Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31842.t1 | XP_024631264.1 | 97.8 | 646 | 14 | 0 | 1 | 646 | 1 | 646 | 0.00E+00 | 1344.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31842.t1 | Q8W4A7 | 68.1 | 626 | 162 | 9 | 4 | 623 | 3 | 596 | 5.3e-257 | 888.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31842.t1 | A0A396JHX9 | 97.8 | 646 | 14 | 0 | 1 | 646 | 1 | 646 | 0.0e+00 | 1344.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene31842 | MS.gene30980 | PPI |
| MS.gene31842 | MS.gene06426 | PPI |
| MS.gene013329 | MS.gene31842 | PPI |
| MS.gene31842 | MS.gene049302 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31842.t1 | MTR_1g029130 | 97.608 | 627 | 15 | 0 | 20 | 646 | 1 | 627 | 0.0 | 1282 |
| MS.gene31842.t1 | MTR_3g095910 | 65.224 | 647 | 211 | 6 | 1 | 646 | 4 | 637 | 0.0 | 874 |
| MS.gene31842.t1 | MTR_1g019540 | 48.454 | 485 | 228 | 7 | 135 | 601 | 55 | 535 | 1.89e-167 | 489 |
| MS.gene31842.t1 | MTR_1g019540 | 48.454 | 485 | 228 | 7 | 135 | 601 | 108 | 588 | 5.87e-167 | 490 |
| MS.gene31842.t1 | MTR_1g019530 | 47.390 | 479 | 236 | 7 | 135 | 601 | 110 | 584 | 7.93e-157 | 464 |
| MS.gene31842.t1 | MTR_1g082880 | 42.278 | 518 | 252 | 10 | 113 | 603 | 53 | 550 | 2.39e-137 | 413 |
| MS.gene31842.t1 | MTR_7g113610 | 40.196 | 510 | 264 | 9 | 122 | 601 | 57 | 555 | 4.60e-133 | 402 |
| MS.gene31842.t1 | MTR_1g080460 | 36.000 | 175 | 106 | 5 | 304 | 475 | 16 | 187 | 3.41e-28 | 119 |
| MS.gene31842.t1 | MTR_7g115460 | 35.758 | 165 | 101 | 4 | 313 | 475 | 35 | 196 | 9.83e-27 | 115 |
| MS.gene31842.t1 | MTR_1g084670 | 26.923 | 260 | 134 | 9 | 309 | 524 | 18 | 265 | 7.65e-17 | 82.4 |
| MS.gene31842.t1 | MTR_1g084670 | 26.407 | 231 | 129 | 6 | 307 | 496 | 16 | 246 | 6.24e-16 | 79.0 |
| MS.gene31842.t1 | MTR_1g084670 | 32.500 | 120 | 78 | 1 | 307 | 423 | 16 | 135 | 1.10e-15 | 77.4 |
| MS.gene31842.t1 | MTR_7g109920 | 26.459 | 257 | 133 | 8 | 312 | 524 | 24 | 268 | 1.44e-15 | 79.0 |
| MS.gene31842.t1 | MTR_4g132185 | 25.854 | 205 | 113 | 3 | 309 | 474 | 19 | 223 | 2.46e-15 | 77.8 |
| MS.gene31842.t1 | MTR_7g109920 | 26.238 | 202 | 110 | 3 | 312 | 474 | 24 | 225 | 2.86e-15 | 77.0 |
| MS.gene31842.t1 | MTR_7g111850 | 24.016 | 254 | 139 | 7 | 314 | 524 | 26 | 268 | 5.30e-14 | 73.9 |
| MS.gene31842.t1 | MTR_1g084660 | 26.459 | 257 | 126 | 9 | 309 | 524 | 18 | 252 | 2.76e-13 | 71.6 |
| MS.gene31842.t1 | MTR_1g084660 | 25.385 | 260 | 133 | 8 | 307 | 527 | 16 | 253 | 2.35e-12 | 68.2 |
| MS.gene31842.t1 | MTR_4g100950 | 25.000 | 176 | 117 | 5 | 311 | 474 | 36 | 208 | 9.67e-12 | 68.2 |
| MS.gene31842.t1 | MTR_5g012590 | 25.568 | 176 | 116 | 5 | 311 | 474 | 38 | 210 | 2.48e-11 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31842.t1 | AT1G77130 | 68.109 | 624 | 161 | 9 | 4 | 621 | 3 | 594 | 0.0 | 876 |
| MS.gene31842.t1 | AT3G18660 | 60.870 | 644 | 216 | 8 | 10 | 636 | 17 | 641 | 0.0 | 783 |
| MS.gene31842.t1 | AT3G18660 | 60.870 | 644 | 215 | 8 | 10 | 636 | 17 | 640 | 0.0 | 783 |
| MS.gene31842.t1 | AT3G18660 | 60.896 | 647 | 215 | 9 | 10 | 636 | 17 | 645 | 0.0 | 780 |
| MS.gene31842.t1 | AT4G33330 | 49.281 | 487 | 228 | 5 | 135 | 606 | 43 | 525 | 2.34e-170 | 496 |
| MS.gene31842.t1 | AT4G33330 | 49.281 | 487 | 228 | 5 | 135 | 606 | 111 | 593 | 2.37e-169 | 496 |
| MS.gene31842.t1 | AT4G33330 | 49.281 | 487 | 228 | 5 | 135 | 606 | 122 | 604 | 2.76e-169 | 497 |
| MS.gene31842.t1 | AT4G33330 | 49.793 | 482 | 223 | 5 | 135 | 601 | 111 | 588 | 6.12e-169 | 496 |
| MS.gene31842.t1 | AT1G08990 | 45.825 | 491 | 236 | 9 | 135 | 603 | 79 | 561 | 4.41e-144 | 431 |
| MS.gene31842.t1 | AT1G54940 | 43.381 | 491 | 240 | 10 | 135 | 601 | 74 | 550 | 9.60e-138 | 414 |
| MS.gene31842.t1 | AT4G33330 | 48.138 | 349 | 163 | 4 | 135 | 468 | 122 | 467 | 7.41e-107 | 331 |
| MS.gene31842.t1 | AT5G18480 | 37.222 | 180 | 107 | 5 | 297 | 474 | 16 | 191 | 9.30e-31 | 127 |
| MS.gene31842.t1 | AT1G60470 | 27.138 | 269 | 135 | 8 | 305 | 524 | 11 | 267 | 1.25e-17 | 85.1 |
| MS.gene31842.t1 | AT4G26250 | 26.296 | 270 | 143 | 8 | 299 | 524 | 12 | 269 | 1.61e-17 | 84.7 |
| MS.gene31842.t1 | AT1G09350 | 27.519 | 258 | 130 | 8 | 312 | 524 | 15 | 260 | 2.45e-17 | 84.3 |
| MS.gene31842.t1 | AT1G56600 | 25.623 | 281 | 147 | 9 | 289 | 524 | 3 | 266 | 6.84e-17 | 82.8 |
| MS.gene31842.t1 | AT1G60450 | 26.794 | 209 | 112 | 4 | 307 | 474 | 13 | 221 | 1.41e-15 | 79.0 |
| MS.gene31842.t1 | AT2G47180 | 23.077 | 299 | 169 | 9 | 302 | 556 | 19 | 300 | 8.69e-15 | 76.6 |
| MS.gene31842.t1 | AT5G30500 | 25.000 | 200 | 110 | 3 | 312 | 471 | 24 | 223 | 1.40e-14 | 74.3 |
| MS.gene31842.t1 | AT5G30500 | 25.269 | 186 | 99 | 3 | 312 | 457 | 24 | 209 | 3.12e-13 | 71.6 |
| MS.gene31842.t1 | AT5G23790 | 22.006 | 309 | 180 | 9 | 307 | 571 | 16 | 307 | 3.73e-12 | 68.6 |
| MS.gene31842.t1 | AT2G35710 | 26.966 | 178 | 113 | 6 | 311 | 475 | 61 | 234 | 1.29e-11 | 66.6 |
| MS.gene31842.t1 | AT2G35710 | 26.966 | 178 | 113 | 6 | 311 | 475 | 61 | 234 | 9.33e-11 | 65.1 |
Find 144 sgRNAs with CRISPR-Local
Find 372 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAACTTCTTGAAACATTTC+TGG | 0.133286 | 1.1:+14638550 | MS.gene31842:CDS |
| ATTGCTGTAGTTTCCTTTCT+TGG | 0.140768 | 1.1:-14638847 | None:intergenic |
| GCCGAATTGGAAAATTATTT+TGG | 0.148185 | 1.1:+14636272 | MS.gene31842:CDS |
| TATGCTTCTGGTTCTGCTTT+TGG | 0.153956 | 1.1:-14638228 | None:intergenic |
| TTTCAAGAACATTAGTTATT+TGG | 0.160948 | 1.1:-14636675 | None:intergenic |
| TTTCCTATGGCTGATATTTC+AGG | 0.192514 | 1.1:-14638366 | None:intergenic |
| TTGCACATTTCAACTACTTA+TGG | 0.215615 | 1.1:+14638437 | MS.gene31842:CDS |
| TCTTCTTCATCTATCCATTC+TGG | 0.242049 | 1.1:-14636850 | None:intergenic |
| TGACGTGGCTCAACGGTGTT+AGG | 0.251716 | 1.1:-14633257 | None:intergenic |
| TTCAAGAAGTTCATGTGTTT+TGG | 0.260706 | 1.1:-14638540 | None:intergenic |
| TTCCACTCGTTATATGCTTC+TGG | 0.267699 | 1.1:-14638240 | None:intergenic |
| TCCTTGCAAGTAAAGAGATT+TGG | 0.288240 | 1.1:-14637093 | None:intergenic |
| GCGACGAAAACTCGTCTCTT+TGG | 0.290093 | 1.1:+14638597 | MS.gene31842:CDS |
| TCCTGATTCTTTGAATTGTA+TGG | 0.290849 | 1.1:-14638203 | None:intergenic |
| GGAGAGTATGTTATGGCATT+GGG | 0.309950 | 1.1:+14638935 | MS.gene31842:CDS |
| GGCATTGGGGTGACAAGAAT+TGG | 0.313543 | 1.1:+14638949 | MS.gene31842:CDS |
| GAAGGATAAGGACACATATC+AGG | 0.317828 | 1.1:+14636702 | MS.gene31842:CDS |
| TGCAATTTATACTCCTATCT+TGG | 0.320523 | 1.1:-14636248 | None:intergenic |
