Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30526.t1 | XP_013456184.1 | 94.4 | 638 | 19 | 2 | 1 | 638 | 1 | 621 | 0.00E+00 | 1152.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30526.t1 | Q8YZH7 | 50.3 | 481 | 197 | 10 | 158 | 637 | 6 | 445 | 9.0e-124 | 445.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30526.t1 | A0A072UWG4 | 94.4 | 638 | 19 | 2 | 1 | 638 | 1 | 621 | 0.0e+00 | 1152.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene30526 | 0.806291 | 8.83E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene30526 | 0.802887 | 4.53E-49 | -1.69E-46 |
| MS.gene050783 | MS.gene30526 | 0.801464 | 8.89E-49 | -1.69E-46 |
| MS.gene050812 | MS.gene30526 | 0.863922 | 1.76E-64 | -1.69E-46 |
| MS.gene051171 | MS.gene30526 | 0.805041 | 1.62E-49 | -1.69E-46 |
| MS.gene051582 | MS.gene30526 | 0.804876 | 1.75E-49 | -1.69E-46 |
| MS.gene052322 | MS.gene30526 | 0.8207 | 5.97E-53 | -1.69E-46 |
| MS.gene054123 | MS.gene30526 | 0.808638 | 2.81E-50 | -1.69E-46 |
| MS.gene056497 | MS.gene30526 | 0.808308 | 3.30E-50 | -1.69E-46 |
| MS.gene056796 | MS.gene30526 | 0.802377 | 5.77E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene30526 | 0.807764 | 4.31E-50 | -1.69E-46 |
| MS.gene058276 | MS.gene30526 | 0.800476 | 1.42E-48 | -1.69E-46 |
| MS.gene058293 | MS.gene30526 | 0.804808 | 1.81E-49 | -1.69E-46 |
| MS.gene060407 | MS.gene30526 | 0.805086 | 1.58E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30526.t1 | MTR_4g065030 | 94.201 | 638 | 20 | 2 | 1 | 638 | 1 | 621 | 0.0 | 1212 |
| MS.gene30526.t1 | MTR_4g134500 | 31.650 | 515 | 277 | 14 | 158 | 637 | 40 | 514 | 2.80e-59 | 208 |
| MS.gene30526.t1 | MTR_3g073790 | 37.662 | 154 | 77 | 5 | 351 | 492 | 276 | 422 | 1.52e-16 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30526.t1 | AT3G12080 | 77.009 | 535 | 121 | 1 | 105 | 637 | 108 | 642 | 0.0 | 847 |
| MS.gene30526.t1 | AT3G12080 | 76.409 | 479 | 111 | 1 | 105 | 581 | 108 | 586 | 0.0 | 750 |
| MS.gene30526.t1 | AT5G39960 | 31.703 | 511 | 280 | 13 | 150 | 627 | 112 | 586 | 9.48e-58 | 206 |
| MS.gene30526.t1 | AT1G78010 | 33.533 | 167 | 97 | 5 | 366 | 532 | 320 | 472 | 4.35e-17 | 85.5 |
Find 157 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAACTTACCGGCGCTTTA+TGG | 0.166917 | 4.4:-41109432 | MS.gene30526:CDS |
| CGAGGGAGAGAGATGGATTT+TGG | 0.174332 | 4.4:+41116730 | None:intergenic |
