Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011817.t1 | RHN42276.1 | 98.6 | 349 | 5 | 0 | 1 | 349 | 1 | 349 | 1.10E-199 | 705.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011817.t1 | Q8W034 | 36.6 | 186 | 101 | 2 | 2 | 170 | 4 | 189 | 7.4e-30 | 132.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011817.t1 | A0A396GMD3 | 98.6 | 349 | 5 | 0 | 1 | 349 | 1 | 349 | 8.3e-200 | 705.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene011817 | MS.gene031696 | PPI |
| MS.gene33522 | MS.gene011817 | PPI |
| MS.gene81954 | MS.gene011817 | PPI |
| MS.gene011817 | MS.gene02651 | PPI |
| MS.gene81957 | MS.gene011817 | PPI |
| MS.gene011817 | MS.gene013671 | PPI |
| MS.gene011817 | MS.gene006614 | PPI |
| MS.gene011817 | MS.gene81956 | PPI |
| MS.gene026672 | MS.gene011817 | PPI |
| MS.gene013678 | MS.gene011817 | PPI |
| MS.gene93157 | MS.gene011817 | PPI |
| MS.gene31858 | MS.gene011817 | PPI |
| MS.gene065946 | MS.gene011817 | PPI |
| MS.gene011817 | MS.gene33649 | PPI |
| MS.gene011817 | MS.gene02488 | PPI |
| MS.gene02655 | MS.gene011817 | PPI |
| MS.gene011817 | MS.gene02654 | PPI |
| MS.gene011817 | MS.gene33648 | PPI |
| MS.gene011817 | MS.gene045584 | PPI |
| MS.gene011817 | MS.gene31857 | PPI |
| MS.gene011817 | MS.gene038047 | PPI |
| MS.gene065947 | MS.gene011817 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011817.t1 | MTR_5g017280 | 80.286 | 350 | 58 | 3 | 1 | 349 | 1 | 340 | 0.0 | 553 |
| MS.gene011817.t1 | MTR_5g017280 | 80.286 | 350 | 58 | 3 | 1 | 349 | 1 | 340 | 0.0 | 553 |
| MS.gene011817.t1 | MTR_3g055990 | 36.408 | 206 | 115 | 4 | 5 | 197 | 7 | 209 | 2.21e-35 | 135 |
| MS.gene011817.t1 | MTR_3g055990 | 28.372 | 215 | 115 | 4 | 91 | 302 | 5 | 183 | 1.35e-19 | 90.1 |
| MS.gene011817.t1 | MTR_3g055990 | 36.408 | 206 | 115 | 4 | 5 | 197 | 7 | 209 | 2.47e-35 | 135 |
| MS.gene011817.t1 | MTR_3g055990 | 28.372 | 215 | 115 | 4 | 91 | 302 | 5 | 183 | 1.41e-19 | 90.1 |
| MS.gene011817.t1 | MTR_5g097580 | 38.265 | 196 | 105 | 5 | 5 | 187 | 7 | 199 | 1.34e-34 | 133 |
| MS.gene011817.t1 | MTR_5g097580 | 29.577 | 213 | 111 | 6 | 93 | 302 | 7 | 183 | 5.48e-18 | 85.5 |
| MS.gene011817.t1 | MTR_5g097580 | 36.735 | 196 | 108 | 4 | 5 | 187 | 7 | 199 | 1.39e-34 | 133 |
| MS.gene011817.t1 | MTR_5g097580 | 29.577 | 213 | 111 | 6 | 93 | 302 | 7 | 183 | 4.34e-18 | 85.9 |
| MS.gene011817.t1 | MTR_2g026180 | 36.408 | 206 | 112 | 5 | 1 | 191 | 1 | 202 | 2.29e-34 | 132 |
| MS.gene011817.t1 | MTR_1g073690 | 34.343 | 198 | 109 | 3 | 2 | 180 | 4 | 199 | 1.24e-30 | 122 |
| MS.gene011817.t1 | MTR_1g073690 | 28.507 | 221 | 128 | 5 | 93 | 312 | 7 | 198 | 1.85e-19 | 89.7 |
| MS.gene011817.t1 | MTR_3g103420 | 31.937 | 191 | 110 | 2 | 2 | 172 | 8 | 198 | 1.58e-25 | 106 |
| MS.gene011817.t1 | MTR_3g103420 | 31.364 | 220 | 122 | 4 | 93 | 310 | 11 | 203 | 2.85e-24 | 102 |
| MS.gene011817.t1 | MTR_6g004810 | 30.058 | 173 | 119 | 1 | 5 | 175 | 46 | 218 | 3.24e-25 | 105 |
| MS.gene011817.t1 | MTR_3g082650 | 29.167 | 168 | 117 | 1 | 5 | 170 | 19 | 186 | 1.32e-24 | 103 |
| MS.gene011817.t1 | MTR_8g463890 | 28.205 | 156 | 108 | 2 | 1 | 152 | 70 | 225 | 4.20e-16 | 79.7 |
| MS.gene011817.t1 | MTR_4g088010 | 27.119 | 177 | 128 | 1 | 3 | 179 | 75 | 250 | 7.06e-15 | 75.5 |
| MS.gene011817.t1 | MTR_4g052940 | 24.242 | 264 | 175 | 7 | 3 | 254 | 189 | 439 | 1.98e-13 | 71.6 |
| MS.gene011817.t1 | MTR_2g097960 | 25.797 | 345 | 214 | 13 | 2 | 326 | 13 | 335 | 2.74e-13 | 71.2 |
| MS.gene011817.t1 | MTR_3g075500 | 32.215 | 149 | 92 | 3 | 2 | 141 | 107 | 255 | 5.06e-13 | 68.9 |
| MS.gene011817.t1 | MTR_3g075500 | 32.215 | 149 | 92 | 3 | 2 | 141 | 107 | 255 | 5.77e-13 | 68.9 |
| MS.gene011817.t1 | MTR_2g026180 | 34.328 | 134 | 69 | 5 | 73 | 191 | 3 | 132 | 1.12e-12 | 69.3 |
| MS.gene011817.t1 | MTR_5g088220 | 21.118 | 161 | 119 | 2 | 4 | 156 | 165 | 325 | 1.15e-12 | 69.3 |
| MS.gene011817.t1 | MTR_7g088140 | 20.809 | 173 | 112 | 3 | 3 | 155 | 126 | 293 | 1.86e-12 | 68.6 |
| MS.gene011817.t1 | MTR_7g088140 | 20.833 | 168 | 118 | 3 | 3 | 155 | 126 | 293 | 2.86e-12 | 68.2 |
| MS.gene011817.t1 | MTR_1g045510 | 28.902 | 173 | 112 | 5 | 5 | 169 | 114 | 283 | 1.27e-11 | 65.1 |
| MS.gene011817.t1 | MTR_7g013730 | 36.145 | 83 | 51 | 1 | 1 | 81 | 37 | 119 | 1.42e-11 | 64.3 |
| MS.gene011817.t1 | MTR_2g022950 | 25.338 | 296 | 170 | 10 | 2 | 285 | 58 | 314 | 7.79e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene011817.t1 | AT4G36960 | 67.760 | 366 | 90 | 6 | 3 | 349 | 2 | 358 | 2.21e-169 | 478 |
| MS.gene011817.t1 | AT4G36960 | 67.760 | 366 | 90 | 6 | 3 | 349 | 2 | 358 | 2.21e-169 | 478 |
| MS.gene011817.t1 | AT5G55550 | 32.743 | 226 | 129 | 6 | 5 | 209 | 7 | 230 | 1.72e-35 | 135 |
| MS.gene011817.t1 | AT5G55550 | 30.916 | 262 | 141 | 9 | 91 | 346 | 5 | 232 | 1.39e-21 | 95.9 |
| MS.gene011817.t1 | AT5G55550 | 32.743 | 226 | 129 | 6 | 5 | 209 | 7 | 230 | 1.72e-35 | 135 |
| MS.gene011817.t1 | AT5G55550 | 30.916 | 262 | 141 | 9 | 91 | 346 | 5 | 232 | 1.39e-21 | 95.9 |
| MS.gene011817.t1 | AT5G55550 | 32.743 | 226 | 129 | 6 | 5 | 209 | 7 | 230 | 1.72e-35 | 135 |
| MS.gene011817.t1 | AT5G55550 | 30.916 | 262 | 141 | 9 | 91 | 346 | 5 | 232 | 1.39e-21 | 95.9 |
| MS.gene011817.t1 | AT5G55550 | 32.743 | 226 | 129 | 6 | 5 | 209 | 7 | 230 | 1.72e-35 | 135 |
| MS.gene011817.t1 | AT5G55550 | 30.916 | 262 | 141 | 9 | 91 | 346 | 5 | 232 | 1.39e-21 | 95.9 |
| MS.gene011817.t1 | AT5G55550 | 32.743 | 226 | 129 | 6 | 5 | 209 | 7 | 230 | 1.72e-35 | 135 |
| MS.gene011817.t1 | AT5G55550 | 30.916 | 262 | 141 | 9 | 91 | 346 | 5 | 232 | 1.39e-21 | 95.9 |
| MS.gene011817.t1 | AT5G55550 | 31.557 | 244 | 144 | 6 | 5 | 227 | 7 | 248 | 1.94e-35 | 135 |
| MS.gene011817.t1 | AT5G55550 | 30.916 | 262 | 141 | 9 | 91 | 346 | 5 | 232 | 1.04e-21 | 96.3 |
| MS.gene011817.t1 | AT5G55550 | 31.557 | 244 | 144 | 6 | 5 | 227 | 7 | 248 | 1.94e-35 | 135 |
