Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31842.t1 | XP_024631264.1 | 97.8 | 646 | 14 | 0 | 1 | 646 | 1 | 646 | 0.00E+00 | 1344.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31842.t1 | Q8W4A7 | 68.1 | 626 | 162 | 9 | 4 | 623 | 3 | 596 | 5.3e-257 | 888.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31842.t1 | A0A396JHX9 | 97.8 | 646 | 14 | 0 | 1 | 646 | 1 | 646 | 0.0e+00 | 1344.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene31842 | MS.gene30980 | PPI |
MS.gene31842 | MS.gene06426 | PPI |
MS.gene013329 | MS.gene31842 | PPI |
MS.gene31842 | MS.gene049302 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31842.t1 | MTR_1g029130 | 97.608 | 627 | 15 | 0 | 20 | 646 | 1 | 627 | 0.0 | 1282 |
MS.gene31842.t1 | MTR_3g095910 | 65.224 | 647 | 211 | 6 | 1 | 646 | 4 | 637 | 0.0 | 874 |
MS.gene31842.t1 | MTR_1g019540 | 48.454 | 485 | 228 | 7 | 135 | 601 | 55 | 535 | 1.89e-167 | 489 |
MS.gene31842.t1 | MTR_1g019540 | 48.454 | 485 | 228 | 7 | 135 | 601 | 108 | 588 | 5.87e-167 | 490 |
MS.gene31842.t1 | MTR_1g019530 | 47.390 | 479 | 236 | 7 | 135 | 601 | 110 | 584 | 7.93e-157 | 464 |
MS.gene31842.t1 | MTR_1g082880 | 42.278 | 518 | 252 | 10 | 113 | 603 | 53 | 550 | 2.39e-137 | 413 |
MS.gene31842.t1 | MTR_7g113610 | 40.196 | 510 | 264 | 9 | 122 | 601 | 57 | 555 | 4.60e-133 | 402 |
MS.gene31842.t1 | MTR_1g080460 | 36.000 | 175 | 106 | 5 | 304 | 475 | 16 | 187 | 3.41e-28 | 119 |
MS.gene31842.t1 | MTR_7g115460 | 35.758 | 165 | 101 | 4 | 313 | 475 | 35 | 196 | 9.83e-27 | 115 |
MS.gene31842.t1 | MTR_1g084670 | 26.923 | 260 | 134 | 9 | 309 | 524 | 18 | 265 | 7.65e-17 | 82.4 |
MS.gene31842.t1 | MTR_1g084670 | 26.407 | 231 | 129 | 6 | 307 | 496 | 16 | 246 | 6.24e-16 | 79.0 |
MS.gene31842.t1 | MTR_1g084670 | 32.500 | 120 | 78 | 1 | 307 | 423 | 16 | 135 | 1.10e-15 | 77.4 |
MS.gene31842.t1 | MTR_7g109920 | 26.459 | 257 | 133 | 8 | 312 | 524 | 24 | 268 | 1.44e-15 | 79.0 |
MS.gene31842.t1 | MTR_4g132185 | 25.854 | 205 | 113 | 3 | 309 | 474 | 19 | 223 | 2.46e-15 | 77.8 |
MS.gene31842.t1 | MTR_7g109920 | 26.238 | 202 | 110 | 3 | 312 | 474 | 24 | 225 | 2.86e-15 | 77.0 |
MS.gene31842.t1 | MTR_7g111850 | 24.016 | 254 | 139 | 7 | 314 | 524 | 26 | 268 | 5.30e-14 | 73.9 |
MS.gene31842.t1 | MTR_1g084660 | 26.459 | 257 | 126 | 9 | 309 | 524 | 18 | 252 | 2.76e-13 | 71.6 |
MS.gene31842.t1 | MTR_1g084660 | 25.385 | 260 | 133 | 8 | 307 | 527 | 16 | 253 | 2.35e-12 | 68.2 |
MS.gene31842.t1 | MTR_4g100950 | 25.000 | 176 | 117 | 5 | 311 | 474 | 36 | 208 | 9.67e-12 | 68.2 |
MS.gene31842.t1 | MTR_5g012590 | 25.568 | 176 | 116 | 5 | 311 | 474 | 38 | 210 | 2.48e-11 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene31842.t1 | AT1G77130 | 68.109 | 624 | 161 | 9 | 4 | 621 | 3 | 594 | 0.0 | 876 |
MS.gene31842.t1 | AT3G18660 | 60.870 | 644 | 216 | 8 | 10 | 636 | 17 | 641 | 0.0 | 783 |
MS.gene31842.t1 | AT3G18660 | 60.870 | 644 | 215 | 8 | 10 | 636 | 17 | 640 | 0.0 | 783 |
MS.gene31842.t1 | AT3G18660 | 60.896 | 647 | 215 | 9 | 10 | 636 | 17 | 645 | 0.0 | 780 |
MS.gene31842.t1 | AT4G33330 | 49.281 | 487 | 228 | 5 | 135 | 606 | 43 | 525 | 2.34e-170 | 496 |
MS.gene31842.t1 | AT4G33330 | 49.281 | 487 | 228 | 5 | 135 | 606 | 111 | 593 | 2.37e-169 | 496 |
MS.gene31842.t1 | AT4G33330 | 49.281 | 487 | 228 | 5 | 135 | 606 | 122 | 604 | 2.76e-169 | 497 |
MS.gene31842.t1 | AT4G33330 | 49.793 | 482 | 223 | 5 | 135 | 601 | 111 | 588 | 6.12e-169 | 496 |
MS.gene31842.t1 | AT1G08990 | 45.825 | 491 | 236 | 9 | 135 | 603 | 79 | 561 | 4.41e-144 | 431 |
MS.gene31842.t1 | AT1G54940 | 43.381 | 491 | 240 | 10 | 135 | 601 | 74 | 550 | 9.60e-138 | 414 |
MS.gene31842.t1 | AT4G33330 | 48.138 | 349 | 163 | 4 | 135 | 468 | 122 | 467 | 7.41e-107 | 331 |
MS.gene31842.t1 | AT5G18480 | 37.222 | 180 | 107 | 5 | 297 | 474 | 16 | 191 | 9.30e-31 | 127 |
MS.gene31842.t1 | AT1G60470 | 27.138 | 269 | 135 | 8 | 305 | 524 | 11 | 267 | 1.25e-17 | 85.1 |
MS.gene31842.t1 | AT4G26250 | 26.296 | 270 | 143 | 8 | 299 | 524 | 12 | 269 | 1.61e-17 | 84.7 |
MS.gene31842.t1 | AT1G09350 | 27.519 | 258 | 130 | 8 | 312 | 524 | 15 | 260 | 2.45e-17 | 84.3 |
MS.gene31842.t1 | AT1G56600 | 25.623 | 281 | 147 | 9 | 289 | 524 | 3 | 266 | 6.84e-17 | 82.8 |
MS.gene31842.t1 | AT1G60450 | 26.794 | 209 | 112 | 4 | 307 | 474 | 13 | 221 | 1.41e-15 | 79.0 |
MS.gene31842.t1 | AT2G47180 | 23.077 | 299 | 169 | 9 | 302 | 556 | 19 | 300 | 8.69e-15 | 76.6 |
MS.gene31842.t1 | AT5G30500 | 25.000 | 200 | 110 | 3 | 312 | 471 | 24 | 223 | 1.40e-14 | 74.3 |
MS.gene31842.t1 | AT5G30500 | 25.269 | 186 | 99 | 3 | 312 | 457 | 24 | 209 | 3.12e-13 | 71.6 |
MS.gene31842.t1 | AT5G23790 | 22.006 | 309 | 180 | 9 | 307 | 571 | 16 | 307 | 3.73e-12 | 68.6 |
MS.gene31842.t1 | AT2G35710 | 26.966 | 178 | 113 | 6 | 311 | 475 | 61 | 234 | 1.29e-11 | 66.6 |
MS.gene31842.t1 | AT2G35710 | 26.966 | 178 | 113 | 6 | 311 | 475 | 61 | 234 | 9.33e-11 | 65.1 |
Find 144 sgRNAs with CRISPR-Local
Find 372 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAACTTCTTGAAACATTTC+TGG | 0.133286 | 1.1:+14638550 | MS.gene31842:CDS |
ATTGCTGTAGTTTCCTTTCT+TGG | 0.140768 | 1.1:-14638847 | None:intergenic |
GCCGAATTGGAAAATTATTT+TGG | 0.148185 | 1.1:+14636272 | MS.gene31842:CDS |
TATGCTTCTGGTTCTGCTTT+TGG | 0.153956 | 1.1:-14638228 | None:intergenic |
TTTCAAGAACATTAGTTATT+TGG | 0.160948 | 1.1:-14636675 | None:intergenic |
TTTCCTATGGCTGATATTTC+AGG | 0.192514 | 1.1:-14638366 | None:intergenic |
TTGCACATTTCAACTACTTA+TGG | 0.215615 | 1.1:+14638437 | MS.gene31842:CDS |
TCTTCTTCATCTATCCATTC+TGG | 0.242049 | 1.1:-14636850 | None:intergenic |
TGACGTGGCTCAACGGTGTT+AGG | 0.251716 | 1.1:-14633257 | None:intergenic |
TTCAAGAAGTTCATGTGTTT+TGG | 0.260706 | 1.1:-14638540 | None:intergenic |
TTCCACTCGTTATATGCTTC+TGG | 0.267699 | 1.1:-14638240 | None:intergenic |
TCCTTGCAAGTAAAGAGATT+TGG | 0.288240 | 1.1:-14637093 | None:intergenic |
GCGACGAAAACTCGTCTCTT+TGG | 0.290093 | 1.1:+14638597 | MS.gene31842:CDS |
TCCTGATTCTTTGAATTGTA+TGG | 0.290849 | 1.1:-14638203 | None:intergenic |
GGAGAGTATGTTATGGCATT+GGG | 0.309950 | 1.1:+14638935 | MS.gene31842:CDS |
GGCATTGGGGTGACAAGAAT+TGG | 0.313543 | 1.1:+14638949 | MS.gene31842:CDS |
GAAGGATAAGGACACATATC+AGG | 0.317828 | 1.1:+14636702 | MS.gene31842:CDS |
