Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31857.t1 | XP_013466435.1 | 84.2 | 411 | 52 | 1 | 1 | 411 | 1 | 398 | 9.20E-190 | 672.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31857.t1 | Q8GYX8 | 51.5 | 334 | 143 | 3 | 1 | 329 | 1 | 320 | 7.9e-89 | 328.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31857.t1 | A0A072VFV7 | 84.2 | 411 | 52 | 1 | 1 | 411 | 1 | 398 | 6.6e-190 | 672.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene010354 | MS.gene31857 | PPI |
| MS.gene92388 | MS.gene31857 | PPI |
| MS.gene90510 | MS.gene31857 | PPI |
| MS.gene047628 | MS.gene31857 | PPI |
| MS.gene31857 | MS.gene40413 | PPI |
| MS.gene99200 | MS.gene31857 | PPI |
| MS.gene56778 | MS.gene31857 | PPI |
| MS.gene071680 | MS.gene31857 | PPI |
| MS.gene041083 | MS.gene31857 | PPI |
| MS.gene92387 | MS.gene31857 | PPI |
| MS.gene015154 | MS.gene31857 | PPI |
| MS.gene046974 | MS.gene31857 | PPI |
| MS.gene011817 | MS.gene31857 | PPI |
| MS.gene024992 | MS.gene31857 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31857.t1 | MTR_1g029460 | 88.321 | 411 | 35 | 1 | 1 | 411 | 1 | 398 | 0.0 | 747 |
| MS.gene31857.t1 | MTR_1g029470 | 76.845 | 393 | 73 | 4 | 1 | 389 | 1 | 379 | 0.0 | 574 |
| MS.gene31857.t1 | MTR_8g037810 | 52.439 | 328 | 134 | 4 | 1 | 321 | 1 | 313 | 1.94e-104 | 313 |
| MS.gene31857.t1 | MTR_5g004570 | 55.508 | 236 | 97 | 2 | 1 | 236 | 1 | 228 | 1.04e-87 | 266 |
| MS.gene31857.t1 | MTR_5g004600 | 48.315 | 89 | 44 | 2 | 234 | 321 | 3 | 90 | 1.66e-19 | 85.9 |
| MS.gene31857.t1 | MTR_3g027580 | 47.297 | 74 | 38 | 1 | 6 | 78 | 89 | 162 | 4.16e-14 | 73.9 |
| MS.gene31857.t1 | MTR_4g023470 | 50.000 | 68 | 34 | 0 | 7 | 74 | 87 | 154 | 4.87e-14 | 73.9 |
| MS.gene31857.t1 | MTR_7g109340 | 37.895 | 95 | 52 | 1 | 7 | 94 | 27 | 121 | 1.70e-13 | 71.6 |
| MS.gene31857.t1 | MTR_2g014480 | 43.662 | 71 | 39 | 1 | 6 | 75 | 4 | 74 | 1.74e-13 | 71.6 |
| MS.gene31857.t1 | MTR_3g108020 | 41.584 | 101 | 47 | 4 | 5 | 93 | 3 | 103 | 8.05e-13 | 69.3 |
| MS.gene31857.t1 | MTR_8g006430 | 49.296 | 71 | 32 | 2 | 5 | 75 | 13 | 79 | 1.39e-12 | 69.3 |
| MS.gene31857.t1 | MTR_5g065860 | 37.363 | 91 | 57 | 0 | 1 | 91 | 43 | 133 | 4.16e-12 | 63.9 |
| MS.gene31857.t1 | MTR_4g080350 | 44.776 | 67 | 37 | 0 | 2 | 68 | 68 | 134 | 7.59e-12 | 66.6 |
| MS.gene31857.t1 | MTR_5g012530 | 49.275 | 69 | 32 | 1 | 6 | 71 | 12 | 80 | 7.76e-12 | 67.4 |
| MS.gene31857.t1 | MTR_2g083920 | 43.750 | 64 | 36 | 0 | 6 | 69 | 70 | 133 | 1.04e-11 | 65.5 |
| MS.gene31857.t1 | MTR_4g015840 | 42.254 | 71 | 40 | 1 | 6 | 75 | 4 | 74 | 2.03e-11 | 65.1 |
| MS.gene31857.t1 | MTR_5g065160 | 46.970 | 66 | 35 | 0 | 4 | 69 | 81 | 146 | 3.01e-11 | 65.5 |
| MS.gene31857.t1 | MTR_5g065160 | 46.970 | 66 | 35 | 0 | 4 | 69 | 74 | 139 | 3.19e-11 | 65.1 |
| MS.gene31857.t1 | MTR_5g065160 | 46.970 | 66 | 35 | 0 | 4 | 69 | 80 | 145 | 3.20e-11 | 65.1 |
| MS.gene31857.t1 | MTR_5g065160 | 46.970 | 66 | 35 | 0 | 4 | 69 | 81 | 146 | 3.21e-11 | 65.1 |
| MS.gene31857.t1 | MTR_2g083920 | 43.750 | 64 | 36 | 0 | 6 | 69 | 70 | 133 | 3.44e-11 | 64.7 |
| MS.gene31857.t1 | MTR_2g104030 | 35.714 | 98 | 55 | 2 | 5 | 95 | 69 | 165 | 4.67e-11 | 64.7 |
| MS.gene31857.t1 | MTR_4g023490 | 46.377 | 69 | 36 | 1 | 6 | 74 | 16 | 83 | 5.14e-11 | 64.3 |
| MS.gene31857.t1 | MTR_4g078850 | 40.845 | 71 | 41 | 1 | 6 | 75 | 4 | 74 | 8.94e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31857.t1 | AT1G77020 | 59.398 | 399 | 132 | 8 | 1 | 389 | 1 | 379 | 1.95e-152 | 436 |
| MS.gene31857.t1 | AT1G76700 | 48.533 | 375 | 165 | 5 | 1 | 361 | 1 | 361 | 3.42e-115 | 342 |
| MS.gene31857.t1 | AT1G21080 | 47.493 | 379 | 161 | 6 | 1 | 361 | 1 | 359 | 1.84e-113 | 337 |
| MS.gene31857.t1 | AT1G21080 | 47.480 | 377 | 160 | 6 | 1 | 359 | 1 | 357 | 1.53e-112 | 335 |
| MS.gene31857.t1 | AT2G21510 | 49.853 | 339 | 142 | 5 | 1 | 327 | 1 | 323 | 1.75e-99 | 300 |
| MS.gene31857.t1 | AT2G21510 | 49.853 | 339 | 142 | 5 | 1 | 327 | 1 | 323 | 1.75e-99 | 300 |
| MS.gene31857.t1 | AT2G21510 | 47.368 | 361 | 161 | 5 | 1 | 348 | 1 | 345 | 2.35e-99 | 300 |