| CTTCTTGACCTTGTTTGTTC+AGG | 0.227477 | 4.4:-41113442 | MS.gene30526:CDS |
| ATCCTTTGTAGAAGATTATC+AGG | 0.229187 | 4.4:+41115779 | None:intergenic |
| TTATGCAGGTGTCTGAATTT+TGG | 0.252199 | 4.4:-41114756 | MS.gene30526:CDS |
| ATTCACCGGCGCTGAACTTC+GGG | 0.265376 | 4.4:+41116686 | None:intergenic |
| GAAAATGGGAGTTGGGGTTT+TGG | 0.280572 | 4.4:+41116807 | None:intergenic |
| GTTTATATGGCCGATCATAT+TGG | 0.285141 | 4.4:-41115511 | MS.gene30526:CDS |
| TTTATATGGCCGATCATATT+GGG | 0.292903 | 4.4:-41115510 | MS.gene30526:CDS |
| CGTTCAAATGCGGGATTTCC+TGG | 0.294529 | 4.4:-41109398 | MS.gene30526:CDS |
| GCTATTGATACTGAATTTAC+TGG | 0.295189 | 4.4:-41113013 | MS.gene30526:CDS |
| GTTACGAGGGACCGTTTATA+TGG | 0.321880 | 4.4:-41115524 | MS.gene30526:CDS |
| ATAAAGCGCCGGTAAGTTTC+AGG | 0.332302 | 4.4:+41109434 | None:intergenic |
| AAAATCACAAACTACTGTTA+TGG | 0.340708 | 4.4:-41115438 | MS.gene30526:CDS |
| GATATAGCTGATATTGGAAT+TGG | 0.341403 | 4.4:+41113484 | None:intergenic |
| GTACCTGATATAGCTGATAT+TGG | 0.351402 | 4.4:+41113478 | None:intergenic |
| TCTCTTCGGTTTACTCCTCT+TGG | 0.353029 | 4.4:+41116344 | None:intergenic |
| AGAAGCTTCGCTTACTTGAT+TGG | 0.355390 | 4.4:-41111729 | MS.gene30526:CDS |
| CATTATTTAATCGTCTCGTT+GGG | 0.374320 | 4.4:-41115721 | MS.gene30526:CDS |
| GTTTATTCTACTGCTCTAGC+TGG | 0.375110 | 4.4:-41111697 | MS.gene30526:CDS |
| CAATGAATTACCAGAGGAAT+TGG | 0.376865 | 4.4:-41116644 | MS.gene30526:CDS |
| AGTGTTGTGGAATGAGAAAA+TGG | 0.382241 | 4.4:+41116792 | None:intergenic |
| GTTCCAGCAATTTCAATTGT+TGG | 0.384187 | 4.4:-41113127 | MS.gene30526:CDS |
| CTACCAACAATTGAAATTGC+TGG | 0.387235 | 4.4:+41113124 | None:intergenic |
| TGCTCTTGTCATTGAGGCCA+TGG | 0.390813 | 4.4:-41112052 | MS.gene30526:CDS |
| CCACCTCGTGTCCTGGGAGG+AGG | 0.391395 | 4.4:+41109676 | None:intergenic |
| CTGCGCCACAAAAGCCGAAT+GGG | 0.392579 | 4.4:+41109371 | None:intergenic |
| TTCCATCTTATTGATACTGC+TGG | 0.393997 | 4.4:-41112171 | MS.gene30526:CDS |
| GAAGCTTCGCTTACTTGATT+GGG | 0.397877 | 4.4:-41111728 | MS.gene30526:CDS |
| AACTACTGTTATGGAAGATC+TGG | 0.412261 | 4.4:-41115429 | MS.gene30526:CDS |
| GGAATGAGAAAATGGGAGTT+GGG | 0.414503 | 4.4:+41116800 | None:intergenic |
| TCTTCTTGCAGGCTGCTATA+AGG | 0.414886 | 4.4:-41109499 | MS.gene30526:intron |
| GCTATATCAGGTACTGGAAC+TGG | 0.418100 | 4.4:-41113469 | MS.gene30526:CDS |
