCCAC+CGG | + | chr5.3:3083993-3084012 | MS.gene22289:CDS | 45.0% | |
| AATATTGAGAGCTTCGCGAG+TGG | - | chr5.3:3082324-3082343 | None:intergenic | 45.0% | |
| AGAAGGAAGTGAGGAAAAGG+AGG | + | chr5.3:3083810-3083829 | MS.gene22289:CDS | 45.0% | |
| AGGTCAACTTTATGAGGTGC+AGG | - | chr5.3:3085744-3085763 | None:intergenic | 45.0% | |
| ATCCGGTTAACGATCTCGTT+GGG | - | chr5.3:3085080-3085099 | None:intergenic | 45.0% | |
| ATGCTGCTGATGTCACTATC+CGG | - | chr5.3:3085097-3085116 | None:intergenic | 45.0% | |
| ATTGGGTGGATGATTTAGCG+GGG | - | chr5.3:3085977-3085996 | None:intergenic | 45.0% | |
| CAGTAATGACGATGATGAGG+AGG | + | chr5.3:3083765-3083784 | MS.gene22289:CDS | 45.0% | |
| CATTGGGTGGATGATTTAGC+GGG | - | chr5.3:3085978-3085997 | None:intergenic | 45.0% | |
| CGACTAGGAAACATATGTCG+AGG | + | chr5.3:3085117-3085136 | MS.gene22289:CDS | 45.0% | |
| CTCCTCATCATCGTCATTAC+TGG | - | chr5.3:3083767-3083786 | None:intergenic | 45.0% | |
| CTTATCCCACTAAGTGCAGT+CGG | - | chr5.3:3084351-3084370 | None:intergenic | 45.0% | |
| GCTGCTACTCGGGAAATATA+TGG | - | chr5.3:3085867-3085886 | None:intergenic | 45.0% | |
| GGAGGACAAAAAGCCTAAAC+TGG | + | chr5.3:3083828-3083847 | MS.gene22289:CDS | 45.0% | |
| TATCCGGTTAACGATCTCGT+TGG | - | chr5.3:3085081-3085100 | None:intergenic | 45.0% | |
| TGGCAGACTGTTTGCTTGAT+CGG | + | chr5.3:3086383-3086402 | MS.gene22289:intron | 45.0% | |
| TGTCAACACCAGTATTTGCC+CGG | - | chr5.3:3085686-3085705 | None:intergenic | 45.0% | |
| TGTGTTTGGATGGAGGGTTT+AGG | - | chr5.3:3083188-3083207 | None:intergenic | 45.0% | |
| TTGCTGTGATGTATGAAGCC+CGG | + | chr5.3:3085664-3085683 | MS.gene22289:CDS | 45.0% | |
| TTTGGATGGAGGGTTTAGGA+GGG | - | chr5.3:3083184-3083203 | None:intergenic | 45.0% | |
| ! | AATTGATGGTCTGCATGCTC+AGG | + | chr5.3:3083915-3083934 | MS.gene22289:CDS | 45.0% |
| ! | ATGTTTGGTTCCACTTTGGG+AGG | - | chr5.3:3082739-3082758 | None:intergenic | 45.0% |
| ! | GCGTTTTCTCTTCTTTCCAC+CGG | - | chr5.3:3082107-3082126 | None:intergenic | 45.0% |
| ! | TAAGGGTGTGTTTGGATGGA+GGG | - | chr5.3:3083194-3083213 | None:intergenic | 45.0% |
| ! | TCACTAAGGGTGTGTTTGGA+TGG | - | chr5.3:3083198-3083217 | None:intergenic | 45.0% |
| ! | TCCTTTTCCTCACTTCCTTC+TGG | - | chr5.3:3083811-3083830 | None:intergenic | 45.0% |
| ! | TGTGTTTGGATTGGGGGTTT+AGG | + | chr5.3:3082971-3082990 | MS.gene22289:intron | 45.0% |
| ! | TTAGGGTGTGTTTGGATTGG+GGG | + | chr5.3:3082965-3082984 | MS.gene22289:intron | 45.0% |