| GATTATCAACTTCTTCATTC+AGG | 0.320645 | 1.1:+14633282 | MS.gene31842:CDS |
| AACGCGTGATCTCGTGATTC+TGG | 0.330372 | 1.1:+14638122 | MS.gene31842:CDS |
| TCCGAGATTACGACTGCAAC+TGG | 0.347243 | 1.1:+14638679 | MS.gene31842:CDS |
| AAGTAAAGAGATTTGGAATT+GGG | 0.351966 | 1.1:-14637086 | None:intergenic |
| AGGCGACGAGGATGAGAAAA+AGG | 0.356243 | 1.1:+14638575 | MS.gene31842:CDS |
| CAAGTAAAGAGATTTGGAAT+TGG | 0.363595 | 1.1:-14637087 | None:intergenic |
| TCCATACAATTCAAAGAATC+AGG | 0.366674 | 1.1:+14638202 | MS.gene31842:CDS |
| GTATAAATTGCAAGCCGAAT+TGG | 0.369269 | 1.1:+14636259 | MS.gene31842:CDS |
| AGGACTACATGCTCAGCTTC+TGG | 0.371387 | 1.1:-14636781 | None:intergenic |
| TCTTGAAAATTTGAAGGATA+AGG | 0.375525 | 1.1:+14636690 | MS.gene31842:CDS |
| CTCTCTGAGTTTATGCAGGT+CGG | 0.379464 | 1.1:-14637154 | None:intergenic |
| TAATGTTCTTGAAAATTTGA+AGG | 0.384534 | 1.1:+14636684 | MS.gene31842:CDS |
| AAGCTTCCCTGCGACAAGTC+AGG | 0.395485 | 1.1:+14636952 | MS.gene31842:CDS |
| TGAACTATCAGTTCCTTTGA+AGG | 0.396557 | 1.1:+14637203 | MS.gene31842:CDS |
| CTTTATGTCATCCACTATCT+AGG | 0.402882 | 1.1:+14638636 | MS.gene31842:CDS |
| TTTCCTGGTGCCTGAATCCT+AGG | 0.405848 | 1.1:-14636904 | None:intergenic |
| CACATGAACCAATAGGTAAC+TGG | 0.406938 | 1.1:-14637182 | None:intergenic |
| GAGAAGCTCCAGTTACCTAT+TGG | 0.407327 | 1.1:+14637174 | MS.gene31842:CDS |
| TCCAACACTACCTAGGATTC+AGG | 0.408343 | 1.1:+14636894 | MS.gene31842:CDS |
| GGGAGAGTATGTTATGGCAT+TGG | 0.410396 | 1.1:+14638934 | MS.gene31842:CDS |
| AGGAGTGGCTTGGCAGCAGC+TGG | 0.412642 | 1.1:+14638171 | MS.gene31842:CDS |
| CACATATTCCATTCCAAGAT+AGG | 0.413633 | 1.1:+14636235 | MS.gene31842:CDS |
| GTCTTGCTGCTTCAATCTGC+AGG | 0.421473 | 1.1:-14637005 | None:intergenic |
| ATATTTCAGGCATCTCAAAA+AGG | 0.428904 | 1.1:-14638353 | None:intergenic |
| GAACTTCTTGAAACATTTCT+GGG | 0.433094 | 1.1:+14638551 | MS.gene31842:CDS |
| GTTTCTGGGAGAGTATGTTA+TGG | 0.438372 | 1.1:+14638928 | MS.gene31842:CDS |
| ATCCTACAATGGTGGTGACC+AGG | 0.447256 | 1.1:+14638479 | MS.gene31842:CDS |
| GCGTTTGAAAACGTGCTTTG+AGG | 0.447428 | 1.1:+14638899 | MS.gene31842:CDS |
| ATTACAGCAAATTTCGTCTC+TGG | 0.450343 | 1.1:+14638262 | MS.gene31842:CDS |
| GGATTGTTGCATAAGCTTCT+CGG | 0.451047 | 1.1:-14638032 | None:intergenic |
| TCAGTTCCTTTGAAGGCTAA+AGG | 0.454613 | 1.1:+14637210 | MS.gene31842:CDS |
| GATAGTTCACATGAACCAAT+AGG | 0.459168 | 1.1:-14637189 | None:intergenic |
| GCTCAAAGTATTCGAATGTC+TGG | 0.460744 | 1.1:+14638096 | MS.gene31842:CDS |
| GACGTGGCTCAACGGTGTTA+GGG | 0.461218 | 1.1:-14633256 | None:intergenic |
| CTAGATAGTGGATGACATAA+AGG | 0.461375 | 1.1:-14638635 | None:intergenic |
| TGAATGAAGAAGTTGATAAT+CGG | 0.465528 | 1.1:-14633280 | None:intergenic |
| TGCAGAAGTTCTGTTTGCTT+AGG | 0.469003 | 1.1:+14638784 | MS.gene31842:CDS |
| TCCAAATCTCTTTACTTGCA+AGG | 0.470250 | 1.1:+14637092 | MS.gene31842:CDS |
| TGCAGCGTGACGGGAATGCC+TGG | 0.473934 | 1.1:+14637121 | MS.gene31842:CDS |
| AGACTTGCTGCGACTTCCAA+AGG | 0.473992 | 1.1:+14637024 | MS.gene31842:CDS |
| TGTTACTAGAAGCATAGTTC+AGG | 0.483810 | 1.1:-14636807 | None:intergenic |
| TCTGCACATATATATGTTTG+TGG | 0.485140 | 1.1:+14638060 | MS.gene31842:CDS |
| TCTCTGAGTTTATGCAGGTC+GGG | 0.486148 | 1.1:-14637153 | None:intergenic |
| AGGATATTATGCAGCGTGAC+GGG | 0.490590 | 1.1:+14637112 | MS.gene31842:CDS |
| GTTAGAGTGGGATCGTAGAC+AGG | 0.496234 | 1.1:+14638824 | MS.gene31842:CDS |
| CATATATATGTGCAGAGTGC+AGG | 0.498763 | 1.1:-14638053 | None:intergenic |
| GGCTCAACGGTGTTAGGGGT+GGG | 0.500757 | 1.1:-14633251 | None:intergenic |
| CCAGCGCCCTGACTTGTCGC+AGG | 0.504978 | 1.1:-14636959 | None:intergenic |
| ATGTAGCTCATGCGAGGTGG+TGG | 0.505348 | 1.1:+14638733 | MS.gene31842:CDS |
| ATGCTTCTAGTAACATCACT+TGG | 0.506425 | 1.1:+14636815 | MS.gene31842:CDS |
| GAAACTACAGCAATGGTCAC+TGG | 0.506581 | 1.1:+14638856 | MS.gene31842:CDS |
| CAGTGTAGCATTGTTTCCTA+TGG | 0.507446 | 1.1:-14638379 | None:intergenic |
| TGGCTCAACGGTGTTAGGGG+TGG | 0.508596 | 1.1:-14633252 | None:intergenic |
| TGATCAGTATTATAAACTGC+TGG | 0.510064 | 1.1:-14636336 | None:intergenic |
| TTTATACTCCTATCTTGGAA+TGG | 0.510475 | 1.1:-14636243 | None:intergenic |
| ACTGTTCAACTCAGGTGTAA+TGG | 0.513305 | 1.1:+14638398 | MS.gene31842:CDS |
| ACCCTGGTCACCACCATTGT+AGG | 0.514384 | 1.1:-14638481 | None:intergenic |
| ATGCACTGGATGAAACCCTT+TGG | 0.516067 | 1.1:-14637040 | None:intergenic |
| GCTTCTCTCTGAGTTTATGC+AGG | 0.516546 | 1.1:-14637158 | None:intergenic |
| AATACTTTGAGCTGCGGTGA+TGG | 0.520044 | 1.1:-14638085 | None:intergenic |
| TTCTTGAAACATTTCTGGGA+AGG | 0.522014 | 1.1:+14638555 | MS.gene31842:CDS |
| TCCAGTTGCAGTCGTAATCT+CGG | 0.522527 | 1.1:-14638680 | None:intergenic |
| AGCAGAAGGCAGCGTTAGAG+TGG | 0.527478 | 1.1:+14638811 | MS.gene31842:CDS |
| GACTTGCTGCGACTTCCAAA+GGG | 0.531841 | 1.1:+14637025 | MS.gene31842:CDS |
| TCCTGACCTTTAGCCTTCAA+AGG | 0.531986 | 1.1:-14637216 | None:intergenic |
| AGCTTCCCTGCGACAAGTCA+GGG | 0.533888 | 1.1:+14636953 | MS.gene31842:CDS |
| GTGGCTTGGCAGCAGCTGGA+TGG | 0.534926 | 1.1:+14638175 | MS.gene31842:CDS |
| CTACTTGTCCAACACTACCT+AGG | 0.544561 | 1.1:+14636887 | MS.gene31842:CDS |
| GCCTGAATCCTAGGTAGTGT+TGG | 0.546134 | 1.1:-14636895 | None:intergenic |
| CCTGCGACAAGTCAGGGCGC+TGG | 0.547118 | 1.1:+14636959 | MS.gene31842:CDS |
| TGATTATCACAGGAGTGGCT+TGG | 0.547142 | 1.1:+14638161 | MS.gene31842:CDS |
| TGGATGACATAAAGGATTGG+TGG | 0.547445 | 1.1:-14638627 | None:intergenic |
| TATTATAAACTGCTGGAGGA+TGG | 0.547827 | 1.1:-14636329 | None:intergenic |
| CTGGAACGTGGACATTCTGC+AGG | 0.550039 | 1.1:+14638698 | MS.gene31842:CDS |
| GATCGTAGACAGGCCAAGAA+AGG | 0.550520 | 1.1:+14638834 | MS.gene31842:CDS |
| CGATATTTCTGAGTATAAGA+AGG | 0.553853 | 1.1:-14638326 | None:intergenic |
| TTCCTGTCGTTTACATATGT+AGG | 0.555071 | 1.1:-14636595 | None:intergenic |
| AAACAATAAGTGATTATCAC+AGG | 0.557166 | 1.1:+14638151 | MS.gene31842:CDS |
| CTAGGTAGTGTTGGACAAGT+AGG | 0.557193 | 1.1:-14636886 | None:intergenic |
| ATGGTTTAGTACCTAGATAG+TGG | 0.565355 | 1.1:-14638647 | None:intergenic |
| AAGGACACATATCAGGGTGT+TGG | 0.565940 | 1.1:+14636709 | MS.gene31842:CDS |
| GGCCTACATATGTAAACGAC+AGG | 0.567340 | 1.1:+14636593 | MS.gene31842:intron |
| GTCACGAAAAGTACATGCAC+TGG | 0.569264 | 1.1:-14637054 | None:intergenic |
| AGTTGAAATGTGCAATTCGA+TGG | 0.571909 | 1.1:-14638429 | None:intergenic |
