AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene30151

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30151.t1 MTR_3g051240 97.460 433 9 1 72 502 1 433 0.0 875
MS.gene30151.t1 MTR_5g092360 79.858 422 81 2 85 502 18 439 0.0 721
MS.gene30151.t1 MTR_7g104330 58.645 428 172 4 74 497 15 441 0.0 527
MS.gene30151.t1 MTR_1g060360 60.714 420 154 4 76 485 2 420 0.0 527
MS.gene30151.t1 MTR_7g104360 60.050 403 153 6 93 489 27 427 9.76e-172 491
MS.gene30151.t1 MTR_0188s0020 42.857 427 207 12 88 479 30 454 9.80e-99 306
MS.gene30151.t1 MTR_4g115670 42.067 416 210 9 114 501 55 467 1.41e-97 303
MS.gene30151.t1 MTR_6g013050 37.072 526 222 14 63 480 3 527 2.03e-97 306
MS.gene30151.t1 MTR_4g037105 42.548 416 203 11 99 479 34 448 5.38e-95 296
MS.gene30151.t1 MTR_7g056403 37.815 476 194 9 114 489 70 543 2.31e-92 291
MS.gene30151.t1 MTR_3g083810 38.780 459 184 10 114 479 71 525 4.68e-92 291
MS.gene30151.t1 MTR_1g112630 41.452 427 212 13 89 479 26 450 2.52e-90 284
MS.gene30151.t1 MTR_3g083820 38.596 456 191 9 114 480 71 526 4.60e-90 285
MS.gene30151.t1 MTR_6g013050 36.145 498 211 13 63 454 3 499 3.52e-87 278
MS.gene30151.t1 MTR_1g052505 32.059 340 169 13 127 416 209 536 8.06e-35 138
MS.gene30151.t1 MTR_4g037670 30.267 337 176 11 127 416 231 555 2.88e-34 137
MS.gene30151.t1 MTR_4g082930 26.596 470 260 15 114 501 144 610 3.37e-27 115
MS.gene30151.t1 MTR_5g092450 61.250 80 11 1 375 454 8 67 1.80e-25 100
MS.gene30151.t1 MTR_3g074930 24.945 453 263 15 107 487 176 623 1.46e-24 107
MS.gene30151.t1 MTR_3g074930 25.349 430 249 14 125 487 192 616 4.03e-24 106
MS.gene30151.t1 MTR_4g082940 27.251 411 225 15 108 451 138 541 4.10e-24 106
MS.gene30151.t1 MTR_4g103520 25.648 347 207 9 170 468 253 596 3.28e-23 103
MS.gene30151.t1 MTR_5g045600 25.833 360 208 12 170 477 245 597 3.89e-23 103
MS.gene30151.t1 MTR_5g092300 74.138 58 15 0 431 488 9 66 4.11e-23 93.2
MS.gene30151.t1 MTR_4g103520 25.648 347 207 9 170 468 176 519 4.66e-23 102
MS.gene30151.t1 MTR_3g074970 25.620 363 187 12 170 488 198 521 8.04e-23 102
MS.gene30151.t1 MTR_8g063080 26.257 358 209 12 170 477 238 590 2.56e-22 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30151.t1 AT3G20500 73.550 431 112 1 74 502 7 437 0.0 687
MS.gene30151.t1 AT3G52820 61.440 389 147 2 97 482 30 418 2.37e-179 510
MS.gene30151.t1 AT3G52780 58.019 424 165 9 74 487 5 425 2.88e-171 489
MS.gene30151.t1 AT3G52810 58.416 404 163 3 92 491 30 432 8.29e-171 489
MS.gene30151.t1 AT3G52780 57.015 335 132 8 74 399 5 336 1.18e-128 379
MS.gene30151.t1 AT5G34850 39.729 443 231 11 69 477 4 444 1.23e-96 300
MS.gene30151.t1 AT4G36350 40.355 451 223 15 72 479 1 448 2.34e-96 300
MS.gene30151.t1 AT1G56360 40.402 448 222 14 75 479 3 448 2.05e-95 297
MS.gene30151.t1 AT3G07130 41.050 419 174 5 134 479 97 515 2.93e-93 293
MS.gene30151.t1 AT2G27190 38.544 467 239 14 72 496 7 467 2.00e-88 279
MS.gene30151.t1 AT2G16430 39.732 448 231 14 67 479 9 452 1.61e-86 274
MS.gene30151.t1 AT3G07130 37.969 453 175 6 134 480 97 549 2.19e-86 276
MS.gene30151.t1 AT4G13700 42.287 376 164 6 111 433 62 437 5.83e-85 270
MS.gene30151.t1 AT2G18130 37.838 444 227 13 65 479 6 429 5.84e-85 269
MS.gene30151.t1 AT2G16430 42.331 326 162 8 180 479 7 332 8.52e-74 237
MS.gene30151.t1 AT2G32770 36.735 392 172 6 164 479 143 534 2.22e-70 234
MS.gene30151.t1 AT4G13700 39.823 339 151 6 111 396 62 400 2.09e-66 220
MS.gene30151.t1 AT3G46120 34.537 443 190 16 65 479 6 376 8.00e-63 210
MS.gene30151.t1 AT2G32770 35.792 366 159 6 164 453 62 427 5.13e-62 209
MS.gene30151.t1 AT2G32770 32.143 392 161 7 164 479 143 505 1.46e-53 189
MS.gene30151.t1 AT1G52940 37.281 228 123 9 114 322 15 241 4.03e-32 123
MS.gene30151.t1 AT2G03450 26.490 453 246 16 114 487 143 587 4.51e-24 106
MS.gene30151.t1 AT1G13900 25.551 454 257 15 114 492 145 592 4.64e-24 106
MS.gene30151.t1 AT1G13750 26.361 349 202 11 170 468 239 582 3.06e-23 103
MS.gene30151.t1 AT5G50400 26.000 350 202 12 170 468 237 580 1.29e-22 102
MS.gene30151.t1 AT5G50400 26.000 350 202 12 170 468 165 508 1.61e-22 101
MS.gene30151.t1 AT4G24890 27.515 338 192 12 170 459 241 573 2.23e-21 98.2

Find 135 sgRNAs with CRISPR-Local

Find 457 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAGCATATACCTTTGTTAA+AGG 0.247102 3.3:-42615608 MS.gene30151:intron
CTCCATCACCGATTGTTATA+TGG 0.253892 3.3:+42613741 None:intergenic
CCGACAACAGCAAAACTAAT+TGG 0.273774 3.3:+42617413 None:intergenic
ATAACCTCCTTAGTTAATTC+AGG 0.279356 3.3:-42613397 MS.gene30151:CDS
AAGATACACCATACGGTAAT+AGG 0.321256 3.3:-42617521 MS.gene30151:CDS
ACGTGTATATAATGGAAAAT+TGG 0.322130 3.3:-42613780 MS.gene30151:CDS
TGTACTCAGAACAATATAAA+TGG 0.325340 3.3:-42615453 MS.gene30151:CDS
CCTCAGATCTGCTTTGCTCT+TGG 0.328380 3.3:-42619398 MS.gene30151:CDS
TAAACTCAACACATGCCTTC+TGG 0.336522 3.3:-42613471 MS.gene30151:CDS
TGACAGAAACGTGTATATAA+TGG 0.346137 3.3:-42613788 MS.gene30151:intron
TTTGCTGTTGTCGGAGATCT+TGG 0.346993 3.3:-42617404 MS.gene30151:CDS
TAACTCACCATGACCGAAAC+TGG 0.362111 3.3:+42613501 None:intergenic
AAAAGACACCCAGCCGTAGA+AGG 0.365470 3.3:+42619453 None:intergenic
TTTGCCTCCCCTTCTACGGC+TGG 0.366684 3.3:-42619462 MS.gene30151:CDS
CGGTAAAATCTGATGATATC+TGG 0.377504 3.3:-42613420 MS.gene30151:CDS
CGGTAAAAGTAAACAGAATT+CGG 0.386730 3.3:+42617488 None:intergenic
TACGATGTTAACCTGATTCC+TGG 0.388167 3.3:-42617332 MS.gene30151:CDS
TTGATTTGGTCCAACCAGTT+TGG 0.392374 3.3:+42617381 None:intergenic
ACCCTCTTCTTATCCTCAAC+AGG 0.393195 3.3:-42618244 MS.gene30151:intron
CCGGCTCGTCATCGTCATTC+CGG 0.395308 3.3:+42613440 None:intergenic
CTTGATCCACTTTCCTCAAA+TGG 0.396116 3.3:+42615550 None:intergenic
TAAACAGAATTCGGCTCTAA+AGG 0.397659 3.3:+42617497 None:intergenic
ACGAAAGGTCGCCAGGAATC+AGG 0.398861 3.3:+42617321 None:intergenic
AATGTGATCCAACGTTGATT+TGG 0.407456 3.3:+42617367 None:intergenic
GAGTTCCGTGAGGCCAGTTT+CGG 0.407745 3.3:-42613514 MS.gene30151:CDS
ACGGTGGTTCGTCCGGAAAA+CGG 0.408087 3.3:-42619491 MS.gene30151:CDS
TTTCTCGACGGTGGTTCGTC+CGG 0.408887 3.3:-42619498 MS.gene30151:CDS
CTGCTTTGCTCTTGGCCAAT+CGG 0.410189 3.3:-42619390 MS.gene30151:intron
CGGTGGTTCGTCCGGAAAAC+GGG 0.421842 3.3:-42619490 MS.gene30151:CDS
TCGGCATACGAAAGGTCGCC+AGG 0.422584 3.3:+42617314 None:intergenic
CTGTTACAGGAAGTGCTGAT+TGG 0.423717 3.3:-42619234 MS.gene30151:intron
GGCGGCGGCGGCGACAGGCA+TGG 0.431167 3.3:+42619536 None:intergenic
AGAATCCCATGGAAGATGTA+AGG 0.437809 3.3:+42618269 None:intergenic
CAGGAAGTGCTGATTGGTGG+TGG 0.438102 3.3:-42619228 MS.gene30151:CDS
CAGGTACACATTTCATTGGC+AGG 0.442548 3.3:-42617686 MS.gene30151:CDS
TTCCCTTGTGTTACCATCCA+TGG 0.444697 3.3:+42617230 None:intergenic
GTAGAAAATGTAACTGTAAG+AGG 0.446204 3.3:+42617553 None:intergenic
CATATACCTTTGTTAAAGGA+TGG 0.451005 3.3:-42615604 MS.gene30151:CDS
TGTCAAAGGTGGACAGGAAA+AGG 0.453174 3.3:-42614060 MS.gene30151:CDS
AAACAGAATTCGGCTCTAAA+GGG 0.453881 3.3:+42617498 None:intergenic
GTTGAATACGGAACATTGCC+AGG 0.455622 3.3:-42617608 MS.gene30151:CDS
GGTGCTCACATTATCATGCT+TGG 0.459315 3.3:-42615496 MS.gene30151:CDS
AACTCTGACCACTTCGGCTG+TGG 0.461187 3.3:+42613532 None:intergenic
ATTCCAGGTACACATTTCAT+TGG 0.465152 3.3:-42617690 MS.gene30151:intron