| MS.gene31857.t1 | AT2G21510 | 47.368 | 361 | 161 | 5 | 1 | 348 | 1 | 345 | 2.35e-99 | 300 |
| MS.gene31857.t1 | AT2G21510 | 50.151 | 331 | 139 | 4 | 1 | 321 | 1 | 315 | 7.22e-99 | 298 |
| MS.gene31857.t1 | AT4G39150 | 49.695 | 328 | 143 | 4 | 1 | 321 | 1 | 313 | 2.73e-96 | 292 |
| MS.gene31857.t1 | AT4G39150 | 49.695 | 328 | 143 | 4 | 1 | 321 | 1 | 313 | 2.73e-96 | 292 |
| MS.gene31857.t1 | AT4G39150 | 49.695 | 328 | 143 | 4 | 1 | 321 | 1 | 313 | 2.73e-96 | 292 |
| MS.gene31857.t1 | AT1G21080 | 43.448 | 290 | 127 | 5 | 90 | 361 | 2 | 272 | 1.32e-68 | 219 |
| MS.gene31857.t1 | AT5G48030 | 50.000 | 66 | 33 | 0 | 6 | 71 | 94 | 159 | 8.59e-14 | 73.2 |
| MS.gene31857.t1 | AT5G25530 | 38.318 | 107 | 50 | 3 | 6 | 96 | 4 | 110 | 1.24e-13 | 72.0 |
| MS.gene31857.t1 | AT3G62600 | 32.353 | 102 | 59 | 1 | 7 | 98 | 27 | 128 | 4.07e-12 | 67.4 |
| MS.gene31857.t1 | AT5G06910 | 47.059 | 68 | 36 | 0 | 4 | 71 | 27 | 94 | 5.04e-12 | 66.6 |
| MS.gene31857.t1 | AT1G59980 | 35.484 | 93 | 51 | 1 | 8 | 91 | 25 | 117 | 5.68e-12 | 67.4 |
| MS.gene31857.t1 | AT1G59980 | 35.484 | 93 | 51 | 1 | 8 | 91 | 25 | 117 | 6.11e-12 | 67.0 |
| MS.gene31857.t1 | AT1G80030 | 38.144 | 97 | 52 | 2 | 6 | 95 | 75 | 170 | 6.32e-12 | 67.8 |
| MS.gene31857.t1 | AT1G80030 | 38.144 | 97 | 52 | 2 | 6 | 95 | 75 | 170 | 6.32e-12 | 67.8 |
| MS.gene31857.t1 | AT1G80030 | 38.144 | 97 | 52 | 2 | 6 | 95 | 75 | 170 | 6.32e-12 | 67.8 |
| MS.gene31857.t1 | AT1G80030 | 38.144 | 97 | 52 | 2 | 6 | 95 | 75 | 170 | 6.60e-12 | 67.4 |
| MS.gene31857.t1 | AT4G28480 | 45.070 | 71 | 38 | 1 | 6 | 75 | 4 | 74 | 1.07e-11 | 65.9 |
| MS.gene31857.t1 | AT5G25530 | 36.522 | 115 | 49 | 4 | 6 | 96 | 4 | 118 | 1.10e-11 | 66.2 |
| MS.gene31857.t1 | AT5G01390 | 39.189 | 74 | 44 | 1 | 5 | 77 | 3 | 76 | 1.22e-11 | 64.7 |
| MS.gene31857.t1 | AT5G01390 | 39.726 | 73 | 43 | 1 | 6 | 77 | 4 | 76 | 1.29e-11 | 64.7 |
| MS.gene31857.t1 | AT4G28480 | 45.070 | 71 | 38 | 1 | 6 | 75 | 4 | 74 | 1.44e-11 | 65.9 |
| MS.gene31857.t1 | AT3G12170 | 45.588 | 68 | 37 | 0 | 4 | 71 | 9 | 76 | 2.30e-11 | 64.3 |
| MS.gene31857.t1 | AT1G28210 | 44.444 | 63 | 35 | 0 | 7 | 69 | 49 | 111 | 2.36e-11 | 65.5 |
| MS.gene31857.t1 | AT1G28210 | 44.444 | 63 | 35 | 0 | 7 | 69 | 49 | 111 | 2.41e-11 | 65.5 |
| MS.gene31857.t1 | AT1G28210 | 44.444 | 63 | 35 | 0 | 7 | 69 | 49 | 111 | 2.62e-11 | 65.5 |
| MS.gene31857.t1 | AT5G01390 | 39.726 | 73 | 43 | 1 | 6 | 77 | 4 | 76 | 2.76e-11 | 64.3 |
| MS.gene31857.t1 | AT3G12170 | 45.588 | 68 | 37 | 0 | 4 | 71 | 45 | 112 | 3.40e-11 | 64.3 |
| MS.gene31857.t1 | AT2G20560 | 43.662 | 71 | 39 | 1 | 6 | 75 | 4 | 74 | 3.48e-11 | 64.7 |
| MS.gene31857.t1 | AT1G59725 | 39.726 | 73 | 42 | 1 | 6 | 76 | 4 | 76 | 3.82e-11 | 64.3 |
| MS.gene31857.t1 | AT5G01390 | 39.726 | 73 | 43 | 1 | 6 | 77 | 4 | 76 | 4.24e-11 | 64.3 |
| MS.gene31857.t1 | AT3G08910 | 41.667 | 72 | 41 | 1 | 6 | 76 | 4 | 75 | 4.31e-11 | 64.3 |
| MS.gene31857.t1 | AT2G42750 | 37.931 | 87 | 53 | 1 | 6 | 91 | 76 | 162 | 7.35e-11 | 63.5 |
Find 81 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATCTGGGAGTCCCATTTC+TGG | 0.137224 | 1.4:+14534948 | MS.gene31857:CDS |
| GTTGCATCATTGGCTTCTTC+TGG | 0.226049 | 1.4:+14534082 | MS.gene31857:CDS |
| AATTCTTGGGAAAATATTTC+AGG | 0.228989 | 1.4:+14535689 | MS.gene31857:CDS |
| AGAAATGTGTATGATCAAAA+TGG | 0.260886 | 1.4:+14533189 | MS.gene31857:CDS |
| ACAGTCTTCGCCCAGCTCTT+TGG | 0.279248 | 1.4:+14534022 | MS.gene31857:CDS |
| GCTACCGCTCTTAAAATTCT+TGG | 0.291362 | 1.4:+14535675 | MS.gene31857:CDS |
| TAACGCTGCACACAAATTTC+AGG | 0.307752 | 1.4:+14532994 | MS.gene31857:CDS |
| TTTGATCGGTTAGTGCTCTA+TGG | 0.315268 | 1.4:-14536046 | None:intergenic |
| TTTGCAGTAAGGGACATTAT+TGG | 0.328132 | 1.4:+14534980 | MS.gene31857:CDS |
| CGCTCTGATAGAAACCCTTT+TGG | 0.338237 | 1.4:-14534341 | None:intergenic |
| TTTGGTCACCACAAACATAT+TGG | 0.347971 | 1.4:-14534323 | None:intergenic |
| GAAATGGGACTCCCAGATAA+AGG | 0.353949 | 1.4:-14534945 | None:intergenic |
| GCATCTAGATGTTGCATCAT+TGG | 0.354932 | 1.4:+14534072 | MS.gene31857:CDS |
| GAGTCCCATTTCTGGCTGAA+TGG | 0.358469 | 1.4:+14534956 | MS.gene31857:CDS |