| TTCATTGTCGTCAACGGTGC+CGG | 0.420260 | 4.4:+41116660 | None:intergenic |
| AAGAAACAAACCTGGCCATC+TGG | 0.421017 | 4.4:+41112989 | None:intergenic |
| GCATTATTTAATCGTCTCGT+TGG | 0.421033 | 4.4:-41115722 | MS.gene30526:CDS |
| CTACAAAGGATTGCTATTGT+TGG | 0.421904 | 4.4:-41115767 | MS.gene30526:CDS |
| ATTCCAATATCAGCTATATC+AGG | 0.423606 | 4.4:-41113481 | MS.gene30526:CDS |
| TTATTGATACTGCTGGAATC+AGG | 0.432717 | 4.4:-41112164 | MS.gene30526:CDS |
| AATTCACCGGCGCTGAACTT+CGG | 0.437239 | 4.4:+41116685 | None:intergenic |
| CTCAATCATCGATGGCATCC+TGG | 0.439892 | 4.4:+41115346 | None:intergenic |
| CTAGAGAGGCAGCTGTTGCC+AGG | 0.449493 | 4.4:-41115364 | MS.gene30526:CDS |
| GAGAAGTGATGTCAAGGAAT+CGG | 0.455131 | 4.4:-41116376 | MS.gene30526:CDS |
| GCCATCGATGATTGAGAGAC+AGG | 0.458368 | 4.4:-41115339 | MS.gene30526:CDS |
| CATGGCTTGTATCACTGAAC+AGG | 0.463425 | 4.4:-41112034 | MS.gene30526:intron |
| AGAAGTGATGTCAAGGAATC+GGG | 0.466171 | 4.4:-41116375 | MS.gene30526:CDS |
| GCTGAACTTCGGGGCGGAGC+GGG | 0.466486 | 4.4:+41116696 | None:intergenic |
| AGAAGCAAAGGAAGTTGCGC+TGG | 0.467989 | 4.4:-41116542 | MS.gene30526:CDS |
| ACTTCGGGGCGGAGCGGGAA+AGG | 0.468937 | 4.4:+41116701 | None:intergenic |
| CAATTACCTGACCGTCGACC+AGG | 0.469241 | 4.4:+41115279 | None:intergenic |
| AGGACAACTGTAGCCTCAGC+TGG | 0.475841 | 4.4:-41112138 | MS.gene30526:CDS |
| ATCGTGCATTTCGTGCTATT+AGG | 0.481079 | 4.4:-41112089 | MS.gene30526:CDS |
| TCGACCAGGAAAATAATAAC+AGG | 0.484020 | 4.4:+41115293 | None:intergenic |
| GAAAGAATTGAAGTGGGAAA+GGG | 0.484085 | 4.4:+41116766 | None:intergenic |
| TTTATTCTACTGCTCTAGCT+GGG | 0.487113 | 4.4:-41111696 | MS.gene30526:CDS |
| GCAATTGTGGTGGATGAGCC+TGG | 0.491923 | 4.4:-41115548 | MS.gene30526:CDS |
| AGAGCAGTAGAATAAACAAC+TGG | 0.492082 | 4.4:+41111703 | None:intergenic |
| AATGCTGACTTGCCCACGTT+CGG | 0.492438 | 4.4:+41115740 | None:intergenic |
| CGCTGAACTTCGGGGCGGAG+CGG | 0.495822 | 4.4:+41116695 | None:intergenic |
| TTGGGGAGATCACGAGTTCA+TGG | 0.496835 | 4.4:-41115492 | MS.gene30526:CDS |
| TGGAATGAGAAAATGGGAGT+TGG | 0.498532 | 4.4:+41116799 | None:intergenic |
| AATATGATCGGCCATATAAA+CGG | 0.499928 | 4.4:+41115513 | None:intergenic |
| ATATCAGCTATATCAGGTAC+TGG | 0.504906 | 4.4:-41113475 | MS.gene30526:CDS |
| GGGGTGGTGTAGTAAGAGAT+AGG | 0.509089 | 4.4:+41116829 | None:intergenic |