| ! | TTTGGATTGGGGGTTTAGGA+GGG | + | chr5.3:3082975-3082994 | MS.gene22289:intron | 45.0% |
| ! | TTTTCTCTTCTTTCCACCGG+CGG | - | chr5.3:3082104-3082123 | None:intergenic | 45.0% |
| !! | AATTTTGGCACCTCCCAAAG+TGG | + | chr5.3:3082726-3082745 | MS.gene22289:intron | 45.0% |
| !! | GGAGTATAACTTTGAGGCAC+TGG | + | chr5.3:3084873-3084892 | MS.gene22289:intron | 45.0% |
| !! | GGATACGAACCCTTTTTCAC+TGG | - | chr5.3:3082242-3082261 | None:intergenic | 45.0% |
| !! | TAAAAAAAAAAAAAAAATCA+TGG | - | chr5.3:3082394-3082413 | None:intergenic | 5.0% |
| ACTAAGTGCAGTCGGCTACA+TGG | - | chr5.3:3084343-3084362 | None:intergenic | 50.0% | |
| ATGTAGCCGACTGCACTTAG+TGG | + | chr5.3:3084342-3084361 | MS.gene22289:intron | 50.0% | |
| CCATTACACCCTGGTGTTCA+AGG | + | chr5.3:3082260-3082279 | MS.gene22289:CDS | 50.0% | |
| CCTTGAACACCAGGGTGTAA+TGG | - | chr5.3:3082263-3082282 | None:intergenic | 50.0% | |
| CGACTGCACTTAGTGGGATA+AGG | + | chr5.3:3084349-3084368 | MS.gene22289:intron | 50.0% | |
| CGCTTTGCCAAGCTTGAATC+AGG | + | chr5.3:3085002-3085021 | MS.gene22289:CDS | 50.0% | |
| GCACTTAGTGGGATAAGGCT+TGG | + | chr5.3:3084354-3084373 | MS.gene22289:intron | 50.0% | |
| GCAGACTGTTTGCTTGATCG+GGG | + | chr5.3:3086385-3086404 | MS.gene22289:intron | 50.0% | |
| GCATCTACTCTTGCTTTGGC+TGG | + | chr5.3:3086093-3086112 | MS.gene22289:intron | 50.0% | |
| GCCAGAAGGAAGTGAGGAAA+AGG | + | chr5.3:3083807-3083826 | MS.gene22289:CDS | 50.0% | |
| GGCAGACTGTTTGCTTGATC+GGG | + | chr5.3:3086384-3086403 | MS.gene22289:intron | 50.0% | |
| GGTTCGTATCCATTACACCC+TGG | + | chr5.3:3082251-3082270 | MS.gene22289:CDS | 50.0% | |
| GTCAACACCAGTATTTGCCC+GGG | - | chr5.3:3085685-3085704 | None:intergenic | 50.0% | |
| GTTTGGATGGAGGGTTTAGG+AGG | - | chr5.3:3083185-3083204 | None:intergenic | 50.0% | |
| TATGAAGCCCGGGCAAATAC+TGG | + | chr5.3:3085675-3085694 | MS.gene22289:CDS | 50.0% | |
| TCCGGTTAACGATCTCGTTG+GGG | - | chr5.3:3085079-3085098 | None:intergenic | 50.0% | |
| TGACGATGATGAGGAGGAAG+AGG | + | chr5.3:3083771-3083790 | MS.gene22289:CDS | 50.0% | |
| TGATGAGGAGGAAGAGGAGA+AGG | + | chr5.3:3083777-3083796 | MS.gene22289:CDS | 50.0% | |
| TGCTGTGATGTATGAAGCCC+GGG | + | chr5.3:3085665-3085684 | MS.gene22289:CDS | 50.0% | |
| TGTAGCCGACTGCACTTAGT+GGG | + | chr5.3:3084343-3084362 | MS.gene22289:intron | 50.0% | |
| TGTGGAGCAGTACTTTCCTG+TGG | + | chr5.3:3085293-3085312 | MS.gene22289:CDS | 50.0% | |
| TTGCAGCACTCTTTCACAGC+CGG | - | chr5.3:3084015-3084034 | None:intergenic | 50.0% | |