| AGTCCCATTTCTGGCTGAAT+GGG | 0.372261 | 1.4:+14534957 | MS.gene31857:CDS |
| CAAACCCATTCAGCCAGAAA+TGG | 0.375178 | 1.4:-14534961 | None:intergenic |
| ACTCAGCAAGCAATCTGAAA+TGG | 0.390884 | 1.4:+14535170 | MS.gene31857:CDS |
| CTTTGGAAGTGGATTGTTTG+AGG | 0.392294 | 1.4:+14534039 | MS.gene31857:CDS |
| AGCTGGGCGAAGACTGTCAT+TGG | 0.394025 | 1.4:-14534016 | None:intergenic |
| GTGCAGCGTTAGGATCGTTT+TGG | 0.398701 | 1.4:-14532982 | None:intergenic |
| TGAAATTTGTGTGCAGCGTT+AGG | 0.402877 | 1.4:-14532992 | None:intergenic |
| TCTTCTATTGCAGGTGCTAA+AGG | 0.408026 | 1.4:+14535617 | MS.gene31857:intron |
| GGCTGAATGGGTTTGCAGTA+AGG | 0.408826 | 1.4:+14534969 | MS.gene31857:CDS |
| TATGGGTAGGCTCTTCAAAA+AGG | 0.409420 | 1.4:+14536212 | MS.gene31857:CDS |
| AATATAAATGTCTCCTGATC+AGG | 0.411024 | 1.4:-14535231 | None:intergenic |
| CTACCGCTCTTAAAATTCTT+GGG | 0.413442 | 1.4:+14535676 | MS.gene31857:CDS |
| TTCGCCCAGCTCTTTGGAAG+TGG | 0.420361 | 1.4:+14534028 | MS.gene31857:CDS |
| ATGGGAAGAATTCTGTATCT+AGG | 0.432976 | 1.4:+14533208 | MS.gene31857:CDS |
| CATTTATATTGAATTCTTTG+TGG | 0.433120 | 1.4:+14535244 | MS.gene31857:CDS |
| TTTCTCAACCAATATGTTTG+TGG | 0.434290 | 1.4:+14534315 | MS.gene31857:CDS |
| AGCTTTGCGAATTTGATCAT+TGG | 0.435421 | 1.4:-14532818 | None:intergenic |
| TCATACACATTTCTCTGTAC+TGG | 0.438520 | 1.4:-14533180 | None:intergenic |
| ATATGTTTGTGGTGACCAAA+AGG | 0.440721 | 1.4:+14534326 | MS.gene31857:CDS |
| ATGAGAAAGCCGTCTTGCTT+CGG | 0.447397 | 1.4:-14534370 | None:intergenic |
| CTCACATATTCGTCCTGATC+AGG | 0.459025 | 1.4:+14535218 | MS.gene31857:CDS |
| ACAATCCACTTCCAAAGAGC+TGG | 0.461109 | 1.4:-14534033 | None:intergenic |
| CTTCAGGAAAAGAATTCAAA+AGG | 0.463938 | 1.4:+14535948 | MS.gene31857:intron |
| CTCAGCAAGCAATCTGAAAT+GGG | 0.470144 | 1.4:+14535171 | MS.gene31857:CDS |
| GAAATGTGTATGATCAAAAT+GGG | 0.476191 | 1.4:+14533190 | MS.gene31857:CDS |
| TCAAACTCCCTCTTTCAATC+AGG | 0.477081 | 1.4:+14536064 | MS.gene31857:CDS |
| TGCTTCTGCAGGGTATGGGT+AGG | 0.478733 | 1.4:+14536199 | MS.gene31857:intron |
| AAATGGGACTCCCAGATAAA+GGG | 0.481283 | 1.4:-14534944 | None:intergenic |
| TCATCAGCGAGTTTCTTCTT+CGG | 0.481509 | 1.4:-14535978 | None:intergenic |
| CAAAGCAAGTTCATCCTGAT+AGG | 0.482643 | 1.4:+14532957 | MS.gene31857:CDS |
| TATAGGCTGCCAAGAAAGAA+AGG | 0.486517 | 1.4:+14534262 | MS.gene31857:intron |
| TTGATCGGTTAGTGCTCTAT+GGG | 0.489796 | 1.4:-14536045 | None:intergenic |
| GCAAGACGGCTTTCTCATGC+AGG | 0.493184 | 1.4:+14534375 | MS.gene31857:CDS |
| CCTTGCACACGTGTGTCAAA+TGG | 0.501569 | 1.4:+14535296 | MS.gene31857:CDS |
| AGACAAGCAGCACAAGAGCT+AGG | 0.503103 | 1.4:+14534913 | MS.gene31857:CDS |
| GCTTCTTCTGGACTAGCTGA+TGG | 0.503703 | 1.4:+14534094 | MS.gene31857:CDS |
| GCTGAATGGGTTTGCAGTAA+GGG | 0.503737 | 1.4:+14534970 | MS.gene31857:CDS |
| AAACCCATTCAGCCAGAAAT+GGG | 0.505691 | 1.4:-14534960 | None:intergenic |
| GAAAGAGGAACTTCAAGGTC+GGG | 0.506574 | 1.4:+14535653 | MS.gene31857:CDS |
| TCTTGAATATATATAGCCTA+TGG | 0.506580 | 1.4:-14534893 | None:intergenic |
| TGCTAAAGGAAAACAACGTT+AGG | 0.507365 | 1.4:+14535631 | MS.gene31857:CDS |
| TATGTTTGTGGTGACCAAAA+GGG | 0.511742 | 1.4:+14534327 | MS.gene31857:CDS |
| GGAAAACAACGTTAGGAAAG+AGG | 0.518851 | 1.4:+14535638 | MS.gene31857:CDS |
| AGTTATCGTGAATGATGAAG+AGG | 0.519769 | 1.4:+14536239 | MS.gene31857:CDS |
| CTATCGTACCTGATTGAAAG+AGG | 0.524030 | 1.4:-14536072 | None:intergenic |
| GTAGTCAAGTTTGCTATGGA+AGG | 0.525511 | 1.4:-14536341 | None:intergenic |
| ATTGAAAGAGGGAGTTTGAT+CGG | 0.529107 | 1.4:-14536060 | None:intergenic |
| TCACAGTTTACAGCTGCTAA+AGG | 0.530943 | 1.4:+14535006 | MS.gene31857:CDS |
| TTTCTGCTTCTGCAGGGTAT+GGG | 0.531069 | 1.4:+14536195 | MS.gene31857:intron |
| CCATTTGACACACGTGTGCA+AGG | 0.531121 | 1.4:-14535296 | None:intergenic |
| GATTGTTTGAGGACTATGTT+GGG | 0.534330 | 1.4:+14534050 | MS.gene31857:CDS |
| GACAAGCAGCACAAGAGCTA+GGG | 0.548365 | 1.4:+14534914 | MS.gene31857:CDS |
| GCTGGGCGAAGACTGTCATT+GGG | 0.551388 | 1.4:-14534015 | None:intergenic |
| GTTAGGAAAGAGGAACTTCA+AGG | 0.560566 | 1.4:+14535648 | MS.gene31857:CDS |