TGCAATTTATACTCCTATCT+TGG | 0.320523 | 1.1:-14636248 | None:intergenic |
GATTATCAACTTCTTCATTC+AGG | 0.320645 | 1.1:+14633282 | MS.gene31842:CDS |
AACGCGTGATCTCGTGATTC+TGG | 0.330372 | 1.1:+14638122 | MS.gene31842:CDS |
TCCGAGATTACGACTGCAAC+TGG | 0.347243 | 1.1:+14638679 | MS.gene31842:CDS |
AAGTAAAGAGATTTGGAATT+GGG | 0.351966 | 1.1:-14637086 | None:intergenic |
AGGCGACGAGGATGAGAAAA+AGG | 0.356243 | 1.1:+14638575 | MS.gene31842:CDS |
CAAGTAAAGAGATTTGGAAT+TGG | 0.363595 | 1.1:-14637087 | None:intergenic |
TCCATACAATTCAAAGAATC+AGG | 0.366674 | 1.1:+14638202 | MS.gene31842:CDS |
GTATAAATTGCAAGCCGAAT+TGG | 0.369269 | 1.1:+14636259 | MS.gene31842:CDS |
AGGACTACATGCTCAGCTTC+TGG | 0.371387 | 1.1:-14636781 | None:intergenic |
TCTTGAAAATTTGAAGGATA+AGG | 0.375525 | 1.1:+14636690 | MS.gene31842:CDS |
CTCTCTGAGTTTATGCAGGT+CGG | 0.379464 | 1.1:-14637154 | None:intergenic |
TAATGTTCTTGAAAATTTGA+AGG | 0.384534 | 1.1:+14636684 | MS.gene31842:CDS |
AAGCTTCCCTGCGACAAGTC+AGG | 0.395485 | 1.1:+14636952 | MS.gene31842:CDS |
TGAACTATCAGTTCCTTTGA+AGG | 0.396557 | 1.1:+14637203 | MS.gene31842:CDS |
CTTTATGTCATCCACTATCT+AGG | 0.402882 | 1.1:+14638636 | MS.gene31842:CDS |
TTTCCTGGTGCCTGAATCCT+AGG | 0.405848 | 1.1:-14636904 | None:intergenic |
CACATGAACCAATAGGTAAC+TGG | 0.406938 | 1.1:-14637182 | None:intergenic |
GAGAAGCTCCAGTTACCTAT+TGG | 0.407327 | 1.1:+14637174 | MS.gene31842:CDS |
TCCAACACTACCTAGGATTC+AGG | 0.408343 | 1.1:+14636894 | MS.gene31842:CDS |
GGGAGAGTATGTTATGGCAT+TGG | 0.410396 | 1.1:+14638934 | MS.gene31842:CDS |
AGGAGTGGCTTGGCAGCAGC+TGG | 0.412642 | 1.1:+14638171 | MS.gene31842:CDS |
CACATATTCCATTCCAAGAT+AGG | 0.413633 | 1.1:+14636235 | MS.gene31842:CDS |
GTCTTGCTGCTTCAATCTGC+AGG | 0.421473 | 1.1:-14637005 | None:intergenic |
ATATTTCAGGCATCTCAAAA+AGG | 0.428904 | 1.1:-14638353 | None:intergenic |
GAACTTCTTGAAACATTTCT+GGG | 0.433094 | 1.1:+14638551 | MS.gene31842:CDS |
GTTTCTGGGAGAGTATGTTA+TGG | 0.438372 | 1.1:+14638928 | MS.gene31842:CDS |
ATCCTACAATGGTGGTGACC+AGG | 0.447256 | 1.1:+14638479 | MS.gene31842:CDS |
GCGTTTGAAAACGTGCTTTG+AGG | 0.447428 | 1.1:+14638899 | MS.gene31842:CDS |
ATTACAGCAAATTTCGTCTC+TGG | 0.450343 | 1.1:+14638262 | MS.gene31842:CDS |
GGATTGTTGCATAAGCTTCT+CGG | 0.451047 | 1.1:-14638032 | None:intergenic |
TCAGTTCCTTTGAAGGCTAA+AGG | 0.454613 | 1.1:+14637210 | MS.gene31842:CDS |
GATAGTTCACATGAACCAAT+AGG | 0.459168 | 1.1:-14637189 | None:intergenic |
GCTCAAAGTATTCGAATGTC+TGG | 0.460744 | 1.1:+14638096 | MS.gene31842:CDS |
GACGTGGCTCAACGGTGTTA+GGG | 0.461218 | 1.1:-14633256 | None:intergenic |
CTAGATAGTGGATGACATAA+AGG | 0.461375 | 1.1:-14638635 | None:intergenic |
TGAATGAAGAAGTTGATAAT+CGG | 0.465528 | 1.1:-14633280 | None:intergenic |
TGCAGAAGTTCTGTTTGCTT+AGG | 0.469003 | 1.1:+14638784 | MS.gene31842:CDS |
TCCAAATCTCTTTACTTGCA+AGG | 0.470250 | 1.1:+14637092 | MS.gene31842:CDS |
TGCAGCGTGACGGGAATGCC+TGG | 0.473934 | 1.1:+14637121 | MS.gene31842:CDS |
AGACTTGCTGCGACTTCCAA+AGG | 0.473992 | 1.1:+14637024 | MS.gene31842:CDS |
TGTTACTAGAAGCATAGTTC+AGG | 0.483810 | 1.1:-14636807 | None:intergenic |
TCTGCACATATATATGTTTG+TGG | 0.485140 | 1.1:+14638060 | MS.gene31842:CDS |
TCTCTGAGTTTATGCAGGTC+GGG | 0.486148 | 1.1:-14637153 | None:intergenic |
AGGATATTATGCAGCGTGAC+GGG | 0.490590 | 1.1:+14637112 | MS.gene31842:CDS |
GTTAGAGTGGGATCGTAGAC+AGG | 0.496234 | 1.1:+14638824 | MS.gene31842:CDS |
CATATATATGTGCAGAGTGC+AGG | 0.498763 | 1.1:-14638053 | None:intergenic |
GGCTCAACGGTGTTAGGGGT+GGG | 0.500757 | 1.1:-14633251 | None:intergenic |
CCAGCGCCCTGACTTGTCGC+AGG | 0.504978 | 1.1:-14636959 | None:intergenic |
ATGTAGCTCATGCGAGGTGG+TGG | 0.505348 | 1.1:+14638733 | MS.gene31842:CDS |
ATGCTTCTAGTAACATCACT+TGG | 0.506425 | 1.1:+14636815 | MS.gene31842:CDS |
GAAACTACAGCAATGGTCAC+TGG | 0.506581 | 1.1:+14638856 | MS.gene31842:CDS |
CAGTGTAGCATTGTTTCCTA+TGG | 0.507446 | 1.1:-14638379 | None:intergenic |
TGGCTCAACGGTGTTAGGGG+TGG | 0.508596 | 1.1:-14633252 | None:intergenic |
TGATCAGTATTATAAACTGC+TGG | 0.510064 | 1.1:-14636336 | None:intergenic |
TTTATACTCCTATCTTGGAA+TGG | 0.510475 | 1.1:-14636243 | None:intergenic |
ACTGTTCAACTCAGGTGTAA+TGG | 0.513305 | 1.1:+14638398 | MS.gene31842:CDS |
ACCCTGGTCACCACCATTGT+AGG | 0.514384 | 1.1:-14638481 | None:intergenic |
ATGCACTGGATGAAACCCTT+TGG | 0.516067 | 1.1:-14637040 | None:intergenic |
GCTTCTCTCTGAGTTTATGC+AGG | 0.516546 | 1.1:-14637158 | None:intergenic |
AATACTTTGAGCTGCGGTGA+TGG | 0.520044 | 1.1:-14638085 | None:intergenic |
TTCTTGAAACATTTCTGGGA+AGG | 0.522014 | 1.1:+14638555 | MS.gene31842:CDS |
TCCAGTTGCAGTCGTAATCT+CGG | 0.522527 | 1.1:-14638680 | None:intergenic |
AGCAGAAGGCAGCGTTAGAG+TGG | 0.527478 | 1.1:+14638811 | MS.gene31842:CDS |
GACTTGCTGCGACTTCCAAA+GGG | 0.531841 | 1.1:+14637025 | MS.gene31842:CDS |
TCCTGACCTTTAGCCTTCAA+AGG | 0.531986 | 1.1:-14637216 | None:intergenic |
AGCTTCCCTGCGACAAGTCA+GGG | 0.533888 | 1.1:+14636953 | MS.gene31842:CDS |
GTGGCTTGGCAGCAGCTGGA+TGG | 0.534926 | 1.1:+14638175 | MS.gene31842:CDS |
CTACTTGTCCAACACTACCT+AGG | 0.544561 | 1.1:+14636887 | MS.gene31842:CDS |
GCCTGAATCCTAGGTAGTGT+TGG | 0.546134 | 1.1:-14636895 | None:intergenic |
CCTGCGACAAGTCAGGGCGC+TGG | 0.547118 | 1.1:+14636959 | MS.gene31842:CDS |
TGATTATCACAGGAGTGGCT+TGG | 0.547142 | 1.1:+14638161 | MS.gene31842:CDS |
TGGATGACATAAAGGATTGG+TGG | 0.547445 | 1.1:-14638627 | None:intergenic |
TATTATAAACTGCTGGAGGA+TGG | 0.547827 | 1.1:-14636329 | None:intergenic |
CTGGAACGTGGACATTCTGC+AGG | 0.550039 | 1.1:+14638698 | MS.gene31842:CDS |
GATCGTAGACAGGCCAAGAA+AGG | 0.550520 | 1.1:+14638834 | MS.gene31842:CDS |
CGATATTTCTGAGTATAAGA+AGG | 0.553853 | 1.1:-14638326 | None:intergenic |
TTCCTGTCGTTTACATATGT+AGG | 0.555071 | 1.1:-14636595 | None:intergenic |
AAACAATAAGTGATTATCAC+AGG | 0.557166 | 1.1:+14638151 | MS.gene31842:CDS |
CTAGGTAGTGTTGGACAAGT+AGG | 0.557193 | 1.1:-14636886 | None:intergenic |
ATGGTTTAGTACCTAGATAG+TGG | 0.565355 | 1.1:-14638647 | None:intergenic |
AAGGACACATATCAGGGTGT+TGG | 0.565940 | 1.1:+14636709 | MS.gene31842:CDS |
GGCCTACATATGTAAACGAC+AGG | 0.567340 | 1.1:+14636593 | MS.gene31842:intron |
GTCACGAAAAGTACATGCAC+TGG | 0.569264 | 1.1:-14637054 | None:intergenic |
AGTTGAAATGTGCAATTCGA+TGG | 0.571909 | 1.1:-14638429 | None:intergenic |