| CAGGTCGGGTTCATAAAGCC+AGG | 0.574180 | 1.1:-14637139 | None:intergenic |
| TAATCGGTGACGTGGCTCAA+CGG | 0.574534 | 1.1:-14633264 | None:intergenic |
| AGCTCATGCGAGGTGGTGGA+AGG | 0.575417 | 1.1:+14638737 | MS.gene31842:CDS |
| TTTGCTTAGGTCGAAGCAGA+AGG | 0.575458 | 1.1:+14638797 | MS.gene31842:CDS |
| ACGTGGCTCAACGGTGTTAG+GGG | 0.578176 | 1.1:-14633255 | None:intergenic |
| TCCTACAATGGTGGTGACCA+GGG | 0.581119 | 1.1:+14638480 | MS.gene31842:CDS |
| ATGCCTGAAATATCAGCCAT+AGG | 0.584336 | 1.1:+14638363 | MS.gene31842:CDS |
| GGGAAGACTTGTATCCAGAA+TGG | 0.585294 | 1.1:+14636836 | MS.gene31842:CDS |
| AGGATGGAAAATTGTAAGCA+AGG | 0.589153 | 1.1:-14636313 | None:intergenic |
| ACATATGTAAACGACAGGAA+TGG | 0.596076 | 1.1:+14636598 | MS.gene31842:CDS |
| CAGCGCCCTGACTTGTCGCA+GGG | 0.596806 | 1.1:-14636958 | None:intergenic |
| CTACCTAGGATTCAGGCACC+AGG | 0.597753 | 1.1:+14636901 | MS.gene31842:CDS |
| AAGGATATTATGCAGCGTGA+CGG | 0.600793 | 1.1:+14637111 | MS.gene31842:CDS |
| TAGTGGATGACATAAAGGAT+TGG | 0.601872 | 1.1:-14638630 | None:intergenic |
| AATGAGATTGTATCCTACAA+TGG | 0.606182 | 1.1:+14638468 | MS.gene31842:CDS |
| AAATTTCATTTAGATAACCC+TGG | 0.606443 | 1.1:-14638497 | None:intergenic |
| GCAGAAGGCAGCGTTAGAGT+GGG | 0.609692 | 1.1:+14638812 | MS.gene31842:CDS |
| ATATATCAAACTCTATATCA+CGG | 0.621311 | 1.1:+14636358 | MS.gene31842:CDS |
| ATGAAAGTGAGATTGACCAC+TGG | 0.622446 | 1.1:+14636746 | MS.gene31842:CDS |
| AACCAGAAGCATATAACGAG+TGG | 0.623151 | 1.1:+14638238 | MS.gene31842:CDS |
| TGACTTGATTCGAAGATGAG+GGG | 0.623649 | 1.1:+14633227 | None:intergenic |
| CTGGTACTAGCTGCTTCCAG+TGG | 0.625456 | 1.1:-14636762 | None:intergenic |
| AAGAAAGGAAACTACAGCAA+TGG | 0.626082 | 1.1:+14638849 | MS.gene31842:CDS |
| CATTCGAATACTTTGAGCTG+CGG | 0.628095 | 1.1:-14638091 | None:intergenic |
| ATTTCTGAGTATAAGAAGGT+CGG | 0.628917 | 1.1:-14638322 | None:intergenic |
| TAGAAGCATAGTTCAGGCGA+AGG | 0.629094 | 1.1:-14636801 | None:intergenic |
| AAGGATAAGGACACATATCA+GGG | 0.632162 | 1.1:+14636703 | MS.gene31842:CDS |
| TGCTTCTAGTAACATCACTT+GGG | 0.638241 | 1.1:+14636816 | MS.gene31842:CDS |
| AATGCTACACTGTTCAACTC+AGG | 0.645973 | 1.1:+14638390 | MS.gene31842:CDS |
| GAGAGTATGTTATGGCATTG+GGG | 0.651503 | 1.1:+14638936 | MS.gene31842:CDS |
| TAATCTCGGAAACAAAGCCA+TGG | 0.656479 | 1.1:-14638666 | None:intergenic |
| ACATTTCTGGGAAGGCGACG+AGG | 0.659097 | 1.1:+14638563 | MS.gene31842:CDS |
| TTACGACTGCAACTGGAACG+TGG | 0.659215 | 1.1:+14638686 | MS.gene31842:CDS |
| ACTATCTAGGTACTAAACCA+TGG | 0.660025 | 1.1:+14638649 | MS.gene31842:CDS |
| CGAGCAATGTAGCTCATGCG+AGG | 0.661213 | 1.1:+14638727 | MS.gene31842:CDS |
| ATAAGTGATTATCACAGGAG+TGG | 0.662338 | 1.1:+14638156 | MS.gene31842:CDS |
| TCAGTATTATAAACTGCTGG+AGG | 0.663878 | 1.1:-14636333 | None:intergenic |
| GAAGTTGATAATCGGTGACG+TGG | 0.670744 | 1.1:-14633272 | None:intergenic |
| GCAATGTAGCTCATGCGAGG+TGG | 0.689730 | 1.1:+14638730 | MS.gene31842:CDS |
| GTTCAACTCAGGTGTAATGG+TGG | 0.709097 | 1.1:+14638401 | MS.gene31842:CDS |
| GAGATTGTATCCTACAATGG+TGG | 0.728088 | 1.1:+14638471 | MS.gene31842:CDS |
| ACAGCAATAAGATCAAGACG+TGG | 0.768801 | 1.1:-14636928 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTAATTTTTTTTCTTATT+TGG | + | chr1.1:14633353-14633372 | MS.gene31842:intron | 10.0% |
| !!! | TGTTTAATTTTCATTTTTTT+TGG | + | chr1.1:14634193-14634212 | MS.gene31842:intron | 10.0% |
| !!! | TTTTCATTTATGTATAAATT+TGG | + | chr1.1:14635605-14635624 | MS.gene31842:intron | 10.0% |
| !! | ATTCAATTATATATTTGAAG+AGG | + | chr1.1:14635843-14635862 | MS.gene31842:intron | 15.0% |
| !! | CAACAATAAACATAAAAATT+GGG | - | chr1.1:14635023-14635042 | None:intergenic | 15.0% |
| !! | TATATGGATATTTATTCTTT+GGG | + | chr1.1:14636565-14636584 | MS.gene31842:intron | 15.0% |
| !! | TATTTGTATATTTCTCAATT+TGG | + | chr1.1:14633380-14633399 | MS.gene31842:intron | 15.0% |
| !! | TCAACAATAAACATAAAAAT+TGG | - | chr1.1:14635024-14635043 | None:intergenic | 15.0% |
| !! | TTATATGGATATTTATTCTT+TGG | + | chr1.1:14636564-14636583 | MS.gene31842:intron | 15.0% |
| !! | TTGAGTGTAAAATTAAATTA+AGG | + | chr1.1:14633943-14633962 | MS.gene31842:intron | 15.0% |
| !!! | AAAATTAATTTTGACATCTT+TGG | - | chr1.1:14634034-14634053 | None:intergenic | 15.0% |
| !!! | ATTTTGGTTATTATTATCTT+GGG | + | chr1.1:14636288-14636307 | MS.gene31842:CDS | 15.0% |
| !!! | TATTTTGGTTATTATTATCT+TGG | + | chr1.1:14636287-14636306 | MS.gene31842:CDS | 15.0% |
| !!! | TGATTTTCTAAAATTATTAG+TGG | + | chr1.1:14633567-14633586 | MS.gene31842:intron | 15.0% |
| !! | AAAAGTTAAAACAACAAATC+CGG | - | chr1.1:14635432-14635451 | None:intergenic | 20.0% |
| !! | AATAAACATAAAAATTGGGT+AGG | - | chr1.1:14635019-14635038 | None:intergenic | 20.0% |
| !! | AGTCATACTCAAATAAAATT+GGG | - | chr1.1:14633419-14633438 | None:intergenic | 20.0% |
| !! | ATATATCAAACTCTATATCA+CGG | + | chr1.1:14636358-14636377 | MS.gene31842:CDS | 20.0% |
| !! | ATCTATGTATCAATGAATAT+GGG | - | chr1.1:14635053-14635072 | None:intergenic | 20.0% |
| !! | ATTAATTGAATCTTATTGTC+TGG | + | chr1.1:14637835-14637854 | MS.gene31842:intron | 20.0% |
| !! | ATTGTTACTCAACAATAATT+TGG | - | chr1.1:14634821-14634840 | None:intergenic | 20.0% |
| !! | CAGCATTGTTAATAATAATT+TGG | - | chr1.1:14635982-14636001 | None:intergenic | 20.0% |
| !! | TAATGTTCTTGAAAATTTGA+AGG | + | chr1.1:14636684-14636703 | MS.gene31842:CDS | 20.0% |
| !! | TATCTATGTATCAATGAATA+TGG | - | chr1.1:14635054-14635073 | None:intergenic | 20.0% |
| !! | TCAATTATCCAAGAAAATAA+AGG | + | chr1.1:14635879-14635898 | MS.gene31842:intron | 20.0% |
| !! | TGTTCATTAACATTGAAAAT+AGG | - | chr1.1:14637421-14637440 | None:intergenic | 20.0% |
| !! | TTCTGTGTAATTATATATGT+CGG | - | chr1.1:14633542-14633561 | None:intergenic | 20.0% |
| !! | TTTCAAGAACATTAGTTATT+TGG | - | chr1.1:14636678-14636697 | None:intergenic | 20.0% |
| !!! | ACCAAAATAATTTTCCAATT+CGG | - | chr1.1:14636276-14636295 | None:intergenic | 20.0% |
| !!! | ATCTAAATGAAATTTTCACA+TGG | + | chr1.1:14638505-14638524 | MS.gene31842:CDS | 20.0% |
| !!! | GTTAGTTTGTATTTTGAATT+TGG | + | chr1.1:14634232-14634251 | MS.gene31842:intron | 20.0% |
| !!! | TACAAATTTTTGGTTCTAAA+TGG | + | chr1.1:14634582-14634601 | MS.gene31842:intron | 20.0% |
| !!! | TGAGTGTAGTATTTAAATTT+TGG | + | chr1.1:14635109-14635128 | MS.gene31842:intron | 20.0% |
| !!! | TTTTGAGTGTAAATTAATTC+TGG | + | chr1.1:14633849-14633868 | MS.gene31842:intron | 20.0% |