| AAGCAGCTGCGTTCAAATGC+GGG | 0.509783 | 4.4:-41109407 | MS.gene30526:CDS |
| TTCCAGCAGTATCAATAAGA+TGG | 0.510717 | 4.4:+41112169 | None:intergenic |
| GGTAATTCAACCAATTCCTC+TGG | 0.512078 | 4.4:+41116634 | None:intergenic |
| TCACGTGTAGTGCCACTGAT+GGG | 0.516984 | 4.4:+41113037 | None:intergenic |
| TTGACAAAGAACACAAATGT+AGG | 0.519280 | 4.4:+41109473 | None:intergenic |
| AGCTGCCTCTCTAGAGGCAA+GGG | 0.519693 | 4.4:+41115373 | None:intergenic |
| GGTGGTGTAGTAAGAGATAG+GGG | 0.519870 | 4.4:+41116831 | None:intergenic |
| TCTTCTTCAACAAGATTCTG+TGG | 0.521205 | 4.4:+41113157 | None:intergenic |
| AAAGAATTGAAGTGGGAAAG+GGG | 0.521751 | 4.4:+41116767 | None:intergenic |
| CTGATGTGGAGATTGCTGAT+TGG | 0.522257 | 4.4:-41114849 | MS.gene30526:CDS |
| TTCAGCGCCGGTGAATTCTC+CGG | 0.525461 | 4.4:-41116679 | MS.gene30526:CDS |
| AGCGGGAAAGGCAACAGCGA+GGG | 0.527327 | 4.4:+41116713 | None:intergenic |
| ATACTGCTGGAATCAGGAAA+AGG | 0.527410 | 4.4:-41112158 | MS.gene30526:CDS |
| TATTAGTACAACCATCGGTA+TGG | 0.528394 | 4.4:-41115405 | MS.gene30526:CDS |
| TGCCGCTAGTGAAGTCGAAA+AGG | 0.533764 | 4.4:-41109764 | MS.gene30526:CDS |
| AAACGGTCCCTCGTAACTCC+AGG | 0.539185 | 4.4:+41115530 | None:intergenic |
| TTCTGTTGTACTTCCAGCTG+AGG | 0.539256 | 4.4:+41112125 | None:intergenic |
| TCCACGGAAAAGAATTATGC+AGG | 0.541274 | 4.4:-41114770 | MS.gene30526:CDS |
| AGATGAGAGAAGTGATGTCA+AGG | 0.542254 | 4.4:-41116382 | MS.gene30526:CDS |
| TGGGAAAGGGGAGAGTGTTG+TGG | 0.544337 | 4.4:+41116779 | None:intergenic |
| AGATCACGAGTTCATGGTGG+TGG | 0.544692 | 4.4:-41115486 | MS.gene30526:CDS |
| ATCACGTGTAGTGCCACTGA+TGG | 0.547783 | 4.4:+41113036 | None:intergenic |
| TATATTGAATCAAGTAGTGC+GGG | 0.547969 | 4.4:-41109716 | MS.gene30526:CDS |
| GAGTTCATGGTGGTGGACAC+TGG | 0.551168 | 4.4:-41115479 | MS.gene30526:CDS |
| TGTTGTTGCTCTTGTCATTG+AGG | 0.552577 | 4.4:-41112058 | MS.gene30526:CDS |
| TGGTAATTCATTGTCGTCAA+CGG | 0.553028 | 4.4:+41116654 | None:intergenic |
| AACATCAACATCATCGTCAT+CGG | 0.553244 | 4.4:+41116579 | None:intergenic |
| CAGCTGCCTCTCTAGAGGCA+AGG | 0.553340 | 4.4:+41115372 | None:intergenic |
| ATTGTTGGTAGACCAAATGT+TGG | 0.558878 | 4.4:-41113112 | MS.gene30526:CDS |
| ATTTACTGGACCAGATGGCC+AGG | 0.560626 | 4.4:-41112999 | MS.gene30526:intron |
| TTCCTTTCTATAGGGAAACA+AGG | 0.561241 | 4.4:-41115570 | MS.gene30526:intron |
| GCAACAGCGAGGGAGAGAGA+TGG | 0.563129 | 4.4:+41116723 | None:intergenic |