| GGATTGTTTGAGGACTATGT+TGG | 0.573074 | 1.4:+14534049 | MS.gene31857:CDS |
| CAATCCACTTCCAAAGAGCT+GGG | 0.580204 | 1.4:-14534032 | None:intergenic |
| GCTGATGATTCTGATGATGA+AGG | 0.587114 | 1.4:+14535993 | MS.gene31857:CDS |
| TCGCAAAGCTTATTATCACA+AGG | 0.590412 | 1.4:+14532831 | MS.gene31857:CDS |
| CATTTGACACACGTGTGCAA+GGG | 0.593903 | 1.4:-14535295 | None:intergenic |
| TAGTCAAGTTTGCTATGGAA+GGG | 0.594637 | 1.4:-14536340 | None:intergenic |
| GGAAAGAGGAACTTCAAGGT+CGG | 0.607200 | 1.4:+14535652 | MS.gene31857:CDS |
| GTTGACATGTTACATACCAT+AGG | 0.628688 | 1.4:+14534877 | MS.gene31857:CDS |
| TGGACTAGCTGATGGAAGTG+AGG | 0.629403 | 1.4:+14534102 | MS.gene31857:CDS |
| GCGCAAAATCCGAAGCAAGA+CGG | 0.633395 | 1.4:+14534361 | MS.gene31857:CDS |
| TATCGTACCTGATTGAAAGA+GGG | 0.633970 | 1.4:-14536071 | None:intergenic |
| AGCAAGCAATCTGAAATGGG+TGG | 0.678875 | 1.4:+14535174 | MS.gene31857:CDS |
| AAGCAGAAGAAGAAACATCG+AGG | 0.749133 | 1.4:-14532795 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAAAGTTTACATGAT+TGG | + | chr1.4:14533425-14533444 | MS.gene31857:intron | 15.0% |
| !! | ATAAGCTATTTAATAAATTG+TGG | + | chr1.4:14534749-14534768 | MS.gene31857:intron | 15.0% |
| !! | TAAGCTATTTAATAAATTGT+GGG | + | chr1.4:14534750-14534769 | MS.gene31857:intron | 15.0% |
| !! | TTTCGCAAAATATTAAAATA+TGG | + | chr1.4:14533907-14533926 | MS.gene31857:intron | 15.0% |
| !!! | TTATTTTCTCATATTATTAC+TGG | + | chr1.4:14536113-14536132 | MS.gene31857:intron | 15.0% |
| !! | AATACATAGGTATTATAGAT+TGG | + | chr1.4:14533614-14533633 | MS.gene31857:intron | 20.0% |
| !! | CATAACCTGAAAATATAAAT+AGG | - | chr1.4:14534231-14534250 | None:intergenic | 20.0% |
| !! | CATTTATATTGAATTCTTTG+TGG | + | chr1.4:14535244-14535263 | MS.gene31857:CDS | 20.0% |
| !! | TGAGTATCAAATAACAAAAA+TGG | - | chr1.4:14533555-14533574 | None:intergenic | 20.0% |
| !!! | ACGATAGTTTTACATTTAAT+CGG | + | chr1.4:14536088-14536107 | MS.gene31857:intron | 20.0% |
| !!! | TAGTTGTTTCTTCAAATTTT+TGG | - | chr1.4:14535775-14535794 | None:intergenic | 20.0% |
| !!! | TTAAGAAGTATTTCGTTTAT+GGG | - | chr1.4:14535832-14535851 | None:intergenic | 20.0% |
| !!! | TTTAAGAAGTATTTCGTTTA+TGG | - | chr1.4:14535833-14535852 | None:intergenic | 20.0% |
| ! | AAGCTTAAAAGTTAAATGTG+GGG | - | chr1.4:14534481-14534500 | None:intergenic | 25.0% |
| ! | AATTCTTGGGAAAATATTTC+AGG | + | chr1.4:14535689-14535708 | MS.gene31857:CDS | 25.0% |
| ! | AGAAATGTGTATGATCAAAA+TGG | + | chr1.4:14533189-14533208 | MS.gene31857:CDS | 25.0% |
| ! | ATAAGAAGAAACTGACATTA+AGG | - | chr1.4:14535065-14535084 | None:intergenic | 25.0% |
| ! | ATACACTTTCTTATTGTTAC+AGG | + | chr1.4:14532934-14532953 | MS.gene31857:intron | 25.0% |
| ! | ATATTGTGCACATATCATTT+AGG | + | chr1.4:14535117-14535136 | MS.gene31857:intron | 25.0% |
| ! | ATTATGTAGAAATGATGGTT+TGG | + | chr1.4:14533270-14533289 | MS.gene31857:intron | 25.0% |
| ! | CAAGCTTAAAAGTTAAATGT+GGG | - | chr1.4:14534482-14534501 | None:intergenic | 25.0% |
| ! | CAATTCAACATTTCATCATA+TGG | - | chr1.4:14535457-14535476 | None:intergenic | 25.0% |
| ! | GAAAAGAGAAAAAGAAAACT+AGG | + | chr1.4:14533851-14533870 | MS.gene31857:intron | 25.0% |
| ! | GAAATGTGTATGATCAAAAT+GGG | + | chr1.4:14533190-14533209 | MS.gene31857:CDS | 25.0% |
| ! | GAGAAATTTGCATTGTATTT+AGG | - | chr1.4:14533820-14533839 | None:intergenic | 25.0% |
| ! | GATAACTAGTTAGTAATATC+CGG | - | chr1.4:14534832-14534851 | None:intergenic | 25.0% |
| ! | GCATAATATAGGAAATGAAA+AGG | + | chr1.4:14535572-14535591 | MS.gene31857:intron | 25.0% |
| ! | GCTATTGGTATGAAAATATA+AGG | + | chr1.4:14535425-14535444 | MS.gene31857:intron | 25.0% |
| ! | GGATATTACAATGTCAAAAT+TGG | + | chr1.4:14534678-14534697 | MS.gene31857:intron | 25.0% |
| ! | TAAGAAGAAACTGACATTAA+GGG | - | chr1.4:14535064-14535083 | None:intergenic | 25.0% |
| ! | TAATGTCAGTTTCTTCTTAT+TGG | + | chr1.4:14535065-14535084 | MS.gene31857:intron | 25.0% |
| ! | TATAGCATGTTATTGTATCA+AGG | + | chr1.4:14534657-14534676 | MS.gene31857:intron | 25.0% |
| ! | TATTACTGGTATCTATATGT+TGG | + | chr1.4:14536127-14536146 | MS.gene31857:intron | 25.0% |