| MS.gene011817.t1 | AT5G55550 | 30.916 | 262 | 141 | 9 | 91 | 346 | 5 | 232 | 1.04e-21 | 96.3 |
| MS.gene011817.t1 | AT5G55550 | 31.557 | 244 | 144 | 6 | 5 | 227 | 7 | 248 | 1.94e-35 | 135 |
| MS.gene011817.t1 | AT5G55550 | 30.916 | 262 | 141 | 9 | 91 | 346 | 5 | 232 | 1.04e-21 | 96.3 |
| MS.gene011817.t1 | AT5G55550 | 31.557 | 244 | 144 | 6 | 5 | 227 | 7 | 248 | 1.94e-35 | 135 |
| MS.gene011817.t1 | AT5G55550 | 30.916 | 262 | 141 | 9 | 91 | 346 | 5 | 232 | 1.04e-21 | 96.3 |
| MS.gene011817.t1 | AT4G26650 | 33.333 | 222 | 118 | 5 | 1 | 194 | 1 | 220 | 2.70e-34 | 132 |
| MS.gene011817.t1 | AT4G26650 | 33.810 | 210 | 117 | 4 | 5 | 194 | 16 | 223 | 4.13e-34 | 131 |
| MS.gene011817.t1 | AT3G07810 | 37.129 | 202 | 108 | 5 | 2 | 187 | 4 | 202 | 2.12e-33 | 130 |
| MS.gene011817.t1 | AT3G07810 | 37.129 | 202 | 108 | 5 | 2 | 187 | 4 | 202 | 2.28e-33 | 130 |
| MS.gene011817.t1 | AT4G14300 | 36.559 | 186 | 101 | 2 | 2 | 170 | 4 | 189 | 2.55e-33 | 128 |
| MS.gene011817.t1 | AT4G14300 | 29.108 | 213 | 120 | 3 | 93 | 304 | 7 | 189 | 3.93e-19 | 88.6 |
| MS.gene011817.t1 | AT4G14300 | 36.559 | 186 | 101 | 2 | 2 | 170 | 4 | 189 | 2.55e-33 | 128 |
| MS.gene011817.t1 | AT4G14300 | 29.108 | 213 | 120 | 3 | 93 | 304 | 7 | 189 | 3.93e-19 | 88.6 |
| MS.gene011817.t1 | AT2G33410 | 36.559 | 186 | 101 | 2 | 2 | 170 | 4 | 189 | 2.48e-32 | 125 |
| MS.gene011817.t1 | AT2G33410 | 26.512 | 215 | 123 | 6 | 93 | 304 | 7 | 189 | 2.93e-18 | 85.9 |
| MS.gene011817.t1 | AT5G47620 | 34.973 | 183 | 106 | 2 | 1 | 170 | 3 | 185 | 6.79e-30 | 119 |
| MS.gene011817.t1 | AT5G47620 | 27.313 | 227 | 127 | 4 | 93 | 318 | 7 | 196 | 1.75e-20 | 92.8 |
| MS.gene011817.t1 | AT5G47620 | 34.973 | 183 | 106 | 2 | 1 | 170 | 3 | 185 | 6.79e-30 | 119 |
| MS.gene011817.t1 | AT5G47620 | 27.313 | 227 | 127 | 4 | 93 | 318 | 7 | 196 | 1.75e-20 | 92.8 |
| MS.gene011817.t1 | AT5G47620 | 34.973 | 183 | 106 | 2 | 1 | 170 | 3 | 185 | 6.79e-30 | 119 |
| MS.gene011817.t1 | AT5G47620 | 27.313 | 227 | 127 | 4 | 93 | 318 | 7 | 196 | 1.75e-20 | 92.8 |
| MS.gene011817.t1 | AT1G17640 | 37.059 | 170 | 102 | 2 | 5 | 169 | 67 | 236 | 8.44e-30 | 118 |
| MS.gene011817.t1 | AT1G17640 | 40.476 | 84 | 48 | 1 | 4 | 85 | 157 | 240 | 4.17e-11 | 64.3 |
| MS.gene011817.t1 | AT1G17640 | 37.059 | 170 | 102 | 2 | 5 | 169 | 67 | 236 | 8.44e-30 | 118 |
| MS.gene011817.t1 | AT1G17640 | 40.476 | 84 | 48 | 1 | 4 | 85 | 157 | 240 | 4.17e-11 | 64.3 |
| MS.gene011817.t1 | AT1G17640 | 37.059 | 170 | 102 | 2 | 5 | 169 | 67 | 236 | 8.44e-30 | 118 |
| MS.gene011817.t1 | AT1G17640 | 40.476 | 84 | 48 | 1 | 4 | 85 | 157 | 240 | 4.17e-11 | 64.3 |
| MS.gene011817.t1 | AT5G55550 | 26.460 | 291 | 144 | 7 | 5 | 227 | 7 | 295 | 2.04e-27 | 113 |
| MS.gene011817.t1 | AT5G55550 | 28.826 | 281 | 165 | 10 | 93 | 346 | 7 | 279 | 1.33e-17 | 84.3 |
| MS.gene011817.t1 | AT5G55550 | 26.460 | 291 | 144 | 7 | 5 | 227 | 7 | 295 | 2.31e-27 | 113 |
| MS.gene011817.t1 | AT5G55550 | 28.826 | 281 | 165 | 10 | 93 | 346 | 7 | 279 | 9.32e-18 | 85.1 |
| MS.gene011817.t1 | AT5G47620 | 31.707 | 205 | 105 | 3 | 1 | 170 | 3 | 207 | 8.65e-26 | 108 |
| MS.gene011817.t1 | AT5G47620 | 27.706 | 231 | 145 | 7 | 92 | 318 | 6 | 218 | 2.63e-18 | 86.3 |
| MS.gene011817.t1 | AT1G58470 | 29.956 | 227 | 130 | 3 | 5 | 202 | 7 | 233 | 5.03e-25 | 104 |
| MS.gene011817.t1 | AT1G58470 | 27.660 | 235 | 142 | 6 | 93 | 321 | 7 | 219 | 1.95e-17 | 83.2 |
| MS.gene011817.t1 | AT1G58470 | 29.956 | 227 | 130 | 3 | 5 | 202 | 7 | 233 | 5.03e-25 | 104 |
| MS.gene011817.t1 | AT1G58470 | 27.660 | 235 | 142 | 6 | 93 | 321 | 7 | 219 | 1.95e-17 | 83.2 |
| MS.gene011817.t1 | AT5G40490 | 29.762 | 168 | 116 | 1 | 5 | 170 | 43 | 210 | 8.70e-23 | 99.4 |
| MS.gene011817.t1 | AT5G40490 | 27.149 | 221 | 105 | 3 | 88 | 302 | 38 | 208 | 5.37e-17 | 82.4 |
| MS.gene011817.t1 | AT5G40490 | 43.210 | 81 | 44 | 1 | 4 | 82 | 130 | 210 | 3.25e-12 | 67.8 |
| MS.gene011817.t1 | AT3G13224 | 28.655 | 171 | 118 | 2 | 4 | 170 | 10 | 180 | 6.05e-22 | 95.9 |
| MS.gene011817.t1 | AT5G40490 | 31.126 | 151 | 102 | 1 | 22 | 170 | 43 | 193 | 1.23e-21 | 95.9 |
| MS.gene011817.t1 | AT5G40490 | 43.210 | 81 | 44 | 1 | 4 | 82 | 113 | 193 | 4.16e-12 | 67.4 |
| MS.gene011817.t1 | AT3G13224 | 28.235 | 170 | 118 | 2 | 5 | 170 | 20 | 189 | 3.88e-21 | 93.6 |
| MS.gene011817.t1 | AT3G13224 | 28.571 | 161 | 113 | 1 | 5 | 163 | 20 | 180 | 6.16e-20 | 88.2 |
| MS.gene011817.t1 | AT3G13224 | 28.643 | 199 | 96 | 3 | 93 | 290 | 20 | 173 | 3.83e-19 | 85.9 |
| MS.gene011817.t1 | AT3G13224 | 41.176 | 85 | 47 | 1 | 227 | 311 | 20 | 101 | 3.85e-11 | 62.8 |
| MS.gene011817.t1 | AT3G15010 | 27.564 | 156 | 109 | 2 | 1 | 152 | 72 | 227 | 2.05e-15 | 77.4 |
| MS.gene011817.t1 | AT3G15010 | 27.564 | 156 | 109 | 2 | 1 | 152 | 72 | 227 | 2.05e-15 | 77.4 |
| MS.gene011817.t1 | AT5G54900 | 25.714 | 280 | 158 | 10 | 15 | 283 | 71 | 311 | 1.38e-13 | 72.0 |
| MS.gene011817.t1 | AT2G41060 | 23.313 | 163 | 114 | 3 | 4 | 155 | 128 | 290 | 3.44e-13 | 70.9 |
| MS.gene011817.t1 | AT2G41060 | 23.313 | 163 | 114 | 3 | 4 | 155 | 128 | 290 | 3.44e-13 | 70.9 |
| MS.gene011817.t1 | AT2G41060 | 23.313 | 163 | 114 | 3 | 4 | 155 | 128 | 290 | 3.44e-13 | 70.9 |
| MS.gene011817.t1 | AT4G34110 | 23.656 | 279 | 168 | 9 | 5 | 275 | 125 | 366 | 1.09e-12 | 69.7 |
| MS.gene011817.t1 | AT4G34110 | 25.424 | 236 | 138 | 10 | 18 | 235 | 229 | 444 | 8.95e-11 | 63.9 |
| MS.gene011817.t1 | AT5G19350 | 25.081 | 307 | 190 | 12 | 2 | 295 | 22 | 301 | 1.23e-12 | 69.3 |
| MS.gene011817.t1 | AT1G60000 | 27.746 | 173 | 117 | 4 | 5 | 170 | 86 | 257 | 4.03e-12 | 66.2 |
| MS.gene011817.t1 | AT4G24770 | 29.139 | 151 | 101 | 3 | 2 | 146 | 148 | 298 | 5.52e-12 | 66.6 |
| MS.gene011817.t1 | AT4G24770 | 29.139 | 151 | 101 | 3 | 2 | 146 | 148 | 298 | 5.52e-12 | 66.6 |
| MS.gene011817.t1 | AT3G23830 | 39.241 | 79 | 46 | 1 | 5 | 81 | 36 | 114 | 5.78e-12 | 63.2 |
| MS.gene011817.t1 | AT3G23830 | 39.241 | 79 | 46 | 1 | 5 | 81 | 36 | 114 | 5.78e-12 | 63.2 |