CGACTATATACAGCGTCGTT+GGG 0.466465 3.3:-42617294 MS.gene30151:CDS
GAGGAGCAGCAGCGACGGAC+AGG 0.471687 3.3:+42619417 None:intergenic
CGTGAGGCCAGTTTCGGTCA+TGG 0.474683 3.3:-42613508 MS.gene30151:CDS
GCACCTTCAGTTGTTGAATA+CGG 0.476817 3.3:-42617620 MS.gene30151:CDS
AGATCTAGTCGCGGCGGCGG+CGG 0.486411 3.3:+42619524 None:intergenic
GTCGGAGATCTTGGCCAAAC+TGG 0.487252 3.3:-42617395 MS.gene30151:CDS
AGGTGAAGGTGGTGATATGA+TGG 0.490466 3.3:-42613978 MS.gene30151:CDS
AACAGATCTAGTCGCGGCGG+CGG 0.492216 3.3:+42619521 None:intergenic
TTGCCTCCCCTTCTACGGCT+GGG 0.494336 3.3:-42619461 MS.gene30151:CDS
AGGGGTTGTTTAACCTGTTG+AGG 0.506972 3.3:+42618231 None:intergenic
AACACATCCTGAATTAACTA+AGG 0.508312 3.3:+42613390 None:intergenic
CCGACTATATACAGCGTCGT+TGG 0.508690 3.3:-42617295 MS.gene30151:CDS
CGGATTTGTCAAAGGTGGAC+AGG 0.509420 3.3:-42614066 MS.gene30151:CDS
CAACACATGCCTTCTGGAGT+TGG 0.510276 3.3:-42613465 MS.gene30151:CDS
ATTACATTGTCATACTTCCC+TGG 0.510389 3.3:+42617590 None:intergenic
CAGCGTCGTTGGGACACGTT+TGG 0.512295 3.3:-42617284 MS.gene30151:CDS
GATTTATATCCTATAATTCG+AGG 0.527909 3.3:-42615582 MS.gene30151:CDS
AAGTATGACAATGTAATTGA+AGG 0.528463 3.3:-42617584 MS.gene30151:CDS
GACAGGATCAGTAAAACTGT+TGG 0.532369 3.3:+42618339 None:intergenic
AAAGACACCCAGCCGTAGAA+GGG 0.534371 3.3:+42619454 None:intergenic
AGCATAAAGCAATGGCTCCA+TGG 0.538411 3.3:+42613952 None:intergenic
AAACTAATTGGAAATTGAGC+TGG 0.542505 3.3:+42617425 None:intergenic
TGGTGGGTTTGTCTCCGACT+TGG 0.544203 3.3:-42619211 MS.gene30151:CDS
AGAACAATATAAATGGCTAA+AGG 0.548688 3.3:-42615446 MS.gene30151:intron
TTGTCATATTCCATGTCCCA+TGG 0.549871 3.3:-42614024 MS.gene30151:CDS
GGTTAACATCGTATCTGCAT+TGG 0.550587 3.3:+42617342 None:intergenic
CAGCTGTTGAAGTTACTGAC+AGG 0.552437 3.3:+42618322 None:intergenic
GATCTGAGGAGCAGCAGCGA+CGG 0.554083 3.3:+42619412 None:intergenic
GGAGCTGTCCATATAACAAT+CGG 0.554832 3.3:-42613749 MS.gene30151:CDS
ATGCCTTCTGGAGTTGGCAC+CGG 0.559442 3.3:-42613459 MS.gene30151:CDS
ACCTGTTGAGGATAAGAAGA+GGG 0.559968 3.3:+42618243 None:intergenic
CATATAACAATCGGTGATGG+AGG 0.560182 3.3:-42613740 MS.gene30151:CDS
GTATATAGTCGGCATACGAA+AGG 0.560724 3.3:+42617306 None:intergenic
TTACAGGAAGTGCTGATTGG+TGG 0.561538 3.3:-42619231 MS.gene30151:intron
AGGAAGTGCTGATTGGTGGT+GGG 0.565543 3.3:-42619227 MS.gene30151:CDS
ATAAATCCATCCTTTAACAA+AGG 0.566465 3.3:+42615598 None:intergenic
TACTATTATACCATGGGACA+TGG 0.571338 3.3:+42614014 None:intergenic
GTCCATATAACAATCGGTGA+TGG 0.572920 3.3:-42613743 MS.gene30151:CDS
GAGATCTTGGCCAAACTGGT+TGG 0.574404 3.3:-42617391 MS.gene30151:CDS
GGTGATGGAGGGAACAAAGA+AGG 0.574485 3.3:-42613728 MS.gene30151:CDS
TGCTAGTTCTAGACCATGGA+TGG 0.576530 3.3:-42617243 MS.gene30151:CDS
CTGTGTTACTATTATACCAT+GGG 0.577355 3.3:+42614008 None:intergenic
CTAAAGGGCCTATTACCGTA+TGG 0.583259 3.3:+42617513 None:intergenic
GAGGTGGAAAATGCCATTTG+AGG 0.583883 3.3:-42615563 MS.gene30151:CDS
AAAATGCCATTTGAGGAAAG+TGG 0.586799 3.3:-42615556 MS.gene30151:CDS
AATAGTAACACAGCTCATCA+AGG 0.589055 3.3:-42613998 MS.gene30151:CDS
CATGACCGAAACTGGCCTCA+CGG 0.590986 3.3:+42613509 None:intergenic
GGGTTTGTCTCCGACTTGGT+TGG 0.592258 3.3:-42619207 MS.gene30151:intron
ACACCCAGCCGTAGAAGGGG+AGG 0.594029 3.3:+42619458 None:intergenic
AATGGAAAATTGGATCCTTG+TGG 0.598673 3.3:-42613770 MS.gene30151:CDS
ACAAGCATATGAGAGTTACC+TGG 0.606780 3.3:-42617661 MS.gene30151:CDS
ATTCCGGTGCCAACTCCAGA+AGG 0.606814 3.3:+42613456 None:intergenic
GAAGAGGGTTTAGAATCCCA+TGG 0.606891 3.3:+42618258 None:intergenic
ATATAGATCCACAGCCGAAG+TGG 0.607631 3.3:-42613540 MS.gene30151:CDS
CCGGAATGACGATGACGAGC+CGG 0.608032 3.3:-42613440 MS.gene30151:CDS
CAAGCATATGAGAGTTACCT+GGG 0.609551 3.3:-42617660 MS.gene30151:CDS
TGTCCACGCATATGAACGCT+CGG 0.615743 3.3:-42613900 MS.gene30151:intron
AACACAGCTCATCAAGGTGA+AGG 0.620113 3.3:-42613992 MS.gene30151:CDS
TCACGGAACTCTGACCACTT+CGG 0.622838 3.3:+42613526 None:intergenic
TGGAATATGACAAGCAACCA+AGG 0.623431 3.3:+42614034 None:intergenic
ACGCTAGCAGCATAAAGCAA+TGG 0.624653 3.3:+42613944 None:intergenic
TGGACAGGAAAAGGACACCT+TGG 0.626466 3.3:-42614051 MS.gene30151:CDS
GGATTTGTCGTCAGTAACCC+AGG 0.627462 3.3:+42617643 None:intergenic
GTCGTTGGGACACGTTTGGT+AGG 0.627696 3.3:-42617280 MS.gene30151:CDS
TCTACAGACGGATTTGTCAA+AGG 0.627930 3.3:-42614074 MS.gene30151:intron
CTAATTGGAAATTGAGCTGG+TGG 0.628378 3.3:+42617428 None:intergenic
AAGACACCCAGCCGTAGAAG+GGG 0.628540 3.3:+42619455 None:intergenic
GCTGTGTTACTATTATACCA+TGG 0.628930 3.3:+42614007 None:intergenic
GATATACGAACCAACCAAGT+CGG 0.629716 3.3:+42619197 None:intergenic
ACAGCTCATCAAGGTGAAGG+TGG 0.636860 3.3:-42613989 MS.gene30151:CDS
CCAACGACGCTGTATATAGT+CGG 0.638339 3.3:+42617295 None:intergenic
GTATTCAACAACTGAAGGTG+CGG 0.639266 3.3:+42617622 None:intergenic
ATATAACAATCGGTGATGGA+GGG 0.639292 3.3:-42613739 MS.gene30151:CDS
CTCAGGGAAGATACACCATA+CGG 0.643438 3.3:-42617528 MS.gene30151:CDS
GTTCCGTATTCAACAACTGA+AGG 0.644804 3.3:+42617617 None:intergenic
TTATATCCTATAATTCGAGG+TGG 0.646759 3.3:-42615579 MS.gene30151:CDS
CCAAGAGCAAAGCAGATCTG+AGG 0.648328 3.3:+42619398 None:intergenic
ATACCGAGCGTTCATATGCG+TGG 0.648995 3.3:+42613897 None:intergenic
TTGAATACGGAACATTGCCA+GGG 0.650238 3.3:-42617607 MS.gene30151:CDS
AACCTGTTGAGGATAAGAAG+AGG 0.651905 3.3:+42618242 None:intergenic
TGGTGATATGATGGAAACCA+TGG 0.664924 3.3:-42613969 MS.gene30151:CDS
CAGGACCTTGTCCACCACAT+CGG 0.665389 3.3:+42617468 None:intergenic
ACATCCTGAATTAACTAAGG+AGG 0.665604 3.3:+42613393 None:intergenic
ACAGACGGATTTGTCAAAGG+TGG 0.670766 3.3:-42614071 MS.gene30151:intron
CACTTGCTAGTTCTAGACCA+TGG 0.671317 3.3:-42617247 MS.gene30151:CDS
TGGTTGGACCAAATCAACGT+TGG 0.679711 3.3:-42617375 MS.gene30151:CDS
CATGGTCTAGAACTAGCAAG+TGG 0.681335 3.3:+42617248 None:intergenic
AGACCATGGATGGTAACACA+AGG 0.685999 3.3:-42617233 MS.gene30151:CDS
GTTATATGGACAGCTCCACA+AGG 0.689249 3.3:+42613755 None:intergenic
GACCATGGATGGTAACACAA+GGG 0.712669 3.3:-42617232 MS.gene30151:CDS
GAAGTGGTCAGAGTTCCGTG+AGG 0.790351 3.3:-42613524 MS.gene30151:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAAATAACTACTAATTT+TGG + chr3.3:42618736-42618755 None:intergenic 10.0%
!!! TTTTTATTTAGTTTTCTATT+TGG - chr3.3:42614220-42614239 MS.gene30151:intron 10.0%
!! AAACTAAATAAAAAAGTAAC+AGG + chr3.3:42614214-42614233 None:intergenic 15.0%
!! AAAGGGATTATAATTATAAA+CGG + chr3.3:42618770-42618789 None:intergenic 15.0%
!! TTGTTATATTCATCAAAATT+GGG - chr3.3:42616209-42616228 MS.gene30151:intron 15.0%
!!! TTAGGAATATTGTAATTTTA+GGG - chr3.3:42616167-42616186 MS.gene30151:intron 15.0%
!!! TTTAAAATAGTTGTCAATTA+TGG - chr3.3:42616896-42616915 MS.gene30151:intron 15.0%
!!! TTTAGGAATATTGTAATTTT+AGG - chr3.3:42616166-42616185 MS.gene30151:intron 15.0%
!!! TTTGTTATATTCATCAAAAT+TGG - chr3.3:42616208-42616227 MS.gene30151:intron 15.0%
!!! TTTTGTTTTATGTTTCTTTT+CGG - chr3.3:42613529-42613548 MS.gene30151:CDS 15.0%
!! AAGAACAAAACATAAAAACA+AGG + chr3.3:42616610-42616629 None:intergenic 20.0%
!! ATAAAGTAACATCCTTATAA+AGG + chr3.3:42615129-42615148 None:intergenic 20.0%
!! CAATAGAAAAATAATCAGAT+GGG + chr3.3:42618531-42618550 None:intergenic 20.0%
!! GATTAAGTAATAAAGCAAAA+GGG + chr3.3:42614720-42614739 None:intergenic 20.0%