| ! | AAACAATAAGTGATTATCAC+AGG | + | chr1.1:14638151-14638170 | MS.gene31842:CDS | 25.0% |
| ! | AAAGCTGTTAATTAGAGTTA+TGG | + | chr1.1:14634630-14634649 | MS.gene31842:intron | 25.0% |
| ! | AAATTTCATTTAGATAACCC+TGG | - | chr1.1:14638500-14638519 | None:intergenic | 25.0% |
| ! | AACCAATTTGAGAAATACAA+AGG | - | chr1.1:14634989-14635008 | None:intergenic | 25.0% |
| ! | AAGTGTATGTTTGGTTAATA+TGG | + | chr1.1:14633813-14633832 | MS.gene31842:intron | 25.0% |
| ! | AATACATATAAGCTAGCTAT+AGG | - | chr1.1:14636029-14636048 | None:intergenic | 25.0% |
| ! | AATCAATTATCCCAAAAGAA+GGG | + | chr1.1:14634720-14634739 | MS.gene31842:intron | 25.0% |
| ! | AATCAATTATCGCAAAAGAA+GGG | + | chr1.1:14634491-14634510 | MS.gene31842:intron | 25.0% |
| ! | ACATTAAGCAATAAGGTAAT+CGG | - | chr1.1:14637793-14637812 | None:intergenic | 25.0% |
| ! | ACTTCTCTTTGTATCTTATA+TGG | + | chr1.1:14636549-14636568 | MS.gene31842:intron | 25.0% |
| ! | AGTGAGTTTATAAATGGATA+TGG | + | chr1.1:14634750-14634769 | MS.gene31842:intron | 25.0% |
| ! | ATAAAAGGTTATTGAAGTCT+CGG | - | chr1.1:14637360-14637379 | None:intergenic | 25.0% |
| ! | ATGAAAATCACTCTACTAAT+TGG | - | chr1.1:14636523-14636542 | None:intergenic | 25.0% |
| ! | CAAAATCAATTATACTCTAG+AGG | + | chr1.1:14634006-14634025 | MS.gene31842:intron | 25.0% |
| ! | CATTGTTGTCTTAATCATTT+GGG | + | chr1.1:14635934-14635953 | MS.gene31842:intron | 25.0% |
| ! | CCAAATCAATTGATAAAACA+AGG | - | chr1.1:14634437-14634456 | None:intergenic | 25.0% |
| ! | GAGTCATACTCAAATAAAAT+TGG | - | chr1.1:14633420-14633439 | None:intergenic | 25.0% |
| ! | GCATAATTGAAAAACTATAG+CGG | + | chr1.1:14633702-14633721 | MS.gene31842:intron | 25.0% |
| ! | GCATTGTTGTCTAATTATTT+AGG | + | chr1.1:14634773-14634792 | MS.gene31842:intron | 25.0% |
| ! | GTGAGTTTATAAATGGATAT+GGG | + | chr1.1:14634751-14634770 | MS.gene31842:intron | 25.0% |
| ! | TCTTGAAAATTTGAAGGATA+AGG | + | chr1.1:14636690-14636709 | MS.gene31842:CDS | 25.0% |
| ! | TGCAAATTAACTATAGCATA+AGG | - | chr1.1:14635633-14635652 | None:intergenic | 25.0% |
| ! | TTAGAAGACTGAGTTTATTA+GGG | + | chr1.1:14635903-14635922 | MS.gene31842:intron | 25.0% |
| ! | TTCCTTTGTATTTCTCAAAT+TGG | + | chr1.1:14634984-14635003 | MS.gene31842:intron | 25.0% |
| ! | TTTAGAAGACTGAGTTTATT+AGG | + | chr1.1:14635902-14635921 | MS.gene31842:intron | 25.0% |
| ! | TTTCAATTATGCAATACACA+GGG | - | chr1.1:14633694-14633713 | None:intergenic | 25.0% |
| ! | TTTCATAGTTGAAAGTTAGT+TGG | - | chr1.1:14634278-14634297 | None:intergenic | 25.0% |
| !! | AACTTTTGTCCAATTTTTTG+TGG | + | chr1.1:14635445-14635464 | MS.gene31842:intron | 25.0% |
| !! | AAGTAAAGAGATTTGGAATT+GGG | - | chr1.1:14637089-14637108 | None:intergenic | 25.0% |
| !! | ACTTTTGTCCAATTTTTTGT+GGG | + | chr1.1:14635446-14635465 | MS.gene31842:intron | 25.0% |
| !! | ATTTGGCATTTTGTAATAAG+TGG | + | chr1.1:14635652-14635671 | MS.gene31842:intron | 25.0% |
| !! | CATCTTTTCTTAATATTGAC+TGG | + | chr1.1:14636650-14636669 | MS.gene31842:CDS | 25.0% |
| !! | GCATGGAAAATACAAATTTT+CGG | + | chr1.1:14635749-14635768 | MS.gene31842:intron | 25.0% |
| !! | TAAATGAAATTTTCACATGG+TGG | + | chr1.1:14638508-14638527 | MS.gene31842:CDS | 25.0% |
| !! | TATTGTTCTAAGTGTATGTT+TGG | + | chr1.1:14633804-14633823 | MS.gene31842:intron | 25.0% |
| !! | TCTAAAATTATTAGTGGTGT+CGG | + | chr1.1:14633573-14633592 | MS.gene31842:intron | 25.0% |
| !! | TTCAACAGAAAATTTTCACT+CGG | + | chr1.1:14637999-14638018 | MS.gene31842:intron | 25.0% |
| !! | TTTTCAATTATGCAATACAC+AGG | - | chr1.1:14633695-14633714 | None:intergenic | 25.0% |
| !! | TTTTCTTCAATATTCAGATC+TGG | - | chr1.1:14637476-14637495 | None:intergenic | 25.0% |
| !!! | ATTAGTTTCGTTTCTAAAGT+TGG | + | chr1.1:14636413-14636432 | MS.gene31842:intron | 25.0% |
| !!! | CACAAATTTTTGGTTCTAAT+TGG | + | chr1.1:14634353-14634372 | MS.gene31842:intron | 25.0% |
| !!! | CCTTGTTTTATCAATTGATT+TGG | + | chr1.1:14634434-14634453 | MS.gene31842:intron | 25.0% |
| !!! | CTATTTTAGAAACTTTGAGT+TGG | + | chr1.1:14635499-14635518 | MS.gene31842:intron | 25.0% |
| !!! | CTTCTAAACCTTTATTTTCT+TGG | - | chr1.1:14635890-14635909 | None:intergenic | 25.0% |
| !!! | TAGGACTTTGTTTTCTTTTT+TGG | + | chr1.1:14634792-14634811 | MS.gene31842:intron | 25.0% |
| !!! | TGAATGAAGAAGTTGATAAT+CGG | - | chr1.1:14633283-14633302 | None:intergenic | 25.0% |
| !!! | TGATTTTTTTTCCTCTCTAT+TGG | + | chr1.1:14636144-14636163 | MS.gene31842:intron | 25.0% |
| !!! | TGCTATAGTTAATTTGCATT+TGG | + | chr1.1:14635635-14635654 | MS.gene31842:intron | 25.0% |
| !!! | TTAGATATGAGAGCTATTTT+AGG | + | chr1.1:14634116-14634135 | MS.gene31842:intron | 25.0% |
| !!! | TTATCTGTTTTCTTTAGAAC+CGG | + | chr1.1:14635410-14635429 | MS.gene31842:intron | 25.0% |
| AACAGACCAAAATTCAAATC+AGG | - | chr1.1:14634939-14634958 | None:intergenic | 30.0% | |
| AATGAGATTGTATCCTACAA+TGG | + | chr1.1:14638468-14638487 | MS.gene31842:CDS | 30.0% | |
| ACAGACCAAAATTCAAATCA+GGG | - | chr1.1:14634938-14634957 | None:intergenic | 30.0% | |
| ATATTTCAGGCATCTCAAAA+AGG | - | chr1.1:14638356-14638375 | None:intergenic | 30.0% | |
| ATTTCTGAGTATAAGAAGGT+CGG | - | chr1.1:14638325-14638344 | None:intergenic | 30.0% | |
| CATGTATACTGGAAATTCAA+AGG | - | chr1.1:14637938-14637957 | None:intergenic | 30.0% | |
| CATTGAACGAATCTTGAAAT+TGG | + | chr1.1:14635708-14635727 | MS.gene31842:intron | 30.0% | |
| CGAAAATGCAAATCAAATCA+AGG | - | chr1.1:14633326-14633345 | None:intergenic | 30.0% | |
| CTTTCAACTATGAAAGAGAT+TGG | + | chr1.1:14634283-14634302 | MS.gene31842:intron | 30.0% | |
| CTTTGAATTTCCAGTATACA+TGG | + | chr1.1:14637936-14637955 | MS.gene31842:intron | 30.0% | |
| GAACTTCTTGAAACATTTCT+GGG | + | chr1.1:14638551-14638570 | MS.gene31842:CDS | 30.0% | |
| GAATCAATTATCCCAAAAGA+AGG | + | chr1.1:14634719-14634738 | MS.gene31842:intron | 30.0% | |
| GAATCAATTATCGCAAAAGA+AGG | + | chr1.1:14634490-14634509 | MS.gene31842:intron | 30.0% | |
| GACATGAAACCATCAAATTT+AGG | - | chr1.1:14636388-14636407 | None:intergenic | 30.0% | |
| GAGAAGATCTCAAAAAAACA+AGG | + | chr1.1:14636188-14636207 | MS.gene31842:CDS | 30.0% | |
| GATTATCAACTTCTTCATTC+AGG | + | chr1.1:14633282-14633301 | MS.gene31842:CDS | 30.0% | |
| GATTGAATGAATCTTGAGTT+TGG | + | chr1.1:14634308-14634327 | MS.gene31842:intron | 30.0% | |
| GCATTGTTGTCTTAATCATT+TGG | + | chr1.1:14635933-14635952 | MS.gene31842:intron | 30.0% | |
| TAAGAAGCTAAACGTATGTT+TGG | - | chr1.1:14634096-14634115 | None:intergenic | 30.0% | |