| MS.gene011817.t1 | AT3G56860 | 21.264 | 174 | 110 | 3 | 4 | 155 | 140 | 308 | 1.64e-11 | 65.9 |
| MS.gene011817.t1 | AT3G56860 | 21.264 | 174 | 110 | 3 | 4 | 155 | 140 | 308 | 1.64e-11 | 65.9 |
| MS.gene011817.t1 | AT3G56860 | 21.264 | 174 | 110 | 3 | 4 | 155 | 140 | 308 | 1.64e-11 | 65.9 |
| MS.gene011817.t1 | AT3G56860 | 21.264 | 174 | 110 | 3 | 4 | 155 | 140 | 308 | 1.64e-11 | 65.9 |
| MS.gene011817.t1 | AT3G56860 | 21.264 | 174 | 110 | 3 | 4 | 155 | 140 | 308 | 1.64e-11 | 65.9 |
| MS.gene011817.t1 | AT3G56860 | 21.264 | 174 | 110 | 3 | 4 | 155 | 140 | 308 | 1.64e-11 | 65.9 |
| MS.gene011817.t1 | AT3G56860 | 21.264 | 174 | 110 | 3 | 4 | 155 | 140 | 308 | 1.64e-11 | 65.9 |
| MS.gene011817.t1 | AT3G56860 | 21.264 | 174 | 110 | 3 | 4 | 155 | 140 | 308 | 1.64e-11 | 65.9 |
| MS.gene011817.t1 | AT3G56860 | 21.264 | 174 | 110 | 3 | 4 | 155 | 140 | 308 | 1.64e-11 | 65.9 |
| MS.gene011817.t1 | AT3G56860 | 21.264 | 174 | 110 | 3 | 4 | 155 | 140 | 308 | 1.64e-11 | 65.9 |
| MS.gene011817.t1 | AT3G56860 | 21.264 | 174 | 110 | 3 | 4 | 155 | 140 | 308 | 1.64e-11 | 65.9 |
| MS.gene011817.t1 | AT5G47620 | 37.864 | 103 | 60 | 2 | 217 | 318 | 37 | 136 | 2.27e-11 | 65.1 |
| MS.gene011817.t1 | AT5G50250 | 28.477 | 151 | 102 | 2 | 2 | 146 | 111 | 261 | 2.29e-11 | 64.3 |
| MS.gene011817.t1 | AT2G37220 | 26.923 | 182 | 105 | 5 | 5 | 161 | 92 | 270 | 3.89e-11 | 63.5 |
| MS.gene011817.t1 | AT3G52150 | 25.281 | 178 | 118 | 4 | 4 | 166 | 76 | 253 | 4.00e-11 | 63.2 |
| MS.gene011817.t1 | AT3G52150 | 25.281 | 178 | 118 | 4 | 4 | 166 | 76 | 253 | 4.00e-11 | 63.2 |
| MS.gene011817.t1 | AT1G74230 | 41.250 | 80 | 46 | 1 | 1 | 79 | 31 | 110 | 5.74e-11 | 63.2 |
Find 89 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCGTCCAAGTTCTATTTA+TGG | 0.167135 | 8.1:+27103340 | MS.gene011817:CDS |
| TGAATAGCATGGATTCTTTC+AGG | 0.201125 | 8.1:+27104242 | MS.gene011817:CDS |
| GAAGATCTTCGCCTGTATTT+TGG | 0.207885 | 8.1:+27103515 | MS.gene011817:CDS |
| ACTGGCCGATCTCGCGGTTT+TGG | 0.221192 | 8.1:+27100091 | MS.gene011817:CDS |
| AAAGAATATATGAGCAAATT+TGG | 0.238823 | 8.1:+27099518 | MS.gene011817:CDS |
| AGACCTGGTCATAGAGGTTT+TGG | 0.289763 | 8.1:+27103658 | MS.gene011817:CDS |
| ATATCCTAATTGTGGTGTTC+TGG | 0.305397 | 8.1:-27103251 | None:intergenic |
| GAAAGTCCTGTGAGGCCTTA+TGG | 0.318356 | 8.1:+27104298 | MS.gene011817:CDS |
| ATGGATTCTTTCAGGGGATA+TGG | 0.329394 | 8.1:+27104250 | MS.gene011817:CDS |
| ACAGGACTTTCATCAAAATA+AGG | 0.344025 | 8.1:-27104286 | None:intergenic |
| AAAGTCCTGTGAGGCCTTAT+GGG | 0.365563 | 8.1:+27104299 | MS.gene011817:CDS |
| AAGAGGTGCGGCTGAATCTA+TGG | 0.366406 | 8.1:-27104188 | None:intergenic |
| AGAACCAGAACACCACAATT+AGG | 0.378388 | 8.1:+27103247 | MS.gene011817:CDS |
| GGTGTTCTGGTTCTGCCAAT+TGG | 0.387485 | 8.1:-27103238 | None:intergenic |
| GATGAGGGCACCAGTCAAAA+AGG | 0.389836 | 8.1:+27100433 | MS.gene011817:CDS |
| ACAAGATTGTATTGTTATGA+AGG | 0.402688 | 8.1:+27099547 | MS.gene011817:CDS |
| GATGAAAGAAACCCATGAAC+TGG | 0.405707 | 8.1:+27101678 | MS.gene011817:CDS |
| TCTTAGATGTTTATATTCCT+AGG | 0.408577 | 8.1:+27103552 | MS.gene011817:CDS |
| AGATCTTCAGTGGTTGCCTC+CGG | 0.409448 | 8.1:-27103500 | None:intergenic |
| CGAAGACCTCATGAGATTTG+TGG | 0.411182 | 8.1:+27103724 | MS.gene011817:CDS |
| AATCCTGGCCACAAAGATTC+TGG | 0.420843 | 8.1:-27100459 | None:intergenic |
| GAATATAAACATCTAAGATA+TGG | 0.428824 | 8.1:-27103547 | None:intergenic |
| GAAGATGATTTCAAGCCAAT+TGG | 0.431236 | 8.1:+27103223 | MS.gene011817:CDS |
| GGCCAAATCTTCCAAAATAC+AGG | 0.460551 | 8.1:-27103526 | None:intergenic |
| TGTTACTGAAGGAGCAATCC+TGG | 0.462357 | 8.1:-27100474 | None:intergenic |
| GAATAGCATGGATTCTTTCA+GGG | 0.472134 | 8.1:+27104243 | MS.gene011817:CDS |
| TTTATCACTTTCGCAACTGC+AGG | 0.473517 | 8.1:+27100949 | MS.gene011817:CDS |
| TGGGAGAATGTACGATAGCC+TGG | 0.474405 | 8.1:+27104318 | MS.gene011817:CDS |
| AAAGGTTACCAGAATCTTTG+TGG | 0.478531 | 8.1:+27100451 | MS.gene011817:CDS |
| GATCTTCAGTGGTTGCCTCC+GGG | 0.485189 | 8.1:-27103499 | None:intergenic |
| ACCTCATGAGATTTGTGGAC+AGG | 0.489547 | 8.1:+27103729 | MS.gene011817:CDS |
| CTATCGTACATTCTCCCATA+AGG | 0.499170 | 8.1:-27104313 | None:intergenic |
| AAAGTTTCTTCTGTTACTGA+AGG | 0.500175 | 8.1:-27100485 | None:intergenic |
| GTCGCCAAGACTGTGTTCAC+TGG | 0.503081 | 8.1:-27100252 | None:intergenic |
| CTTAGATGTTTATATTCCTA+GGG | 0.504791 | 8.1:+27103553 | MS.gene011817:CDS |
| TTACCAGAATCTTTGTGGCC+AGG | 0.507326 | 8.1:+27100456 | MS.gene011817:CDS |
| TCATCAAAATAAGGCCTCAC+TGG | 0.510366 | 8.1:-27104277 | None:intergenic |
| ATGAAAGAAACCCATGAACT+GGG | 0.513956 | 8.1:+27101679 | MS.gene011817:CDS |
| CTTGGACGATCATACATAGT+TGG | 0.515791 | 8.1:-27103328 | None:intergenic |
| CACTCACAACATCGAAGTCC+AGG | 0.516187 | 8.1:-27104336 | None:intergenic |
| CCATGGGATGTTGATACTGA+TGG | 0.519314 | 8.1:+27099491 | MS.gene011817:CDS |
| GTGAACACAGTCTTGGCGAC+AGG | 0.529494 | 8.1:+27100255 | MS.gene011817:CDS |
| TGGATATGTGACATTCGTAT+CGG | 0.534136 | 8.1:+27100111 | MS.gene011817:CDS |
| CGGTCAACTGGCCGATCTCG+CGG | 0.534170 | 8.1:+27100085 | MS.gene011817:CDS |
| CATATCCAAAACCGCGAGAT+CGG | 0.538309 | 8.1:-27100096 | None:intergenic |
| GCCGCACCTCTTGATGAAGC+AGG | 0.539023 | 8.1:+27104199 | MS.gene011817:CDS |
| TTACTTCCATAAATAGAACT+TGG | 0.539729 | 8.1:-27103346 | None:intergenic |
| CGTATCGGTGGATGATGCTA+AGG | 0.542839 | 8.1:+27100126 | MS.gene011817:CDS |
| CCATCAGTATCAACATCCCA+TGG | 0.548183 | 8.1:-27099491 | None:intergenic |
| AATAGCATGGATTCTTTCAG+GGG | 0.553215 | 8.1:+27104244 | MS.gene011817:CDS |
| ATTCTCCCATAAGGCCTCAC+AGG | 0.558379 | 8.1:-27104304 | None:intergenic |
| CTATCCAGTGAACACAGTCT+TGG | 0.560974 | 8.1:+27100248 | MS.gene011817:CDS |
| CAGTCTTGGCGACAGGACGC+TGG | 0.564496 | 8.1:+27100262 | MS.gene011817:CDS |
| GTCAAGAGACCTGGTCATAG+AGG | 0.564977 | 8.1:+27103652 | MS.gene011817:CDS |
| CTGGGACCTGCTTCATCAAG+AGG | 0.565570 | 8.1:-27104205 | None:intergenic |