!! TAAAGAAAATTATTGGATTC+AGG + chr3.3:42616417-42616436 None:intergenic 20.0%
!! TATTTATAACCTAAAAAGCA+CGG + chr3.3:42617782-42617801 None:intergenic 20.0%
!! TCACTTTCTCAAATTATTAT+TGG + chr3.3:42617668-42617687 None:intergenic 20.0%
!! TGAAAACTTCAAAAAACATT+TGG + chr3.3:42619204-42619223 None:intergenic 20.0%
!! TGATTAAGTAATAAAGCAAA+AGG + chr3.3:42614721-42614740 None:intergenic 20.0%
!! TTCTTTGTAAATTTACTTAC+TGG - chr3.3:42619035-42619054 MS.gene30151:intron 20.0%
!!! ATATTTTGCTTTAGTAGTTT+TGG - chr3.3:42618090-42618109 MS.gene30151:intron 20.0%
!!! ATTTTAGGGTTTTTTAGATT+TGG - chr3.3:42616181-42616200 MS.gene30151:intron 20.0%
!!! TAATTTTGCAGAAAAATATG+AGG + chr3.3:42614684-42614703 None:intergenic 20.0%
!!! TATTTTGCTTTAGTAGTTTT+GGG - chr3.3:42618091-42618110 MS.gene30151:intron 20.0%
!!! TTATTTTTGTCATGTGTTTT+TGG - chr3.3:42614774-42614793 MS.gene30151:intron 20.0%
! AAAGCAAAATATTGTTTAGC+AGG + chr3.3:42618082-42618101 None:intergenic 25.0%
! AAATATGAGGTCATAAATGA+AGG + chr3.3:42614671-42614690 None:intergenic 25.0%
! AAGCATGTTAGAAATAATAG+TGG - chr3.3:42616656-42616675 MS.gene30151:intron 25.0%
! AAGTATGACAATGTAATTGA+AGG - chr3.3:42615295-42615314 MS.gene30151:intron 25.0%
! AATATGAGGTCATAAATGAA+GGG + chr3.3:42614670-42614689 None:intergenic 25.0%
! AATCTCTTGAAAGAGATAAT+AGG - chr3.3:42616840-42616859 MS.gene30151:intron 25.0%
! ACAACAATTCAAAACATAAG+TGG + chr3.3:42614127-42614146 None:intergenic 25.0%
! AGAACAATATAAATGGCTAA+AGG - chr3.3:42617433-42617452 MS.gene30151:CDS 25.0%
! AGATCACAAAGAAGATATAA+AGG + chr3.3:42618788-42618807 None:intergenic 25.0%
! ATAAATCCATCCTTTAACAA+AGG + chr3.3:42617284-42617303 None:intergenic 25.0%
! ATACATTCATATGAAAACCT+AGG - chr3.3:42618161-42618180 MS.gene30151:intron 25.0%
! ATTAGACAGAATGAGAAAAT+TGG + chr3.3:42616576-42616595 None:intergenic 25.0%
! GAATATTATGTGTCAACAAT+TGG + chr3.3:42617885-42617904 None:intergenic 25.0%
! GATCACAAAGAAGATATAAA+GGG + chr3.3:42618787-42618806 None:intergenic 25.0%
! GATTTATATCCTATAATTCG+AGG - chr3.3:42617297-42617316 MS.gene30151:CDS 25.0%
! GCAATAGAAAAATAATCAGA+TGG + chr3.3:42618532-42618551 None:intergenic 25.0%
! GTAAAGATATGAATAGAATC+AGG - chr3.3:42618367-42618386 MS.gene30151:CDS 25.0%
! GTTATAAATAACTGTGAATG+TGG - chr3.3:42617792-42617811 MS.gene30151:intron 25.0%
! TAACAACAACAATGATCAAA+TGG + chr3.3:42616258-42616277 None:intergenic 25.0%
! TATCATTCTTACCATTTCTA+TGG - chr3.3:42619292-42619311 MS.gene30151:intron 25.0%
! TCAGTGAATATCATGTAAAT+TGG + chr3.3:42617581-42617600 None:intergenic 25.0%
! TCTAAATGTTTGTCATTCAT+TGG + chr3.3:42618212-42618231 None:intergenic 25.0%
! TCTCAAATTATTATTGGTGT+CGG + chr3.3:42617662-42617681 None:intergenic 25.0%
! TGCAAAAAAATTATTTCAGG+AGG + chr3.3:42615777-42615796 None:intergenic 25.0%
! TGTACTCAGAACAATATAAA+TGG - chr3.3:42617426-42617445 MS.gene30151:CDS 25.0%
! TTCTATTCATATCTTTACGA+AGG + chr3.3:42618365-42618384 None:intergenic 25.0%
!! ACGTGTATATAATGGAAAAT+TGG - chr3.3:42619099-42619118 MS.gene30151:intron 25.0%
!! ATGAAGAAAATGAGTTTTCT+AGG - chr3.3:42616345-42616364 MS.gene30151:intron 25.0%
!! GTTCATTTTGCAAAATCATA+TGG + chr3.3:42615755-42615774 None:intergenic 25.0%
!! TCAAAATTGGGAATTTTTGT+TGG - chr3.3:42616221-42616240 MS.gene30151:intron 25.0%
!! TTTTCATATGCTCATTGAAT+TGG + chr3.3:42614971-42614990 None:intergenic 25.0%
!! TTTTTCGTTTCTGTATTGTT+TGG - chr3.3:42613619-42613638 MS.gene30151:intron 25.0%
!!! AAAAACTCTGAAGTTATAGT+AGG - chr3.3:42618476-42618495 MS.gene30151:intron 25.0%
!!! AATAGCTTATAGCTTGTTTT+TGG - chr3.3:42614989-42615008 MS.gene30151:intron 25.0%
!!! AGAATATCATGATTTGGTTT+AGG + chr3.3:42616390-42616409 None:intergenic 25.0%
!!! CATGTCAAAAAGTTATTTCT+AGG - chr3.3:42614876-42614895 MS.gene30151:intron 25.0%
!!! GGCTTCTATTTTTATTTATG+TGG + chr3.3:42618344-42618363 None:intergenic 25.0%
!!! GTGTATTTTTTTTAAGTCCA+GGG + chr3.3:42615726-42615745 None:intergenic 25.0%
!!! GTTTGTTTCTACTAAACTTT+AGG - chr3.3:42618007-42618026 MS.gene30151:intron 25.0%
!!! TAAAATACAACTTTGAAGCT+AGG + chr3.3:42616479-42616498 None:intergenic 25.0%
!!! TATTATTCTTTTGAAGTTGC+TGG - chr3.3:42617362-42617381 MS.gene30151:CDS 25.0%
!!! TGTATTTTTTTTAAGTCCAG+GGG + chr3.3:42615725-42615744 None:intergenic 25.0%
!!! TGTTGATGTTTTGTTGTTAT+AGG - chr3.3:42617029-42617048 MS.gene30151:intron 25.0%
!!! TTTTCAATGAAAGTATGTCA+TGG - chr3.3:42617534-42617553 MS.gene30151:CDS 25.0%
!!! TTTTGTTGATTTTTCCAAAC+TGG - chr3.3:42616288-42616307 MS.gene30151:intron 25.0%
AAAAACCTTACATCTTCCAT+GGG - chr3.3:42614605-42614624 MS.gene30151:intron 30.0%
AAACATTGCCAATTCATTAG+GGG - chr3.3:42616713-42616732 MS.gene30151:intron 30.0%
AAACTAATTGGAAATTGAGC+TGG + chr3.3:42615457-42615476 None:intergenic 30.0%
AACACATCCTGAATTAACTA+AGG + chr3.3:42619492-42619511 None:intergenic 30.0%
ACTAGAAACAGTGACATTTA+TGG + chr3.3:42617919-42617938 None:intergenic 30.0%
AGAGCATATACCTTTGTTAA+AGG - chr3.3:42617271-42617290 MS.gene30151:CDS 30.0%
ATAAATGGCTAAAGGTTAGT+TGG - chr3.3:42617441-42617460 MS.gene30151:CDS 30.0%
ATAACCTCCTTAGTTAATTC+AGG - chr3.3:42619482-42619501 MS.gene30151:CDS 30.0%
ATATGAGGTCATAAATGAAG+GGG + chr3.3:42614669-42614688 None:intergenic 30.0%
ATCTTAAACGACACTTGAAA+AGG + chr3.3:42619265-42619284 None:intergenic 30.0%
ATCTTGTGGATCAATTGTTT+GGG - chr3.3:42616687-42616706 MS.gene30151:intron 30.0%
ATTAGATTGCGTAACCAAAT+GGG - chr3.3:42617160-42617179 MS.gene30151:intron 30.0%
ATTCCTAAATCACAAAACCA+CGG + chr3.3:42616155-42616174 None:intergenic 30.0%
CAAAATATTGTTTAGCAGGA+TGG + chr3.3:42618078-42618097 None:intergenic 30.0%
CATATACCTTTGTTAAAGGA+TGG - chr3.3:42617275-42617294 MS.gene30151:CDS 30.0%
CATGTAAAGCAAATAGAATG+TGG + chr3.3:42616960-42616979 None:intergenic 30.0%
CGGTAAAAGTAAACAGAATT+CGG + chr3.3:42615394-42615413 None:intergenic 30.0%
CTATAACATGAAACATCACA+AGG + chr3.3:42617979-42617998 None:intergenic 30.0%
CTTGTGATGTTTCATGTTAT+AGG - chr3.3:42617977-42617996 MS.gene30151:intron 30.0%
GAAACATTGCCAATTCATTA+GGG - chr3.3:42616712-42616731 MS.gene30151:intron 30.0%
GGGTGCAAAAAAATTATTTC+AGG + chr3.3:42615780-42615799 None:intergenic 30.0%
GGTAACAGAATATCATGATT+TGG + chr3.3:42616396-42616415 None:intergenic 30.0%
GTAGAAAATGTAACTGTAAG+AGG + chr3.3:42615329-42615348 None:intergenic 30.0%
GTTGTCAATTATGGAAACTT+TGG - chr3.3:42616905-42616924 MS.gene30151:intron 30.0%
TATTATGTGTCAACAATTGG+AGG + chr3.3:42617882-42617901 None:intergenic 30.0%
TCAAACAAGGAACCTTTATA+AGG - chr3.3:42615114-42615133 MS.gene30151:intron 30.0%
TGAAACATTGCCAATTCATT+AGG - chr3.3:42616711-42616730 MS.gene30151:intron 30.0%
TGAAGCTGTTTATTCAAACA+AGG - chr3.3:42615101-42615120 MS.gene30151:intron 30.0%
TGACAGAAACGTGTATATAA+TGG - chr3.3:42619091-42619110 MS.gene30151:intron 30.0%
TGGTTATAAACTATCAAGCA+CGG - chr3.3:42617603-42617622 MS.gene30151:CDS 30.0%
TGTTATGCTGGAAATAATGA+AGG + chr3.3:42614502-42614521 None:intergenic 30.0%
TTACATGATATTCACTGAAC+TGG - chr3.3:42617583-42617602 MS.gene30151:CDS 30.0%
TTAGCTGTATATTGCTTTCT+AGG - chr3.3:42618038-42618057 MS.gene30151:intron 30.0%
TTATATCCTATAATTCGAGG+TGG - chr3.3:42617300-42617319 MS.gene30151:CDS 30.0%
TTGCACTTCATCATTATCAA+GGG + chr3.3:42618271-42618290 None:intergenic 30.0%