| TAATCATCTATCTAAGGACA+GGG | - | chr1.1:14634853-14634872 | None:intergenic | 30.0% | |
| TAGAAGACTGAGTTTATTAG+GGG | + | chr1.1:14635904-14635923 | MS.gene31842:intron | 30.0% | |
| TAGAGGAGTGAGTTTATAAA+TGG | + | chr1.1:14634744-14634763 | MS.gene31842:intron | 30.0% | |
| TCAAGTAGAATCAATTCTAG+AGG | + | chr1.1:14633983-14634002 | MS.gene31842:intron | 30.0% | |
| TCAATCTCAAATTGCTACAA+AGG | - | chr1.1:14635541-14635560 | None:intergenic | 30.0% | |
| TCCATACAATTCAAAGAATC+AGG | + | chr1.1:14638202-14638221 | MS.gene31842:CDS | 30.0% | |
| TCCTGATTCTTTGAATTGTA+TGG | - | chr1.1:14638206-14638225 | None:intergenic | 30.0% | |
| TCTGCACATATATATGTTTG+TGG | + | chr1.1:14638060-14638079 | MS.gene31842:CDS | 30.0% | |
| TGAACTTCTTGAAACATTTC+TGG | + | chr1.1:14638550-14638569 | MS.gene31842:CDS | 30.0% | |
| TGATCAGTATTATAAACTGC+TGG | - | chr1.1:14636339-14636358 | None:intergenic | 30.0% | |
| TGCAATTTATACTCCTATCT+TGG | - | chr1.1:14636251-14636270 | None:intergenic | 30.0% | |
| TTCTCTGACATTAAGCAATA+AGG | - | chr1.1:14637800-14637819 | None:intergenic | 30.0% | |
| TTGCACATTTCAACTACTTA+TGG | + | chr1.1:14638437-14638456 | MS.gene31842:CDS | 30.0% | |
| TTTATACTCCTATCTTGGAA+TGG | - | chr1.1:14636246-14636265 | None:intergenic | 30.0% | |
| ! | AGAAAATTTTCACTCGGAAA+GGG | + | chr1.1:14638005-14638024 | MS.gene31842:intron | 30.0% |
| ! | CAAATCAGGGTTCAAAATTT+TGG | - | chr1.1:14634925-14634944 | None:intergenic | 30.0% |
| ! | CAAGTAAAGAGATTTGGAAT+TGG | - | chr1.1:14637090-14637109 | None:intergenic | 30.0% |
| ! | CGATATTTCTGAGTATAAGA+AGG | - | chr1.1:14638329-14638348 | None:intergenic | 30.0% |
| ! | GAGACTTCAATAACCTTTTA+TGG | + | chr1.1:14637359-14637378 | MS.gene31842:intron | 30.0% |
| ! | GAGTGAAAATTTTCTGTTGA+AGG | - | chr1.1:14638000-14638019 | None:intergenic | 30.0% |
| ! | GCCGAATTGGAAAATTATTT+TGG | + | chr1.1:14636272-14636291 | MS.gene31842:CDS | 30.0% |
| ! | GCGTAGCAAATACAAATTTT+TGG | + | chr1.1:14634572-14634591 | MS.gene31842:intron | 30.0% |
| ! | TATTTGCTACGCTTACTATT+CGG | - | chr1.1:14634564-14634583 | None:intergenic | 30.0% |
| ! | TGGGATTCTGTTTTCTTTTT+TGG | + | chr1.1:14635953-14635972 | MS.gene31842:intron | 30.0% |
| ! | TTCAAGAAGTTCATGTGTTT+TGG | - | chr1.1:14638543-14638562 | None:intergenic | 30.0% |
| !! | ATATTTATTCTTTGGGTTGC+AGG | + | chr1.1:14636572-14636591 | MS.gene31842:intron | 30.0% |
| !! | CTTTGAGGATTTTTGTTTCT+GGG | + | chr1.1:14638914-14638933 | MS.gene31842:CDS | 30.0% |
| !! | TGAAAAGTGCTAAAAGAACA+AGG | - | chr1.1:14637283-14637302 | None:intergenic | 30.0% |
| !! | TGATTTGAATTTTGGTCTGT+TGG | + | chr1.1:14634938-14634957 | MS.gene31842:intron | 30.0% |
| !! | TTGAACCCTGATTTGAATTT+TGG | + | chr1.1:14634930-14634949 | MS.gene31842:intron | 30.0% |
| !!! | GTTTTTTTGAGATCTTCTCT+TGG | - | chr1.1:14636187-14636206 | None:intergenic | 30.0% |
| !!! | TCTTTTGGGATAATTGATTC+AGG | - | chr1.1:14634719-14634738 | None:intergenic | 30.0% |
| AACACCATAGATACTAGTCA+AGG | + | chr1.1:14637437-14637456 | MS.gene31842:intron | 35.0% | |
| AAGAAAGGAAACTACAGCAA+TGG | + | chr1.1:14638849-14638868 | MS.gene31842:CDS | 35.0% | |
| AAGGATAAGGACACATATCA+GGG | + | chr1.1:14636703-14636722 | MS.gene31842:CDS | 35.0% | |
| AAGGGAAAGTGATTTATGTC+TGG | + | chr1.1:14633886-14633905 | MS.gene31842:intron | 35.0% | |
| AATTATCGCAAAAGAAGGGT+TGG | + | chr1.1:14634495-14634514 | MS.gene31842:intron | 35.0% | |
| ACAACAATACAAACCCACTT+GGG | - | chr1.1:14635382-14635401 | None:intergenic | 35.0% | |
| ACATATGTAAACGACAGGAA+TGG | + | chr1.1:14636598-14636617 | MS.gene31842:CDS | 35.0% | |
| ACCTGAATGAAGTTGACAAT+CGG | - | chr1.1:14634885-14634904 | None:intergenic | 35.0% | |
| ACTATCTAGGTACTAAACCA+TGG | + | chr1.1:14638649-14638668 | MS.gene31842:CDS | 35.0% | |
| AGGATGGAAAATTGTAAGCA+AGG | - | chr1.1:14636316-14636335 | None:intergenic | 35.0% | |
| AGTTGAAATGTGCAATTCGA+TGG | - | chr1.1:14638432-14638451 | None:intergenic | 35.0% | |
| ATAAGTGATTATCACAGGAG+TGG | + | chr1.1:14638156-14638175 | MS.gene31842:CDS | 35.0% | |
| ATGCTTCTAGTAACATCACT+TGG | + | chr1.1:14636815-14636834 | MS.gene31842:CDS | 35.0% | |
| ATGGTTTAGTACCTAGATAG+TGG | - | chr1.1:14638650-14638669 | None:intergenic | 35.0% | |
| ATTACAGCAAATTTCGTCTC+TGG | + | chr1.1:14638262-14638281 | MS.gene31842:CDS | 35.0% | |
| ATTGCTGTAGTTTCCTTTCT+TGG | - | chr1.1:14638850-14638869 | None:intergenic | 35.0% | |
| CACATATTCCATTCCAAGAT+AGG | + | chr1.1:14636235-14636254 | MS.gene31842:CDS | 35.0% | |
| CACGGTATACCTAAATTTGA+TGG | + | chr1.1:14636376-14636395 | MS.gene31842:intron | 35.0% | |
| CAGATCTGAATGTTGAAGAA+AGG | + | chr1.1:14637551-14637570 | MS.gene31842:intron | 35.0% | |
| CTAAATTAGCCCACTCAAAT+TGG | + | chr1.1:14635281-14635300 | MS.gene31842:intron | 35.0% | |
| CTAATCATCTATCTAAGGAC+AGG | - | chr1.1:14634854-14634873 | None:intergenic | 35.0% | |
| CTAGTTAACTCCATGTATAC+TGG | - | chr1.1:14637949-14637968 | None:intergenic | 35.0% | |
| CTGGTTAAAATTGAGCTGAA+GGG | + | chr1.1:14633868-14633887 | MS.gene31842:intron | 35.0% | |
| CTTTATGTCATCCACTATCT+AGG | + | chr1.1:14638636-14638655 | MS.gene31842:CDS | 35.0% | |
| CTTTCTTCAACATTCAGATC+TGG | - | chr1.1:14637553-14637572 | None:intergenic | 35.0% | |
| GATAGTTCACATGAACCAAT+AGG | - | chr1.1:14637192-14637211 | None:intergenic | 35.0% | |
| GTATAAATTGCAAGCCGAAT+TGG | + | chr1.1:14636259-14636278 | MS.gene31842:CDS | 35.0% | |
| TAGCTTGACCCACAAAAAAT+TGG | - | chr1.1:14635457-14635476 | None:intergenic | 35.0% | |
| TATCTATGAGAAAGTCCAAG+CGG | - | chr1.1:14636116-14636135 | None:intergenic | 35.0% | |
| TATTATAAACTGCTGGAGGA+TGG | - | chr1.1:14636332-14636351 | None:intergenic | 35.0% | |
| TCAACTATGAAAGAGATTGG+TGG | + | chr1.1:14634286-14634305 | MS.gene31842:intron | 35.0% | |
| TCAGTATTATAAACTGCTGG+AGG | - | chr1.1:14636336-14636355 | None:intergenic | 35.0% | |
| TCCAAATCTCTTTACTTGCA+AGG | + | chr1.1:14637092-14637111 | MS.gene31842:CDS | 35.0% | |
| TCCTTGCAAGTAAAGAGATT+TGG | - | chr1.1:14637096-14637115 | None:intergenic | 35.0% | |
| TCGTATTCATTCAAGAGATC+AGG | + | chr1.1:14637648-14637667 | MS.gene31842:intron | 35.0% | |
| TCTGGTTAAAATTGAGCTGA+AGG | + | chr1.1:14633867-14633886 | MS.gene31842:intron | 35.0% | |
| TCTTCTTCATCTATCCATTC+TGG | - | chr1.1:14636853-14636872 | None:intergenic | 35.0% | |
| TCTTTGATGCCAATTTGAGT+GGG | - | chr1.1:14635293-14635312 | None:intergenic | 35.0% | |