| GCTGCATATCTAGTTGATGC+AGG | 0.566523 | 8.1:-27103295 | None:intergenic |
| TAAATTGAAGGAGGAGATGA+GGG | 0.569318 | 8.1:+27100418 | MS.gene011817:intron |
| TCAACTAGATATGCAGCACT+TGG | 0.574058 | 8.1:+27103301 | MS.gene011817:CDS |
| GAATACTATGTTGAATAGCA+TGG | 0.577571 | 8.1:+27104231 | MS.gene011817:CDS |
| ATTCAACATAGTATTCCCAC+TGG | 0.580460 | 8.1:-27104224 | None:intergenic |
| ATCTTCAGTGGTTGCCTCCG+GGG | 0.582125 | 8.1:-27103498 | None:intergenic |
| ATTTATTTCCAACAGGATCG+TGG | 0.586353 | 8.1:+27100901 | MS.gene011817:intron |
| ATCTAGGATGTCAAGAGACC+TGG | 0.586442 | 8.1:+27103643 | MS.gene011817:intron |
| AGTCAAAGTGGCCACACCAA+AGG | 0.591082 | 8.1:+27100286 | MS.gene011817:CDS |
| TCTTCAGTGGTTGCCTCCGG+GGG | 0.593961 | 8.1:-27103497 | None:intergenic |
| ATTCGTTAAAACCTTTGGTG+TGG | 0.596309 | 8.1:-27100297 | None:intergenic |
| GGTTGATCGAGCAACACCTA+AGG | 0.598411 | 8.1:+27101717 | MS.gene011817:CDS |
| GTAAATTGAAGGAGGAGATG+AGG | 0.611912 | 8.1:+27100417 | MS.gene011817:intron |
| TATGCACTATATCCTAATTG+TGG | 0.612610 | 8.1:-27103259 | None:intergenic |
| GGGGATATGGCGGTCCAGTG+AGG | 0.613163 | 8.1:+27104263 | MS.gene011817:CDS |
| CAGGACGCTGGAAGTCAAAG+TGG | 0.614802 | 8.1:+27100274 | MS.gene011817:CDS |
| AATGGAGCAACGAAAGCTTG+TGG | 0.618865 | 8.1:+27099351 | None:intergenic |
| ACCTGCTTCATCAAGAGGTG+CGG | 0.620107 | 8.1:-27104200 | None:intergenic |
| TATTTGCGTTGCAGATTCTG+TGG | 0.620366 | 8.1:+27101648 | MS.gene011817:intron |
| TTGATGAAGCAGGTCCCAGT+GGG | 0.622736 | 8.1:+27104209 | MS.gene011817:CDS |
| GAAAGAAACCCATGAACTGG+GGG | 0.622961 | 8.1:+27101681 | MS.gene011817:CDS |
| AACAGATTTATATATGCCAA+AGG | 0.623364 | 8.1:+27100684 | MS.gene011817:CDS |
| CATGGGATGTTGATACTGAT+GGG | 0.625869 | 8.1:+27099492 | MS.gene011817:CDS |
| TCCTGTCCACAAATCTCATG+AGG | 0.643434 | 8.1:-27103730 | None:intergenic |
| GATTCTTTCAGGGGATATGG+CGG | 0.644637 | 8.1:+27104253 | MS.gene011817:CDS |
| ATATGTGACATTCGTATCGG+TGG | 0.654752 | 8.1:+27100114 | MS.gene011817:CDS |
| TCATGAGATTTGTGGACAGG+AGG | 0.656766 | 8.1:+27103732 | MS.gene011817:CDS |
| AAACCAAAACCTCTATGACC+AGG | 0.657073 | 8.1:-27103661 | None:intergenic |
| CATCAGTATCAACATCCCAT+GGG | 0.657850 | 8.1:-27099490 | None:intergenic |
| CTTGATGAAGCAGGTCCCAG+TGG | 0.667117 | 8.1:+27104208 | MS.gene011817:CDS |
| TGAAAGAAACCCATGAACTG+GGG | 0.667691 | 8.1:+27101680 | MS.gene011817:CDS |
| ATACAGGCGAAGATCTTCAG+TGG | 0.686546 | 8.1:-27103510 | None:intergenic |
| TTCAACATAGTATTCCCACT+GGG | 0.695306 | 8.1:-27104223 | None:intergenic |
| AAAGAAACCCATGAACTGGG+GGG | 0.745104 | 8.1:+27101682 | MS.gene011817:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTAAATTAAATTAAATTTG+AGG | - | chr8.1:27101049-27101068 | None:intergenic | 10.0% |
| !!! | GAATTTTAAAGTTAAAATTA+AGG | + | chr8.1:27102013-27102032 | MS.gene011817:intron | 10.0% |
| !!! | TGAACTTATATTTATTTTAT+GGG | + | chr8.1:27101304-27101323 | MS.gene011817:intron | 10.0% |
| !!! | TTGAACTTATATTTATTTTA+TGG | + | chr8.1:27101303-27101322 | MS.gene011817:intron | 10.0% |
| !!! | TTTATTTATGTTTGTATTTT+AGG | + | chr8.1:27100060-27100079 | MS.gene011817:intron | 10.0% |
| !! | TAGACAAATTTATATATTGA+AGG | - | chr8.1:27101463-27101482 | None:intergenic | 15.0% |
| !! | TATTTAATATATAAATTCGG+AGG | + | chr8.1:27099682-27099701 | MS.gene011817:intron | 15.0% |
| !! | TCTATTTATTAAAAGTTTCT+GGG | + | chr8.1:27101479-27101498 | MS.gene011817:intron | 15.0% |
| !! | TTAAAATTAAGGAAAGATTT+GGG | + | chr8.1:27102024-27102043 | MS.gene011817:intron | 15.0% |
| !! | TTAACAAAAGTAAAAAGAAA+AGG | - | chr8.1:27103180-27103199 | None:intergenic | 15.0% |
| !!! | AAAATTGTATATTAGGTTTT+GGG | + | chr8.1:27099464-27099483 | MS.gene011817:intron | 15.0% |
| !!! | AACTTATTGTTATTTTCTTT+GGG | + | chr8.1:27099927-27099946 | MS.gene011817:intron | 15.0% |
| !!! | ACATTAATTTTGAAATCAAA+TGG | + | chr8.1:27101580-27101599 | MS.gene011817:intron | 15.0% |
| !!! | TATAGTTTGTATTTTATAAC+TGG | + | chr8.1:27102216-27102235 | MS.gene011817:intron | 15.0% |
| !! | AAAGAATATATGAGCAAATT+TGG | + | chr8.1:27099518-27099537 | MS.gene011817:CDS | 20.0% |
| !! | AATTTGTAGTATTTCTTCTT+TGG | + | chr8.1:27100544-27100563 | MS.gene011817:intron | 20.0% |
| !! | ATTTGTAGTATTTCTTCTTT+GGG | + | chr8.1:27100545-27100564 | MS.gene011817:intron | 20.0% |
| !! | GTCTATTTATTAAAAGTTTC+TGG | + | chr8.1:27101478-27101497 | MS.gene011817:intron | 20.0% |
| !! | GTTAAAATTAAGGAAAGATT+TGG | + | chr8.1:27102023-27102042 | MS.gene011817:intron | 20.0% |
| !! | GTTAACTCATAACTTATTAA+AGG | - | chr8.1:27102421-27102440 | None:intergenic | 20.0% |
| !! | GTTCATGAAAATTGTATATT+AGG | + | chr8.1:27099457-27099476 | MS.gene011817:intron | 20.0% |
| !! | TAAAATTAAGGAAAGATTTG+GGG | + | chr8.1:27102025-27102044 | MS.gene011817:intron | 20.0% |
| !! | TAATCTATTGGATTGAATAA+TGG | + | chr8.1:27102445-27102464 | MS.gene011817:intron | 20.0% |
| !! | TTATGCATGAAAATAAAAAC+TGG | - | chr8.1:27103112-27103131 | None:intergenic | 20.0% |
| !! | TTTATATATTGAGTGTGATA+AGG | - | chr8.1:27099793-27099812 | None:intergenic | 20.0% |
| !!! | AAACATCTAAAGTTAAAATG+TGG | + | chr8.1:27100729-27100748 | MS.gene011817:intron | 20.0% |
| !!! | AATTGTAATTATGAGGTATT+TGG | + | chr8.1:27101346-27101365 | MS.gene011817:intron | 20.0% |
| !!! | ACTTATTGTTATTTTCTTTG+GGG | + | chr8.1:27099928-27099947 | MS.gene011817:intron | 20.0% |
| !!! | ATAAGCAAAAAGATTTTTGT+TGG | + | chr8.1:27103467-27103486 | MS.gene011817:CDS | 20.0% |
| !!! | GAAAATTGTATATTAGGTTT+TGG | + | chr8.1:27099463-27099482 | MS.gene011817:intron | 20.0% |
| !!! | GAACTTATTGTTATTTTCTT+TGG | + | chr8.1:27099926-27099945 | MS.gene011817:intron | 20.0% |
| !!! | GAATATAAACATCTAAGATA+TGG | - | chr8.1:27103550-27103569 | None:intergenic | 20.0% |
| !!! | TAGTTTAGATTGTCTAAAAT+AGG | + | chr8.1:27102548-27102567 | MS.gene011817:intron | 20.0% |
| !!! | TATCTGCATATTTTAACTTA+TGG | + | chr8.1:27101003-27101022 | MS.gene011817:intron | 20.0% |