CAGGTCGGGTTCATAAAGCC+AGG | 0.574180 | 1.1:-14637139 | None:intergenic |
TAATCGGTGACGTGGCTCAA+CGG | 0.574534 | 1.1:-14633264 | None:intergenic |
AGCTCATGCGAGGTGGTGGA+AGG | 0.575417 | 1.1:+14638737 | MS.gene31842:CDS |
TTTGCTTAGGTCGAAGCAGA+AGG | 0.575458 | 1.1:+14638797 | MS.gene31842:CDS |
ACGTGGCTCAACGGTGTTAG+GGG | 0.578176 | 1.1:-14633255 | None:intergenic |
TCCTACAATGGTGGTGACCA+GGG | 0.581119 | 1.1:+14638480 | MS.gene31842:CDS |
ATGCCTGAAATATCAGCCAT+AGG | 0.584336 | 1.1:+14638363 | MS.gene31842:CDS |
GGGAAGACTTGTATCCAGAA+TGG | 0.585294 | 1.1:+14636836 | MS.gene31842:CDS |
AGGATGGAAAATTGTAAGCA+AGG | 0.589153 | 1.1:-14636313 | None:intergenic |
ACATATGTAAACGACAGGAA+TGG | 0.596076 | 1.1:+14636598 | MS.gene31842:CDS |
CAGCGCCCTGACTTGTCGCA+GGG | 0.596806 | 1.1:-14636958 | None:intergenic |
CTACCTAGGATTCAGGCACC+AGG | 0.597753 | 1.1:+14636901 | MS.gene31842:CDS |
AAGGATATTATGCAGCGTGA+CGG | 0.600793 | 1.1:+14637111 | MS.gene31842:CDS |
TAGTGGATGACATAAAGGAT+TGG | 0.601872 | 1.1:-14638630 | None:intergenic |
AATGAGATTGTATCCTACAA+TGG | 0.606182 | 1.1:+14638468 | MS.gene31842:CDS |
AAATTTCATTTAGATAACCC+TGG | 0.606443 | 1.1:-14638497 | None:intergenic |
GCAGAAGGCAGCGTTAGAGT+GGG | 0.609692 | 1.1:+14638812 | MS.gene31842:CDS |
ATATATCAAACTCTATATCA+CGG | 0.621311 | 1.1:+14636358 | MS.gene31842:CDS |
ATGAAAGTGAGATTGACCAC+TGG | 0.622446 | 1.1:+14636746 | MS.gene31842:CDS |
AACCAGAAGCATATAACGAG+TGG | 0.623151 | 1.1:+14638238 | MS.gene31842:CDS |
TGACTTGATTCGAAGATGAG+GGG | 0.623649 | 1.1:+14633227 | None:intergenic |
CTGGTACTAGCTGCTTCCAG+TGG | 0.625456 | 1.1:-14636762 | None:intergenic |
AAGAAAGGAAACTACAGCAA+TGG | 0.626082 | 1.1:+14638849 | MS.gene31842:CDS |
CATTCGAATACTTTGAGCTG+CGG | 0.628095 | 1.1:-14638091 | None:intergenic |
ATTTCTGAGTATAAGAAGGT+CGG | 0.628917 | 1.1:-14638322 | None:intergenic |
TAGAAGCATAGTTCAGGCGA+AGG | 0.629094 | 1.1:-14636801 | None:intergenic |
AAGGATAAGGACACATATCA+GGG | 0.632162 | 1.1:+14636703 | MS.gene31842:CDS |
TGCTTCTAGTAACATCACTT+GGG | 0.638241 | 1.1:+14636816 | MS.gene31842:CDS |
AATGCTACACTGTTCAACTC+AGG | 0.645973 | 1.1:+14638390 | MS.gene31842:CDS |
GAGAGTATGTTATGGCATTG+GGG | 0.651503 | 1.1:+14638936 | MS.gene31842:CDS |
TAATCTCGGAAACAAAGCCA+TGG | 0.656479 | 1.1:-14638666 | None:intergenic |
ACATTTCTGGGAAGGCGACG+AGG | 0.659097 | 1.1:+14638563 | MS.gene31842:CDS |
TTACGACTGCAACTGGAACG+TGG | 0.659215 | 1.1:+14638686 | MS.gene31842:CDS |
ACTATCTAGGTACTAAACCA+TGG | 0.660025 | 1.1:+14638649 | MS.gene31842:CDS |
CGAGCAATGTAGCTCATGCG+AGG | 0.661213 | 1.1:+14638727 | MS.gene31842:CDS |
ATAAGTGATTATCACAGGAG+TGG | 0.662338 | 1.1:+14638156 | MS.gene31842:CDS |
TCAGTATTATAAACTGCTGG+AGG | 0.663878 | 1.1:-14636333 | None:intergenic |
GAAGTTGATAATCGGTGACG+TGG | 0.670744 | 1.1:-14633272 | None:intergenic |
GCAATGTAGCTCATGCGAGG+TGG | 0.689730 | 1.1:+14638730 | MS.gene31842:CDS |
GTTCAACTCAGGTGTAATGG+TGG | 0.709097 | 1.1:+14638401 | MS.gene31842:CDS |
GAGATTGTATCCTACAATGG+TGG | 0.728088 | 1.1:+14638471 | MS.gene31842:CDS |
ACAGCAATAAGATCAAGACG+TGG | 0.768801 | 1.1:-14636928 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GTTTAATTTTTTTTCTTATT+TGG | + | chr1.1:14633353-14633372 | MS.gene31842:intron | 10.0% |
!!! | TGTTTAATTTTCATTTTTTT+TGG | + | chr1.1:14634193-14634212 | MS.gene31842:intron | 10.0% |
!!! | TTTTCATTTATGTATAAATT+TGG | + | chr1.1:14635605-14635624 | MS.gene31842:intron | 10.0% |
!! | ATTCAATTATATATTTGAAG+AGG | + | chr1.1:14635843-14635862 | MS.gene31842:intron | 15.0% |
!! | CAACAATAAACATAAAAATT+GGG | - | chr1.1:14635023-14635042 | None:intergenic | 15.0% |
!! | TATATGGATATTTATTCTTT+GGG | + | chr1.1:14636565-14636584 | MS.gene31842:intron | 15.0% |
!! | TATTTGTATATTTCTCAATT+TGG | + | chr1.1:14633380-14633399 | MS.gene31842:intron | 15.0% |
!! | TCAACAATAAACATAAAAAT+TGG | - | chr1.1:14635024-14635043 | None:intergenic | 15.0% |
!! | TTATATGGATATTTATTCTT+TGG | + | chr1.1:14636564-14636583 | MS.gene31842:intron | 15.0% |
!! | TTGAGTGTAAAATTAAATTA+AGG | + | chr1.1:14633943-14633962 | MS.gene31842:intron | 15.0% |
!!! | AAAATTAATTTTGACATCTT+TGG | - | chr1.1:14634034-14634053 | None:intergenic | 15.0% |
!!! | ATTTTGGTTATTATTATCTT+GGG | + | chr1.1:14636288-14636307 | MS.gene31842:CDS | 15.0% |
!!! | TATTTTGGTTATTATTATCT+TGG | + | chr1.1:14636287-14636306 | MS.gene31842:CDS | 15.0% |
!!! | TGATTTTCTAAAATTATTAG+TGG | + | chr1.1:14633567-14633586 | MS.gene31842:intron | 15.0% |
!! | AAAAGTTAAAACAACAAATC+CGG | - | chr1.1:14635432-14635451 | None:intergenic | 20.0% |
!! | AATAAACATAAAAATTGGGT+AGG | - | chr1.1:14635019-14635038 | None:intergenic | 20.0% |
!! | AGTCATACTCAAATAAAATT+GGG | - | chr1.1:14633419-14633438 | None:intergenic | 20.0% |
!! | ATATATCAAACTCTATATCA+CGG | + | chr1.1:14636358-14636377 | MS.gene31842:CDS | 20.0% |
!! | ATCTATGTATCAATGAATAT+GGG | - | chr1.1:14635053-14635072 | None:intergenic | 20.0% |
!! | ATTAATTGAATCTTATTGTC+TGG | + | chr1.1:14637835-14637854 | MS.gene31842:intron | 20.0% |
!! | ATTGTTACTCAACAATAATT+TGG | - | chr1.1:14634821-14634840 | None:intergenic | 20.0% |
!! | CAGCATTGTTAATAATAATT+TGG | - | chr1.1:14635982-14636001 | None:intergenic | 20.0% |
!! | TAATGTTCTTGAAAATTTGA+AGG | + | chr1.1:14636684-14636703 | MS.gene31842:CDS | 20.0% |
!! | TATCTATGTATCAATGAATA+TGG | - | chr1.1:14635054-14635073 | None:intergenic | 20.0% |
!! | TCAATTATCCAAGAAAATAA+AGG | + | chr1.1:14635879-14635898 | MS.gene31842:intron | 20.0% |
!! | TGTTCATTAACATTGAAAAT+AGG | - | chr1.1:14637421-14637440 | None:intergenic | 20.0% |
!! | TTCTGTGTAATTATATATGT+CGG | - | chr1.1:14633542-14633561 | None:intergenic | 20.0% |
!! | TTTCAAGAACATTAGTTATT+TGG | - | chr1.1:14636678-14636697 | None:intergenic | 20.0% |
!!! | ACCAAAATAATTTTCCAATT+CGG | - | chr1.1:14636276-14636295 | None:intergenic | 20.0% |
!!! | ATCTAAATGAAATTTTCACA+TGG | + | chr1.1:14638505-14638524 | MS.gene31842:CDS | 20.0% |
!!! | GTTAGTTTGTATTTTGAATT+TGG | + | chr1.1:14634232-14634251 | MS.gene31842:intron | 20.0% |
!!! | TACAAATTTTTGGTTCTAAA+TGG | + | chr1.1:14634582-14634601 | MS.gene31842:intron | 20.0% |
!!! | TGAGTGTAGTATTTAAATTT+TGG | + | chr1.1:14635109-14635128 | MS.gene31842:intron | 20.0% |
!!! | TTTTGAGTGTAAATTAATTC+TGG | + | chr1.1:14633849-14633868 | MS.gene31842:intron | 20.0% |