| ! | TCAAGCTTAAAAGTTAAATG+TGG | - | chr1.4:14534483-14534502 | None:intergenic | 25.0% |
| ! | TCTTGAATATATATAGCCTA+TGG | - | chr1.4:14534896-14534915 | None:intergenic | 25.0% |
| ! | TTTCATTTCCTATATTATGC+TGG | - | chr1.4:14535572-14535591 | None:intergenic | 25.0% |
| !! | AAACAAGTGATAGTGAATTT+AGG | + | chr1.4:14535509-14535528 | MS.gene31857:intron | 25.0% |
| !! | AATATGTGAGTCAACATTTT+CGG | - | chr1.4:14535208-14535227 | None:intergenic | 25.0% |
| !! | GAAAAAACAGTTTTCACAAA+AGG | - | chr1.4:14535541-14535560 | None:intergenic | 25.0% |
| !! | TGTTTTTCGCATTGTAATTT+TGG | + | chr1.4:14534171-14534190 | MS.gene31857:intron | 25.0% |
| !!! | TATGTCATAGTTTTACATTG+TGG | - | chr1.4:14533767-14533786 | None:intergenic | 25.0% |
| AACAATTCTTTGTGCACATA+TGG | + | chr1.4:14535343-14535362 | MS.gene31857:intron | 30.0% | |
| AATATAAATGTCTCCTGATC+AGG | - | chr1.4:14535234-14535253 | None:intergenic | 30.0% | |
| ACTGATAAATCTTCTATTGC+AGG | + | chr1.4:14535608-14535627 | MS.gene31857:intron | 30.0% | |
| AGTAATATCCGGTGAAATAA+CGG | - | chr1.4:14534821-14534840 | None:intergenic | 30.0% | |
| ATGATCAACCAGCATAATAT+AGG | + | chr1.4:14535561-14535580 | MS.gene31857:intron | 30.0% | |
| CATATGGTAAAGTTGTTGAT+CGG | + | chr1.4:14535359-14535378 | MS.gene31857:intron | 30.0% | |
| CTCATCATTGTGACTATATT+AGG | - | chr1.4:14535883-14535902 | None:intergenic | 30.0% | |
| CTTACATTTCTCATCAAAAC+TGG | + | chr1.4:14534542-14534561 | MS.gene31857:intron | 30.0% | |
| CTTCAGGAAAAGAATTCAAA+AGG | + | chr1.4:14535948-14535967 | MS.gene31857:intron | 30.0% | |
| GCAAATTTCTCAAAATGAAC+AGG | + | chr1.4:14533829-14533848 | MS.gene31857:intron | 30.0% | |
| GCGATATTATGTAGAAATGA+TGG | + | chr1.4:14533265-14533284 | MS.gene31857:intron | 30.0% | |
| GTATTCTCTGATTTCGTATA+TGG | + | chr1.4:14533479-14533498 | MS.gene31857:intron | 30.0% | |
| GTTATGTTGTGCTTCAATAT+AGG | + | chr1.4:14534245-14534264 | MS.gene31857:intron | 30.0% | |
| TCACTTGTTTCAGATACATT+AGG | - | chr1.4:14535499-14535518 | None:intergenic | 30.0% | |
| TGAAAACATCTTCACCTTAA+GGG | - | chr1.4:14533950-14533969 | None:intergenic | 30.0% | |
| TGGATAACACTATAATGTAG+TGG | + | chr1.4:14534698-14534717 | MS.gene31857:intron | 30.0% | |
| TTTCTCAACCAATATGTTTG+TGG | + | chr1.4:14534315-14534334 | MS.gene31857:CDS | 30.0% | |
| ! | ATATGTGAGTCAACATTTTC+GGG | - | chr1.4:14535207-14535226 | None:intergenic | 30.0% |
| ! | CTTTTCTTTCCTTTCTTTCT+TGG | - | chr1.4:14534274-14534293 | None:intergenic | 30.0% |
| ! | GGAGACCTATTTATATTTTC+AGG | + | chr1.4:14534223-14534242 | MS.gene31857:intron | 30.0% |
| ! | TAAATATTTCTGCTTCTGCA+GGG | + | chr1.4:14536189-14536208 | MS.gene31857:intron | 30.0% |
| ! | TTAACAAACCGTTATTTCAC+CGG | + | chr1.4:14534810-14534829 | MS.gene31857:intron | 30.0% |
| ! | TTTTCATACCAATAGCTTCA+TGG | - | chr1.4:14535421-14535440 | None:intergenic | 30.0% |
| !! | CTATATGTTGGTGTTTTCAT+AGG | + | chr1.4:14536139-14536158 | MS.gene31857:intron | 30.0% |
| !! | GCTATTTTCATTGCTATTGT+GGG | + | chr1.4:14536303-14536322 | MS.gene31857:CDS | 30.0% |
| !! | TTTCCCAAGAATTTTAAGAG+CGG | - | chr1.4:14535682-14535701 | None:intergenic | 30.0% |
| !!! | TGCTATTTTCATTGCTATTG+TGG | + | chr1.4:14536302-14536321 | MS.gene31857:CDS | 30.0% |
| AAGAAACTGACATTAAGGGA+AGG | - | chr1.4:14535060-14535079 | None:intergenic | 35.0% | |
| AGAAACTGACATTAAGGGAA+GGG | - | chr1.4:14535059-14535078 | None:intergenic | 35.0% | |
| AGCTTCATGGTCTAAACAAA+AGG | - | chr1.4:14535408-14535427 | None:intergenic | 35.0% | |
| AGCTTTGCGAATTTGATCAT+TGG | - | chr1.4:14532821-14532840 | None:intergenic | 35.0% | |
| AGTTATCGTGAATGATGAAG+AGG | + | chr1.4:14536239-14536258 | MS.gene31857:CDS | 35.0% | |
| ATATGTTTGTGGTGACCAAA+AGG | + | chr1.4:14534326-14534345 | MS.gene31857:CDS | 35.0% | |
| ATGGGAAGAATTCTGTATCT+AGG | + | chr1.4:14533208-14533227 | MS.gene31857:CDS | 35.0% | |
| ATTGAAAGAGGGAGTTTGAT+CGG | - | chr1.4:14536063-14536082 | None:intergenic | 35.0% | |
| CACAAAATATGCTTCCCTTA+AGG | + | chr1.4:14533933-14533952 | MS.gene31857:intron | 35.0% | |