| !!! | TTATGTTTGTATTTTAGGAA+CGG | + | chr8.1:27100065-27100084 | MS.gene011817:intron | 20.0% |
| ! | AAAATTAAGGAAAGATTTGG+GGG | + | chr8.1:27102026-27102045 | MS.gene011817:intron | 25.0% |
| ! | AAATAATGCTTCCATTTCAA+CGG | - | chr8.1:27100605-27100624 | None:intergenic | 25.0% |
| ! | AACAGATTTATATATGCCAA+AGG | + | chr8.1:27100684-27100703 | MS.gene011817:CDS | 25.0% |
| ! | AATGATGAAATAGAGTGAAT+TGG | + | chr8.1:27102496-27102515 | MS.gene011817:intron | 25.0% |
| ! | AATGTAGATTCAATTCAAGT+AGG | - | chr8.1:27103796-27103815 | None:intergenic | 25.0% |
| ! | ACAAGATTGTATTGTTATGA+AGG | + | chr8.1:27099547-27099566 | MS.gene011817:CDS | 25.0% |
| ! | ACTTCTTTAAACTGTCAATT+AGG | + | chr8.1:27103425-27103444 | MS.gene011817:intron | 25.0% |
| ! | AGACTAGTAGTAAATAATCA+CGG | - | chr8.1:27100334-27100353 | None:intergenic | 25.0% |
| ! | ATGTAGATTCAATTCAAGTA+GGG | - | chr8.1:27103795-27103814 | None:intergenic | 25.0% |
| ! | ATTTCATTCGTTAAAACCTT+TGG | - | chr8.1:27100305-27100324 | None:intergenic | 25.0% |
| ! | CTCGAAATTTAAAAGCAAAA+AGG | - | chr8.1:27100019-27100038 | None:intergenic | 25.0% |
| ! | CTTAGATGTTTATATTCCTA+GGG | + | chr8.1:27103553-27103572 | MS.gene011817:CDS | 25.0% |
| ! | CTTCTTTAAACTGTCAATTA+GGG | + | chr8.1:27103426-27103445 | MS.gene011817:intron | 25.0% |
| ! | GAGTTAACTGTTTAATCTAT+TGG | + | chr8.1:27102433-27102452 | MS.gene011817:intron | 25.0% |
| ! | TAAAATAGGATGAAATGGAA+TGG | + | chr8.1:27102562-27102581 | MS.gene011817:intron | 25.0% |
| ! | TATAGAAATACAGAGAGAAA+AGG | - | chr8.1:27101173-27101192 | None:intergenic | 25.0% |
| ! | TCATTATCTGTTTATTAGTC+TGG | + | chr8.1:27102358-27102377 | MS.gene011817:intron | 25.0% |
| ! | TCTTAGATGTTTATATTCCT+AGG | + | chr8.1:27103552-27103571 | MS.gene011817:CDS | 25.0% |
| ! | TTATATATTGAAGGTCAGAA+CGG | - | chr8.1:27101454-27101473 | None:intergenic | 25.0% |
| ! | TTCATGCATAAATCTTTGTT+TGG | + | chr8.1:27103121-27103140 | MS.gene011817:intron | 25.0% |
| ! | TTCTATACATCAATAACACA+GGG | + | chr8.1:27101186-27101205 | MS.gene011817:intron | 25.0% |
| ! | TTCTTTAAACTGTCAATTAG+GGG | + | chr8.1:27103427-27103446 | MS.gene011817:intron | 25.0% |
| ! | TTTACAAGTGAAGAAGTAAT+AGG | - | chr8.1:27102816-27102835 | None:intergenic | 25.0% |
| ! | TTTCTATACATCAATAACAC+AGG | + | chr8.1:27101185-27101204 | MS.gene011817:intron | 25.0% |
| ! | TTTGTAGTATTTCTTCTTTG+GGG | + | chr8.1:27100546-27100565 | MS.gene011817:intron | 25.0% |
| !! | ATCTAAAGTTAAAATGTGGT+TGG | + | chr8.1:27100733-27100752 | MS.gene011817:intron | 25.0% |
| !! | CTAATCTGTAATTTAGTCTT+TGG | + | chr8.1:27102784-27102803 | MS.gene011817:intron | 25.0% |
| !! | CTTTTCGAATTGTAATTATG+AGG | + | chr8.1:27101339-27101358 | MS.gene011817:intron | 25.0% |
| !! | TAATAAGCTGTATTCCATTT+TGG | + | chr8.1:27103197-27103216 | MS.gene011817:intron | 25.0% |
| !! | TCTAAAATTCTTCTGTAATC+AGG | - | chr8.1:27101513-27101532 | None:intergenic | 25.0% |
| !! | TTGTCTAAAATAGGATGAAA+TGG | + | chr8.1:27102557-27102576 | MS.gene011817:intron | 25.0% |
| !! | TTTATTAAAAGTTTCTGGGA+TGG | + | chr8.1:27101483-27101502 | MS.gene011817:intron | 25.0% |
| !!! | CTTATCCTTTTTTAAAAACC+CGG | - | chr8.1:27101994-27102013 | None:intergenic | 25.0% |
| !!! | CTTTTAAATTTCGAGTTTAC+TGG | + | chr8.1:27100024-27100043 | MS.gene011817:intron | 25.0% |
| !!! | GTTTATTAGTCTGGTTTTTT+AGG | + | chr8.1:27102367-27102386 | MS.gene011817:intron | 25.0% |
| !!! | TTTTGTCATTTATTTCCAAC+AGG | + | chr8.1:27100894-27100913 | MS.gene011817:intron | 25.0% |
| AAAGTTTCTTCTGTTACTGA+AGG | - | chr8.1:27100488-27100507 | None:intergenic | 30.0% | |
| AACAACAACTAAGCGTTATT+GGG | - | chr8.1:27099656-27099675 | None:intergenic | 30.0% | |
| AACAAGTTAAATAGAATGCC+GGG | - | chr8.1:27103056-27103075 | None:intergenic | 30.0% | |
| AATCCAAGATGTTCTCAATA+CGG | + | chr8.1:27103018-27103037 | MS.gene011817:intron | 30.0% | |
| ACAATTACACTTGGAATACA+TGG | - | chr8.1:27104108-27104127 | None:intergenic | 30.0% | |
| ACAGGACTTTCATCAAAATA+AGG | - | chr8.1:27104289-27104308 | None:intergenic | 30.0% | |
| ACATGCATATCTAGTAAATG+AGG | + | chr8.1:27100169-27100188 | MS.gene011817:intron | 30.0% | |
| ACCAATGACAAAACCATAAA+AGG | - | chr8.1:27102284-27102303 | None:intergenic | 30.0% | |
| ACCAGAAGAAAACAGTAATA+AGG | - | chr8.1:27101794-27101813 | None:intergenic | 30.0% | |
| ACTAGTATCGTGATAATCAT+TGG | + | chr8.1:27101097-27101116 | MS.gene011817:intron | 30.0% | |
| AGGCATGTATAACTATAATC+AGG | - | chr8.1:27103160-27103179 | None:intergenic | 30.0% | |
| ATGCATCGTTCATAAAAGTA+TGG | + | chr8.1:27101860-27101879 | MS.gene011817:intron | 30.0% | |
| ATGCTTTGCTTGTAAATTGA+AGG | + | chr8.1:27100406-27100425 | MS.gene011817:intron | 30.0% | |
| ATTTCTCAAAATGACTGCAA+AGG | - | chr8.1:27100654-27100673 | None:intergenic | 30.0% | |
| CAACAAGTTAAATAGAATGC+CGG | - | chr8.1:27103057-27103076 | None:intergenic | 30.0% | |
| CAATGACAAAACCATAAAAG+GGG | - | chr8.1:27102282-27102301 | None:intergenic | 30.0% | |
| CATATTCAATTGTTGAAAGC+TGG | + | chr8.1:27103599-27103618 | MS.gene011817:intron | 30.0% | |
| CCAATGACAAAACCATAAAA+GGG | - | chr8.1:27102283-27102302 | None:intergenic | 30.0% | |
| CTAGATCAAAATAGAGAGAT+GGG | - | chr8.1:27103629-27103648 | None:intergenic | 30.0% | |
| GAATACTATGTTGAATAGCA+TGG | + | chr8.1:27104231-27104250 | MS.gene011817:CDS | 30.0% | |
| GCTAAACAAATATTCCAGTT+TGG | - | chr8.1:27102732-27102751 | None:intergenic | 30.0% | |
| GTAATTGTATGTGTCAATCT+TGG | + | chr8.1:27104120-27104139 | MS.gene011817:intron | 30.0% | |
| TAACAACAACTAAGCGTTAT+TGG | - | chr8.1:27099657-27099676 | None:intergenic | 30.0% | |
| TATGCACTATATCCTAATTG+TGG | - | chr8.1:27103262-27103281 | None:intergenic | 30.0% | |
| TCTATTTATGGAAGTAAGCA+TGG | + | chr8.1:27103352-27103371 | MS.gene011817:intron | 30.0% | |
| TCTTTAAACTGTCAATTAGG+GGG | + | chr8.1:27103428-27103447 | MS.gene011817:intron | 30.0% | |