TTTACTTGCTTCATTTGGAA+GGG - chr3.3:42613948-42613967 MS.gene30151:CDS 30.0%
TTTAGGAGGAGATAATCTTT+AGG + chr3.3:42616373-42616392 None:intergenic 30.0%
TTTGCACTTCATCATTATCA+AGG + chr3.3:42618272-42618291 None:intergenic 30.0%
! AATTGTTGTATCACCCATTT+TGG - chr3.3:42614138-42614157 MS.gene30151:intron 30.0%
! ATTGGTTTCAATGCAAGTAA+GGG + chr3.3:42618194-42618213 None:intergenic 30.0%
! ATTGTTGTATCACCCATTTT+GGG - chr3.3:42614139-42614158 MS.gene30151:intron 30.0%
! CAGATATCATCAGATTTTAC+CGG + chr3.3:42619461-42619480 None:intergenic 30.0%
! CTGTGTTACTATTATACCAT+GGG + chr3.3:42618874-42618893 None:intergenic 30.0%
! TATCTTGATTCTTGTTATCC+TGG - chr3.3:42613701-42613720 MS.gene30151:intron 30.0%
! TATTGTTTGGTTTCTGTTAC+AGG - chr3.3:42613632-42613651 MS.gene30151:intron 30.0%
! TTTGAGTTTCATTGTTATGC+TGG + chr3.3:42614514-42614533 None:intergenic 30.0%
! TTTTACTTGCTTCATTTGGA+AGG - chr3.3:42613947-42613966 MS.gene30151:CDS 30.0%
!! ATATCATGATTTGGTTTAGG+AGG + chr3.3:42616387-42616406 None:intergenic 30.0%
!!! CGTGTATTTTTTTTAAGTCC+AGG + chr3.3:42615727-42615746 None:intergenic 30.0%
!!! GTATTTTTTTTAAGTCCAGG+GGG + chr3.3:42615724-42615743 None:intergenic 30.0%
!!! TTTGTCATGTGTTTTTGGTT+TGG - chr3.3:42614779-42614798 MS.gene30151:intron 30.0%
!!! TTTTTTCACCTCTTGTTGTA+AGG + chr3.3:42617823-42617842 None:intergenic 30.0%
AAAAGAAACAACCACTACCA+CGG + chr3.3:42614100-42614119 None:intergenic 35.0%
AAAAGGAACAGAGGTAGTAT+CGG + chr3.3:42619248-42619267 None:intergenic 35.0%
AACCACAAAACAACCCAAAA+TGG + chr3.3:42614155-42614174 None:intergenic 35.0%
AAGATACACCATACGGTAAT+AGG - chr3.3:42615358-42615377 MS.gene30151:intron 35.0%
AATAGTAACACAGCTCATCA+AGG - chr3.3:42618881-42618900 MS.gene30151:intron 35.0%
AATGGAAAATTGGATCCTTG+TGG - chr3.3:42619109-42619128 MS.gene30151:intron 35.0%
ACATCCTGAATTAACTAAGG+AGG + chr3.3:42619489-42619508 None:intergenic 35.0%
ACCACAAAACAACCCAAAAT+GGG + chr3.3:42614154-42614173 None:intergenic 35.0%
ACTTCATCATTATCAAGGGA+AGG + chr3.3:42618267-42618286 None:intergenic 35.0%
AGTAGAAAAGAACCGTTGAA+TGG + chr3.3:42617125-42617144 None:intergenic 35.0%
ATGAAACATCACAAGGTTCA+TGG + chr3.3:42617972-42617991 None:intergenic 35.0%
ATGATGAAGTGCAAAATCCT+TGG - chr3.3:42618277-42618296 MS.gene30151:CDS 35.0%
ATTACATTGTCATACTTCCC+TGG + chr3.3:42615292-42615311 None:intergenic 35.0%
ATTCCAGGTACACATTTCAT+TGG - chr3.3:42615189-42615208 MS.gene30151:intron 35.0%
CAAAATTTAGTGAAGCTGCT+AGG - chr3.3:42614901-42614920 MS.gene30151:intron 35.0%
CAAATAGTGAAATGAACCTG+CGG + chr3.3:42615823-42615842 None:intergenic 35.0%
CATTAGATTGCGTAACCAAA+TGG - chr3.3:42617159-42617178 MS.gene30151:intron 35.0%
CGGTAAAATCTGATGATATC+TGG - chr3.3:42619459-42619478 MS.gene30151:CDS 35.0%
GAAAAACCTTACATCTTCCA+TGG - chr3.3:42614604-42614623 MS.gene30151:intron 35.0%
GATCTTGTGGATCAATTGTT+TGG - chr3.3:42616686-42616705 MS.gene30151:intron 35.0%
GGGAAAAAACTGTGTTGTAA+GGG - chr3.3:42618698-42618717 MS.gene30151:intron 35.0%
GTAATGAACAATCTCCAGTT+TGG + chr3.3:42616305-42616324 None:intergenic 35.0%
TAATCCACTTGCGTTTGATA+TGG + chr3.3:42614300-42614319 None:intergenic 35.0%
TACTATTATACCATGGGACA+TGG + chr3.3:42618868-42618887 None:intergenic 35.0%
TCTTCTTTGTGATCTACAGA+CGG - chr3.3:42618793-42618812 MS.gene30151:intron 35.0%
TCTTGAAAGAGATAATAGGC+AGG - chr3.3:42616844-42616863 MS.gene30151:intron 35.0%
TGAAACATCACAAGGTTCAT+GGG + chr3.3:42617971-42617990 None:intergenic 35.0%
TGGGAAAAAACTGTGTTGTA+AGG - chr3.3:42618697-42618716 MS.gene30151:intron 35.0%
TGGTTAAACCTTACAACAAG+AGG - chr3.3:42617812-42617831 MS.gene30151:intron 35.0%
TTAGATTGCGTAACCAAATG+GGG - chr3.3:42617161-42617180 MS.gene30151:intron 35.0%
TTCAGTGTAATCATCTGTGT+TGG - chr3.3:42617693-42617712 MS.gene30151:intron 35.0%
TTCCTCAGTAACTACGTATA+CGG + chr3.3:42618445-42618464 None:intergenic 35.0%
! AAAATGCCATTTGAGGAAAG+TGG - chr3.3:42617323-42617342 MS.gene30151:CDS 35.0%
! AATGTGATCCAACGTTGATT+TGG + chr3.3:42615515-42615534 None:intergenic 35.0%
! ACATGAAAAGTGTGTATTCC+AGG - chr3.3:42615174-42615193 MS.gene30151:intron 35.0%
! ACGAATCTTAATTTTGCCGA+CGG - chr3.3:42616025-42616044 MS.gene30151:intron 35.0%
! AGTTACATTTTCTACAGCTC+AGG - chr3.3:42615334-42615353 MS.gene30151:intron 35.0%
! CATTGAATTGGTTCTTCATC+TGG + chr3.3:42614959-42614978 None:intergenic 35.0%
! CATTTTCCACCTCGAATTAT+AGG + chr3.3:42617309-42617328 None:intergenic 35.0%
! GAAGAAGCAACAGTTATTTC+TGG + chr3.3:42618245-42618264 None:intergenic 35.0%
! GAATTTTCGTCGTCTGAATA+CGG - chr3.3:42613864-42613883 MS.gene30151:intron 35.0%
! GCTGTGTTACTATTATACCA+TGG + chr3.3:42618875-42618894 None:intergenic 35.0%
! GGAAGATGTAAGGTTTTTCT+AGG + chr3.3:42614603-42614622 None:intergenic 35.0%
! GGTGTCTTTTAGATGATTTG+TGG - chr3.3:42613439-42613458 MS.gene30151:CDS 35.0%
! GTTACATTTTCTACAGCTCA+GGG - chr3.3:42615335-42615354 MS.gene30151:intron 35.0%
! TAAACAGAATTCGGCTCTAA+AGG + chr3.3:42615385-42615404 None:intergenic 35.0%
! TAGTATCGGAGAAAACTCAA+AGG + chr3.3:42619234-42619253 None:intergenic 35.0%
!! AAACAGAATTCGGCTCTAAA+GGG + chr3.3:42615384-42615403 None:intergenic 35.0%
!! ACTAGATCTGTTTTTCTCGA+CGG - chr3.3:42613369-42613388 MS.gene30151:CDS 35.0%
!! ATATAACAATCGGTGATGGA+GGG - chr3.3:42619140-42619159 MS.gene30151:intron 35.0%
!! CATTGGTTTCAATGCAAGTA+AGG + chr3.3:42618195-42618214 None:intergenic 35.0%
!! TCTGTTTACTTTTACCGATG+TGG - chr3.3:42615397-42615416 MS.gene30151:intron 35.0%
!! TGCTAGGTTGATTTGAGAAA+TGG - chr3.3:42614917-42614936 MS.gene30151:intron 35.0%
!!! AATCCGTGGTTTTGTGATTT+AGG - chr3.3:42616149-42616168 MS.gene30151:intron 35.0%
!!! CCAATTAGTTTTGCTGTTGT+CGG - chr3.3:42615466-42615485 MS.gene30151:CDS 35.0%
!!! TAGTGGTTGTTTTGATCTTG+TGG - chr3.3:42616673-42616692 MS.gene30151:intron 35.0%
!!! TCTGCGTCTTTTTTGCAATT+CGG - chr3.3:42614042-42614061 MS.gene30151:CDS 35.0%
AACCTGTTGAGGATAAGAAG+AGG + chr3.3:42614640-42614659 None:intergenic 40.0%
AACGAAAACTACCGTCAACA+CGG + chr3.3:42613785-42613804 None:intergenic 40.0%
AACTCCATATCAAACGCAAG+TGG - chr3.3:42614293-42614312 MS.gene30151:intron 40.0%
AACTTGGATCGTTTCTGTGT+TGG - chr3.3:42613979-42613998 MS.gene30151:CDS 40.0%
AAGGATGAATGAGGTAGTAG+AGG + chr3.3:42615892-42615911 None:intergenic 40.0%
AAGTGAGAACGATAGAGAGA+AGG + chr3.3:42615849-42615868 None:intergenic 40.0%
AAGTGCAAAATCCTTGGTGA+GGG - chr3.3:42618283-42618302 MS.gene30151:CDS 40.0%
AATTCTAAACAGTCCACCGA+CGG + chr3.3:42613849-42613868 None:intergenic 40.0%
ACAAGCATATGAGAGTTACC+TGG - chr3.3:42615218-42615237 MS.gene30151:intron 40.0%
ACAAGGGAATCATGAAGTCA+GGG - chr3.3:42615663-42615682 MS.gene30151:intron 40.0%
ACCTGTTGAGGATAAGAAGA+GGG + chr3.3:42614639-42614658 None:intergenic 40.0%
AGAATCCCATGGAAGATGTA+AGG + chr3.3:42614613-42614632 None:intergenic 40.0%
AGATTCGTGTGAACATAAGC+AGG + chr3.3:42616013-42616032 None:intergenic 40.0%
ATATGCTCTACTTCATGCAG+TGG + chr3.3:42617260-42617279 None:intergenic 40.0%
ATGCACAAGTAATGAATCCG+TGG - chr3.3:42616135-42616154 MS.gene30151:intron 40.0%
ATGCCACAACAACCATTCAA+CGG - chr3.3:42617110-42617129 MS.gene30151:intron 40.0%
ATGGTTGCGTCATTGATGTT+TGG - chr3.3:42619311-42619330 MS.gene30151:intron 40.0%
ATTGCCAATTCATTAGGGGT+TGG - chr3.3:42616717-42616736 MS.gene30151:intron 40.0%