| TTGGATGGAGGGTTTAGGAG+GGG | - | chr5.3:3083183-3083202 | None:intergenic | 50.0% | |
| TTGGGTGGATGATTTAGCGG+GGG | - | chr5.3:3085976-3085995 | None:intergenic | 50.0% | |
| ! | CGGGGTCATTGAGAAGTACA+AGG | + | chr5.3:3086403-3086422 | MS.gene22289:CDS | 50.0% |
| ! | CTAAGGGTGTGTTTGGATGG+AGG | - | chr5.3:3083195-3083214 | None:intergenic | 50.0% |
| ! | GTTTGGATTGGGGGTTTAGG+AGG | + | chr5.3:3082974-3082993 | MS.gene22289:intron | 50.0% |
| ! | TTGGATTGGGGGTTTAGGAG+GGG | + | chr5.3:3082976-3082995 | MS.gene22289:intron | 50.0% |
| !! | GGAAAGTACTGCTCCACAAG+AGG | - | chr5.3:3085291-3085310 | None:intergenic | 50.0% |
| !! | GGGCAAATACTGGTGTTGAC+AGG | + | chr5.3:3085685-3085704 | MS.gene22289:CDS | 50.0% |
| !! | TGACATCAGCAGCATCGACT+AGG | + | chr5.3:3085102-3085121 | MS.gene22289:CDS | 50.0% |
| AGTACTGCTCCACAAGAGGC+TGG | - | chr5.3:3085287-3085306 | None:intergenic | 55.0% | |
| ATGGAGGGTTTAGGAGGGGA+AGG | - | chr5.3:3083179-3083198 | None:intergenic | 55.0% | |
| ATGGTCTGCATGCTCAGGCT+GGG | + | chr5.3:3083920-3083939 | MS.gene22289:CDS | 55.0% | |
| GCAAAGCATGAGAGCCATCC+TGG | + | chr5.3:3085426-3085445 | MS.gene22289:intron | 55.0% | |
| GCCCCAACGAGATCGTTAAC+CGG | + | chr5.3:3085075-3085094 | MS.gene22289:CDS | 55.0% | |
| TCAGGCTGGGGATAAGGCTA+GGG | + | chr5.3:3083933-3083952 | MS.gene22289:CDS | 55.0% | |
| TGAGGAGGAAGAGGAGAAGG+CGG | + | chr5.3:3083780-3083799 | MS.gene22289:CDS | 55.0% | |
| TGGAGGGTTTAGGAGGGGAA+GGG | - | chr5.3:3083178-3083197 | None:intergenic | 55.0% | |
| !! | GGAAGTGCCAGAAGGAAGTG+AGG | + | chr5.3:3083801-3083820 | MS.gene22289:CDS | 55.0% |
| CAGCACTCTTTCACAGCCGG+TGG | - | chr5.3:3084012-3084031 | None:intergenic | 60.0% | |
| CTCAGGCTGGGGATAAGGCT+AGG | + | chr5.3:3083932-3083951 | MS.gene22289:CDS | 60.0% | |
| GATGGTCTGCATGCTCAGGC+TGG | + | chr5.3:3083919-3083938 | MS.gene22289:CDS | 60.0% | |
| GCATGCTCAGGCTGGGGATA+AGG | + | chr5.3:3083927-3083946 | MS.gene22289:CDS | 60.0% | |
| GGGTTTAGGAGGGGAAGCGA+GGG | + | chr5.3:3082985-3083004 | MS.gene22289:intron | 60.0% | |
| GGTTTAGGAGGGGAAGCGAG+GGG | + | chr5.3:3082986-3083005 | MS.gene22289:intron | 60.0% | |
| GGTTTAGGAGGGGAAGGGAG+TGG | - | chr5.3:3083173-3083192 | None:intergenic | 60.0% | |
| TAGGAGGGGAAGGGAGTGGA+GGG | - | chr5.3:3083169-3083188 | None:intergenic | 60.0% | |
| TCTCTTCTTTCCACCGGCGG+CGG | - | chr5.3:3082101-3082120 | None:intergenic | 60.0% | |
| TGGTCTGCATGCTCAGGCTG+GGG | + | chr5.3:3083921-3083940 | MS.gene22289:CDS | 60.0% | |