| TGCATGAAAATAAAAACTGG+TGG | - | chr8.1:27103109-27103128 | None:intergenic | 30.0% | |
| TGGAATGGAACATGATAAAA+TGG | + | chr8.1:27102577-27102596 | MS.gene011817:intron | 30.0% | |
| TGTGTATGCACATTTGTTTA+AGG | + | chr8.1:27104049-27104068 | MS.gene011817:intron | 30.0% | |
| TTGACACATACAATTACACT+TGG | - | chr8.1:27104117-27104136 | None:intergenic | 30.0% | |
| ! | AAATCTTTTTGCTTATCCCA+CGG | - | chr8.1:27103463-27103482 | None:intergenic | 30.0% |
| ! | AATCTATTGTTCTGAACTAG+AGG | - | chr8.1:27101916-27101935 | None:intergenic | 30.0% |
| ! | ATACTTTTATGAACGATGCA+TGG | - | chr8.1:27101861-27101880 | None:intergenic | 30.0% |
| ! | ATCTATTGTTCTGAACTAGA+GGG | - | chr8.1:27101915-27101934 | None:intergenic | 30.0% |
| ! | CAGTAACAGAAGAAACTTTT+AGG | + | chr8.1:27100489-27100508 | MS.gene011817:CDS | 30.0% |
| ! | CATAAATCTTTGTTTGGTGA+TGG | + | chr8.1:27103127-27103146 | MS.gene011817:intron | 30.0% |
| ! | CTGAATAACGAAAGTATGAA+AGG | + | chr8.1:27102702-27102721 | MS.gene011817:intron | 30.0% |
| ! | GAAATGGCATTGAAATAAGT+GGG | + | chr8.1:27103826-27103845 | MS.gene011817:intron | 30.0% |
| ! | TAACAGAAGAAACTTTTAGG+AGG | + | chr8.1:27100492-27100511 | MS.gene011817:CDS | 30.0% |
| ! | TATTTTATGGGACATGTTGT+TGG | + | chr8.1:27101316-27101335 | MS.gene011817:intron | 30.0% |
| ! | TCCTTATTACTGTTTTCTTC+TGG | + | chr8.1:27101790-27101809 | MS.gene011817:intron | 30.0% |
| ! | TTTTCAAATATGATCTCCCA+AGG | - | chr8.1:27102068-27102087 | None:intergenic | 30.0% |
| !! | ATTCGGAGGTGTTAAATAAT+TGG | + | chr8.1:27099696-27099715 | MS.gene011817:intron | 30.0% |
| !! | TGCAGTCATTTTGAGAAATA+CGG | + | chr8.1:27100655-27100674 | MS.gene011817:intron | 30.0% |
| !! | TTCGGAGGTGTTAAATAATT+GGG | + | chr8.1:27099697-27099716 | MS.gene011817:intron | 30.0% |
| !!! | CTTTTAAGTTATACGAGGTA+TGG | + | chr8.1:27100370-27100389 | MS.gene011817:intron | 30.0% |
| !!! | TATTGTTATTTTCTTTGGGG+TGG | + | chr8.1:27099931-27099950 | MS.gene011817:intron | 30.0% |
| !!! | TTTTGGTTTTGTGACTTTTG+CGG | + | chr8.1:27103675-27103694 | MS.gene011817:CDS | 30.0% |
| AAAGGTTACCAGAATCTTTG+TGG | + | chr8.1:27100451-27100470 | MS.gene011817:CDS | 35.0% | |
| AAATCATCTTCCTGCCAAAA+TGG | - | chr8.1:27103214-27103233 | None:intergenic | 35.0% | |
| AACGCAAATATCATCCTTAC+AGG | - | chr8.1:27101638-27101657 | None:intergenic | 35.0% | |
| AAGCATGTCTAGTATGATAC+AGG | - | chr8.1:27102945-27102964 | None:intergenic | 35.0% | |
| AATAGCATGGATTCTTTCAG+GGG | + | chr8.1:27104244-27104263 | MS.gene011817:CDS | 35.0% | |
| AATCATCTTTGTAGACCATC+TGG | - | chr8.1:27104021-27104040 | None:intergenic | 35.0% | |
| AATGTATGCCCAGAGTAAAA+AGG | - | chr8.1:27102251-27102270 | None:intergenic | 35.0% | |
| ACAACAACTAAGCGTTATTG+GGG | - | chr8.1:27099655-27099674 | None:intergenic | 35.0% | |
| ACATGCTTATCCATGTTTCA+TGG | + | chr8.1:27099847-27099866 | MS.gene011817:intron | 35.0% | |
| ATATCCTAATTGTGGTGTTC+TGG | - | chr8.1:27103254-27103273 | None:intergenic | 35.0% | |
| ATCACGATCTTTACATAGTC+TGG | + | chr8.1:27099812-27099831 | MS.gene011817:intron | 35.0% | |
| ATGAAAGAAACCCATGAACT+GGG | + | chr8.1:27101679-27101698 | MS.gene011817:CDS | 35.0% | |
| ATGTATGCCCAGAGTAAAAA+GGG | - | chr8.1:27102250-27102269 | None:intergenic | 35.0% | |
| ATGTCTAGTATGATACAGGA+GGG | - | chr8.1:27102941-27102960 | None:intergenic | 35.0% | |
| ATTCAACATAGTATTCCCAC+TGG | - | chr8.1:27104227-27104246 | None:intergenic | 35.0% | |
| ATTCGTTAAAACCTTTGGTG+TGG | - | chr8.1:27100300-27100319 | None:intergenic | 35.0% | |
| ATTTATTTCCAACAGGATCG+TGG | + | chr8.1:27100901-27100920 | MS.gene011817:intron | 35.0% | |
| CAAAATTAATGTCATGACCC+AGG | - | chr8.1:27101572-27101591 | None:intergenic | 35.0% | |
| CAGTATTTATTTGCACACCA+TGG | - | chr8.1:27102157-27102176 | None:intergenic | 35.0% | |
| CCTAGATCAAAATAGAGAGA+TGG | - | chr8.1:27103630-27103649 | None:intergenic | 35.0% | |
| CTTTGCTTGTAAATTGAAGG+AGG | + | chr8.1:27100409-27100428 | MS.gene011817:intron | 35.0% | |
| GAAGATGATTTCAAGCCAAT+TGG | + | chr8.1:27103223-27103242 | MS.gene011817:CDS | 35.0% | |
| GAATAGCATGGATTCTTTCA+GGG | + | chr8.1:27104243-27104262 | MS.gene011817:CDS | 35.0% | |
| GCATATCTAGTAAATGAGGA+AGG | + | chr8.1:27100173-27100192 | MS.gene011817:intron | 35.0% | |
| GGTGTGCAAATAAATACTGA+GGG | + | chr8.1:27102158-27102177 | MS.gene011817:intron | 35.0% | |
| GTAAGTCAAGTTTCAGAACA+AGG | - | chr8.1:27104086-27104105 | None:intergenic | 35.0% | |
| GTATCCGTGACAAAACATTA+TGG | + | chr8.1:27099606-27099625 | MS.gene011817:intron | 35.0% | |
| GTTGATTATCTATGATGCAC+TGG | + | chr8.1:27102901-27102920 | MS.gene011817:intron | 35.0% | |
| TAAATTGAAGGAGGAGATGA+GGG | + | chr8.1:27100418-27100437 | MS.gene011817:intron | 35.0% | |
| TACATTTCCTCGTTTGGAAA+TGG | + | chr8.1:27103810-27103829 | MS.gene011817:intron | 35.0% | |
| TCAAAAACACATCGAGGAAT+TGG | + | chr8.1:27100925-27100944 | MS.gene011817:CDS | 35.0% | |
| TGAATAGCATGGATTCTTTC+AGG | + | chr8.1:27104242-27104261 | MS.gene011817:CDS | 35.0% | |
| TGAATCTACATTTCCTCGTT+TGG | + | chr8.1:27103804-27103823 | MS.gene011817:intron | 35.0% | |
| TGGATATGTGACATTCGTAT+CGG | + | chr8.1:27100111-27100130 | MS.gene011817:CDS | 35.0% | |
| TGGTGTGCAAATAAATACTG+AGG | + | chr8.1:27102157-27102176 | MS.gene011817:intron | 35.0% | |
| TTCAACATAGTATTCCCACT+GGG | - | chr8.1:27104226-27104245 | None:intergenic | 35.0% | |
| TTCCTAGGGTAAGATTAAGA+TGG | + | chr8.1:27103567-27103586 | MS.gene011817:intron | 35.0% | |
| TTGTTTAGCACCATGAAACA+TGG | - | chr8.1:27099860-27099879 | None:intergenic | 35.0% | |
| ! | AATCTTTTTGCTTATCCCAC+GGG | - | chr8.1:27103462-27103481 | None:intergenic | 35.0% |
| ! | ATTCTGGTAACCTTTTTGAC+TGG | - | chr8.1:27100446-27100465 | None:intergenic | 35.0% |
| ! | GGAAATGGCATTGAAATAAG+TGG | + | chr8.1:27103825-27103844 | MS.gene011817:intron | 35.0% |
| ! | TAAAAACTGGTGGTGTGAAA+CGG | - | chr8.1:27103099-27103118 | None:intergenic | 35.0% |