CAAGCATATGAGAGTTACCT+GGG - chr3.3:42615219-42615238 MS.gene30151:intron 40.0%
CAATGACGCAACCATAGAAA+TGG + chr3.3:42619306-42619325 None:intergenic 40.0%
CATTGCATTTGCATATGGCT+AGG - chr3.3:42618313-42618332 MS.gene30151:CDS 40.0%
CCGACAACAGCAAAACTAAT+TGG + chr3.3:42615469-42615488 None:intergenic 40.0%
CTAATTGGAAATTGAGCTGG+TGG + chr3.3:42615454-42615473 None:intergenic 40.0%
CTTGATCCACTTTCCTCAAA+TGG + chr3.3:42617332-42617351 None:intergenic 40.0%
GAAGGACAAGAATGTACTTC+AGG + chr3.3:42614484-42614503 None:intergenic 40.0%
GACAGGATCAGTAAAACTGT+TGG + chr3.3:42614543-42614562 None:intergenic 40.0%
GAGAAAAACAGATCTAGTCG+CGG + chr3.3:42613367-42613386 None:intergenic 40.0%
GATAATTCCATAAAGCAGCG+CGG + chr3.3:42618127-42618146 None:intergenic 40.0%
GATATACGAACCAACCAAGT+CGG + chr3.3:42613685-42613704 None:intergenic 40.0%
GCACCTTCAGTTGTTGAATA+CGG - chr3.3:42615259-42615278 MS.gene30151:intron 40.0%
GCATGCATTGCATTTGCATA+TGG - chr3.3:42618308-42618327 MS.gene30151:CDS 40.0%
GGAGCTGTCCATATAACAAT+CGG - chr3.3:42619130-42619149 MS.gene30151:intron 40.0%
GGTTAACATCGTATCTGCAT+TGG + chr3.3:42615540-42615559 None:intergenic 40.0%
GTATATAGTCGGCATACGAA+AGG + chr3.3:42615576-42615595 None:intergenic 40.0%
GTATTCAACAACTGAAGGTG+CGG + chr3.3:42615260-42615279 None:intergenic 40.0%
GTCCATATAACAATCGGTGA+TGG - chr3.3:42619136-42619155 MS.gene30151:intron 40.0%
GTTATCCTGGAGTTGAGATT+GGG - chr3.3:42613714-42613733 MS.gene30151:intron 40.0%
GTTCCGTATTCAACAACTGA+AGG + chr3.3:42615265-42615284 None:intergenic 40.0%
TAAACTCAACACATGCCTTC+TGG - chr3.3:42619408-42619427 MS.gene30151:CDS 40.0%
TACGATGTTAACCTGATTCC+TGG - chr3.3:42615547-42615566 MS.gene30151:CDS 40.0%
TATGTGTCAACAATTGGAGG+AGG + chr3.3:42617879-42617898 None:intergenic 40.0%
TCCTCAGTAACTACGTATAC+GGG + chr3.3:42618444-42618463 None:intergenic 40.0%
TGGAATATGACAAGCAACCA+AGG + chr3.3:42618848-42618867 None:intergenic 40.0%
TGTTATCCTGGAGTTGAGAT+TGG - chr3.3:42613713-42613732 MS.gene30151:intron 40.0%
TTGAATACGGAACATTGCCA+GGG - chr3.3:42615272-42615291 MS.gene30151:intron 40.0%
TTGCCAATTCATTAGGGGTT+GGG - chr3.3:42616718-42616737 MS.gene30151:intron 40.0%
TTGCGTCATTGATGTTTGGT+AGG - chr3.3:42619315-42619334 MS.gene30151:intron 40.0%
TTGGATTCTTGCTCATTCGA+TGG + chr3.3:42617075-42617094 None:intergenic 40.0%
TTGTCATATTCCATGTCCCA+TGG - chr3.3:42618855-42618874 MS.gene30151:intron 40.0%
! AGTAACAGGAAGTACAAGAC+TGG + chr3.3:42614200-42614219 None:intergenic 40.0%
! CATATAACAATCGGTGATGG+AGG - chr3.3:42619139-42619158 MS.gene30151:intron 40.0%
! CTCCATCACCGATTGTTATA+TGG + chr3.3:42619141-42619160 None:intergenic 40.0%
! GGCAAAAAAAACCCGTTTTC+CGG + chr3.3:42613403-42613422 None:intergenic 40.0%
! GGCGTTTTACTTGCTTCATT+TGG - chr3.3:42613943-42613962 MS.gene30151:CDS 40.0%
! GTAACAGGAAGTACAAGACT+GGG + chr3.3:42614199-42614218 None:intergenic 40.0%
! TAAAAAGCACGGACAATCCT+CGG + chr3.3:42617771-42617790 None:intergenic 40.0%
! TAACAGGAAGTACAAGACTG+GGG + chr3.3:42614198-42614217 None:intergenic 40.0%
! TCTACAGACGGATTTGTCAA+AGG - chr3.3:42618805-42618824 MS.gene30151:intron 40.0%
! TGGTGATATGATGGAAACCA+TGG - chr3.3:42618910-42618929 MS.gene30151:intron 40.0%
! TGTAAGGTTTTTCTAGGCTG+AGG + chr3.3:42614597-42614616 None:intergenic 40.0%
! TTTTGTTGAGGCATGAGAGT+TGG + chr3.3:42616106-42616125 None:intergenic 40.0%
!! GGGTTGTTTTGTGGTTTACT+GGG - chr3.3:42614159-42614178 MS.gene30151:intron 40.0%
!! GTTTACTTTTACCGATGTGG+TGG - chr3.3:42615400-42615419 MS.gene30151:intron 40.0%
!! TGGGTTGTTTTGTGGTTTAC+TGG - chr3.3:42614158-42614177 MS.gene30151:intron 40.0%
!! TGTGTCATTATTGGTGTTGG+TGG + chr3.3:42614432-42614451 None:intergenic 40.0%
!! TTGATTTGGTCCAACCAGTT+TGG + chr3.3:42615501-42615520 None:intergenic 40.0%
!!! ACCCATTTTGGGTTGTTTTG+TGG - chr3.3:42614150-42614169 MS.gene30151:intron 40.0%
!!! AGCGTCGATTTAGTTTTTGC+TGG - chr3.3:42618953-42618972 MS.gene30151:intron 40.0%
!!! CATGTGCTGTTGTTTTGTTG+AGG + chr3.3:42616118-42616137 None:intergenic 40.0%
!!! GAGCATTCAGAGTTTTGAGT+AGG + chr3.3:42614020-42614039 None:intergenic 40.0%
!!! GCTTTAGTAGTTTTGGGATC+AGG - chr3.3:42618097-42618116 MS.gene30151:intron 40.0%
!!! TTTTTTTGCCTCCCCTTCTA+CGG - chr3.3:42613413-42613432 MS.gene30151:CDS 40.0%
AAAAACAGATCTAGTCGCGG+CGG + chr3.3:42613364-42613383 None:intergenic 45.0%
AACACAGCTCATCAAGGTGA+AGG - chr3.3:42618887-42618906 MS.gene30151:intron 45.0%
AATGCGACTCAGTTCGTATC+TGG - chr3.3:42613903-42613922 MS.gene30151:CDS 45.0%
ACACCAATAATGACACACCG+AGG - chr3.3:42614435-42614454 MS.gene30151:intron 45.0%
ACCACGGCAGATAAAGTCTA+AGG + chr3.3:42613815-42613834 None:intergenic 45.0%
ACCCTCTTCTTATCCTCAAC+AGG - chr3.3:42614635-42614654 MS.gene30151:intron 45.0%
ACCTTAGACTTTATCTGCCG+TGG - chr3.3:42613811-42613830 MS.gene30151:intron 45.0%
ACGCTAGCAGCATAAAGCAA+TGG + chr3.3:42618938-42618957 None:intergenic 45.0%
ACTGAGAGAGAAAGGGAGAA+GGG + chr3.3:42615987-42616006 None:intergenic 45.0%
AGACCATGGATGGTAACACA+AGG - chr3.3:42615646-42615665 MS.gene30151:intron 45.0%
AGACCCAACCCCTAATGAAT+TGG + chr3.3:42616724-42616743 None:intergenic 45.0%
AGATACGAACTGAGTCGCAT+TGG + chr3.3:42613904-42613923 None:intergenic 45.0%
AGATTGTTGCCAGTGGTTAG+AGG + chr3.3:42615915-42615934 None:intergenic 45.0%
AGCAAGTAAAACGCCCTTTC+AGG + chr3.3:42613938-42613957 None:intergenic 45.0%
AGCATAAAGCAATGGCTCCA+TGG + chr3.3:42618930-42618949 None:intergenic 45.0%
AGGGGTTGTTTAACCTGTTG+AGG + chr3.3:42614651-42614670 None:intergenic 45.0%
AGGTGAAGGTGGTGATATGA+TGG - chr3.3:42618901-42618920 MS.gene30151:intron 45.0%
ATAGTCTGTTGATGCCCGAA+AGG - chr3.3:42613741-42613760 MS.gene30151:CDS 45.0%
ATATAGATCCACAGCCGAAG+TGG - chr3.3:42619339-42619358 MS.gene30151:intron 45.0%
CAAGGGAATCATGAAGTCAG+GGG - chr3.3:42615664-42615683 MS.gene30151:intron 45.0%
CACAAGGGAATCATGAAGTC+AGG - chr3.3:42615662-42615681 MS.gene30151:intron 45.0%
CACCAATAATGACACACCGA+GGG - chr3.3:42614436-42614455 MS.gene30151:intron 45.0%
CAGCTGTTGAAGTTACTGAC+AGG + chr3.3:42614560-42614579 None:intergenic 45.0%
CAGGTACACATTTCATTGGC+AGG - chr3.3:42615193-42615212 MS.gene30151:intron 45.0%
CAGTTCGTATCTGGTTGGAT+TGG - chr3.3:42613912-42613931 MS.gene30151:CDS 45.0%
CCAACGACGCTGTATATAGT+CGG + chr3.3:42615587-42615606 None:intergenic 45.0%
CGACACTTGAAAAGGAACAG+AGG + chr3.3:42619257-42619276 None:intergenic 45.0%
CGACTATATACAGCGTCGTT+GGG - chr3.3:42615585-42615604 MS.gene30151:CDS 45.0%
CGTAACCAAATGGGGATGAA+TGG - chr3.3:42617169-42617188 MS.gene30151:intron 45.0%
CTAAAGGGCCTATTACCGTA+TGG + chr3.3:42615369-42615388 None:intergenic 45.0%
CTCAGGGAAGATACACCATA+CGG - chr3.3:42615351-42615370 MS.gene30151:intron 45.0%
CTGCCAATGAAATGTGTACC+TGG + chr3.3:42615195-42615214 None:intergenic 45.0%
CTGTATCTGCATTCTTCCCT+CGG + chr3.3:42614455-42614474 None:intergenic 45.0%
CTTCATTTGGAAGGGAGTTG+AGG - chr3.3:42613956-42613975 MS.gene30151:CDS 45.0%
GAACCGTTGAATGGTTGTTG+TGG + chr3.3:42617116-42617135 None:intergenic 45.0%
GAAGTGCAAAATCCTTGGTG+AGG - chr3.3:42618282-42618301 MS.gene30151:CDS 45.0%
GAATGGTTGTTGTGGCATCA+CGG + chr3.3:42617108-42617127 None:intergenic 45.0%
GACCATGGATGGTAACACAA+GGG - chr3.3:42615647-42615666 MS.gene30151:intron 45.0%