| GAGACAGGCGATTGCAGCTG+TGG | 0.563565 | 4.4:-41115324 | MS.gene30526:CDS |
| TGCGCTCGAGCGAGAAGCAA+AGG | 0.565799 | 4.4:-41116554 | MS.gene30526:CDS |
| GGGTGGTGTAGTAAGAGATA+GGG | 0.566452 | 4.4:+41116830 | None:intergenic |
| TTTGAATGCACTGGTTGGCG+AGG | 0.568037 | 4.4:-41113077 | MS.gene30526:CDS |
| AAGGAGAGATCAAGAAGACT+TGG | 0.568230 | 4.4:-41109745 | MS.gene30526:CDS |
| GGAAAGAATTGAAGTGGGAA+AGG | 0.568891 | 4.4:+41116765 | None:intergenic |
| GCCTGTCTCTCAATCATCGA+TGG | 0.570242 | 4.4:+41115338 | None:intergenic |
| ATAGGGAAACAAGGCAATTG+TGG | 0.571734 | 4.4:-41115561 | MS.gene30526:intron |
| GCTGCGCCACAAAAGCCGAA+TGG | 0.572990 | 4.4:+41109370 | None:intergenic |
| AGGTCTAACAGCAGCTGATG+TGG | 0.573463 | 4.4:-41114863 | MS.gene30526:CDS |
| AACGGTGCCGGAGAATTCAC+CGG | 0.573499 | 4.4:+41116672 | None:intergenic |
| TCCGCCCCGAAGTTCAGCGC+CGG | 0.579373 | 4.4:-41116691 | MS.gene30526:CDS |
| TATTGTTGGAAGACCGAACG+TGG | 0.580902 | 4.4:-41115753 | MS.gene30526:CDS |
| CGTGATCTCCCCAATATGAT+CGG | 0.582664 | 4.4:+41115501 | None:intergenic |
| TTCAGGATTACAGAAAGTTG+AGG | 0.585477 | 4.4:-41113425 | MS.gene30526:intron |
| GCTGCTTCTCCATAAAGCGC+CGG | 0.593937 | 4.4:+41109423 | None:intergenic |
| ACTGAATTTACTGGACCAGA+TGG | 0.596187 | 4.4:-41113004 | MS.gene30526:CDS |
| AGTACAACCATCGGTATGGA+TGG | 0.602800 | 4.4:-41115401 | MS.gene30526:CDS |
| GTGTTGTGGAATGAGAAAAT+GGG | 0.605667 | 4.4:+41116793 | None:intergenic |
| GAATGAGAAAATGGGAGTTG+GGG | 0.606189 | 4.4:+41116801 | None:intergenic |
| TGCGCCACAAAAGCCGAATG+GGG | 0.608074 | 4.4:+41109372 | None:intergenic |
| TCCCTGATAATCTTCTACAA+AGG | 0.609117 | 4.4:-41115781 | MS.gene30526:CDS |
| GTGTAGTAAGAGATAGGGGT+GGG | 0.611661 | 4.4:+41116835 | None:intergenic |
| TTCACCGGCGCTGAACTTCG+GGG | 0.612669 | 4.4:+41116687 | None:intergenic |
| GGCAACAGCTGCCTCTCTAG+AGG | 0.612746 | 4.4:+41115367 | None:intergenic |
| GAGCGGGAAAGGCAACAGCG+AGG | 0.612952 | 4.4:+41116712 | None:intergenic |
| GAAGCAGCTGCGTTCAAATG+CGG | 0.613645 | 4.4:-41109408 | MS.gene30526:CDS |
| TTATATGGCCGATCATATTG+GGG | 0.614014 | 4.4:-41115509 | MS.gene30526:CDS |
| ATTATTTAATCGTCTCGTTG+GGG | 0.616931 | 4.4:-41115720 | MS.gene30526:intron |
| TTAACAAGTGCGAATCTCCA+CGG | 0.620781 | 4.4:-41114786 | MS.gene30526:CDS |
| GGGAAACAAGGCAATTGTGG+TGG | 0.621300 | 4.4:-41115558 | MS.gene30526:CDS |