| TTAGGAGGGGAAGGGAGTGG+AGG | - | chr5.3:3083170-3083189 | None:intergenic | 60.0% | |
| !! | ACTTTGAGGCACTGGGGCTG+AGG | + | chr5.3:3084881-3084900 | MS.gene22289:intron | 60.0% |
| !! | GAGAAGGCGGAAGTGCCAGA+AGG | + | chr5.3:3083793-3083812 | MS.gene22289:CDS | 60.0% |
| GGGGTTTAGGAGGGGAAGCG+AGG | + | chr5.3:3082984-3083003 | MS.gene22289:intron | 65.0% | |
| TAGGAGGGGAAGCGAGGGGA+GGG | + | chr5.3:3082990-3083009 | MS.gene22289:intron | 65.0% | |
| TTAGGAGGGGAAGCGAGGGG+AGG | + | chr5.3:3082989-3083008 | MS.gene22289:intron | 65.0% | |
| ACCGGCGGCGGCAGCAGTAT+CGG | - | chr5.3:3082089-3082108 | None:intergenic | 70.0% | |
| CCCGATACTGCTGCCGCCGC+CGG | + | chr5.3:3082085-3082104 | MS.gene22289:CDS | 75.0% | |
| CCGGCGGCGGCAGCAGTATC+GGG | - | chr5.3:3082088-3082107 | None:intergenic | 75.0% | |
| GATACTGCTGCCGCCGCCGG+TGG | + | chr5.3:3082088-3082107 | MS.gene22289:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 3082079 | 3086472 | 3082079 | ID=MS.gene22289 |
| chr5.3 | mRNA | 3082079 | 3086472 | 3082079 | ID=MS.gene22289.t1;Parent=MS.gene22289 |
| chr5.3 | exon | 3082079 | 3082141 | 3082079 | ID=MS.gene22289.t1.exon1;Parent=MS.gene22289.t1 |
| chr5.3 | CDS | 3082079 | 3082141 | 3082079 | ID=cds.MS.gene22289.t1;Parent=MS.gene22289.t1 |
| chr5.3 | exon | 3082236 | 3082352 | 3082236 | ID=MS.gene22289.t1.exon2;Parent=MS.gene22289.t1 |
| chr5.3 | CDS | 3082236 | 3082352 | 3082236 | ID=cds.MS.gene22289.t1;Parent=MS.gene22289.t1 |
| chr5.3 | exon | 3083667 | 3084137 | 3083667 | ID=MS.gene22289.t1.exon3;Parent=MS.gene22289.t1 |
| chr5.3 | CDS | 3083667 | 3084137 | 3083667 | ID=cds.MS.gene22289.t1;Parent=MS.gene22289.t1 |
| chr5.3 | exon | 3084999 | 3085138 | 3084999 | ID=MS.gene22289.t1.exon4;Parent=MS.gene22289.t1 |
| chr5.3 | CDS | 3084999 | 3085138 | 3084999 | ID=cds.MS.gene22289.t1;Parent=MS.gene22289.t1 |
| chr5.3 | exon | 3085215 | 3085335 | 3085215 | ID=MS.gene22289.t1.exon5;Parent=MS.gene22289.t1 |
| chr5.3 | CDS | 3085215 | 3085335 | 3085215 | ID=cds.MS.gene22289.t1;Parent=MS.gene22289.t1 |
| chr5.3 | exon | 3085663 | 3085803 | 3085663 | ID=MS.gene22289.t1.exon6;Parent=MS.gene22289.t1 |
| chr5.3 | CDS | 3085663 | 3085803 | 3085663 | ID=cds.MS.gene22289.t1;Parent=MS.gene22289.t1 |
| chr5.3 | exon | 3086389 | 3086472 | 3086389 | ID=MS.gene22289.t1.exon7;Parent=MS.gene22289.t1 |
| chr5.3 | CDS | 3086389 | 3086472 | 3086389 | ID=cds.MS.gene22289.t1;Parent=MS.gene22289.t1 |
| Gene Sequence |
| Protein sequence |