GCATCACGGAAAATCGTTGT+TGG + chr3.3:42617094-42617113 None:intergenic 45.0%
GGTGCTCACATTATCATGCT+TGG - chr3.3:42617383-42617402 MS.gene30151:CDS 45.0%
GGTTAGAGGAAGGATGAATG+AGG + chr3.3:42615901-42615920 None:intergenic 45.0%
GGTTTCAATGCAAGTAAGGG+TGG + chr3.3:42618191-42618210 None:intergenic 45.0%
GTCGTTACATTCGAGACAAG+TGG - chr3.3:42617482-42617501 MS.gene30151:CDS 45.0%
GTTATATGGACAGCTCCACA+AGG + chr3.3:42619127-42619146 None:intergenic 45.0%
GTTGAATACGGAACATTGCC+AGG - chr3.3:42615271-42615290 MS.gene30151:intron 45.0%
TAACTCACCATGACCGAAAC+TGG + chr3.3:42619381-42619400 None:intergenic 45.0%
TAGTCTGTTGATGCCCGAAA+GGG - chr3.3:42613742-42613761 MS.gene30151:CDS 45.0%
TCAGTAACTACGTATACGGG+AGG + chr3.3:42618441-42618460 None:intergenic 45.0%
TCCCGTATACGTAGTTACTG+AGG - chr3.3:42618440-42618459 MS.gene30151:intron 45.0%
TGGTTGGACCAAATCAACGT+TGG - chr3.3:42615504-42615523 MS.gene30151:CDS 45.0%
TGTCAAAGGTGGACAGGAAA+AGG - chr3.3:42618819-42618838 MS.gene30151:intron 45.0%
TTCATCCTTCCTCTAACCAC+TGG - chr3.3:42615903-42615922 MS.gene30151:intron 45.0%
TTCCCTTGTGTTACCATCCA+TGG + chr3.3:42615652-42615671 None:intergenic 45.0%
TTCGGGCATCAACAGACTAT+AGG + chr3.3:42613741-42613760 None:intergenic 45.0%
TTCGTCCATTCATCCCCATT+TGG + chr3.3:42617177-42617196 None:intergenic 45.0%
! AACAGGAAGTACAAGACTGG+GGG + chr3.3:42614197-42614216 None:intergenic 45.0%
! ACAGACGGATTTGTCAAAGG+TGG - chr3.3:42618808-42618827 MS.gene30151:intron 45.0%
! CATGGTCTAGAACTAGCAAG+TGG + chr3.3:42615634-42615653 None:intergenic 45.0%
! CGGTGTGTCATTATTGGTGT+TGG + chr3.3:42614435-42614454 None:intergenic 45.0%
! GAAGAGGGTTTAGAATCCCA+TGG + chr3.3:42614624-42614643 None:intergenic 45.0%
! GAGGTGGAAAATGCCATTTG+AGG - chr3.3:42617316-42617335 MS.gene30151:CDS 45.0%
! GTTTTGTGGTTTACTGGGTC+AGG - chr3.3:42614164-42614183 MS.gene30151:intron 45.0%
! TTCCCTCGGTGTGTCATTAT+TGG + chr3.3:42614441-42614460 None:intergenic 45.0%
!! AGATCTGTTTTTCTCGACGG+TGG - chr3.3:42613372-42613391 MS.gene30151:CDS 45.0%
!! CACTTGCTAGTTCTAGACCA+TGG - chr3.3:42615632-42615651 MS.gene30151:intron 45.0%
!! CTGTTACAGGAAGTGCTGAT+TGG - chr3.3:42613645-42613664 MS.gene30151:intron 45.0%
!! GAGAGTTGGTTGATGAAGAC+CGG + chr3.3:42616092-42616111 None:intergenic 45.0%
!! GAGGATTGTCCGTGCTTTTT+AGG - chr3.3:42617770-42617789 MS.gene30151:intron 45.0%
!! TGCTAGTTCTAGACCATGGA+TGG - chr3.3:42615636-42615655 MS.gene30151:intron 45.0%
!! TTACAGGAAGTGCTGATTGG+TGG - chr3.3:42613648-42613667 MS.gene30151:intron 45.0%
!! TTTGCTGTTGTCGGAGATCT+TGG - chr3.3:42615475-42615494 MS.gene30151:CDS 45.0%
!!! TTTTACCGATGTGGTGGACA+AGG - chr3.3:42615406-42615425 MS.gene30151:intron 45.0%
!! AAATTATTAAAGAAAATTAT+TGG + chr3.3:42616424-42616443 None:intergenic 5.0%
!!! TTGTTTTTAAATTTAAATTT+GGG - chr3.3:42618678-42618697 MS.gene30151:intron 5.0%
!!! TTTGTTTTTAAATTTAAATT+TGG - chr3.3:42618677-42618696 MS.gene30151:intron 5.0%
AAAAGACACCCAGCCGTAGA+AGG + chr3.3:42613429-42613448 None:intergenic 50.0%
AAAGACACCCAGCCGTAGAA+GGG + chr3.3:42613428-42613447 None:intergenic 50.0%
AACGTCTGATACCCACATGC+CGG + chr3.3:42613587-42613606 None:intergenic 50.0%
AATCCAGCGAACCCACGTAT+GGG + chr3.3:42614075-42614094 None:intergenic 50.0%
AATGCATGCATCCCTCACCA+AGG + chr3.3:42618297-42618316 None:intergenic 50.0%
ACAGCTCATCAAGGTGAAGG+TGG - chr3.3:42618890-42618909 MS.gene30151:intron 50.0%
ATACCGAGCGTTCATATGCG+TGG + chr3.3:42618985-42619004 None:intergenic 50.0%
CAAGTAAGGGTGGTAGTCCT+AGG + chr3.3:42618181-42618200 None:intergenic 50.0%
CAGGACGACTGAGAGAGAAA+GGG + chr3.3:42615994-42616013 None:intergenic 50.0%
CCAAGAGCAAAGCAGATCTG+AGG + chr3.3:42613484-42613503 None:intergenic 50.0%
CCGACTATATACAGCGTCGT+TGG - chr3.3:42615584-42615603 MS.gene30151:CDS 50.0%
CCTCAGATCTGCTTTGCTCT+TGG - chr3.3:42613481-42613500 MS.gene30151:CDS 50.0%
CGACTCAGTTCGTATCTGGT+TGG - chr3.3:42613907-42613926 MS.gene30151:CDS 50.0%
CGGAGCTACATGTAACTGAG+GGG - chr3.3:42615687-42615706 MS.gene30151:intron 50.0%
CGGATTTGTCAAAGGTGGAC+AGG - chr3.3:42618813-42618832 MS.gene30151:intron 50.0%
CTGCTTTGCTCTTGGCCAAT+CGG - chr3.3:42613489-42613508 MS.gene30151:CDS 50.0%
GACTGAGAGAGAAAGGGAGA+AGG + chr3.3:42615988-42616007 None:intergenic 50.0%
GAGATCTTGGCCAAACTGGT+TGG - chr3.3:42615488-42615507 MS.gene30151:CDS 50.0%
GCGGAGCTACATGTAACTGA+GGG - chr3.3:42615686-42615705 MS.gene30151:intron 50.0%
GGATTTGTCGTCAGTAACCC+AGG + chr3.3:42615239-42615258 None:intergenic 50.0%
TAGGACCCAATCTCAACTCC+AGG + chr3.3:42613722-42613741 None:intergenic 50.0%
TCACGGAACTCTGACCACTT+CGG + chr3.3:42619356-42619375 None:intergenic 50.0%
TGCTAGACTCTGTTGGGTCA+GGG + chr3.3:42615800-42615819 None:intergenic 50.0%
TGGAAGGGAGTTGAGGAACT+TGG - chr3.3:42613963-42613982 MS.gene30151:CDS 50.0%
TGGACAGGAAAAGGACACCT+TGG - chr3.3:42618828-42618847 MS.gene30151:intron 50.0%
TGTCCACGCATATGAACGCT+CGG - chr3.3:42618979-42618998 MS.gene30151:intron 50.0%
TGTTGCCAGTGGTTAGAGGA+AGG + chr3.3:42615911-42615930 None:intergenic 50.0%
TTCGGTCGAGATTTGCAAGC+TGG - chr3.3:42613547-42613566 MS.gene30151:intron 50.0%
!! AGGAAGTGCTGATTGGTGGT+GGG - chr3.3:42613652-42613671 MS.gene30151:intron 50.0%
!! AGTTGGTTGATGAAGACCGG+AGG + chr3.3:42616089-42616108 None:intergenic 50.0%
!! CAACACATGCCTTCTGGAGT+TGG - chr3.3:42619414-42619433 MS.gene30151:CDS 50.0%
!! CTGGTTGGATTGGCCTGAAA+GGG - chr3.3:42613922-42613941 MS.gene30151:CDS 50.0%
!! GGAGGAGGCATCTAGAAAAC+AGG + chr3.3:42617864-42617883 None:intergenic 50.0%
!! GGTGATGGAGGGAACAAAGA+AGG - chr3.3:42619151-42619170 MS.gene30151:intron 50.0%
!! GGTGTTTTGAGCTGGAACTC+AGG + chr3.3:42615433-42615452 None:intergenic 50.0%
!! TCTGGTTGGATTGGCCTGAA+AGG - chr3.3:42613921-42613940 MS.gene30151:CDS 50.0%
AACTCTGACCACTTCGGCTG+TGG + chr3.3:42619350-42619369 None:intergenic 55.0%
AAGACACCCAGCCGTAGAAG+GGG + chr3.3:42613427-42613446 None:intergenic 55.0%
AAGGGAGAAGGGTGGTGTGT+CGG + chr3.3:42615976-42615995 None:intergenic 55.0%
AAGTTTGAACCCCCTGACCC+AGG - chr3.3:42617222-42617241 MS.gene30151:intron 55.0%
ACCAATGCATGTCCGACACC+GGG - chr3.3:42617735-42617754 MS.gene30151:intron 55.0%
ACCACTGGCAACAATCTCCC+AGG - chr3.3:42615918-42615937 MS.gene30151:intron 55.0%
ACGAAAGGTCGCCAGGAATC+AGG + chr3.3:42615561-42615580 None:intergenic 55.0%
ACGGTGGTTCGTCCGGAAAA+CGG - chr3.3:42613388-42613407 MS.gene30151:CDS 55.0%
AGCACGGACAATCCTCGGTT+AGG + chr3.3:42617766-42617785 None:intergenic 55.0%
ATCCTCGGTTAGGTGTGTCC+CGG + chr3.3:42617756-42617775 None:intergenic 55.0%
CAATCCAGCGAACCCACGTA+TGG + chr3.3:42614076-42614095 None:intergenic 55.0%
CACCAATGCATGTCCGACAC+CGG - chr3.3:42617734-42617753 MS.gene30151:intron 55.0%
CAGAACCTCCCAAGACCGAT+TGG + chr3.3:42613507-42613526 None:intergenic 55.0%
CAGGACCTTGTCCACCACAT+CGG + chr3.3:42615414-42615433 None:intergenic 55.0%
CTCTACGCACCTAGCCCTTT+CGG + chr3.3:42613759-42613778 None:intergenic 55.0%
GAAGTGGTCAGAGTTCCGTG+AGG - chr3.3:42619355-42619374 MS.gene30151:intron 55.0%
GACGGTGCATAACACGACCA+CGG + chr3.3:42613831-42613850 None:intergenic 55.0%
GAGAGAGAAAGGGAGAAGGG+TGG + chr3.3:42615984-42616003 None:intergenic 55.0%
GAGTTCCGTGAGGCCAGTTT+CGG - chr3.3:42619365-42619384 MS.gene30151:intron 55.0%