| CTATATTGAATCAAGTAGTG+CGG | 0.622529 | 4.4:-41109717 | MS.gene30526:CDS |
| AAGCCTCCTCCCAGGACACG+AGG | 0.622603 | 4.4:-41109679 | MS.gene30526:CDS |
| GTGTGATCGTTGTAAACAAG+TGG | 0.623122 | 4.4:-41111810 | MS.gene30526:CDS |
| TCTGTAATCCTGAACAAACA+AGG | 0.626305 | 4.4:+41113434 | None:intergenic |
| CTGGATATTAGTACAACCAT+CGG | 0.631405 | 4.4:-41115410 | MS.gene30526:CDS |
| TCCTTTGTAGAAGATTATCA+GGG | 0.633167 | 4.4:+41115780 | None:intergenic |
| TTTCCACCTCGTGTCCTGGG+AGG | 0.635703 | 4.4:+41109673 | None:intergenic |
| CTGTTCAGTGATACAAGCCA+TGG | 0.639138 | 4.4:+41112035 | None:intergenic |
| CCTCCTCCCAGGACACGAGG+TGG | 0.641204 | 4.4:-41109676 | MS.gene30526:CDS |
| TATTCCCCTTGCCTCTAGAG+AGG | 0.646020 | 4.4:-41115378 | MS.gene30526:CDS |
| GCGTGTTTACTATTGCACTC+AGG | 0.647063 | 4.4:-41109644 | MS.gene30526:intron |
| AGGACTACAAGATAGCTGAA+AGG | 0.648241 | 4.4:-41111855 | MS.gene30526:CDS |
| GGGAATACCATCCATACCGA+TGG | 0.648577 | 4.4:+41115394 | None:intergenic |
| ACAATAGTCAGCCCCATCAG+TGG | 0.654353 | 4.4:-41113049 | MS.gene30526:CDS |
| GCGCCACAAAAGCCGAATGG+GGG | 0.663468 | 4.4:+41109373 | None:intergenic |
| GGATGAGCCTGGAGTTACGA+GGG | 0.666716 | 4.4:-41115537 | MS.gene30526:CDS |
| AATGACAAGAGCAACAACAT+CGG | 0.667782 | 4.4:+41112062 | None:intergenic |
| GGAATTGGTTGAATTACCAG+AGG | 0.667978 | 4.4:-41116629 | MS.gene30526:CDS |
| TGGATGAGCCTGGAGTTACG+AGG | 0.670954 | 4.4:-41115538 | MS.gene30526:CDS |
| GCTGCCTCTCTAGAGGCAAG+GGG | 0.673323 | 4.4:+41115374 | None:intergenic |
| TGTGATCGTTGTAAACAAGT+GGG | 0.679644 | 4.4:-41111809 | MS.gene30526:CDS |
| AAGTGAGAAAGAAATGCCAT+TGG | 0.684430 | 4.4:+41116865 | None:intergenic |
| CACGTGTAGTGCCACTGATG+GGG | 0.686204 | 4.4:+41113038 | None:intergenic |
| GGTGTAGTAAGAGATAGGGG+TGG | 0.690143 | 4.4:+41116834 | None:intergenic |
| ACCGGCGCTGAACTTCGGGG+CGG | 0.695383 | 4.4:+41116690 | None:intergenic |
| ACAAAGAACACAAATGTAGG+CGG | 0.698786 | 4.4:+41109476 | None:intergenic |
| TTCATGGTGGTGGACACTGG+TGG | 0.712206 | 4.4:-41115476 | MS.gene30526:CDS |
| TGACGACAATGAATTACCAG+AGG | 0.728995 | 4.4:-41116650 | MS.gene30526:CDS |
| GGGAGATCACGAGTTCATGG+TGG | 0.734365 | 4.4:-41115489 | MS.gene30526:CDS |
| ATTGTTGGAAGACCGAACGT+GGG | 0.743826 | 4.4:-41115752 | MS.gene30526:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 41109328 | 41116884 | 41109328 | ID=MS.gene30526 |