! | AAACAATAAGTGATTATCAC+AGG | + | chr1.1:14638151-14638170 | MS.gene31842:CDS | 25.0% |
! | AAAGCTGTTAATTAGAGTTA+TGG | + | chr1.1:14634630-14634649 | MS.gene31842:intron | 25.0% |
! | AAATTTCATTTAGATAACCC+TGG | - | chr1.1:14638500-14638519 | None:intergenic | 25.0% |
! | AACCAATTTGAGAAATACAA+AGG | - | chr1.1:14634989-14635008 | None:intergenic | 25.0% |
! | AAGTGTATGTTTGGTTAATA+TGG | + | chr1.1:14633813-14633832 | MS.gene31842:intron | 25.0% |
! | AATACATATAAGCTAGCTAT+AGG | - | chr1.1:14636029-14636048 | None:intergenic | 25.0% |
! | AATCAATTATCCCAAAAGAA+GGG | + | chr1.1:14634720-14634739 | MS.gene31842:intron | 25.0% |
! | AATCAATTATCGCAAAAGAA+GGG | + | chr1.1:14634491-14634510 | MS.gene31842:intron | 25.0% |
! | ACATTAAGCAATAAGGTAAT+CGG | - | chr1.1:14637793-14637812 | None:intergenic | 25.0% |
! | ACTTCTCTTTGTATCTTATA+TGG | + | chr1.1:14636549-14636568 | MS.gene31842:intron | 25.0% |
! | AGTGAGTTTATAAATGGATA+TGG | + | chr1.1:14634750-14634769 | MS.gene31842:intron | 25.0% |
! | ATAAAAGGTTATTGAAGTCT+CGG | - | chr1.1:14637360-14637379 | None:intergenic | 25.0% |
! | ATGAAAATCACTCTACTAAT+TGG | - | chr1.1:14636523-14636542 | None:intergenic | 25.0% |
! | CAAAATCAATTATACTCTAG+AGG | + | chr1.1:14634006-14634025 | MS.gene31842:intron | 25.0% |
! | CATTGTTGTCTTAATCATTT+GGG | + | chr1.1:14635934-14635953 | MS.gene31842:intron | 25.0% |
! | CCAAATCAATTGATAAAACA+AGG | - | chr1.1:14634437-14634456 | None:intergenic | 25.0% |
! | GAGTCATACTCAAATAAAAT+TGG | - | chr1.1:14633420-14633439 | None:intergenic | 25.0% |
! | GCATAATTGAAAAACTATAG+CGG | + | chr1.1:14633702-14633721 | MS.gene31842:intron | 25.0% |
! | GCATTGTTGTCTAATTATTT+AGG | + | chr1.1:14634773-14634792 | MS.gene31842:intron | 25.0% |
! | GTGAGTTTATAAATGGATAT+GGG | + | chr1.1:14634751-14634770 | MS.gene31842:intron | 25.0% |
! | TCTTGAAAATTTGAAGGATA+AGG | + | chr1.1:14636690-14636709 | MS.gene31842:CDS | 25.0% |
! | TGCAAATTAACTATAGCATA+AGG | - | chr1.1:14635633-14635652 | None:intergenic | 25.0% |
! | TTAGAAGACTGAGTTTATTA+GGG | + | chr1.1:14635903-14635922 | MS.gene31842:intron | 25.0% |
! | TTCCTTTGTATTTCTCAAAT+TGG | + | chr1.1:14634984-14635003 | MS.gene31842:intron | 25.0% |
! | TTTAGAAGACTGAGTTTATT+AGG | + | chr1.1:14635902-14635921 | MS.gene31842:intron | 25.0% |
! | TTTCAATTATGCAATACACA+GGG | - | chr1.1:14633694-14633713 | None:intergenic | 25.0% |
! | TTTCATAGTTGAAAGTTAGT+TGG | - | chr1.1:14634278-14634297 | None:intergenic | 25.0% |
!! | AACTTTTGTCCAATTTTTTG+TGG | + | chr1.1:14635445-14635464 | MS.gene31842:intron | 25.0% |
!! | AAGTAAAGAGATTTGGAATT+GGG | - | chr1.1:14637089-14637108 | None:intergenic | 25.0% |
!! | ACTTTTGTCCAATTTTTTGT+GGG | + | chr1.1:14635446-14635465 | MS.gene31842:intron | 25.0% |
!! | ATTTGGCATTTTGTAATAAG+TGG | + | chr1.1:14635652-14635671 | MS.gene31842:intron | 25.0% |
!! | CATCTTTTCTTAATATTGAC+TGG | + | chr1.1:14636650-14636669 | MS.gene31842:CDS | 25.0% |
!! | GCATGGAAAATACAAATTTT+CGG | + | chr1.1:14635749-14635768 | MS.gene31842:intron | 25.0% |
!! | TAAATGAAATTTTCACATGG+TGG | + | chr1.1:14638508-14638527 | MS.gene31842:CDS | 25.0% |
!! | TATTGTTCTAAGTGTATGTT+TGG | + | chr1.1:14633804-14633823 | MS.gene31842:intron | 25.0% |
!! | TCTAAAATTATTAGTGGTGT+CGG | + | chr1.1:14633573-14633592 | MS.gene31842:intron | 25.0% |
!! | TTCAACAGAAAATTTTCACT+CGG | + | chr1.1:14637999-14638018 | MS.gene31842:intron | 25.0% |
!! | TTTTCAATTATGCAATACAC+AGG | - | chr1.1:14633695-14633714 | None:intergenic | 25.0% |
!! | TTTTCTTCAATATTCAGATC+TGG | - | chr1.1:14637476-14637495 | None:intergenic | 25.0% |
!!! | ATTAGTTTCGTTTCTAAAGT+TGG | + | chr1.1:14636413-14636432 | MS.gene31842:intron | 25.0% |
!!! | CACAAATTTTTGGTTCTAAT+TGG | + | chr1.1:14634353-14634372 | MS.gene31842:intron | 25.0% |
!!! | CCTTGTTTTATCAATTGATT+TGG | + | chr1.1:14634434-14634453 | MS.gene31842:intron | 25.0% |
!!! | CTATTTTAGAAACTTTGAGT+TGG | + | chr1.1:14635499-14635518 | MS.gene31842:intron | 25.0% |
!!! | CTTCTAAACCTTTATTTTCT+TGG | - | chr1.1:14635890-14635909 | None:intergenic | 25.0% |
!!! | TAGGACTTTGTTTTCTTTTT+TGG | + | chr1.1:14634792-14634811 | MS.gene31842:intron | 25.0% |
!!! | TGAATGAAGAAGTTGATAAT+CGG | - | chr1.1:14633283-14633302 | None:intergenic | 25.0% |
!!! | TGATTTTTTTTCCTCTCTAT+TGG | + | chr1.1:14636144-14636163 | MS.gene31842:intron | 25.0% |
!!! | TGCTATAGTTAATTTGCATT+TGG | + | chr1.1:14635635-14635654 | MS.gene31842:intron | 25.0% |
!!! | TTAGATATGAGAGCTATTTT+AGG | + | chr1.1:14634116-14634135 | MS.gene31842:intron | 25.0% |
!!! | TTATCTGTTTTCTTTAGAAC+CGG | + | chr1.1:14635410-14635429 | MS.gene31842:intron | 25.0% |
AACAGACCAAAATTCAAATC+AGG | - | chr1.1:14634939-14634958 | None:intergenic | 30.0% | |
AATGAGATTGTATCCTACAA+TGG | + | chr1.1:14638468-14638487 | MS.gene31842:CDS | 30.0% | |
ACAGACCAAAATTCAAATCA+GGG | - | chr1.1:14634938-14634957 | None:intergenic | 30.0% | |
ATATTTCAGGCATCTCAAAA+AGG | - | chr1.1:14638356-14638375 | None:intergenic | 30.0% | |
ATTTCTGAGTATAAGAAGGT+CGG | - | chr1.1:14638325-14638344 | None:intergenic | 30.0% | |
CATGTATACTGGAAATTCAA+AGG | - | chr1.1:14637938-14637957 | None:intergenic | 30.0% | |
CATTGAACGAATCTTGAAAT+TGG | + | chr1.1:14635708-14635727 | MS.gene31842:intron | 30.0% | |
CGAAAATGCAAATCAAATCA+AGG | - | chr1.1:14633326-14633345 | None:intergenic | 30.0% | |
CTTTCAACTATGAAAGAGAT+TGG | + | chr1.1:14634283-14634302 | MS.gene31842:intron | 30.0% | |
CTTTGAATTTCCAGTATACA+TGG | + | chr1.1:14637936-14637955 | MS.gene31842:intron | 30.0% | |
GAACTTCTTGAAACATTTCT+GGG | + | chr1.1:14638551-14638570 | MS.gene31842:CDS | 30.0% | |
GAATCAATTATCCCAAAAGA+AGG | + | chr1.1:14634719-14634738 | MS.gene31842:intron | 30.0% | |
GAATCAATTATCGCAAAAGA+AGG | + | chr1.1:14634490-14634509 | MS.gene31842:intron | 30.0% | |
GACATGAAACCATCAAATTT+AGG | - | chr1.1:14636388-14636407 | None:intergenic | 30.0% | |
GAGAAGATCTCAAAAAAACA+AGG | + | chr1.1:14636188-14636207 | MS.gene31842:CDS | 30.0% | |
GATTATCAACTTCTTCATTC+AGG | + | chr1.1:14633282-14633301 | MS.gene31842:CDS | 30.0% | |
GATTGAATGAATCTTGAGTT+TGG | + | chr1.1:14634308-14634327 | MS.gene31842:intron | 30.0% | |
GCATTGTTGTCTTAATCATT+TGG | + | chr1.1:14635933-14635952 | MS.gene31842:intron | 30.0% | |
TAAGAAGCTAAACGTATGTT+TGG | - | chr1.1:14634096-14634115 | None:intergenic | 30.0% | |