GCAGGACGACTGAGAGAGAA+AGG + chr3.3:42615995-42616014 None:intergenic 55.0%
GCTCTTGGCCAATCGGTCTT+GGG - chr3.3:42613496-42613515 MS.gene30151:CDS 55.0%
GGCGGAGCTACATGTAACTG+AGG - chr3.3:42615685-42615704 MS.gene30151:intron 55.0%
GGGAATCATGAAGTCAGGGG+CGG - chr3.3:42615667-42615686 MS.gene30151:intron 55.0%
GTCGGAGATCTTGGCCAAAC+TGG - chr3.3:42615484-42615503 MS.gene30151:CDS 55.0%
GTCGTTGGGACACGTTTGGT+AGG - chr3.3:42615599-42615618 MS.gene30151:CDS 55.0%
GTGCTAGACTCTGTTGGGTC+AGG + chr3.3:42615801-42615820 None:intergenic 55.0%
GTGGTCGTGTTATGCACCGT+CGG - chr3.3:42613830-42613849 MS.gene30151:intron 55.0%
TCTACGCACCTAGCCCTTTC+GGG + chr3.3:42613758-42613777 None:intergenic 55.0%
TGCTCTTGGCCAATCGGTCT+TGG - chr3.3:42613495-42613514 MS.gene30151:CDS 55.0%
TGTTGATGCCCGAAAGGGCT+AGG - chr3.3:42613747-42613766 MS.gene30151:CDS 55.0%
TTTCTCGACGGTGGTTCGTC+CGG - chr3.3:42613381-42613400 MS.gene30151:CDS 55.0%
! AGGTACTCCGCGCTGCTTTA+TGG - chr3.3:42618117-42618136 MS.gene30151:intron 55.0%
! ATTCCGGTGCCAACTCCAGA+AGG + chr3.3:42619426-42619445 None:intergenic 55.0%
! CATGACCGAAACTGGCCTCA+CGG + chr3.3:42619373-42619392 None:intergenic 55.0%
! CTGCGGTGCTAGACTCTGTT+GGG + chr3.3:42615806-42615825 None:intergenic 55.0%
!! ATGCCTTCTGGAGTTGGCAC+CGG - chr3.3:42619420-42619439 MS.gene30151:CDS 55.0%
!! CAGGAAGTGCTGATTGGTGG+TGG - chr3.3:42613651-42613670 MS.gene30151:intron 55.0%
!! GAGCTGGTGGTGTTTTGAGC+TGG + chr3.3:42615441-42615460 None:intergenic 55.0%
!! GGGTTTGTCTCCGACTTGGT+TGG - chr3.3:42613672-42613691 MS.gene30151:intron 55.0%
!! GGTTGATGAAGACCGGAGGA+GGG + chr3.3:42616085-42616104 None:intergenic 55.0%
!! TGGTGGGTTTGTCTCCGACT+TGG - chr3.3:42613668-42613687 MS.gene30151:intron 55.0%
!! TGGTTGATGAAGACCGGAGG+AGG + chr3.3:42616086-42616105 None:intergenic 55.0%
AACAGATCTAGTCGCGGCGG+CGG + chr3.3:42613361-42613380 None:intergenic 60.0%
AGGAGGGTGGTAGAAGGAGG+AGG + chr3.3:42616069-42616088 None:intergenic 60.0%
AGTGGCGTTGCCAGGAACCT+GGG + chr3.3:42617242-42617261 None:intergenic 60.0%
AGTTGTGCGCAGTGATGCGC+TGG + chr3.3:42615949-42615968 None:intergenic 60.0%
CAGCGTCGTTGGGACACGTT+TGG - chr3.3:42615595-42615614 MS.gene30151:CDS 60.0%
CCAACAGAGTCTAGCACCGC+AGG - chr3.3:42615804-42615823 MS.gene30151:intron 60.0%
CCGGAATGACGATGACGAGC+CGG - chr3.3:42619439-42619458 MS.gene30151:CDS 60.0%
CGCTGGATTGTCCGTGGTAG+TGG - chr3.3:42614086-42614105 MS.gene30151:intron 60.0%
CGGTGGTTCGTCCGGAAAAC+GGG - chr3.3:42613389-42613408 MS.gene30151:CDS 60.0%
CGTGAGGCCAGTTTCGGTCA+TGG - chr3.3:42619371-42619390 MS.gene30151:intron 60.0%
CTCCTTCTACCACCCTCCTC+CGG - chr3.3:42616070-42616089 MS.gene30151:intron 60.0%
CTTCATGCAGTGGCGTTGCC+AGG + chr3.3:42617250-42617269 None:intergenic 60.0%
CTTGGCCAATCGGTCTTGGG+AGG - chr3.3:42613499-42613518 MS.gene30151:CDS 60.0%
GATCTGAGGAGCAGCAGCGA+CGG + chr3.3:42613470-42613489 None:intergenic 60.0%
GCCTGGGAGATTGTTGCCAG+TGG + chr3.3:42615922-42615941 None:intergenic 60.0%
GCGTAGAGACGCCGTGTTGA+CGG - chr3.3:42613771-42613790 MS.gene30151:CDS 60.0%
GGAGGGTGGTAGAAGGAGGA+GGG + chr3.3:42616068-42616087 None:intergenic 60.0%
GGGGATTCAAGTGAACCCCC+TGG - chr3.3:42615706-42615725 MS.gene30151:intron 60.0%
GGTTAGGTGTGTCCCGGTGT+CGG + chr3.3:42617750-42617769 None:intergenic 60.0%
GTCGTGTTATGCACCGTCGG+TGG - chr3.3:42613833-42613852 MS.gene30151:intron 60.0%
GTGCAGCGGAGAGATTCCGT+CGG + chr3.3:42616044-42616063 None:intergenic 60.0%
GTTGCCAGGAACCTGGGTCA+GGG + chr3.3:42617236-42617255 None:intergenic 60.0%
TCGGCATACGAAAGGTCGCC+AGG + chr3.3:42615568-42615587 None:intergenic 60.0%
TCGGTTTCGCGCCCATACGT+GGG - chr3.3:42614061-42614080 MS.gene30151:CDS 60.0%
TGATACCCACATGCCGGCGA+CGG + chr3.3:42613581-42613600 None:intergenic 60.0%
TGATGAAGACCGGAGGAGGG+TGG + chr3.3:42616082-42616101 None:intergenic 60.0%
TGGGTTCGCTGGATTGTCCG+TGG - chr3.3:42614080-42614099 MS.gene30151:intron 60.0%
TTCGGTTTCGCGCCCATACG+TGG - chr3.3:42614060-42614079 MS.gene30151:CDS 60.0%
TTGCCAGGAACCTGGGTCAG+GGG + chr3.3:42617235-42617254 None:intergenic 60.0%
TTGCCTCCCCTTCTACGGCT+GGG - chr3.3:42613418-42613437 MS.gene30151:CDS 60.0%
TTTGCCTCCCCTTCTACGGC+TGG - chr3.3:42613417-42613436 MS.gene30151:CDS 60.0%
! CCGGCTCGTCATCGTCATTC+CGG + chr3.3:42619442-42619461 None:intergenic 60.0%
! CCTGCGGTGCTAGACTCTGT+TGG + chr3.3:42615807-42615826 None:intergenic 60.0%
! TCCCGGTGTCGGACATGCAT+TGG + chr3.3:42617739-42617758 None:intergenic 60.0%
AACCCCCTGACCCAGGTTCC+TGG - chr3.3:42617229-42617248 MS.gene30151:CDS 65.0%
ACACCCAGCCGTAGAAGGGG+AGG + chr3.3:42613424-42613443 None:intergenic 65.0%
CACCGGGACACACCTAACCG+AGG - chr3.3:42617751-42617770 MS.gene30151:intron 65.0%
CAGTGGCGTTGCCAGGAACC+TGG + chr3.3:42617243-42617262 None:intergenic 65.0%
CGGAGGAGGGTGGTAGAAGG+AGG + chr3.3:42616072-42616091 None:intergenic 65.0%
CGTTGCCAGGAACCTGGGTC+AGG + chr3.3:42617237-42617256 None:intergenic 65.0%
GACCGGAGGAGGGTGGTAGA+AGG + chr3.3:42616075-42616094 None:intergenic 65.0%
GCTGGTGTTCTCTCCGTCGC+CGG - chr3.3:42613565-42613584 MS.gene30151:intron 65.0%
TCTCTCCGTCGCCGGCATGT+GGG - chr3.3:42613573-42613592 MS.gene30151:intron 65.0%
TGCCAGGAACCTGGGTCAGG+GGG + chr3.3:42617234-42617253 None:intergenic 65.0%
TGTGCGCAGTGATGCGCTGG+TGG + chr3.3:42615946-42615965 None:intergenic 65.0%
TTCTCTCCGTCGCCGGCATG+TGG - chr3.3:42613572-42613591 MS.gene30151:intron 65.0%
! AGAAGGAGGAGGGCGTGCAG+CGG + chr3.3:42616058-42616077 None:intergenic 65.0%
AGATCTAGTCGCGGCGGCGG+CGG + chr3.3:42613358-42613377 None:intergenic 70.0%
GAGGAGCAGCAGCGACGGAC+AGG + chr3.3:42613465-42613484 None:intergenic 70.0%
GCGCCCATACGTGGGTTCGC+TGG - chr3.3:42614069-42614088 MS.gene30151:CDS 70.0%
! AGTGATGCGCTGGTGGCGCC+TGG + chr3.3:42615939-42615958 None:intergenic 70.0%
! GTGATGCGCTGGTGGCGCCT+GGG + chr3.3:42615938-42615957 None:intergenic 70.0%
! GTCGCGGCGGCGGCGGCGAC+AGG + chr3.3:42613351-42613370 None:intergenic 90.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 42613345 42619556 42613345 ID=MS.gene30151
chr3.3 mRNA 42613345 42619556 42613345 ID=MS.gene30151.t1;Parent=MS.gene30151
chr3.3 exon 42619391 42619556 42619391 ID=MS.gene30151.t1.exon1;Parent=MS.gene30151.t1
chr3.3 CDS 42619391 42619556 42619391 ID=cds.MS.gene30151.t1;Parent=MS.gene30151.t1
chr3.3 exon 42619208 42619247 42619208 ID=MS.gene30151.t1.exon2;Parent=MS.gene30151.t1
chr3.3 CDS 42619208 42619247 42619208 ID=cds.MS.gene30151.t1;Parent=MS.gene30151.t1
chr3.3 exon 42618245 42618386 42618245 ID=MS.gene30151.t1.exon3;Parent=MS.gene30151.t1
chr3.3 CDS 42618245 42618386 42618245 ID=cds.MS.gene30151.t1;Parent=MS.gene30151.t1
chr3.3 exon 42617223 42617705 42617223 ID=MS.gene30151.t1.exon4;Parent=MS.gene30151.t1
chr3.3 CDS 42617223 42617705 42617223 ID=cds.MS.gene30151.t1;Parent=MS.gene30151.t1
chr3.3 exon 42615447 42615626 42615447 ID=MS.gene30151.t1.exon5;Parent=MS.gene30151.t1
chr3.3 CDS 42615447 42615626 42615447 ID=cds.MS.gene30151.t1;Parent=MS.gene30151.t1
chr3.3 exon 42613901 42614089 42613901 ID=MS.gene30151.t1.exon6;Parent=MS.gene30151.t1
chr3.3 CDS 42613901 42614089 42613901 ID=cds.MS.gene30151.t1;Parent=MS.gene30151.t1
chr3.3 exon 42613716 42613804 42613716 ID=MS.gene30151.t1.exon7;Parent=MS.gene30151.t1