| TGAACTATCAGTTCCTTTGA+AGG | + | chr1.1:14637203-14637222 | MS.gene31842:CDS | 35.0% | |
| TGCTTCTAGTAACATCACTT+GGG | + | chr1.1:14636816-14636835 | MS.gene31842:CDS | 35.0% | |
| TTGCGAATCATGGAAAATAG+CGG | - | chr1.1:14636471-14636490 | None:intergenic | 35.0% | |
| TTTCCTATGGCTGATATTTC+AGG | - | chr1.1:14638369-14638388 | None:intergenic | 35.0% | |
| ! | AAATTTTCACATGGTGGCAT+CGG | + | chr1.1:14638514-14638533 | MS.gene31842:CDS | 35.0% |
| ! | CAGAAAATTTTCACTCGGAA+AGG | + | chr1.1:14638004-14638023 | MS.gene31842:intron | 35.0% |
| ! | GCGTAGCAAACACAAATTTT+TGG | + | chr1.1:14634343-14634362 | MS.gene31842:intron | 35.0% |
| ! | GGTTTAATCTTTAGCTTAGC+TGG | + | chr1.1:14634959-14634978 | MS.gene31842:intron | 35.0% |
| ! | TAGTGGATGACATAAAGGAT+TGG | - | chr1.1:14638633-14638652 | None:intergenic | 35.0% |
| ! | TGTTACTAGAAGCATAGTTC+AGG | - | chr1.1:14636810-14636829 | None:intergenic | 35.0% |
| ! | TGTTTGCTACGCTTACTATT+CGG | - | chr1.1:14634335-14634354 | None:intergenic | 35.0% |
| ! | TTCCTGTCGTTTACATATGT+AGG | - | chr1.1:14636598-14636617 | None:intergenic | 35.0% |
| ! | TTCTTGAAACATTTCTGGGA+AGG | + | chr1.1:14638555-14638574 | MS.gene31842:CDS | 35.0% |
| !! | ATGTTTGGTTCCACTTTTAG+AGG | - | chr1.1:14634081-14634100 | None:intergenic | 35.0% |
| !! | CAATGTTTGTTTTCCCAACT+CGG | + | chr1.1:14637583-14637602 | MS.gene31842:intron | 35.0% |
| !! | CTAGATAGTGGATGACATAA+AGG | - | chr1.1:14638638-14638657 | None:intergenic | 35.0% |
| !! | TTACACCTCTAGAATCAGTT+TGG | + | chr1.1:14634052-14634071 | MS.gene31842:intron | 35.0% |
| !!! | GCTTTGAGGATTTTTGTTTC+TGG | + | chr1.1:14638913-14638932 | MS.gene31842:CDS | 35.0% |
| !!! | TTTTGGTTCTAAATGGTGCT+AGG | + | chr1.1:14634589-14634608 | MS.gene31842:intron | 35.0% |
| !!! | TTTTGGTTCTAATTGGTGCT+AGG | + | chr1.1:14634360-14634379 | MS.gene31842:intron | 35.0% |
| AACCGAAAAAGAAACGTGTG+CGG | - | chr1.1:14637728-14637747 | None:intergenic | 40.0% | |
| AACTCGGAGATGTTGCTAAT+TGG | + | chr1.1:14637599-14637618 | MS.gene31842:intron | 40.0% | |
| AAGGATATTATGCAGCGTGA+CGG | + | chr1.1:14637111-14637130 | MS.gene31842:CDS | 40.0% | |
| AATGCTACACTGTTCAACTC+AGG | + | chr1.1:14638390-14638409 | MS.gene31842:CDS | 40.0% | |
| AATTAGCAACATCTCCGAGT+TGG | - | chr1.1:14637600-14637619 | None:intergenic | 40.0% | |
| ACACTAGGTTGTAACAAGCA+TGG | + | chr1.1:14633640-14633659 | MS.gene31842:intron | 40.0% | |
| ACAGCAATAAGATCAAGACG+TGG | - | chr1.1:14636931-14636950 | None:intergenic | 40.0% | |
| ACCGATTGTCAACTTCATTC+AGG | + | chr1.1:14634881-14634900 | MS.gene31842:intron | 40.0% | |
| ACTACACTCATTGCACTTTC+AGG | - | chr1.1:14635099-14635118 | None:intergenic | 40.0% | |
| ACTCGGAGATGTTGCTAATT+GGG | + | chr1.1:14637600-14637619 | MS.gene31842:intron | 40.0% | |
| ACTGAGTTTATTAGGGGACA+TGG | + | chr1.1:14635910-14635929 | MS.gene31842:intron | 40.0% | |
| ACTGTTCAACTCAGGTGTAA+TGG | + | chr1.1:14638398-14638417 | MS.gene31842:CDS | 40.0% | |
| ATGAAAGTGAGATTGACCAC+TGG | + | chr1.1:14636746-14636765 | MS.gene31842:CDS | 40.0% | |
| ATGCCTGAAATATCAGCCAT+AGG | + | chr1.1:14638363-14638382 | MS.gene31842:CDS | 40.0% | |
| ATGTCTTAGTGCGTTCCATA+AGG | + | chr1.1:14637878-14637897 | MS.gene31842:intron | 40.0% | |
| ATTAGCAACATCTCCGAGTT+GGG | - | chr1.1:14637599-14637618 | None:intergenic | 40.0% | |
| ATTGGGAAAATGACCAGTGT+AGG | + | chr1.1:14637617-14637636 | MS.gene31842:intron | 40.0% | |
| CACAACAATACAAACCCACT+TGG | - | chr1.1:14635383-14635402 | None:intergenic | 40.0% | |
| CACATGAACCAATAGGTAAC+TGG | - | chr1.1:14637185-14637204 | None:intergenic | 40.0% | |
| CAGAATAGTACGAGTAAGCA+TGG | + | chr1.1:14635732-14635751 | MS.gene31842:intron | 40.0% | |
| CAGTGTAGCATTGTTTCCTA+TGG | - | chr1.1:14638382-14638401 | None:intergenic | 40.0% | |
| CATATATATGTGCAGAGTGC+AGG | - | chr1.1:14638056-14638075 | None:intergenic | 40.0% | |
| CATTCGAATACTTTGAGCTG+CGG | - | chr1.1:14638094-14638113 | None:intergenic | 40.0% | |
| CGTGGCTAATCATCTATCTA+AGG | - | chr1.1:14634859-14634878 | None:intergenic | 40.0% | |
| CTCTTTGATGCCAATTTGAG+TGG | - | chr1.1:14635294-14635313 | None:intergenic | 40.0% | |
| CTGAGTTTATTAGGGGACAT+GGG | + | chr1.1:14635911-14635930 | MS.gene31842:intron | 40.0% | |
| GAAGGATAAGGACACATATC+AGG | + | chr1.1:14636702-14636721 | MS.gene31842:CDS | 40.0% | |
| GACACCTTGACTAGTATCTA+TGG | - | chr1.1:14637444-14637463 | None:intergenic | 40.0% | |
| GAGATTGTATCCTACAATGG+TGG | + | chr1.1:14638471-14638490 | MS.gene31842:CDS | 40.0% | |
| GGATTGTTGCATAAGCTTCT+CGG | - | chr1.1:14638035-14638054 | None:intergenic | 40.0% | |
| GTGTTGTCAATTGCGAATCA+TGG | - | chr1.1:14636481-14636500 | None:intergenic | 40.0% | |
| TAATCTCGGAAACAAAGCCA+TGG | - | chr1.1:14638669-14638688 | None:intergenic | 40.0% | |
| TACCACAGTTACTATGCTGT+CGG | + | chr1.1:14635171-14635190 | MS.gene31842:intron | 40.0% | |
| TACGAATTAATGCCCTACAC+TGG | - | chr1.1:14637633-14637652 | None:intergenic | 40.0% | |
| TAGCTATAGGCATCTATGCA+AGG | - | chr1.1:14636016-14636035 | None:intergenic | 40.0% | |
| TATCCCAAAAGAAGGGTTAG+AGG | + | chr1.1:14634727-14634746 | MS.gene31842:intron | 40.0% | |
| TATGAAACACGGACACTCTT+TGG | + | chr1.1:14633491-14633510 | MS.gene31842:intron | 40.0% | |
| TGCAGAAGTTCTGTTTGCTT+AGG | + | chr1.1:14638784-14638803 | MS.gene31842:CDS | 40.0% | |
| TGGATGACATAAAGGATTGG+TGG | - | chr1.1:14638630-14638649 | None:intergenic | 40.0% | |
| TTATGGAACGCACTAAGACA+TGG | - | chr1.1:14637879-14637898 | None:intergenic | 40.0% | |
| TTCCACTCGTTATATGCTTC+TGG | - | chr1.1:14638243-14638262 | None:intergenic | 40.0% | |
| TTGGGAAAATGACCAGTGTA+GGG | + | chr1.1:14637618-14637637 | MS.gene31842:intron | 40.0% | |
| ! | AACCAGAAGCATATAACGAG+TGG | + | chr1.1:14638238-14638257 | MS.gene31842:CDS | 40.0% |
| ! | ACTCCTCTAACCCTTCTTTT+GGG | - | chr1.1:14634733-14634752 | None:intergenic | 40.0% |
| ! | AGTTTGGTCTCCTCTAAAAG+TGG | + | chr1.1:14634068-14634087 | MS.gene31842:intron | 40.0% |
| ! | CAGAACTTCTGCAAGTTTTC+TGG | - | chr1.1:14638777-14638796 | None:intergenic | 40.0% |
| ! | GAGAGTATGTTATGGCATTG+GGG | + | chr1.1:14638936-14638955 | MS.gene31842:CDS | 40.0% |
| ! | GCTCAAAGTATTCGAATGTC+TGG | + | chr1.1:14638096-14638115 | MS.gene31842:CDS | 40.0% |
| ! | GGAGAGTATGTTATGGCATT+GGG | + | chr1.1:14638935-14638954 | MS.gene31842:CDS | 40.0% |
| ! | GTTTCTGGGAGAGTATGTTA+TGG | + | chr1.1:14638928-14638947 | MS.gene31842:CDS | 40.0% |