TAATCATCTATCTAAGGACA+GGG | - | chr1.1:14634853-14634872 | None:intergenic | 30.0% | |
TAGAAGACTGAGTTTATTAG+GGG | + | chr1.1:14635904-14635923 | MS.gene31842:intron | 30.0% | |
TAGAGGAGTGAGTTTATAAA+TGG | + | chr1.1:14634744-14634763 | MS.gene31842:intron | 30.0% | |
TCAAGTAGAATCAATTCTAG+AGG | + | chr1.1:14633983-14634002 | MS.gene31842:intron | 30.0% | |
TCAATCTCAAATTGCTACAA+AGG | - | chr1.1:14635541-14635560 | None:intergenic | 30.0% | |
TCCATACAATTCAAAGAATC+AGG | + | chr1.1:14638202-14638221 | MS.gene31842:CDS | 30.0% | |
TCCTGATTCTTTGAATTGTA+TGG | - | chr1.1:14638206-14638225 | None:intergenic | 30.0% | |
TCTGCACATATATATGTTTG+TGG | + | chr1.1:14638060-14638079 | MS.gene31842:CDS | 30.0% | |
TGAACTTCTTGAAACATTTC+TGG | + | chr1.1:14638550-14638569 | MS.gene31842:CDS | 30.0% | |
TGATCAGTATTATAAACTGC+TGG | - | chr1.1:14636339-14636358 | None:intergenic | 30.0% | |
TGCAATTTATACTCCTATCT+TGG | - | chr1.1:14636251-14636270 | None:intergenic | 30.0% | |
TTCTCTGACATTAAGCAATA+AGG | - | chr1.1:14637800-14637819 | None:intergenic | 30.0% | |
TTGCACATTTCAACTACTTA+TGG | + | chr1.1:14638437-14638456 | MS.gene31842:CDS | 30.0% | |
TTTATACTCCTATCTTGGAA+TGG | - | chr1.1:14636246-14636265 | None:intergenic | 30.0% | |
! | AGAAAATTTTCACTCGGAAA+GGG | + | chr1.1:14638005-14638024 | MS.gene31842:intron | 30.0% |
! | CAAATCAGGGTTCAAAATTT+TGG | - | chr1.1:14634925-14634944 | None:intergenic | 30.0% |
! | CAAGTAAAGAGATTTGGAAT+TGG | - | chr1.1:14637090-14637109 | None:intergenic | 30.0% |
! | CGATATTTCTGAGTATAAGA+AGG | - | chr1.1:14638329-14638348 | None:intergenic | 30.0% |
! | GAGACTTCAATAACCTTTTA+TGG | + | chr1.1:14637359-14637378 | MS.gene31842:intron | 30.0% |
! | GAGTGAAAATTTTCTGTTGA+AGG | - | chr1.1:14638000-14638019 | None:intergenic | 30.0% |
! | GCCGAATTGGAAAATTATTT+TGG | + | chr1.1:14636272-14636291 | MS.gene31842:CDS | 30.0% |
! | GCGTAGCAAATACAAATTTT+TGG | + | chr1.1:14634572-14634591 | MS.gene31842:intron | 30.0% |
! | TATTTGCTACGCTTACTATT+CGG | - | chr1.1:14634564-14634583 | None:intergenic | 30.0% |
! | TGGGATTCTGTTTTCTTTTT+TGG | + | chr1.1:14635953-14635972 | MS.gene31842:intron | 30.0% |
! | TTCAAGAAGTTCATGTGTTT+TGG | - | chr1.1:14638543-14638562 | None:intergenic | 30.0% |
!! | ATATTTATTCTTTGGGTTGC+AGG | + | chr1.1:14636572-14636591 | MS.gene31842:intron | 30.0% |
!! | CTTTGAGGATTTTTGTTTCT+GGG | + | chr1.1:14638914-14638933 | MS.gene31842:CDS | 30.0% |
!! | TGAAAAGTGCTAAAAGAACA+AGG | - | chr1.1:14637283-14637302 | None:intergenic | 30.0% |
!! | TGATTTGAATTTTGGTCTGT+TGG | + | chr1.1:14634938-14634957 | MS.gene31842:intron | 30.0% |
!! | TTGAACCCTGATTTGAATTT+TGG | + | chr1.1:14634930-14634949 | MS.gene31842:intron | 30.0% |
!!! | GTTTTTTTGAGATCTTCTCT+TGG | - | chr1.1:14636187-14636206 | None:intergenic | 30.0% |
!!! | TCTTTTGGGATAATTGATTC+AGG | - | chr1.1:14634719-14634738 | None:intergenic | 30.0% |
AACACCATAGATACTAGTCA+AGG | + | chr1.1:14637437-14637456 | MS.gene31842:intron | 35.0% | |
AAGAAAGGAAACTACAGCAA+TGG | + | chr1.1:14638849-14638868 | MS.gene31842:CDS | 35.0% | |
AAGGATAAGGACACATATCA+GGG | + | chr1.1:14636703-14636722 | MS.gene31842:CDS | 35.0% | |
AAGGGAAAGTGATTTATGTC+TGG | + | chr1.1:14633886-14633905 | MS.gene31842:intron | 35.0% | |
AATTATCGCAAAAGAAGGGT+TGG | + | chr1.1:14634495-14634514 | MS.gene31842:intron | 35.0% | |
ACAACAATACAAACCCACTT+GGG | - | chr1.1:14635382-14635401 | None:intergenic | 35.0% | |
ACATATGTAAACGACAGGAA+TGG | + | chr1.1:14636598-14636617 | MS.gene31842:CDS | 35.0% | |
ACCTGAATGAAGTTGACAAT+CGG | - | chr1.1:14634885-14634904 | None:intergenic | 35.0% | |
ACTATCTAGGTACTAAACCA+TGG | + | chr1.1:14638649-14638668 | MS.gene31842:CDS | 35.0% | |
AGGATGGAAAATTGTAAGCA+AGG | - | chr1.1:14636316-14636335 | None:intergenic | 35.0% | |
AGTTGAAATGTGCAATTCGA+TGG | - | chr1.1:14638432-14638451 | None:intergenic | 35.0% | |
ATAAGTGATTATCACAGGAG+TGG | + | chr1.1:14638156-14638175 | MS.gene31842:CDS | 35.0% | |
ATGCTTCTAGTAACATCACT+TGG | + | chr1.1:14636815-14636834 | MS.gene31842:CDS | 35.0% | |
ATGGTTTAGTACCTAGATAG+TGG | - | chr1.1:14638650-14638669 | None:intergenic | 35.0% | |
ATTACAGCAAATTTCGTCTC+TGG | + | chr1.1:14638262-14638281 | MS.gene31842:CDS | 35.0% | |
ATTGCTGTAGTTTCCTTTCT+TGG | - | chr1.1:14638850-14638869 | None:intergenic | 35.0% | |
CACATATTCCATTCCAAGAT+AGG | + | chr1.1:14636235-14636254 | MS.gene31842:CDS | 35.0% | |
CACGGTATACCTAAATTTGA+TGG | + | chr1.1:14636376-14636395 | MS.gene31842:intron | 35.0% | |
CAGATCTGAATGTTGAAGAA+AGG | + | chr1.1:14637551-14637570 | MS.gene31842:intron | 35.0% | |
CTAAATTAGCCCACTCAAAT+TGG | + | chr1.1:14635281-14635300 | MS.gene31842:intron | 35.0% | |
CTAATCATCTATCTAAGGAC+AGG | - | chr1.1:14634854-14634873 | None:intergenic | 35.0% | |
CTAGTTAACTCCATGTATAC+TGG | - | chr1.1:14637949-14637968 | None:intergenic | 35.0% | |
CTGGTTAAAATTGAGCTGAA+GGG | + | chr1.1:14633868-14633887 | MS.gene31842:intron | 35.0% | |
CTTTATGTCATCCACTATCT+AGG | + | chr1.1:14638636-14638655 | MS.gene31842:CDS | 35.0% | |
CTTTCTTCAACATTCAGATC+TGG | - | chr1.1:14637553-14637572 | None:intergenic | 35.0% | |
GATAGTTCACATGAACCAAT+AGG | - | chr1.1:14637192-14637211 | None:intergenic | 35.0% | |
GTATAAATTGCAAGCCGAAT+TGG | + | chr1.1:14636259-14636278 | MS.gene31842:CDS | 35.0% | |
TAGCTTGACCCACAAAAAAT+TGG | - | chr1.1:14635457-14635476 | None:intergenic | 35.0% | |
TATCTATGAGAAAGTCCAAG+CGG | - | chr1.1:14636116-14636135 | None:intergenic | 35.0% | |
TATTATAAACTGCTGGAGGA+TGG | - | chr1.1:14636332-14636351 | None:intergenic | 35.0% | |
TCAACTATGAAAGAGATTGG+TGG | + | chr1.1:14634286-14634305 | MS.gene31842:intron | 35.0% | |
TCAGTATTATAAACTGCTGG+AGG | - | chr1.1:14636336-14636355 | None:intergenic | 35.0% | |
TCCAAATCTCTTTACTTGCA+AGG | + | chr1.1:14637092-14637111 | MS.gene31842:CDS | 35.0% | |
TCCTTGCAAGTAAAGAGATT+TGG | - | chr1.1:14637096-14637115 | None:intergenic | 35.0% | |
TCGTATTCATTCAAGAGATC+AGG | + | chr1.1:14637648-14637667 | MS.gene31842:intron | 35.0% | |
TCTGGTTAAAATTGAGCTGA+AGG | + | chr1.1:14633867-14633886 | MS.gene31842:intron | 35.0% | |
TCTTCTTCATCTATCCATTC+TGG | - | chr1.1:14636853-14636872 | None:intergenic | 35.0% | |
TCTTTGATGCCAATTTGAGT+GGG | - | chr1.1:14635293-14635312 | None:intergenic | 35.0% | |