chr3.3 CDS 42613716 42613804 42613716 ID=cds.MS.gene30151.t1;Parent=MS.gene30151.t1
chr3.3 exon 42613345 42613564 42613345 ID=MS.gene30151.t1.exon8;Parent=MS.gene30151.t1
chr3.3 CDS 42613345 42613564 42613345 ID=cds.MS.gene30151.t1;Parent=MS.gene30151.t1
Gene Sequence

>MS.gene30151

ATGCCTGTCGCCGCCGCCGCCGCGACTAGATCTGTTTTTCTCGACGGTGGTTCGTCCGGAAAACGGGTTTTTTTTGCCTCCCCTTCTACGGCTGGGTGTCTTTTAGATGATTTGTGGCCTGTCCGTCGCTGCTGCTCCTCAGATCTGCTTTGCTCTTGGCCAATCGGTCTTGGGAGGTTCTGTTTTTTGTTTTATGTTTCTTTTCGGTCGAGATTTGCAAGCTGGTGTTCTCTCCGTCGCCGGCATGTGGGTATCAGACGTTTTTTCTGTGCTGTTTTTCGTTTCTGTATTGTTTGGTTTCTGTTACAGGAAGTGCTGATTGGTGGTGGGTTTGTCTCCGACTTGGTTGGTTCGTATATCTTGATTCTTGTTATCCTGGAGTTGAGATTGGGTCCTATAGTCTGTTGATGCCCGAAAGGGCTAGGTGCGTAGAGACGCCGTGTTGACGGTAGTTTTCGTTTATCGTACCTTAGACTTTATCTGCCGTGGTCGTGTTATGCACCGTCGGTGGACTGTTTAGAATTTTCGTCGTCTGAATACGGCTGCTGTTTCAAGACCAATGCGACTCAGTTCGTATCTGGTTGGATTGGCCTGAAAGGGCGTTTTACTTGCTTCATTTGGAAGGGAGTTGAGGAACTTGGATCGTTTCTGTGTTGGCAGACGATTCATACGCCTACTCAAAACTCTGAATGCTCACTCTGCGTCTTTTTTGCAATTCGGTTTCGCGCCCATACGTGGGTTCGCTGGATTGTCCGTGGTAGTGGTTGTTTCTTTTTATACCACTTATGTTTTGAATTGTTGTATCACCCATTTTGGGTTGTTTTGTGGTTTACTGGGTCAGGTACATGTCCCCCAGTCTTGTACTTCCTGTTACTTTTTTATTTAGTTTTCTATTTGGCTTAAAAAAAAAAAAAATTTAAAGATGAACATATTCTAAATTTTTAAGTCAACTCCATATCAAACGCAAGTGGATTATTATAATATATTTTTCTAACAGTTGTGAAAGCTTTTTATCTGAAAAAGTAATAAAACAAAAAAGTGTCACACTCACACAGTGACAAAAAGTAAAAGTGCACAACAGAATCCACCAACACCAATAATGACACACCGAGGGAAGAATGCAGATACAGATAGATCCTGAAGTACATTCTTGTCCTTCATTATTTCCAGCATAACAATGAAACTCAAACTGATTCCAACAGTTTTACTGATCCTGTCAGTAACTTCAACAGCTGATAACTATGTCAGACCTCAGCCTAGAAAAACCTTACATCTTCCATGGGATTCTAAACCCTCTTCTTATCCTCAACAGGTTAAACAACCCCTTCATTTATGACCTCATATTTTTCTGCAAAATTACTACTTTTGTATACCCTTTTGCTTTATTACTTAATCAATGTTATATTTTACTACTTTTTTTTTATTTTTTTTATTTTTGTCATGTGTTTTTGGTTTGGTTTTGTAAAAGAATCACGTTTATGTTTCTTGCATTTCTTTATTTAGATAATTTTCACTTTAATTTCATGTTGCACATGTCAAAAAGTTATTTCTAGGTGCAAAATTTAGTGAAGCTGCTAGGTTGATTTGAGAAATGGACAGCTTATAGCTTTGCCAGATGAAGAACCAATTCAATGAGCATATGAAAATAGCTTATAGCTTGTTTTTGGAAACAGTTTTACTTTGTTTTATCTTTTATTATAGAAATAGCTTATACATAAGCATTTATATGATAAACACTTACACTATACGCACTTAATGAAGCTGTTTATTCAAACAAGGAACCTTTATAAGGATGTTACTTTATGATAGTCATGTAGTTTCAGATTCTTACATGAAAAGTGTGTATTCCAGGTACACATTTCATTGGCAGGAGACAAGCATATGAGAGTTACCTGGGTTACTGACGACAAATCCGCACCTTCAGTTGTTGAATACGGAACATTGCCAGGGAAGTATGACAATGTAATTGAAGGTGAGACAACCTCTTACAGTTACATTTTCTACAGCTCAGGGAAGATACACCATACGGTAATAGGCCCTTTAGAGCCGAATTCTGTTTACTTTTACCGATGTGGTGGACAAGGTCCTGAGTTCCAGCTCAAAACACCACCAGCTCAATTTCCAATTAGTTTTGCTGTTGTCGGAGATCTTGGCCAAACTGGTTGGACCAAATCAACGTTGGATCACATTGACCAATGCAGATACGATGTTAACCTGATTCCTGGCGACCTTTCGTATGCCGACTATATACAGCGTCGTTGGGACACGTTTGGTAGGCTTGTGCAGCCACTTGCTAGTTCTAGACCATGGATGGTAACACAAGGGAATCATGAAGTCAGGGGCGGAGCTACATGTAACTGAGGGGATTCAAGTGAACCCCCTGGACTTAAAAAAAATACACGTACATCCATATGATTTTGCAAAATGAACCTCCTGAAATAATTTTTTTGCACCCTGACCCAACAGAGTCTAGCACCGCAGGTTCATTTCACTATTTGTTTCCTTCTCTCTATCGTTCTCACTTCTCTCTAAACTCTCTCATGTCCTCTACTACCTCATTCATCCTTCCTCTAACCACTGGCAACAATCTCCCAGGCGCCACCAGCGCATCACTGCGCACAACTGACACCGACACACCACCCTTCTCCCTTTCTCTCTCAGTCGTCCTGCTTATGTTCACACGAATCTTAATTTTGCCGACGGAATCTCTCCGCTGCACGCCCTCCTCCTTCTACCACCCTCCTCCGGTCTTCATCAACCAACTCTCATGCCTCAACAAAACAACAGCACATGCACAAGTAATGAATCCGTGGTTTTGTGATTTAGGAATATTGTAATTTTAGGGTTTTTTAGATTTGGAGATTTTGTTATATTCATCAAAATTGGGAATTTTTGTTGGTGATTACTTGTCCATTTGATCATTGTTGTTGTTAATTTTAATTTTTTTGTTGATTTTTCCAAACTGGAGATTGTTCATTACTTGTTTATTTGCTTCAAGTTATGAAGAAAATGAGTTTTCTAGGCTCCTAAAGATTATCTCCTCCTAAACCAAATCATGATATTCTGTTACCTGAATCCAATAATTTTCTTTAATAATTTGTGTGTTAAAGTGTCATTTATGTGAACTAAAACCTAGCTTCAAAGTTGTATTTTATTCAGTCTATTCTTAATCATGATTGATATATTTGTATAATTTAAGACATTGTTGAAGTTAGCATGTAGTGTAAACCAATTTTCTCATTCTGTCTAATTTAGTTGTCGTCCTTGTTTTTATGTTTTGTTCTTTAAACATTGTGTCTATTATTAAGAATAAGCATGTTAGAAATAATAGTGGTTGTTTTGATCTTGTGGATCAATTGTTTGGGCTGAAACATTGCCAATTCATTAGGGGTTGGGTCTGCATAACATCGAATATTTTTTTAGCAAGTATCAAATTGAGAGAATCATGAAGAGTTGATACACATCTTGACTCTTAAAAATATATGTTATAAGTGTAATCTCTTGAAAGAGATAATAGGCAGGATCAATTTTGATCATGAAAGTTTGCTATATTTAAAATAGTTGTCAATTATGGAAACTTTGGAAAGATTTAATCTCTTGATAGTTTGCTATCCACATTCTATTTGCTTTACATGATTAATTTTGCTTTCATTTGCGAAGAGAATTGCATTTTTTTAATTTCATTGTTGATGTTTTGTTGTTATAGGAAATTTTTAAAAAGAAGTTACCATCGAATGAGCAAGAATCCAACAACGATTTTCCGTGATGCCACAACAACCATTCAACGGTTCTTTTCTACTATGAAGATTGTGAGCATTAGATTGCGTAACCAAATGGGGATGAATGGACGAACAAATATTTCATGATTTATATTCAAAAGTTTGAACCCCCTGACCCAGGTTCCTGGCAACGCCACTGCATGAAGTAGAGCATATACCTTTGTTAAAGGATGGATTTATATCCTATAATTCGAGGTGGAAAATGCCATTTGAGGAAAGTGGATCAAGCTCGAATCTCTATTATTCTTTTGAAGTTGCTGGTGCTCACATTATCATGCTTGGTTCATATGATGATTATGACGTGTACTCAGAACAATATAAATGGCTAAAGGTTAGTTGGTTGCTCAATTGATCAAGTGTCGTTACATTCGAGACAAGTGGAATGTAATCTATTTCAAGCTATAAGTTTTTTTTCAATGAAAGTATGTCATGGCTATATCTTGCATTCGAAACTCCAATTTACATGATATTCACTGAACTGGTTATAAACTATCAAGCACGGACACATACACAGACATTGGACATGACACGTACACCGACACCAATAATAATTTGAGAAAGTGACATAATTCAGTGTAATCATCTGTGTTGGTGTTGTGTCAACGTCAGACACCAATGCATGTCCGACACCGGGACACACCTAACCGAGGATTGTCCGTGCTTTTTAGGTTATAAATAACTGTGAATGTGGTTAAACCTTACAACAAGAGGTGAAAAAAAAATAAGAAGTTGATTATCCTGTTTTCTAGATGCCTCCTCCAATTGTTGACACATAATATTCATTTTCTACTGCCATAAATGTCACTGTTTCTAGTTTTCTTCATTGTTTCTGTTATAAATTTTTCCCATGAACCTTGTGATGTTTCATGTTATAGGTTACAATGTTTGTTTCTACTAAACTTTAGGATTTATGTTTAGCTGTATATTGCTTTCTAGGTTTTGCAATAGCAGCCATCCTGCTAAACAATATTTTGCTTTAGTAGTTTTGGGATCAGGTACTCCGCGCTGCTTTATGGAATTATCAACATAGCAATGACATACATTCATATGAAAACCTAGGACTACCACCCTTACTTGCATTGAAACCAATGAATGACAAACATTTAGAAGTTACGTAACCAGAAATAACTGTTGCTTCTTCCTTCCCTTGATAATGATGAAGTGCAAAATCCTTGGTGAGGGATGCATGCATTGCATTTGCATATGGCTAGGATAAGCCACATAAATAAAAATAGAAGCCTTCGTAAAGATATGAATAGAATCAGGTCTTTAAATTCAGATATTAGAGACTTGAGCAATGTGAAAATGAAATATCCTCCCGTATACGTAGTTACTGAGGAAGAGAAACAGAGAAAAACTCTGAAGTTATAGTAGGTGTTCTGCTAATATTGTTTCGACATTGTGCCCATCTGATTATTTTTCTATTGCAATTTGTTGTATATATATTTTGTTGTGTTTTATTGTATAATTTTCTGTTAATTTAATTTGCTTGTTTCAGTTTTGTAATTTTGATGTTATTTGAACTTATCTAAATTTTAGTTTCAATGTTCATGTTTGTTTTTAAATTTAAATTTGGGAAAAAACTGTGTTGTAAGGGAAAATAGTCTGACCAAAATTAGTAGTTATTTTTTAATTTTTAAGTTCCGTTTATAATTATAATCCCTTTATATCTTCTTTGTGATCTACAGACGGATTTGTCAAAGGTGGACAGGAAAAGGACACCTTGGTTGCTTGTCATATTCCATGTCCCATGGTATAATAGTAACACAGCTCATCAAGGTGAAGGTGGTGATATGATGGAAACCATGGAGCCATTGCTTTATGCTGCTAGCGTCGATTTAGTTTTTGCTGGTCATGTCCACGCATATGAACGCTCGGTATGTTTATAAGATTTTTTTTTTTTAGTTTCATTTCTTTGTAAATTTACTTACTGGTCATAATTGAATCTTAAGCAATTCTTGTGTGATTGACAGAAACGTGTATATAATGGAAAATTGGATCCTTGTGGAGCTGTCCATATAACAATCGGTGATGGAGGGAACAAAGAAGGCTTAGCGCATAAGTAAGTTTCATTCTACCAAATGTTTTTTGAAGTTTTCAAATTCAACCTTTGAGTTTTCTCCGATACTACCTCTGTTCCTTTTCAAGTGTCGTTTAAGATTCTCTAATATCATTCTTACCATTTCTATGGTTGCGTCATTGATGTTTGGTAGGTATATAGATCCACAGCCGAAGTGGTCAGAGTTCCGTGAGGCCAGTTTCGGTCATGGTGAGTTAAAGATTGTAAACTCAACACATGCCTTCTGGAGTTGGCACCGGAATGACGATGACGAGCCGGTAAAATCTGATGATATCTGGATAACCTCCTTAGTTAATTCAGGATGTGTTGCTCAGAAGAAAACTGAACTTGAGCATGCACTTATAACACCCTAA
Protein sequence

>MS.gene30151.t1

MPVAAAAATRSVFLDGGSSGKRVFFASPSTAGCLLDDLWPVRRCCSSDLLCSWPIGSADWWWVCLRLGCITMKLKLIPTVLLILSVTSTADNYVRPQPRKTLHLPWDSKPSSYPQQVHISLAGDKHMRVTWVTDDKSAPSVVEYGTLPGKYDNVIEGETTSYSYIFYSSGKIHHTVIGPLEPNSVYFYRCGGQGPEFQLKTPPAQFPISFAVVGDLGQTGWTKSTLDHIDQCRYDVNLIPGDLSYADYIQRRWDTFGRLVQPLASSRPWMVTQGNHEHIPLLKDGFISYNSRWKMPFEESGSSSNLYYSFEVAGAHIIMLGSYDDYDVYSEQYKWLKTDLSKVDRKRTPWLLVIFHVPWYNSNTAHQGEGGDMMETMEPLLYAASVDLVFAGHVHAYERSKRVYNGKLDPCGAVHITIGDGGNKEGLAHKYIDPQPKWSEFREASFGHGELKIVNSTHAFWSWHRNDDDEPVKSDDIWITSLVNSGCVAQKKTELEHALITP