| ! | TACGCCATAATGTTTTGTCA+CGG | - | chr8.1:27099613-27099632 | None:intergenic | 35.0% |
| ! | TCAATATCTGTTAGCCTGTA+AGG | + | chr8.1:27101621-27101640 | MS.gene011817:intron | 35.0% |
| ! | TTTTACTCTGGGCATACATT+TGG | + | chr8.1:27102251-27102270 | MS.gene011817:intron | 35.0% |
| !! | AAGCTCTAAACAATCACCTT+AGG | - | chr8.1:27101736-27101755 | None:intergenic | 35.0% |
| !! | ATTTTGATGAAAGTCCTGTG+AGG | + | chr8.1:27104290-27104309 | MS.gene011817:CDS | 35.0% |
| !!! | CATATTTTGCTTTTTCGCCT+GGG | + | chr8.1:27101552-27101571 | MS.gene011817:intron | 35.0% |
| !!! | CCATCTCTCTATTTTGATCT+AGG | + | chr8.1:27103627-27103646 | MS.gene011817:intron | 35.0% |
| !!! | CCCTTTTATGGTTTTGTCAT+TGG | + | chr8.1:27102280-27102299 | MS.gene011817:intron | 35.0% |
| !!! | GTCTGCTTTTAAGTTATACG+AGG | + | chr8.1:27100365-27100384 | MS.gene011817:intron | 35.0% |
| !!! | TCATATTTTGCTTTTTCGCC+TGG | + | chr8.1:27101551-27101570 | MS.gene011817:intron | 35.0% |
| !!! | TGGGAGTATTTTCTTCTTCA+GGG | + | chr8.1:27099716-27099735 | MS.gene011817:intron | 35.0% |
| !!! | TTGGGAGTATTTTCTTCTTC+AGG | + | chr8.1:27099715-27099734 | MS.gene011817:intron | 35.0% |
| AAACCAAAACCTCTATGACC+AGG | - | chr8.1:27103664-27103683 | None:intergenic | 40.0% | |
| AATATGCTGTCGACACACAT+TGG | + | chr8.1:27102966-27102985 | MS.gene011817:intron | 40.0% | |
| AATCTCCGATTCCGTTGAAA+TGG | + | chr8.1:27100591-27100610 | MS.gene011817:intron | 40.0% | |
| ACGATGACTCATTGATAGAC+AGG | + | chr8.1:27101968-27101987 | MS.gene011817:intron | 40.0% | |
| AGAACCAGAACACCACAATT+AGG | + | chr8.1:27103247-27103266 | MS.gene011817:CDS | 40.0% | |
| AGGAGATTCTATACGAGAGT+AGG | - | chr8.1:27099752-27099771 | None:intergenic | 40.0% | |
| AGGATATGGATACTCTCCTT+GGG | + | chr8.1:27102049-27102068 | MS.gene011817:intron | 40.0% | |
| AGGTACTTTCCTCACTTTGA+TGG | + | chr8.1:27100704-27100723 | MS.gene011817:intron | 40.0% | |
| ATAGATCACTGCAAGCAGTA+AGG | - | chr8.1:27103882-27103901 | None:intergenic | 40.0% | |
| ATATGTGACATTCGTATCGG+TGG | + | chr8.1:27100114-27100133 | MS.gene011817:CDS | 40.0% | |
| ATGGATTCTTTCAGGGGATA+TGG | + | chr8.1:27104250-27104269 | MS.gene011817:CDS | 40.0% | |
| ATTAAGGAAAGATTTGGGGG+AGG | + | chr8.1:27102029-27102048 | MS.gene011817:intron | 40.0% | |
| CAAAAGAAATTTGCGCTGTC+AGG | - | chr8.1:27103977-27103996 | None:intergenic | 40.0% | |
| CATCAGTATCAACATCCCAT+GGG | - | chr8.1:27099493-27099512 | None:intergenic | 40.0% | |
| CATGGGATGTTGATACTGAT+GGG | + | chr8.1:27099492-27099511 | MS.gene011817:CDS | 40.0% | |
| CATGTCGAAAAATGTCCAGA+TGG | + | chr8.1:27104003-27104022 | MS.gene011817:intron | 40.0% | |
| CATGTCTAGTATGATACAGG+AGG | - | chr8.1:27102942-27102961 | None:intergenic | 40.0% | |
| CTATCGTACATTCTCCCATA+AGG | - | chr8.1:27104316-27104335 | None:intergenic | 40.0% | |
| CTTGGACGATCATACATAGT+TGG | - | chr8.1:27103331-27103350 | None:intergenic | 40.0% | |
| GATGAAAGAAACCCATGAAC+TGG | + | chr8.1:27101678-27101697 | MS.gene011817:CDS | 40.0% | |
| GATGTTTGACCATCAAAGTG+AGG | - | chr8.1:27100716-27100735 | None:intergenic | 40.0% | |
| GATTATCTATGATGCACTGG+TGG | + | chr8.1:27102904-27102923 | MS.gene011817:intron | 40.0% | |
| GGCCAAATCTTCCAAAATAC+AGG | - | chr8.1:27103529-27103548 | None:intergenic | 40.0% | |
| GTAAATTGAAGGAGGAGATG+AGG | + | chr8.1:27100417-27100436 | MS.gene011817:intron | 40.0% | |
| GTACCACAGACAAATAGTGA+CGG | - | chr8.1:27100980-27100999 | None:intergenic | 40.0% | |
| GTATGAAAGGCAAACCAAAC+TGG | + | chr8.1:27102715-27102734 | MS.gene011817:intron | 40.0% | |
| TATTTGCGTTGCAGATTCTG+TGG | + | chr8.1:27101648-27101667 | MS.gene011817:intron | 40.0% | |
| TCAACTAGATATGCAGCACT+TGG | + | chr8.1:27103301-27103320 | MS.gene011817:CDS | 40.0% | |
| TCATCAAAATAAGGCCTCAC+TGG | - | chr8.1:27104280-27104299 | None:intergenic | 40.0% | |
| TGAAAGAAACCCATGAACTG+GGG | + | chr8.1:27101680-27101699 | MS.gene011817:CDS | 40.0% | |
| TGATAAGGCTTCAGTTGCAA+CGG | - | chr8.1:27099778-27099797 | None:intergenic | 40.0% | |
| TGCCATCTTAATCTTACCCT+AGG | - | chr8.1:27103572-27103591 | None:intergenic | 40.0% | |
| TGCTTCCATTTCAACGGAAT+CGG | - | chr8.1:27100599-27100618 | None:intergenic | 40.0% | |
| TTCAAGTCCAGTGAAAACTG+TGG | - | chr8.1:27101231-27101250 | None:intergenic | 40.0% | |
| TTTATCACTTTCGCAACTGC+AGG | + | chr8.1:27100949-27100968 | MS.gene011817:CDS | 40.0% | |
| ! | AAAAACTGGTGGTGTGAAAC+GGG | - | chr8.1:27103098-27103117 | None:intergenic | 40.0% |
| ! | ACTACTAGTCTAGCTAATGC+TGG | + | chr8.1:27100343-27100362 | MS.gene011817:intron | 40.0% |
| ! | ATTTGGCGTATCCCCTTTTA+TGG | + | chr8.1:27102268-27102287 | MS.gene011817:intron | 40.0% |
| ! | GAAGATCTTCGCCTGTATTT+TGG | + | chr8.1:27103515-27103534 | MS.gene011817:CDS | 40.0% |
| ! | TCAGCTTCCCTTTTTACTCT+GGG | + | chr8.1:27102240-27102259 | MS.gene011817:intron | 40.0% |
| ! | TTCAATGCCATTTCCAAACG+AGG | - | chr8.1:27103820-27103839 | None:intergenic | 40.0% |
| ! | TTCAGCTTCCCTTTTTACTC+TGG | + | chr8.1:27102239-27102258 | MS.gene011817:intron | 40.0% |
| ! | TTTTTGATCCACGATCCTGT+TGG | - | chr8.1:27100912-27100931 | None:intergenic | 40.0% |
| !! | AAGCTGTATTCCATTTTGGC+AGG | + | chr8.1:27103201-27103220 | MS.gene011817:intron | 40.0% |
| !! | ACAGGCCGGGTTTTTAAAAA+AGG | + | chr8.1:27101986-27102005 | MS.gene011817:intron | 40.0% |
| !! | CAAAGTGAGGAAAGTACCTT+TGG | - | chr8.1:27100703-27100722 | None:intergenic | 40.0% |
| !! | CGCCTGTATTTTGGAAGATT+TGG | + | chr8.1:27103524-27103543 | MS.gene011817:CDS | 40.0% |
| !! | GTATTTTAGGAACGGTCAAC+TGG | + | chr8.1:27100073-27100092 | MS.gene011817:intron | 40.0% |
| !!! | ATTAGGTTTTGGGTATCCCA+TGG | + | chr8.1:27099474-27099493 | MS.gene011817:intron | 40.0% |
| !!! | GGGAGTATTTTCTTCTTCAG+GGG | + | chr8.1:27099717-27099736 | MS.gene011817:intron | 40.0% |
| !!! | TTAGGTTTTGGGTATCCCAT+GGG | + | chr8.1:27099475-27099494 | MS.gene011817:intron | 40.0% |
| AAAGAAACCCATGAACTGGG+GGG | + | chr8.1:27101682-27101701 | MS.gene011817:CDS | 45.0% | |