| CTACCGCTCTTAAAATTCTT+GGG | + | chr1.4:14535676-14535695 | MS.gene31857:CDS | 35.0% | |
| GAATTCTACCTGCATTTCTT+TGG | + | chr1.4:14534403-14534422 | MS.gene31857:intron | 35.0% | |
| GATTGTTTGAGGACTATGTT+GGG | + | chr1.4:14534050-14534069 | MS.gene31857:CDS | 35.0% | |
| GCAATATCAATGTAGCATAG+CGG | + | chr1.4:14534783-14534802 | MS.gene31857:intron | 35.0% | |
| GCATAAATCAGCATAGTTCA+TGG | - | chr1.4:14534599-14534618 | None:intergenic | 35.0% | |
| GTGAAAACATCTTCACCTTA+AGG | - | chr1.4:14533951-14533970 | None:intergenic | 35.0% | |
| GTTGACATGTTACATACCAT+AGG | + | chr1.4:14534877-14534896 | MS.gene31857:CDS | 35.0% | |
| TATCGTACCTGATTGAAAGA+GGG | - | chr1.4:14536074-14536093 | None:intergenic | 35.0% | |
| TATGTTTGTGGTGACCAAAA+GGG | + | chr1.4:14534327-14534346 | MS.gene31857:CDS | 35.0% | |
| TCATACACATTTCTCTGTAC+TGG | - | chr1.4:14533183-14533202 | None:intergenic | 35.0% | |
| TCGCAAAGCTTATTATCACA+AGG | + | chr1.4:14532831-14532850 | MS.gene31857:CDS | 35.0% | |
| TCGTTTATGGGATAGCAATT+TGG | - | chr1.4:14535820-14535839 | None:intergenic | 35.0% | |
| TGCTAAAGGAAAACAACGTT+AGG | + | chr1.4:14535631-14535650 | MS.gene31857:CDS | 35.0% | |
| TGTTTAGACCATGAAGCTAT+TGG | + | chr1.4:14535410-14535429 | MS.gene31857:intron | 35.0% | |
| TTCCTAACTTTCAGCTTTCT+AGG | + | chr1.4:14535741-14535760 | MS.gene31857:intron | 35.0% | |
| TTCCTAGAAAGCTGAAAGTT+AGG | - | chr1.4:14535746-14535765 | None:intergenic | 35.0% | |
| TTTGCAGTAAGGGACATTAT+TGG | + | chr1.4:14534980-14534999 | MS.gene31857:CDS | 35.0% | |
| TTTGGTCACCACAAACATAT+TGG | - | chr1.4:14534326-14534345 | None:intergenic | 35.0% | |
| ! | ATTTTCAAAAGAGCCTTTGC+TGG | + | chr1.4:14533584-14533603 | MS.gene31857:intron | 35.0% |
| ! | CACACAAATTTCAGGTATAG+AGG | + | chr1.4:14533002-14533021 | MS.gene31857:intron | 35.0% |
| ! | GAAATGATGGTTTGGACTAA+TGG | + | chr1.4:14533278-14533297 | MS.gene31857:intron | 35.0% |
| ! | GTAAATATTTCTGCTTCTGC+AGG | + | chr1.4:14536188-14536207 | MS.gene31857:intron | 35.0% |
| ! | TATGTGAGTCAACATTTTCG+GGG | - | chr1.4:14535206-14535225 | None:intergenic | 35.0% |
| ! | TCGCCTAAAACTAGTAGTTT+TGG | + | chr1.4:14533741-14533760 | MS.gene31857:intron | 35.0% |
| !! | GGATTTTCAGGAAAAGCTAA+AGG | + | chr1.4:14534123-14534142 | MS.gene31857:CDS | 35.0% |
| !! | TTTGGTGTCTGTATCTTTGT+CGG | + | chr1.4:14533369-14533388 | MS.gene31857:intron | 35.0% |
| !!! | TGCTGAGTTCTTTTTGAAGT+TGG | - | chr1.4:14535158-14535177 | None:intergenic | 35.0% |
| !!! | TGGCCAAAACTACTAGTTTT+AGG | - | chr1.4:14533747-14533766 | None:intergenic | 35.0% |
| AAACCCATTCAGCCAGAAAT+GGG | - | chr1.4:14534963-14534982 | None:intergenic | 40.0% | |
| AAATGGGACTCCCAGATAAA+GGG | - | chr1.4:14534947-14534966 | None:intergenic | 40.0% | |
| AAGCAATTGCACGATGTGTT+TGG | - | chr1.4:14534431-14534450 | None:intergenic | 40.0% | |
| AAGCAGAAGAAGAAACATCG+AGG | - | chr1.4:14532798-14532817 | None:intergenic | 40.0% | |
| ACTCAGCAAGCAATCTGAAA+TGG | + | chr1.4:14535170-14535189 | MS.gene31857:CDS | 40.0% | |
| AGGGAAAAATGCCCTTTATC+TGG | + | chr1.4:14534933-14534952 | MS.gene31857:CDS | 40.0% | |
| ATCATGAACCACAGCAACAA+AGG | - | chr1.4:14533685-14533704 | None:intergenic | 40.0% | |
| CAAAGCAAGTTCATCCTGAT+AGG | + | chr1.4:14532957-14532976 | MS.gene31857:CDS | 40.0% | |
| CAAGCATAGTTTCTCTGTCA+AGG | - | chr1.4:14533994-14534013 | None:intergenic | 40.0% | |
| CCAGACAAGAATTGTGACTT+AGG | - | chr1.4:14533642-14533661 | None:intergenic | 40.0% | |
| CCTAAGTCACAATTCTTGTC+TGG | + | chr1.4:14533639-14533658 | MS.gene31857:intron | 40.0% | |
| CTATCGTACCTGATTGAAAG+AGG | - | chr1.4:14536075-14536094 | None:intergenic | 40.0% | |
| GCATCTAGATGTTGCATCAT+TGG | + | chr1.4:14534072-14534091 | MS.gene31857:CDS | 40.0% | |
| GCTACCGCTCTTAAAATTCT+TGG | + | chr1.4:14535675-14535694 | MS.gene31857:CDS | 40.0% | |
| GGAAAACAACGTTAGGAAAG+AGG | + | chr1.4:14535638-14535657 | MS.gene31857:CDS | 40.0% | |
| GGAAACTCTGACATTTACTC+AGG | - | chr1.4:14533534-14533553 | None:intergenic | 40.0% | |
| GGATTGTTTGAGGACTATGT+TGG | + | chr1.4:14534049-14534068 | MS.gene31857:CDS | 40.0% | |