TGAACTATCAGTTCCTTTGA+AGG | + | chr1.1:14637203-14637222 | MS.gene31842:CDS | 35.0% | |
TGCTTCTAGTAACATCACTT+GGG | + | chr1.1:14636816-14636835 | MS.gene31842:CDS | 35.0% | |
TTGCGAATCATGGAAAATAG+CGG | - | chr1.1:14636471-14636490 | None:intergenic | 35.0% | |
TTTCCTATGGCTGATATTTC+AGG | - | chr1.1:14638369-14638388 | None:intergenic | 35.0% | |
! | AAATTTTCACATGGTGGCAT+CGG | + | chr1.1:14638514-14638533 | MS.gene31842:CDS | 35.0% |
! | CAGAAAATTTTCACTCGGAA+AGG | + | chr1.1:14638004-14638023 | MS.gene31842:intron | 35.0% |
! | GCGTAGCAAACACAAATTTT+TGG | + | chr1.1:14634343-14634362 | MS.gene31842:intron | 35.0% |
! | GGTTTAATCTTTAGCTTAGC+TGG | + | chr1.1:14634959-14634978 | MS.gene31842:intron | 35.0% |
! | TAGTGGATGACATAAAGGAT+TGG | - | chr1.1:14638633-14638652 | None:intergenic | 35.0% |
! | TGTTACTAGAAGCATAGTTC+AGG | - | chr1.1:14636810-14636829 | None:intergenic | 35.0% |
! | TGTTTGCTACGCTTACTATT+CGG | - | chr1.1:14634335-14634354 | None:intergenic | 35.0% |
! | TTCCTGTCGTTTACATATGT+AGG | - | chr1.1:14636598-14636617 | None:intergenic | 35.0% |
! | TTCTTGAAACATTTCTGGGA+AGG | + | chr1.1:14638555-14638574 | MS.gene31842:CDS | 35.0% |
!! | ATGTTTGGTTCCACTTTTAG+AGG | - | chr1.1:14634081-14634100 | None:intergenic | 35.0% |
!! | CAATGTTTGTTTTCCCAACT+CGG | + | chr1.1:14637583-14637602 | MS.gene31842:intron | 35.0% |
!! | CTAGATAGTGGATGACATAA+AGG | - | chr1.1:14638638-14638657 | None:intergenic | 35.0% |
!! | TTACACCTCTAGAATCAGTT+TGG | + | chr1.1:14634052-14634071 | MS.gene31842:intron | 35.0% |
!!! | GCTTTGAGGATTTTTGTTTC+TGG | + | chr1.1:14638913-14638932 | MS.gene31842:CDS | 35.0% |
!!! | TTTTGGTTCTAAATGGTGCT+AGG | + | chr1.1:14634589-14634608 | MS.gene31842:intron | 35.0% |
!!! | TTTTGGTTCTAATTGGTGCT+AGG | + | chr1.1:14634360-14634379 | MS.gene31842:intron | 35.0% |
AACCGAAAAAGAAACGTGTG+CGG | - | chr1.1:14637728-14637747 | None:intergenic | 40.0% | |
AACTCGGAGATGTTGCTAAT+TGG | + | chr1.1:14637599-14637618 | MS.gene31842:intron | 40.0% | |
AAGGATATTATGCAGCGTGA+CGG | + | chr1.1:14637111-14637130 | MS.gene31842:CDS | 40.0% | |
AATGCTACACTGTTCAACTC+AGG | + | chr1.1:14638390-14638409 | MS.gene31842:CDS | 40.0% | |
AATTAGCAACATCTCCGAGT+TGG | - | chr1.1:14637600-14637619 | None:intergenic | 40.0% | |
ACACTAGGTTGTAACAAGCA+TGG | + | chr1.1:14633640-14633659 | MS.gene31842:intron | 40.0% | |
ACAGCAATAAGATCAAGACG+TGG | - | chr1.1:14636931-14636950 | None:intergenic | 40.0% | |
ACCGATTGTCAACTTCATTC+AGG | + | chr1.1:14634881-14634900 | MS.gene31842:intron | 40.0% | |
ACTACACTCATTGCACTTTC+AGG | - | chr1.1:14635099-14635118 | None:intergenic | 40.0% | |
ACTCGGAGATGTTGCTAATT+GGG | + | chr1.1:14637600-14637619 | MS.gene31842:intron | 40.0% | |
ACTGAGTTTATTAGGGGACA+TGG | + | chr1.1:14635910-14635929 | MS.gene31842:intron | 40.0% | |
ACTGTTCAACTCAGGTGTAA+TGG | + | chr1.1:14638398-14638417 | MS.gene31842:CDS | 40.0% | |
ATGAAAGTGAGATTGACCAC+TGG | + | chr1.1:14636746-14636765 | MS.gene31842:CDS | 40.0% | |
ATGCCTGAAATATCAGCCAT+AGG | + | chr1.1:14638363-14638382 | MS.gene31842:CDS | 40.0% | |
ATGTCTTAGTGCGTTCCATA+AGG | + | chr1.1:14637878-14637897 | MS.gene31842:intron | 40.0% | |
ATTAGCAACATCTCCGAGTT+GGG | - | chr1.1:14637599-14637618 | None:intergenic | 40.0% | |
ATTGGGAAAATGACCAGTGT+AGG | + | chr1.1:14637617-14637636 | MS.gene31842:intron | 40.0% | |
CACAACAATACAAACCCACT+TGG | - | chr1.1:14635383-14635402 | None:intergenic | 40.0% | |
CACATGAACCAATAGGTAAC+TGG | - | chr1.1:14637185-14637204 | None:intergenic | 40.0% | |
CAGAATAGTACGAGTAAGCA+TGG | + | chr1.1:14635732-14635751 | MS.gene31842:intron | 40.0% | |
CAGTGTAGCATTGTTTCCTA+TGG | - | chr1.1:14638382-14638401 | None:intergenic | 40.0% | |
CATATATATGTGCAGAGTGC+AGG | - | chr1.1:14638056-14638075 | None:intergenic | 40.0% | |
CATTCGAATACTTTGAGCTG+CGG | - | chr1.1:14638094-14638113 | None:intergenic | 40.0% | |
CGTGGCTAATCATCTATCTA+AGG | - | chr1.1:14634859-14634878 | None:intergenic | 40.0% | |
CTCTTTGATGCCAATTTGAG+TGG | - | chr1.1:14635294-14635313 | None:intergenic | 40.0% | |
CTGAGTTTATTAGGGGACAT+GGG | + | chr1.1:14635911-14635930 | MS.gene31842:intron | 40.0% | |
GAAGGATAAGGACACATATC+AGG | + | chr1.1:14636702-14636721 | MS.gene31842:CDS | 40.0% | |
GACACCTTGACTAGTATCTA+TGG | - | chr1.1:14637444-14637463 | None:intergenic | 40.0% | |
GAGATTGTATCCTACAATGG+TGG | + | chr1.1:14638471-14638490 | MS.gene31842:CDS | 40.0% | |
GGATTGTTGCATAAGCTTCT+CGG | - | chr1.1:14638035-14638054 | None:intergenic | 40.0% | |
GTGTTGTCAATTGCGAATCA+TGG | - | chr1.1:14636481-14636500 | None:intergenic | 40.0% | |
TAATCTCGGAAACAAAGCCA+TGG | - | chr1.1:14638669-14638688 | None:intergenic | 40.0% | |
TACCACAGTTACTATGCTGT+CGG | + | chr1.1:14635171-14635190 | MS.gene31842:intron | 40.0% | |
TACGAATTAATGCCCTACAC+TGG | - | chr1.1:14637633-14637652 | None:intergenic | 40.0% | |
TAGCTATAGGCATCTATGCA+AGG | - | chr1.1:14636016-14636035 | None:intergenic | 40.0% | |
TATCCCAAAAGAAGGGTTAG+AGG | + | chr1.1:14634727-14634746 | MS.gene31842:intron | 40.0% | |
TATGAAACACGGACACTCTT+TGG | + | chr1.1:14633491-14633510 | MS.gene31842:intron | 40.0% | |
TGCAGAAGTTCTGTTTGCTT+AGG | + | chr1.1:14638784-14638803 | MS.gene31842:CDS | 40.0% | |
TGGATGACATAAAGGATTGG+TGG | - | chr1.1:14638630-14638649 | None:intergenic | 40.0% | |
TTATGGAACGCACTAAGACA+TGG | - | chr1.1:14637879-14637898 | None:intergenic | 40.0% | |
TTCCACTCGTTATATGCTTC+TGG | - | chr1.1:14638243-14638262 | None:intergenic | 40.0% | |
TTGGGAAAATGACCAGTGTA+GGG | + | chr1.1:14637618-14637637 | MS.gene31842:intron | 40.0% | |
! | AACCAGAAGCATATAACGAG+TGG | + | chr1.1:14638238-14638257 | MS.gene31842:CDS | 40.0% |
! | ACTCCTCTAACCCTTCTTTT+GGG | - | chr1.1:14634733-14634752 | None:intergenic | 40.0% |
! | AGTTTGGTCTCCTCTAAAAG+TGG | + | chr1.1:14634068-14634087 | MS.gene31842:intron | 40.0% |
! | CAGAACTTCTGCAAGTTTTC+TGG | - | chr1.1:14638777-14638796 | None:intergenic | 40.0% |
! | GAGAGTATGTTATGGCATTG+GGG | + | chr1.1:14638936-14638955 | MS.gene31842:CDS | 40.0% |
! | GCTCAAAGTATTCGAATGTC+TGG | + | chr1.1:14638096-14638115 | MS.gene31842:CDS | 40.0% |
! | GGAGAGTATGTTATGGCATT+GGG | + | chr1.1:14638935-14638954 | MS.gene31842:CDS | 40.0% |
! | GTTTCTGGGAGAGTATGTTA+TGG | + | chr1.1:14638928-14638947 | MS.gene31842:CDS | 40.0% |