| chr4.4 | mRNA | 41109328 | 41116884 | 41109328 | ID=MS.gene30526.t1;Parent=MS.gene30526 |
| chr4.4 | exon | 41116506 | 41116884 | 41116506 | ID=MS.gene30526.t1.exon1;Parent=MS.gene30526.t1 |
| chr4.4 | CDS | 41116506 | 41116884 | 41116506 | ID=cds.MS.gene30526.t1;Parent=MS.gene30526.t1 |
| chr4.4 | exon | 41116338 | 41116405 | 41116338 | ID=MS.gene30526.t1.exon2;Parent=MS.gene30526.t1 |
| chr4.4 | CDS | 41116338 | 41116405 | 41116338 | ID=cds.MS.gene30526.t1;Parent=MS.gene30526.t1 |
| chr4.4 | exon | 41115721 | 41115804 | 41115721 | ID=MS.gene30526.t1.exon3;Parent=MS.gene30526.t1 |
| chr4.4 | CDS | 41115721 | 41115804 | 41115721 | ID=cds.MS.gene30526.t1;Parent=MS.gene30526.t1 |
| chr4.4 | exon | 41115286 | 41115579 | 41115286 | ID=MS.gene30526.t1.exon4;Parent=MS.gene30526.t1 |
| chr4.4 | CDS | 41115286 | 41115579 | 41115286 | ID=cds.MS.gene30526.t1;Parent=MS.gene30526.t1 |
| chr4.4 | exon | 41114748 | 41114887 | 41114748 | ID=MS.gene30526.t1.exon5;Parent=MS.gene30526.t1 |
| chr4.4 | CDS | 41114748 | 41114887 | 41114748 | ID=cds.MS.gene30526.t1;Parent=MS.gene30526.t1 |
| chr4.4 | exon | 41113426 | 41113513 | 41113426 | ID=MS.gene30526.t1.exon6;Parent=MS.gene30526.t1 |
| chr4.4 | CDS | 41113426 | 41113513 | 41113426 | ID=cds.MS.gene30526.t1;Parent=MS.gene30526.t1 |
| chr4.4 | exon | 41113000 | 41113182 | 41113000 | ID=MS.gene30526.t1.exon7;Parent=MS.gene30526.t1 |
| chr4.4 | CDS | 41113000 | 41113182 | 41113000 | ID=cds.MS.gene30526.t1;Parent=MS.gene30526.t1 |
| chr4.4 | exon | 41112035 | 41112196 | 41112035 | ID=MS.gene30526.t1.exon8;Parent=MS.gene30526.t1 |
| chr4.4 | CDS | 41112035 | 41112196 | 41112035 | ID=cds.MS.gene30526.t1;Parent=MS.gene30526.t1 |
| chr4.4 | exon | 41111682 | 41111875 | 41111682 | ID=MS.gene30526.t1.exon9;Parent=MS.gene30526.t1 |
| chr4.4 | CDS | 41111682 | 41111875 | 41111682 | ID=cds.MS.gene30526.t1;Parent=MS.gene30526.t1 |
| chr4.4 | exon | 41109645 | 41109795 | 41109645 | ID=MS.gene30526.t1.exon10;Parent=MS.gene30526.t1 |
| chr4.4 | CDS | 41109645 | 41109795 | 41109645 | ID=cds.MS.gene30526.t1;Parent=MS.gene30526.t1 |
| chr4.4 | exon | 41109328 | 41109510 | 41109328 | ID=MS.gene30526.t1.exon11;Parent=MS.gene30526.t1 |
| chr4.4 | CDS | 41109328 | 41109510 | 41109328 | ID=cds.MS.gene30526.t1;Parent=MS.gene30526.t1 |
| Gene Sequence |
| Protein sequence |