| GGGAAAAATGCCCTTTATCT+GGG | + | chr1.4:14534934-14534953 | MS.gene31857:CDS | 40.0% | |
| GTATCATGTAGCGTCATGTT+TGG | + | chr1.4:14533351-14533370 | MS.gene31857:intron | 40.0% | |
| GTTAGGAAAGAGGAACTTCA+AGG | + | chr1.4:14535648-14535667 | MS.gene31857:CDS | 40.0% | |
| TAAAGTGACGTGCTTACTTC+AGG | + | chr1.4:14535932-14535951 | MS.gene31857:intron | 40.0% | |
| TAACGCTGCACACAAATTTC+AGG | + | chr1.4:14532994-14533013 | MS.gene31857:CDS | 40.0% | |
| TATAGGCTGCCAAGAAAGAA+AGG | + | chr1.4:14534262-14534281 | MS.gene31857:intron | 40.0% | |
| TATGGGTAGGCTCTTCAAAA+AGG | + | chr1.4:14536212-14536231 | MS.gene31857:CDS | 40.0% | |
| TCAAACTCCCTCTTTCAATC+AGG | + | chr1.4:14536064-14536083 | MS.gene31857:CDS | 40.0% | |
| TCACAGTTTACAGCTGCTAA+AGG | + | chr1.4:14535006-14535025 | MS.gene31857:CDS | 40.0% | |
| TCATCAGCGAGTTTCTTCTT+CGG | - | chr1.4:14535981-14536000 | None:intergenic | 40.0% | |
| TCTTCTATTGCAGGTGCTAA+AGG | + | chr1.4:14535617-14535636 | MS.gene31857:intron | 40.0% | |
| TGAAATTTGTGTGCAGCGTT+AGG | - | chr1.4:14532995-14533014 | None:intergenic | 40.0% | |
| TGTATTAGCATAGCCAGCAA+AGG | - | chr1.4:14533600-14533619 | None:intergenic | 40.0% | |
| TTGATCGGTTAGTGCTCTAT+GGG | - | chr1.4:14536048-14536067 | None:intergenic | 40.0% | |
| TTTGATCGGTTAGTGCTCTA+TGG | - | chr1.4:14536049-14536068 | None:intergenic | 40.0% | |
| ! | AGAGAGCTCAGGTTATGTTT+TGG | + | chr1.4:14534202-14534221 | MS.gene31857:intron | 40.0% |
| ! | CTCAGCAAGCAATCTGAAAT+GGG | + | chr1.4:14535171-14535190 | MS.gene31857:CDS | 40.0% |
| ! | GCTGATGATTCTGATGATGA+AGG | + | chr1.4:14535993-14536012 | MS.gene31857:CDS | 40.0% |
| ! | TGATGGAAGTGAGGATTTTC+AGG | + | chr1.4:14534111-14534130 | MS.gene31857:CDS | 40.0% |
| ! | TGCTGGCTATGCTAATACAT+AGG | + | chr1.4:14533601-14533620 | MS.gene31857:intron | 40.0% |
| !! | CTTTGGAAGTGGATTGTTTG+AGG | + | chr1.4:14534039-14534058 | MS.gene31857:CDS | 40.0% |
| !! | TTTGGTGCTGTCATCAATCA+CGG | - | chr1.4:14535802-14535821 | None:intergenic | 40.0% |
| ACAATCCACTTCCAAAGAGC+TGG | - | chr1.4:14534036-14534055 | None:intergenic | 45.0% | |
| ATGAGAAAGCCGTCTTGCTT+CGG | - | chr1.4:14534373-14534392 | None:intergenic | 45.0% | |
| ATTTCTGCTTCTGCAGGGTA+TGG | + | chr1.4:14536194-14536213 | MS.gene31857:intron | 45.0% | |
| CAAACCCATTCAGCCAGAAA+TGG | - | chr1.4:14534964-14534983 | None:intergenic | 45.0% | |
| CAATCCACTTCCAAAGAGCT+GGG | - | chr1.4:14534035-14534054 | None:intergenic | 45.0% | |
| CATTTGACACACGTGTGCAA+GGG | - | chr1.4:14535298-14535317 | None:intergenic | 45.0% | |
| CTCACATATTCGTCCTGATC+AGG | + | chr1.4:14535218-14535237 | MS.gene31857:CDS | 45.0% | |
| GAAAGAGGAACTTCAAGGTC+GGG | + | chr1.4:14535653-14535672 | MS.gene31857:CDS | 45.0% | |
| GAAATGGGACTCCCAGATAA+AGG | - | chr1.4:14534948-14534967 | None:intergenic | 45.0% | |
| GGAAAGAGGAACTTCAAGGT+CGG | + | chr1.4:14535652-14535671 | MS.gene31857:CDS | 45.0% | |
| GTGTCTCTGTTTGCAGAGTT+TGG | + | chr1.4:14534853-14534872 | MS.gene31857:intron | 45.0% | |
| GTTTGGCACCAAAGAAATGC+AGG | - | chr1.4:14534414-14534433 | None:intergenic | 45.0% | |
| TGGTTAGACAAAGAGAGCTC+AGG | + | chr1.4:14534191-14534210 | MS.gene31857:intron | 45.0% | |
| TTATCTGGGAGTCCCATTTC+TGG | + | chr1.4:14534948-14534967 | MS.gene31857:CDS | 45.0% | |
| TTTCTGCTTCTGCAGGGTAT+GGG | + | chr1.4:14536195-14536214 | MS.gene31857:intron | 45.0% | |
| ! | AGCAAGCAATCTGAAATGGG+TGG | + | chr1.4:14535174-14535193 | MS.gene31857:CDS | 45.0% |
| ! | AGCATAGTTCATGGCTTGCA+AGG | - | chr1.4:14534590-14534609 | None:intergenic | 45.0% |
| ! | CGCTCTGATAGAAACCCTTT+TGG | - | chr1.4:14534344-14534363 | None:intergenic | 45.0% |
| ! | GCTGAATGGGTTTGCAGTAA+GGG | + | chr1.4:14534970-14534989 | MS.gene31857:CDS | 45.0% |
| ! | TTTTAGGCGACTCCATCGAT+CGG | - | chr1.4:14533731-14533750 | None:intergenic | 45.0% |
| !! | AGTCCCATTTCTGGCTGAAT+GGG | + | chr1.4:14534957-14534976 | MS.gene31857:CDS | 45.0% |
| !! | GTTGCATCATTGGCTTCTTC+TGG | + | chr1.4:14534082-14534101 | MS.gene31857:CDS | 45.0% |
| !!! | GGATCGTTTTGGTTCCTATC+AGG | - | chr1.4:14532974-14532993 | None:intergenic | 45.0% |