! | TCAAAGCACGTTTTCAAACG+CGG | - | chr1.1:14638900-14638919 | None:intergenic | 40.0% |
! | TCAGTTCCTTTGAAGGCTAA+AGG | + | chr1.1:14637210-14637229 | MS.gene31842:CDS | 40.0% |
! | TGCATTTTTCCGCAATGTCA+AGG | - | chr1.1:14637313-14637332 | None:intergenic | 40.0% |
!! | AAAGAGTGTCCGTGTTTCAT+AGG | - | chr1.1:14633492-14633511 | None:intergenic | 40.0% |
!! | TATAGCGGTTACTCTGAAGT+TGG | + | chr1.1:14633717-14633736 | MS.gene31842:intron | 40.0% |
!!! | GATTTAGTTTTGACAGCAGC+AGG | - | chr1.1:14639005-14639024 | None:intergenic | 40.0% |
!!! | TATGCTTCTGGTTCTGCTTT+TGG | - | chr1.1:14638231-14638250 | None:intergenic | 40.0% |
AAGGACACATATCAGGGTGT+TGG | + | chr1.1:14636709-14636728 | MS.gene31842:CDS | 45.0% | |
AATACTTTGAGCTGCGGTGA+TGG | - | chr1.1:14638088-14638107 | None:intergenic | 45.0% | |
AGGATATTATGCAGCGTGAC+GGG | + | chr1.1:14637112-14637131 | MS.gene31842:CDS | 45.0% | |
ATCCGACAGCATAGTAACTG+TGG | - | chr1.1:14635176-14635195 | None:intergenic | 45.0% | |
ATGCACTGGATGAAACCCTT+TGG | - | chr1.1:14637043-14637062 | None:intergenic | 45.0% | |
CAATACAAACCCACTTGGGT+TGG | - | chr1.1:14635378-14635397 | None:intergenic | 45.0% | |
CAATGCAATTGCAGCTGCAT+CGG | - | chr1.1:14637337-14637356 | None:intergenic | 45.0% | |
CAATGCGAACCTTGACATTG+CGG | + | chr1.1:14637301-14637320 | MS.gene31842:intron | 45.0% | |
CACGCTTTCAAGAGCCATAT+TGG | - | chr1.1:14637904-14637923 | None:intergenic | 45.0% | |
CGGTTAGTAGTTAGCGATGT+GGG | - | chr1.1:14637773-14637792 | None:intergenic | 45.0% | |
CTACTTGTCCAACACTACCT+AGG | + | chr1.1:14636887-14636906 | MS.gene31842:CDS | 45.0% | |
CTCTCTGAGTTTATGCAGGT+CGG | - | chr1.1:14637157-14637176 | None:intergenic | 45.0% | |
CTTCACTGCATCCAATAGAG+AGG | - | chr1.1:14636158-14636177 | None:intergenic | 45.0% | |
GAAACTACAGCAATGGTCAC+TGG | + | chr1.1:14638856-14638875 | MS.gene31842:CDS | 45.0% | |
GAAGGGTTGGAACTTAGAAG+AGG | + | chr1.1:14634508-14634527 | MS.gene31842:intron | 45.0% | |
GAGAAGCTCCAGTTACCTAT+TGG | + | chr1.1:14637174-14637193 | MS.gene31842:CDS | 45.0% | |
GCATAGAACAACCACAGTTG+CGG | - | chr1.1:14637388-14637407 | None:intergenic | 45.0% | |
GCGTTTGAAAACGTGCTTTG+AGG | + | chr1.1:14638899-14638918 | MS.gene31842:CDS | 45.0% | |
GCTTCTCTCTGAGTTTATGC+AGG | - | chr1.1:14637161-14637180 | None:intergenic | 45.0% | |
GGCCTACATATGTAAACGAC+AGG | + | chr1.1:14636593-14636612 | MS.gene31842:intron | 45.0% | |
GGGAAGACTTGTATCCAGAA+TGG | + | chr1.1:14636836-14636855 | MS.gene31842:CDS | 45.0% | |
GGTTGGAACTTAGAAGAGGT+TGG | + | chr1.1:14634512-14634531 | MS.gene31842:intron | 45.0% | |
GTTCAACTCAGGTGTAATGG+TGG | + | chr1.1:14638401-14638420 | MS.gene31842:CDS | 45.0% | |
TAGGCATCTATGCAAGGACA+AGG | - | chr1.1:14636010-14636029 | None:intergenic | 45.0% | |
TCCAACACTACCTAGGATTC+AGG | + | chr1.1:14636894-14636913 | MS.gene31842:CDS | 45.0% | |
TCCAGTTGCAGTCGTAATCT+CGG | - | chr1.1:14638683-14638702 | None:intergenic | 45.0% | |
TCGGTTAGTAGTTAGCGATG+TGG | - | chr1.1:14637774-14637793 | None:intergenic | 45.0% | |
TCTCTGAGTTTATGCAGGTC+GGG | - | chr1.1:14637156-14637175 | None:intergenic | 45.0% | |
TGATTATCACAGGAGTGGCT+TGG | + | chr1.1:14638161-14638180 | MS.gene31842:CDS | 45.0% | |
TGCGTTCCATAAGGCCAATA+TGG | + | chr1.1:14637887-14637906 | MS.gene31842:intron | 45.0% | |
TGGAACTTAGAAGAGGTTGG+TGG | + | chr1.1:14634515-14634534 | MS.gene31842:intron | 45.0% | |
TTTGCTTAGGTCGAAGCAGA+AGG | + | chr1.1:14638797-14638816 | MS.gene31842:CDS | 45.0% | |
! | AAGAAACGTGTGCGGCTTTT+AGG | - | chr1.1:14637720-14637739 | None:intergenic | 45.0% |
! | ACGGACACTCTTTGGATTAG+AGG | + | chr1.1:14633499-14633518 | MS.gene31842:intron | 45.0% |
! | AGATCAAGACGTGGTTTTCC+TGG | - | chr1.1:14636922-14636941 | None:intergenic | 45.0% |
! | AGCCGCACACGTTTCTTTTT+CGG | + | chr1.1:14637723-14637742 | MS.gene31842:intron | 45.0% |
! | CAAAGCACGTTTTCAAACGC+GGG | - | chr1.1:14638899-14638918 | None:intergenic | 45.0% |
! | CACTCCTCTAACCCTTCTTT+TGG | - | chr1.1:14634734-14634753 | None:intergenic | 45.0% |
! | CTAGGTAGTGTTGGACAAGT+AGG | - | chr1.1:14636889-14636908 | None:intergenic | 45.0% |
! | GGAGACCAAACTGATTCTAG+AGG | - | chr1.1:14634060-14634079 | None:intergenic | 45.0% |
! | GGGAGAGTATGTTATGGCAT+TGG | + | chr1.1:14638934-14638953 | MS.gene31842:CDS | 45.0% |
! | GTCACGAAAAGTACATGCAC+TGG | - | chr1.1:14637057-14637076 | None:intergenic | 45.0% |
! | TAGAAGCATAGTTCAGGCGA+AGG | - | chr1.1:14636804-14636823 | None:intergenic | 45.0% |
! | TCCTGACCTTTAGCCTTCAA+AGG | - | chr1.1:14637219-14637238 | None:intergenic | 45.0% |
! | TCCTTTGAAGGCTAAAGGTC+AGG | + | chr1.1:14637215-14637234 | MS.gene31842:intron | 45.0% |
!! | CAAGAGCCATATTGGCCTTA+TGG | - | chr1.1:14637896-14637915 | None:intergenic | 45.0% |
!! | CTTCTGCAAGTTTTCTGGCA+TGG | - | chr1.1:14638772-14638791 | None:intergenic | 45.0% |
!! | GAAGTTGATAATCGGTGACG+TGG | - | chr1.1:14633275-14633294 | None:intergenic | 45.0% |
!!! | TTAGTTTTGACAGCAGCAGG+TGG | - | chr1.1:14639002-14639021 | None:intergenic | 45.0% |
!!! | TTTTTTTTTTTTAAGAATTT+GGG | - | chr1.1:14637683-14637702 | None:intergenic | 5.0% |
!!! | TTTTTTTTTTTTTAAGAATT+TGG | - | chr1.1:14637684-14637703 | None:intergenic | 5.0% |
AACGCGTGATCTCGTGATTC+TGG | + | chr1.1:14638122-14638141 | MS.gene31842:CDS | 50.0% | |
ACAGTTGCGGCAGCCATAAA+AGG | - | chr1.1:14637375-14637394 | None:intergenic | 50.0% | |
AGGACTACATGCTCAGCTTC+TGG | - | chr1.1:14636784-14636803 | None:intergenic | 50.0% | |
AGGCGACGAGGATGAGAAAA+AGG | + | chr1.1:14638575-14638594 | MS.gene31842:CDS | 50.0% | |
GAAGTTGACAATCGGTGACG+TGG | - | chr1.1:14634877-14634896 | None:intergenic | 50.0% | |
GAATCGAACCTGAGACCTCA+AGG | + | chr1.1:14635313-14635332 | MS.gene31842:intron | 50.0% | |
GATCGTAGACAGGCCAAGAA+AGG | + | chr1.1:14638834-14638853 | MS.gene31842:CDS | 50.0% | |
GCCTGAATCCTAGGTAGTGT+TGG | - | chr1.1:14636898-14636917 | None:intergenic | 50.0% | |
GCGACGAAAACTCGTCTCTT+TGG | + | chr1.1:14638597-14638616 | MS.gene31842:CDS | 50.0% | |
GTCCCAAGCCAATTACCACT+AGG | + | chr1.1:14635352-14635371 | MS.gene31842:intron | 50.0% | |
GTTAGAGTGGGATCGTAGAC+AGG | + | chr1.1:14638824-14638843 | MS.gene31842:CDS | 50.0% | |
TAATCGGTGACGTGGCTCAA+CGG | - | chr1.1:14633267-14633286 | None:intergenic | 50.0% | |