| ! | TCAAAGCACGTTTTCAAACG+CGG | - | chr1.1:14638900-14638919 | None:intergenic | 40.0% |
| ! | TCAGTTCCTTTGAAGGCTAA+AGG | + | chr1.1:14637210-14637229 | MS.gene31842:CDS | 40.0% |
| ! | TGCATTTTTCCGCAATGTCA+AGG | - | chr1.1:14637313-14637332 | None:intergenic | 40.0% |
| !! | AAAGAGTGTCCGTGTTTCAT+AGG | - | chr1.1:14633492-14633511 | None:intergenic | 40.0% |
| !! | TATAGCGGTTACTCTGAAGT+TGG | + | chr1.1:14633717-14633736 | MS.gene31842:intron | 40.0% |
| !!! | GATTTAGTTTTGACAGCAGC+AGG | - | chr1.1:14639005-14639024 | None:intergenic | 40.0% |
| !!! | TATGCTTCTGGTTCTGCTTT+TGG | - | chr1.1:14638231-14638250 | None:intergenic | 40.0% |
| AAGGACACATATCAGGGTGT+TGG | + | chr1.1:14636709-14636728 | MS.gene31842:CDS | 45.0% | |
| AATACTTTGAGCTGCGGTGA+TGG | - | chr1.1:14638088-14638107 | None:intergenic | 45.0% | |
| AGGATATTATGCAGCGTGAC+GGG | + | chr1.1:14637112-14637131 | MS.gene31842:CDS | 45.0% | |
| ATCCGACAGCATAGTAACTG+TGG | - | chr1.1:14635176-14635195 | None:intergenic | 45.0% | |
| ATGCACTGGATGAAACCCTT+TGG | - | chr1.1:14637043-14637062 | None:intergenic | 45.0% | |
| CAATACAAACCCACTTGGGT+TGG | - | chr1.1:14635378-14635397 | None:intergenic | 45.0% | |
| CAATGCAATTGCAGCTGCAT+CGG | - | chr1.1:14637337-14637356 | None:intergenic | 45.0% | |
| CAATGCGAACCTTGACATTG+CGG | + | chr1.1:14637301-14637320 | MS.gene31842:intron | 45.0% | |
| CACGCTTTCAAGAGCCATAT+TGG | - | chr1.1:14637904-14637923 | None:intergenic | 45.0% | |
| CGGTTAGTAGTTAGCGATGT+GGG | - | chr1.1:14637773-14637792 | None:intergenic | 45.0% | |
| CTACTTGTCCAACACTACCT+AGG | + | chr1.1:14636887-14636906 | MS.gene31842:CDS | 45.0% | |
| CTCTCTGAGTTTATGCAGGT+CGG | - | chr1.1:14637157-14637176 | None:intergenic | 45.0% | |
| CTTCACTGCATCCAATAGAG+AGG | - | chr1.1:14636158-14636177 | None:intergenic | 45.0% | |
| GAAACTACAGCAATGGTCAC+TGG | + | chr1.1:14638856-14638875 | MS.gene31842:CDS | 45.0% | |
| GAAGGGTTGGAACTTAGAAG+AGG | + | chr1.1:14634508-14634527 | MS.gene31842:intron | 45.0% | |
| GAGAAGCTCCAGTTACCTAT+TGG | + | chr1.1:14637174-14637193 | MS.gene31842:CDS | 45.0% | |
| GCATAGAACAACCACAGTTG+CGG | - | chr1.1:14637388-14637407 | None:intergenic | 45.0% | |
| GCGTTTGAAAACGTGCTTTG+AGG | + | chr1.1:14638899-14638918 | MS.gene31842:CDS | 45.0% | |
| GCTTCTCTCTGAGTTTATGC+AGG | - | chr1.1:14637161-14637180 | None:intergenic | 45.0% | |
| GGCCTACATATGTAAACGAC+AGG | + | chr1.1:14636593-14636612 | MS.gene31842:intron | 45.0% | |
| GGGAAGACTTGTATCCAGAA+TGG | + | chr1.1:14636836-14636855 | MS.gene31842:CDS | 45.0% | |
| GGTTGGAACTTAGAAGAGGT+TGG | + | chr1.1:14634512-14634531 | MS.gene31842:intron | 45.0% | |
| GTTCAACTCAGGTGTAATGG+TGG | + | chr1.1:14638401-14638420 | MS.gene31842:CDS | 45.0% | |
| TAGGCATCTATGCAAGGACA+AGG | - | chr1.1:14636010-14636029 | None:intergenic | 45.0% | |
| TCCAACACTACCTAGGATTC+AGG | + | chr1.1:14636894-14636913 | MS.gene31842:CDS | 45.0% | |
| TCCAGTTGCAGTCGTAATCT+CGG | - | chr1.1:14638683-14638702 | None:intergenic | 45.0% | |
| TCGGTTAGTAGTTAGCGATG+TGG | - | chr1.1:14637774-14637793 | None:intergenic | 45.0% | |
| TCTCTGAGTTTATGCAGGTC+GGG | - | chr1.1:14637156-14637175 | None:intergenic | 45.0% | |
| TGATTATCACAGGAGTGGCT+TGG | + | chr1.1:14638161-14638180 | MS.gene31842:CDS | 45.0% | |
| TGCGTTCCATAAGGCCAATA+TGG | + | chr1.1:14637887-14637906 | MS.gene31842:intron | 45.0% | |
| TGGAACTTAGAAGAGGTTGG+TGG | + | chr1.1:14634515-14634534 | MS.gene31842:intron | 45.0% | |
| TTTGCTTAGGTCGAAGCAGA+AGG | + | chr1.1:14638797-14638816 | MS.gene31842:CDS | 45.0% | |
| ! | AAGAAACGTGTGCGGCTTTT+AGG | - | chr1.1:14637720-14637739 | None:intergenic | 45.0% |
| ! | ACGGACACTCTTTGGATTAG+AGG | + | chr1.1:14633499-14633518 | MS.gene31842:intron | 45.0% |
| ! | AGATCAAGACGTGGTTTTCC+TGG | - | chr1.1:14636922-14636941 | None:intergenic | 45.0% |
| ! | AGCCGCACACGTTTCTTTTT+CGG | + | chr1.1:14637723-14637742 | MS.gene31842:intron | 45.0% |
| ! | CAAAGCACGTTTTCAAACGC+GGG | - | chr1.1:14638899-14638918 | None:intergenic | 45.0% |
| ! | CACTCCTCTAACCCTTCTTT+TGG | - | chr1.1:14634734-14634753 | None:intergenic | 45.0% |
| ! | CTAGGTAGTGTTGGACAAGT+AGG | - | chr1.1:14636889-14636908 | None:intergenic | 45.0% |
| ! | GGAGACCAAACTGATTCTAG+AGG | - | chr1.1:14634060-14634079 | None:intergenic | 45.0% |
| ! | GGGAGAGTATGTTATGGCAT+TGG | + | chr1.1:14638934-14638953 | MS.gene31842:CDS | 45.0% |
| ! | GTCACGAAAAGTACATGCAC+TGG | - | chr1.1:14637057-14637076 | None:intergenic | 45.0% |
| ! | TAGAAGCATAGTTCAGGCGA+AGG | - | chr1.1:14636804-14636823 | None:intergenic | 45.0% |
| ! | TCCTGACCTTTAGCCTTCAA+AGG | - | chr1.1:14637219-14637238 | None:intergenic | 45.0% |
| ! | TCCTTTGAAGGCTAAAGGTC+AGG | + | chr1.1:14637215-14637234 | MS.gene31842:intron | 45.0% |
| !! | CAAGAGCCATATTGGCCTTA+TGG | - | chr1.1:14637896-14637915 | None:intergenic | 45.0% |
| !! | CTTCTGCAAGTTTTCTGGCA+TGG | - | chr1.1:14638772-14638791 | None:intergenic | 45.0% |
| !! | GAAGTTGATAATCGGTGACG+TGG | - | chr1.1:14633275-14633294 | None:intergenic | 45.0% |
| !!! | TTAGTTTTGACAGCAGCAGG+TGG | - | chr1.1:14639002-14639021 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTTTTAAGAATTT+GGG | - | chr1.1:14637683-14637702 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTAAGAATT+TGG | - | chr1.1:14637684-14637703 | None:intergenic | 5.0% |
| AACGCGTGATCTCGTGATTC+TGG | + | chr1.1:14638122-14638141 | MS.gene31842:CDS | 50.0% | |
| ACAGTTGCGGCAGCCATAAA+AGG | - | chr1.1:14637375-14637394 | None:intergenic | 50.0% | |
| AGGACTACATGCTCAGCTTC+TGG | - | chr1.1:14636784-14636803 | None:intergenic | 50.0% | |
| AGGCGACGAGGATGAGAAAA+AGG | + | chr1.1:14638575-14638594 | MS.gene31842:CDS | 50.0% | |
| GAAGTTGACAATCGGTGACG+TGG | - | chr1.1:14634877-14634896 | None:intergenic | 50.0% | |
| GAATCGAACCTGAGACCTCA+AGG | + | chr1.1:14635313-14635332 | MS.gene31842:intron | 50.0% | |
| GATCGTAGACAGGCCAAGAA+AGG | + | chr1.1:14638834-14638853 | MS.gene31842:CDS | 50.0% | |
| GCCTGAATCCTAGGTAGTGT+TGG | - | chr1.1:14636898-14636917 | None:intergenic | 50.0% | |
| GCGACGAAAACTCGTCTCTT+TGG | + | chr1.1:14638597-14638616 | MS.gene31842:CDS | 50.0% | |
| GTCCCAAGCCAATTACCACT+AGG | + | chr1.1:14635352-14635371 | MS.gene31842:intron | 50.0% | |
| GTTAGAGTGGGATCGTAGAC+AGG | + | chr1.1:14638824-14638843 | MS.gene31842:CDS | 50.0% | |
| TAATCGGTGACGTGGCTCAA+CGG | - | chr1.1:14633267-14633286 | None:intergenic | 50.0% | |