| AGACAAGCAGCACAAGAGCT+AGG | + | chr1.4:14534913-14534932 | MS.gene31857:CDS | 50.0% | |
| CCATTTGACACACGTGTGCA+AGG | - | chr1.4:14535299-14535318 | None:intergenic | 50.0% | |
| CCTTGCACACGTGTGTCAAA+TGG | + | chr1.4:14535296-14535315 | MS.gene31857:CDS | 50.0% | |
| GACAAGCAGCACAAGAGCTA+GGG | + | chr1.4:14534914-14534933 | MS.gene31857:CDS | 50.0% | |
| GCGCAAAATCCGAAGCAAGA+CGG | + | chr1.4:14534361-14534380 | MS.gene31857:CDS | 50.0% | |
| TGATTGTGAGTCCCGATCGA+TGG | + | chr1.4:14533716-14533735 | MS.gene31857:intron | 50.0% | |
| TTTAGGCGACTCCATCGATC+GGG | - | chr1.4:14533730-14533749 | None:intergenic | 50.0% | |
| ! | GGCTGAATGGGTTTGCAGTA+AGG | + | chr1.4:14534969-14534988 | MS.gene31857:CDS | 50.0% |
| ! | GTGCAGCGTTAGGATCGTTT+TGG | - | chr1.4:14532985-14533004 | None:intergenic | 50.0% |
| ! | TAGTTCATGGCTTGCAAGGC+AGG | - | chr1.4:14534586-14534605 | None:intergenic | 50.0% |
| !! | CGCATTAGCCTTTGTTGCTG+TGG | + | chr1.4:14533674-14533693 | MS.gene31857:intron | 50.0% |
| !! | GAGTCCCATTTCTGGCTGAA+TGG | + | chr1.4:14534956-14534975 | MS.gene31857:CDS | 50.0% |
| !! | GCTTCTTCTGGACTAGCTGA+TGG | + | chr1.4:14534094-14534113 | MS.gene31857:CDS | 50.0% |
| !! | TGGACTAGCTGATGGAAGTG+AGG | + | chr1.4:14534102-14534121 | MS.gene31857:CDS | 50.0% |
| ACAGTCTTCGCCCAGCTCTT+TGG | + | chr1.4:14534022-14534041 | MS.gene31857:CDS | 55.0% | |
| AGCTGGGCGAAGACTGTCAT+TGG | - | chr1.4:14534019-14534038 | None:intergenic | 55.0% | |
| GCAAGACGGCTTTCTCATGC+AGG | + | chr1.4:14534375-14534394 | MS.gene31857:CDS | 55.0% | |
| GCTGGGCGAAGACTGTCATT+GGG | - | chr1.4:14534018-14534037 | None:intergenic | 55.0% | |
| TGCTTCTGCAGGGTATGGGT+AGG | + | chr1.4:14536199-14536218 | MS.gene31857:intron | 55.0% | |
| ! | TTCGCCCAGCTCTTTGGAAG+TGG | + | chr1.4:14534028-14534047 | MS.gene31857:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 14532766 | 14536350 | 14532766 | ID=MS.gene31857 |
| chr1.4 | mRNA | 14532766 | 14536350 | 14532766 | ID=MS.gene31857.t1;Parent=MS.gene31857 |
| chr1.4 | exon | 14532766 | 14532852 | 14532766 | ID=MS.gene31857.t1.exon1;Parent=MS.gene31857.t1 |
| chr1.4 | CDS | 14532766 | 14532852 | 14532766 | ID=cds.MS.gene31857.t1;Parent=MS.gene31857.t1 |
| chr1.4 | exon | 14532956 | 14533015 | 14532956 | ID=MS.gene31857.t1.exon2;Parent=MS.gene31857.t1 |
| chr1.4 | CDS | 14532956 | 14533015 | 14532956 | ID=cds.MS.gene31857.t1;Parent=MS.gene31857.t1 |
| chr1.4 | exon | 14533147 | 14533229 | 14533147 | ID=MS.gene31857.t1.exon3;Parent=MS.gene31857.t1 |
| chr1.4 | CDS | 14533147 | 14533229 | 14533147 | ID=cds.MS.gene31857.t1;Parent=MS.gene31857.t1 |
| chr1.4 | exon | 14534000 | 14534183 | 14534000 | ID=MS.gene31857.t1.exon4;Parent=MS.gene31857.t1 |
| chr1.4 | CDS | 14534000 | 14534183 | 14534000 | ID=cds.MS.gene31857.t1;Parent=MS.gene31857.t1 |
| chr1.4 | exon | 14534267 | 14534396 | 14534267 | ID=MS.gene31857.t1.exon5;Parent=MS.gene31857.t1 |
| chr1.4 | CDS | 14534267 | 14534396 | 14534267 | ID=cds.MS.gene31857.t1;Parent=MS.gene31857.t1 |
| chr1.4 | exon | 14534869 | 14535027 | 14534869 | ID=MS.gene31857.t1.exon6;Parent=MS.gene31857.t1 |
| chr1.4 | CDS | 14534869 | 14535027 | 14534869 | ID=cds.MS.gene31857.t1;Parent=MS.gene31857.t1 |
| chr1.4 | exon | 14535139 | 14535317 | 14535139 | ID=MS.gene31857.t1.exon7;Parent=MS.gene31857.t1 |
| chr1.4 | CDS | 14535139 | 14535317 | 14535139 | ID=cds.MS.gene31857.t1;Parent=MS.gene31857.t1 |
| chr1.4 | exon | 14535630 | 14535710 | 14535630 | ID=MS.gene31857.t1.exon8;Parent=MS.gene31857.t1 |
| chr1.4 | CDS | 14535630 | 14535710 | 14535630 | ID=cds.MS.gene31857.t1;Parent=MS.gene31857.t1 |
| chr1.4 | exon | 14535954 | 14536085 | 14535954 | ID=MS.gene31857.t1.exon9;Parent=MS.gene31857.t1 |
| chr1.4 | CDS | 14535954 | 14536085 | 14535954 | ID=cds.MS.gene31857.t1;Parent=MS.gene31857.t1 |
| chr1.4 | exon | 14536210 | 14536350 | 14536210 | ID=MS.gene31857.t1.exon10;Parent=MS.gene31857.t1 |
| chr1.4 | CDS | 14536210 | 14536350 | 14536210 | ID=cds.MS.gene31857.t1;Parent=MS.gene31857.t1 |
| Gene Sequence |
| Protein sequence |