TCCGAGATTACGACTGCAAC+TGG | + | chr1.1:14638679-14638698 | MS.gene31842:CDS | 50.0% | |
TGGAGTGCACTCTGTAAGCA+AGG | + | chr1.1:14635129-14635148 | MS.gene31842:intron | 50.0% | |
TGGCCTAGTGGTAATTGGCT+TGG | - | chr1.1:14635358-14635377 | None:intergenic | 50.0% | |
TTACGACTGCAACTGGAACG+TGG | + | chr1.1:14638686-14638705 | MS.gene31842:CDS | 50.0% | |
TTCATTGGAGCGGACACACT+AGG | + | chr1.1:14633625-14633644 | MS.gene31842:intron | 50.0% | |
TTTCCTGGTGCCTGAATCCT+AGG | - | chr1.1:14636907-14636926 | None:intergenic | 50.0% | |
! | ATCCTACAATGGTGGTGACC+AGG | + | chr1.1:14638479-14638498 | MS.gene31842:CDS | 50.0% |
! | CTGCTTCTTTTGTTGCCGCT+TGG | + | chr1.1:14636098-14636117 | MS.gene31842:intron | 50.0% |
! | GGCATTGGGGTGACAAGAAT+TGG | + | chr1.1:14638949-14638968 | MS.gene31842:CDS | 50.0% |
! | GGCCTAGTGGTAATTGGCTT+GGG | - | chr1.1:14635357-14635376 | None:intergenic | 50.0% |
! | GTCTTGCTGCTTCAATCTGC+AGG | - | chr1.1:14637008-14637027 | None:intergenic | 50.0% |
! | TCCTACAATGGTGGTGACCA+GGG | + | chr1.1:14638480-14638499 | MS.gene31842:CDS | 50.0% |
! | TTTTATGGCTGCCGCAACTG+TGG | + | chr1.1:14637374-14637393 | MS.gene31842:intron | 50.0% |
!! | AGACTTGCTGCGACTTCCAA+AGG | + | chr1.1:14637024-14637043 | MS.gene31842:CDS | 50.0% |
!! | GACTTGCTGCGACTTCCAAA+GGG | + | chr1.1:14637025-14637044 | MS.gene31842:CDS | 50.0% |
!! | TGGGTTGGCCTAGTGGTAAT+TGG | - | chr1.1:14635363-14635382 | None:intergenic | 50.0% |
!! | TGGTAATTGGCTTGGGACCT+GGG | - | chr1.1:14635350-14635369 | None:intergenic | 50.0% |
AAGCTTCCCTGCGACAAGTC+AGG | + | chr1.1:14636952-14636971 | MS.gene31842:CDS | 55.0% | |
ACCACTAGGCCAACCCAAGT+GGG | + | chr1.1:14635366-14635385 | MS.gene31842:intron | 55.0% | |
ACCCTGGTCACCACCATTGT+AGG | - | chr1.1:14638484-14638503 | None:intergenic | 55.0% | |
AGCAGAAGGCAGCGTTAGAG+TGG | + | chr1.1:14638811-14638830 | MS.gene31842:CDS | 55.0% | |
AGCTTCCCTGCGACAAGTCA+GGG | + | chr1.1:14636953-14636972 | MS.gene31842:CDS | 55.0% | |
ATGAAGCGCGGATACGGACA+CGG | - | chr1.1:14633610-14633629 | None:intergenic | 55.0% | |
ATGTAGCTCATGCGAGGTGG+TGG | + | chr1.1:14638733-14638752 | MS.gene31842:CDS | 55.0% | |
CAGGTCGGGTTCATAAAGCC+AGG | - | chr1.1:14637142-14637161 | None:intergenic | 55.0% | |
CGAGCAATGTAGCTCATGCG+AGG | + | chr1.1:14638727-14638746 | MS.gene31842:CDS | 55.0% | |
CTACCTAGGATTCAGGCACC+AGG | + | chr1.1:14636901-14636920 | MS.gene31842:CDS | 55.0% | |
CTGGAACGTGGACATTCTGC+AGG | + | chr1.1:14638698-14638717 | MS.gene31842:CDS | 55.0% | |
CTGGTACTAGCTGCTTCCAG+TGG | - | chr1.1:14636765-14636784 | None:intergenic | 55.0% | |
GCAATGTAGCTCATGCGAGG+TGG | + | chr1.1:14638730-14638749 | MS.gene31842:CDS | 55.0% | |
GCAGAAGGCAGCGTTAGAGT+GGG | + | chr1.1:14638812-14638831 | MS.gene31842:CDS | 55.0% | |
GCGAGCGGACCTATGAAACA+CGG | + | chr1.1:14633480-14633499 | MS.gene31842:intron | 55.0% | |
GCTCCAATGAAGCGCGGATA+CGG | - | chr1.1:14633616-14633635 | None:intergenic | 55.0% | |
GTATCCGCGCTTCATTGGAG+CGG | + | chr1.1:14633615-14633634 | MS.gene31842:intron | 55.0% | |
TACCACTAGGCCAACCCAAG+TGG | + | chr1.1:14635365-14635384 | MS.gene31842:intron | 55.0% | |
TAGACGCTCGAGCGCATTAG+TGG | + | chr1.1:14635072-14635091 | MS.gene31842:intron | 55.0% | |
TCGAACCTGAGACCTCAAGG+AGG | + | chr1.1:14635316-14635335 | MS.gene31842:intron | 55.0% | |
TGACGTGGCTCAACGGTGTT+AGG | - | chr1.1:14633260-14633279 | None:intergenic | 55.0% | |
TGTCCGTATCCGCGCTTCAT+TGG | + | chr1.1:14633610-14633629 | MS.gene31842:intron | 55.0% | |
! | ACATTTCTGGGAAGGCGACG+AGG | + | chr1.1:14638563-14638582 | MS.gene31842:CDS | 55.0% |
! | ACGTGGCTCAACGGTGTTAG+GGG | - | chr1.1:14633258-14633277 | None:intergenic | 55.0% |
! | GACGTGGCTCAACGGTGTTA+GGG | - | chr1.1:14633259-14633278 | None:intergenic | 55.0% |
!! | GTGGTAATTGGCTTGGGACC+TGG | - | chr1.1:14635351-14635370 | None:intergenic | 55.0% |
CGAGTGCATAGCAGAGCGAG+CGG | + | chr1.1:14633465-14633484 | MS.gene31842:intron | 60.0% | |
CGCTCTGCTATGCACTCGAG+CGG | - | chr1.1:14633463-14633482 | None:intergenic | 60.0% | |
GTGCTCCTCCTTGAGGTCTC+AGG | - | chr1.1:14635324-14635343 | None:intergenic | 60.0% | |
GTGTCCGCTCCAATGAAGCG+CGG | - | chr1.1:14633622-14633641 | None:intergenic | 60.0% | |
! | GGCTCAACGGTGTTAGGGGT+GGG | - | chr1.1:14633254-14633273 | None:intergenic | 60.0% |
! | TCAAGGAGGAGCACACTCCC+AGG | + | chr1.1:14635330-14635349 | MS.gene31842:intron | 60.0% |
! | TGGCTCAACGGTGTTAGGGG+TGG | - | chr1.1:14633255-14633274 | None:intergenic | 60.0% |
! | TGGGAGTGTGCTCCTCCTTG+AGG | - | chr1.1:14635331-14635350 | None:intergenic | 60.0% |
!! | ACCCACTTGGGTTGGCCTAG+TGG | - | chr1.1:14635370-14635389 | None:intergenic | 60.0% |
!! | AGCTCATGCGAGGTGGTGGA+AGG | + | chr1.1:14638737-14638756 | MS.gene31842:CDS | 60.0% |
! | AGGAGTGGCTTGGCAGCAGC+TGG | + | chr1.1:14638171-14638190 | MS.gene31842:CDS | 65.0% |
! | CAGCGCCCTGACTTGTCGCA+GGG | - | chr1.1:14636961-14636980 | None:intergenic | 65.0% |
! | GTGGCTTGGCAGCAGCTGGA+TGG | + | chr1.1:14638175-14638194 | MS.gene31842:CDS | 65.0% |
! | TGCAGCGTGACGGGAATGCC+TGG | + | chr1.1:14637121-14637140 | MS.gene31842:CDS | 65.0% |
CCTGCGACAAGTCAGGGCGC+TGG | + | chr1.1:14636959-14636978 | MS.gene31842:CDS | 70.0% | |
! | CCAGCGCCCTGACTTGTCGC+AGG | - | chr1.1:14636962-14636981 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 14633242 | 14639040 | 14633242 | ID=MS.gene31842 |
chr1.1 | mRNA | 14633242 | 14639040 | 14633242 | ID=MS.gene31842.t1;Parent=MS.gene31842 |
chr1.1 | exon | 14633242 | 14633303 | 14633242 | ID=MS.gene31842.t1.exon1;Parent=MS.gene31842.t1 |
chr1.1 | CDS | 14633242 | 14633303 | 14633242 | ID=cds.MS.gene31842.t1;Parent=MS.gene31842.t1 |
chr1.1 | exon | 14636173 | 14636379 | 14636173 | ID=MS.gene31842.t1.exon2;Parent=MS.gene31842.t1 |
chr1.1 | CDS | 14636173 | 14636379 | 14636173 | ID=cds.MS.gene31842.t1;Parent=MS.gene31842.t1 |
chr1.1 | exon | 14636594 | 14637231 | 14636594 | ID=MS.gene31842.t1.exon3;Parent=MS.gene31842.t1 |
chr1.1 | CDS | 14636594 | 14637231 | 14636594 | ID=cds.MS.gene31842.t1;Parent=MS.gene31842.t1 |
chr1.1 | exon | 14638007 | 14639040 | 14638007 | ID=MS.gene31842.t1.exon4;Parent=MS.gene31842.t1 |
chr1.1 | CDS | 14638007 | 14639040 | 14638007 | ID=cds.MS.gene31842.t1;Parent=MS.gene31842.t1 |
Gene Sequence |
Protein sequence |