| TCCGAGATTACGACTGCAAC+TGG | + | chr1.1:14638679-14638698 | MS.gene31842:CDS | 50.0% | |
| TGGAGTGCACTCTGTAAGCA+AGG | + | chr1.1:14635129-14635148 | MS.gene31842:intron | 50.0% | |
| TGGCCTAGTGGTAATTGGCT+TGG | - | chr1.1:14635358-14635377 | None:intergenic | 50.0% | |
| TTACGACTGCAACTGGAACG+TGG | + | chr1.1:14638686-14638705 | MS.gene31842:CDS | 50.0% | |
| TTCATTGGAGCGGACACACT+AGG | + | chr1.1:14633625-14633644 | MS.gene31842:intron | 50.0% | |
| TTTCCTGGTGCCTGAATCCT+AGG | - | chr1.1:14636907-14636926 | None:intergenic | 50.0% | |
| ! | ATCCTACAATGGTGGTGACC+AGG | + | chr1.1:14638479-14638498 | MS.gene31842:CDS | 50.0% |
| ! | CTGCTTCTTTTGTTGCCGCT+TGG | + | chr1.1:14636098-14636117 | MS.gene31842:intron | 50.0% |
| ! | GGCATTGGGGTGACAAGAAT+TGG | + | chr1.1:14638949-14638968 | MS.gene31842:CDS | 50.0% |
| ! | GGCCTAGTGGTAATTGGCTT+GGG | - | chr1.1:14635357-14635376 | None:intergenic | 50.0% |
| ! | GTCTTGCTGCTTCAATCTGC+AGG | - | chr1.1:14637008-14637027 | None:intergenic | 50.0% |
| ! | TCCTACAATGGTGGTGACCA+GGG | + | chr1.1:14638480-14638499 | MS.gene31842:CDS | 50.0% |
| ! | TTTTATGGCTGCCGCAACTG+TGG | + | chr1.1:14637374-14637393 | MS.gene31842:intron | 50.0% |
| !! | AGACTTGCTGCGACTTCCAA+AGG | + | chr1.1:14637024-14637043 | MS.gene31842:CDS | 50.0% |
| !! | GACTTGCTGCGACTTCCAAA+GGG | + | chr1.1:14637025-14637044 | MS.gene31842:CDS | 50.0% |
| !! | TGGGTTGGCCTAGTGGTAAT+TGG | - | chr1.1:14635363-14635382 | None:intergenic | 50.0% |
| !! | TGGTAATTGGCTTGGGACCT+GGG | - | chr1.1:14635350-14635369 | None:intergenic | 50.0% |
| AAGCTTCCCTGCGACAAGTC+AGG | + | chr1.1:14636952-14636971 | MS.gene31842:CDS | 55.0% | |
| ACCACTAGGCCAACCCAAGT+GGG | + | chr1.1:14635366-14635385 | MS.gene31842:intron | 55.0% | |
| ACCCTGGTCACCACCATTGT+AGG | - | chr1.1:14638484-14638503 | None:intergenic | 55.0% | |
| AGCAGAAGGCAGCGTTAGAG+TGG | + | chr1.1:14638811-14638830 | MS.gene31842:CDS | 55.0% | |
| AGCTTCCCTGCGACAAGTCA+GGG | + | chr1.1:14636953-14636972 | MS.gene31842:CDS | 55.0% | |
| ATGAAGCGCGGATACGGACA+CGG | - | chr1.1:14633610-14633629 | None:intergenic | 55.0% | |
| ATGTAGCTCATGCGAGGTGG+TGG | + | chr1.1:14638733-14638752 | MS.gene31842:CDS | 55.0% | |
| CAGGTCGGGTTCATAAAGCC+AGG | - | chr1.1:14637142-14637161 | None:intergenic | 55.0% | |
| CGAGCAATGTAGCTCATGCG+AGG | + | chr1.1:14638727-14638746 | MS.gene31842:CDS | 55.0% | |
| CTACCTAGGATTCAGGCACC+AGG | + | chr1.1:14636901-14636920 | MS.gene31842:CDS | 55.0% | |
| CTGGAACGTGGACATTCTGC+AGG | + | chr1.1:14638698-14638717 | MS.gene31842:CDS | 55.0% | |
| CTGGTACTAGCTGCTTCCAG+TGG | - | chr1.1:14636765-14636784 | None:intergenic | 55.0% | |
| GCAATGTAGCTCATGCGAGG+TGG | + | chr1.1:14638730-14638749 | MS.gene31842:CDS | 55.0% | |
| GCAGAAGGCAGCGTTAGAGT+GGG | + | chr1.1:14638812-14638831 | MS.gene31842:CDS | 55.0% | |
| GCGAGCGGACCTATGAAACA+CGG | + | chr1.1:14633480-14633499 | MS.gene31842:intron | 55.0% | |
| GCTCCAATGAAGCGCGGATA+CGG | - | chr1.1:14633616-14633635 | None:intergenic | 55.0% | |
| GTATCCGCGCTTCATTGGAG+CGG | + | chr1.1:14633615-14633634 | MS.gene31842:intron | 55.0% | |
| TACCACTAGGCCAACCCAAG+TGG | + | chr1.1:14635365-14635384 | MS.gene31842:intron | 55.0% | |
| TAGACGCTCGAGCGCATTAG+TGG | + | chr1.1:14635072-14635091 | MS.gene31842:intron | 55.0% | |
| TCGAACCTGAGACCTCAAGG+AGG | + | chr1.1:14635316-14635335 | MS.gene31842:intron | 55.0% | |
| TGACGTGGCTCAACGGTGTT+AGG | - | chr1.1:14633260-14633279 | None:intergenic | 55.0% | |
| TGTCCGTATCCGCGCTTCAT+TGG | + | chr1.1:14633610-14633629 | MS.gene31842:intron | 55.0% | |
| ! | ACATTTCTGGGAAGGCGACG+AGG | + | chr1.1:14638563-14638582 | MS.gene31842:CDS | 55.0% |
| ! | ACGTGGCTCAACGGTGTTAG+GGG | - | chr1.1:14633258-14633277 | None:intergenic | 55.0% |
| ! | GACGTGGCTCAACGGTGTTA+GGG | - | chr1.1:14633259-14633278 | None:intergenic | 55.0% |
| !! | GTGGTAATTGGCTTGGGACC+TGG | - | chr1.1:14635351-14635370 | None:intergenic | 55.0% |
| CGAGTGCATAGCAGAGCGAG+CGG | + | chr1.1:14633465-14633484 | MS.gene31842:intron | 60.0% | |
| CGCTCTGCTATGCACTCGAG+CGG | - | chr1.1:14633463-14633482 | None:intergenic | 60.0% | |
| GTGCTCCTCCTTGAGGTCTC+AGG | - | chr1.1:14635324-14635343 | None:intergenic | 60.0% | |
| GTGTCCGCTCCAATGAAGCG+CGG | - | chr1.1:14633622-14633641 | None:intergenic | 60.0% | |
| ! | GGCTCAACGGTGTTAGGGGT+GGG | - | chr1.1:14633254-14633273 | None:intergenic | 60.0% |
| ! | TCAAGGAGGAGCACACTCCC+AGG | + | chr1.1:14635330-14635349 | MS.gene31842:intron | 60.0% |
| ! | TGGCTCAACGGTGTTAGGGG+TGG | - | chr1.1:14633255-14633274 | None:intergenic | 60.0% |
| ! | TGGGAGTGTGCTCCTCCTTG+AGG | - | chr1.1:14635331-14635350 | None:intergenic | 60.0% |
| !! | ACCCACTTGGGTTGGCCTAG+TGG | - | chr1.1:14635370-14635389 | None:intergenic | 60.0% |
| !! | AGCTCATGCGAGGTGGTGGA+AGG | + | chr1.1:14638737-14638756 | MS.gene31842:CDS | 60.0% |
| ! | AGGAGTGGCTTGGCAGCAGC+TGG | + | chr1.1:14638171-14638190 | MS.gene31842:CDS | 65.0% |
| ! | CAGCGCCCTGACTTGTCGCA+GGG | - | chr1.1:14636961-14636980 | None:intergenic | 65.0% |
| ! | GTGGCTTGGCAGCAGCTGGA+TGG | + | chr1.1:14638175-14638194 | MS.gene31842:CDS | 65.0% |
| ! | TGCAGCGTGACGGGAATGCC+TGG | + | chr1.1:14637121-14637140 | MS.gene31842:CDS | 65.0% |
| CCTGCGACAAGTCAGGGCGC+TGG | + | chr1.1:14636959-14636978 | MS.gene31842:CDS | 70.0% | |
| ! | CCAGCGCCCTGACTTGTCGC+AGG | - | chr1.1:14636962-14636981 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 14633242 | 14639040 | 14633242 | ID=MS.gene31842 |
| chr1.1 | mRNA | 14633242 | 14639040 | 14633242 | ID=MS.gene31842.t1;Parent=MS.gene31842 |
| chr1.1 | exon | 14633242 | 14633303 | 14633242 | ID=MS.gene31842.t1.exon1;Parent=MS.gene31842.t1 |
| chr1.1 | CDS | 14633242 | 14633303 | 14633242 | ID=cds.MS.gene31842.t1;Parent=MS.gene31842.t1 |
| chr1.1 | exon | 14636173 | 14636379 | 14636173 | ID=MS.gene31842.t1.exon2;Parent=MS.gene31842.t1 |
| chr1.1 | CDS | 14636173 | 14636379 | 14636173 | ID=cds.MS.gene31842.t1;Parent=MS.gene31842.t1 |
| chr1.1 | exon | 14636594 | 14637231 | 14636594 | ID=MS.gene31842.t1.exon3;Parent=MS.gene31842.t1 |
| chr1.1 | CDS | 14636594 | 14637231 | 14636594 | ID=cds.MS.gene31842.t1;Parent=MS.gene31842.t1 |
| chr1.1 | exon | 14638007 | 14639040 | 14638007 | ID=MS.gene31842.t1.exon4;Parent=MS.gene31842.t1 |
| chr1.1 | CDS | 14638007 | 14639040 | 14638007 | ID=cds.MS.gene31842.t1;Parent=MS.gene31842.t1 |
| Gene Sequence |
| Protein sequence |