| AATCCTGGCCACAAAGATTC+TGG | - | chr8.1:27100462-27100481 | None:intergenic | 45.0% | |
| ACCTCATGAGATTTGTGGAC+AGG | + | chr8.1:27103729-27103748 | MS.gene011817:CDS | 45.0% | |
| ACGCCGTATTGAGAACATCT+TGG | - | chr8.1:27103024-27103043 | None:intergenic | 45.0% | |
| AGTCGAAGAACTAGTCACCA+TGG | + | chr8.1:27102137-27102156 | MS.gene011817:intron | 45.0% | |
| ATACAGGCGAAGATCTTCAG+TGG | - | chr8.1:27103513-27103532 | None:intergenic | 45.0% | |
| ATCACTGCAAGCAGTAAGGA+GGG | - | chr8.1:27103878-27103897 | None:intergenic | 45.0% | |
| CAACTAAGCGTTATTGGGGT+CGG | - | chr8.1:27099651-27099670 | None:intergenic | 45.0% | |
| CATATCCAAAACCGCGAGAT+CGG | - | chr8.1:27100099-27100118 | None:intergenic | 45.0% | |
| CCATCAGTATCAACATCCCA+TGG | - | chr8.1:27099494-27099513 | None:intergenic | 45.0% | |
| CCATGGGATGTTGATACTGA+TGG | + | chr8.1:27099491-27099510 | MS.gene011817:CDS | 45.0% | |
| CGAAGACCTCATGAGATTTG+TGG | + | chr8.1:27103724-27103743 | MS.gene011817:CDS | 45.0% | |
| CGTGGATCAAAAACACATCG+AGG | + | chr8.1:27100919-27100938 | MS.gene011817:CDS | 45.0% | |
| CTATCCAGTGAACACAGTCT+TGG | + | chr8.1:27100248-27100267 | MS.gene011817:CDS | 45.0% | |
| GAAAGAAACCCATGAACTGG+GGG | + | chr8.1:27101681-27101700 | MS.gene011817:CDS | 45.0% | |
| GAAAGATTTGGGGGAGGATA+TGG | + | chr8.1:27102035-27102054 | MS.gene011817:intron | 45.0% | |
| GAATTGGAGGGGGAAAAAGT+GGG | - | chr8.1:27102607-27102626 | None:intergenic | 45.0% | |
| GAGGATATGGATACTCTCCT+TGG | + | chr8.1:27102048-27102067 | MS.gene011817:intron | 45.0% | |
| GATTCTTTCAGGGGATATGG+CGG | + | chr8.1:27104253-27104272 | MS.gene011817:CDS | 45.0% | |
| TCATGAGATTTGTGGACAGG+AGG | + | chr8.1:27103732-27103751 | MS.gene011817:CDS | 45.0% | |
| TCATTTCACTCCGCTCGAAT+TGG | - | chr8.1:27102623-27102642 | None:intergenic | 45.0% | |
| TCCTGTCCACAAATCTCATG+AGG | - | chr8.1:27103733-27103752 | None:intergenic | 45.0% | |
| TGACTCATTGATAGACAGGC+CGG | + | chr8.1:27101972-27101991 | MS.gene011817:intron | 45.0% | |
| TGTTACTGAAGGAGCAATCC+TGG | - | chr8.1:27100477-27100496 | None:intergenic | 45.0% | |
| TTACCAGAATCTTTGTGGCC+AGG | + | chr8.1:27100456-27100475 | MS.gene011817:CDS | 45.0% | |
| ! | AAAGTCCTGTGAGGCCTTAT+GGG | + | chr8.1:27104299-27104318 | MS.gene011817:CDS | 45.0% |
| ! | AGACCTGGTCATAGAGGTTT+TGG | + | chr8.1:27103658-27103677 | MS.gene011817:CDS | 45.0% |
| ! | ATCTAGGATGTCAAGAGACC+TGG | + | chr8.1:27103643-27103662 | MS.gene011817:intron | 45.0% |
| ! | ATTCCAGCCACAGTTTTCAC+TGG | + | chr8.1:27101221-27101240 | MS.gene011817:intron | 45.0% |
| ! | GCTGCATATCTAGTTGATGC+AGG | - | chr8.1:27103298-27103317 | None:intergenic | 45.0% |
| ! | TTTGTGACTTTTGCGGACAG+TGG | + | chr8.1:27103682-27103701 | MS.gene011817:CDS | 45.0% |
| !! | GGACAGGAGGTACTTTGATT+TGG | + | chr8.1:27103745-27103764 | MS.gene011817:intron | 45.0% |
| !! | TACGTCTGAGTTCTGAGACA+GGG | + | chr8.1:27101139-27101158 | MS.gene011817:intron | 45.0% |
| !! | AAGTATTTAATATATAAATT+CGG | + | chr8.1:27099679-27099698 | MS.gene011817:intron | 5.0% |
| ACCTGCTTCATCAAGAGGTG+CGG | - | chr8.1:27104203-27104222 | None:intergenic | 50.0% | |
| AGATCTTCAGTGGTTGCCTC+CGG | - | chr8.1:27103503-27103522 | None:intergenic | 50.0% | |
| AGTCAAAGTGGCCACACCAA+AGG | + | chr8.1:27100286-27100305 | MS.gene011817:CDS | 50.0% | |
| AGTCCAGTGAAAACTGTGGC+TGG | - | chr8.1:27101227-27101246 | None:intergenic | 50.0% | |
| ATCAGAACCCCCCAGTTCAT+GGG | - | chr8.1:27101692-27101711 | None:intergenic | 50.0% | |
| ATTCTCCCATAAGGCCTCAC+AGG | - | chr8.1:27104307-27104326 | None:intergenic | 50.0% | |
| CACTCACAACATCGAAGTCC+AGG | - | chr8.1:27104339-27104358 | None:intergenic | 50.0% | |
| CACTTTCGCAACTGCAGGTT+TGG | + | chr8.1:27100954-27100973 | MS.gene011817:intron | 50.0% | |
| CGAATTGGAGGGGGAAAAAG+TGG | - | chr8.1:27102608-27102627 | None:intergenic | 50.0% | |
| CTGAATCTATGGCAACCTGC+AGG | - | chr8.1:27104180-27104199 | None:intergenic | 50.0% | |
| GAAAGTCCTGTGAGGCCTTA+TGG | + | chr8.1:27104298-27104317 | MS.gene011817:CDS | 50.0% | |
| GACTCATTGATAGACAGGCC+GGG | + | chr8.1:27101973-27101992 | MS.gene011817:intron | 50.0% | |
| GATCACTGCAAGCAGTAAGG+AGG | - | chr8.1:27103879-27103898 | None:intergenic | 50.0% | |
| GGCTTCAGTTGCAACGGAAT+AGG | - | chr8.1:27099772-27099791 | None:intergenic | 50.0% | |
| GGTTGATCGAGCAACACCTA+AGG | + | chr8.1:27101717-27101736 | MS.gene011817:CDS | 50.0% | |
| GTCAAGAGACCTGGTCATAG+AGG | + | chr8.1:27103652-27103671 | MS.gene011817:CDS | 50.0% | |
| TCACTGCAAGCAGTAAGGAG+GGG | - | chr8.1:27103877-27103896 | None:intergenic | 50.0% | |
| TCTGTGAATCATGCTCCTGC+AGG | + | chr8.1:27104162-27104181 | MS.gene011817:intron | 50.0% | |
| TGCGCTGTCAGGAATCATGT+AGG | - | chr8.1:27103966-27103985 | None:intergenic | 50.0% | |
| TGGCCGTCACTATTTGTCTG+TGG | + | chr8.1:27100974-27100993 | MS.gene011817:intron | 50.0% | |
| TGGGAGAATGTACGATAGCC+TGG | + | chr8.1:27104318-27104337 | MS.gene011817:CDS | 50.0% | |
| TTCACTCCGCTCGAATTGGA+GGG | - | chr8.1:27102619-27102638 | None:intergenic | 50.0% | |
| TTGATGAAGCAGGTCCCAGT+GGG | + | chr8.1:27104209-27104228 | MS.gene011817:CDS | 50.0% | |
| TTTCACTCCGCTCGAATTGG+AGG | - | chr8.1:27102620-27102639 | None:intergenic | 50.0% | |
| ! | AAGAGGTGCGGCTGAATCTA+TGG | - | chr8.1:27104191-27104210 | None:intergenic | 50.0% |
| ! | CGTATCGGTGGATGATGCTA+AGG | + | chr8.1:27100126-27100145 | MS.gene011817:CDS | 50.0% |
| ! | TTTTCCCCCTCCAATTCGAG+CGG | + | chr8.1:27102610-27102629 | MS.gene011817:intron | 50.0% |
| ! | TTTTTGCTTATCCCACGGGC+AGG | - | chr8.1:27103458-27103477 | None:intergenic | 50.0% |
| !! | GATGAGGGCACCAGTCAAAA+AGG | + | chr8.1:27100433-27100452 | MS.gene011817:CDS | 50.0% |
| !! | GGTGTTCTGGTTCTGCCAAT+TGG | - | chr8.1:27103241-27103260 | None:intergenic | 50.0% |
| !! | GTACGTCTGAGTTCTGAGAC+AGG | + | chr8.1:27101138-27101157 | MS.gene011817:intron | 50.0% |
| ACTGCAAGCAGTAAGGAGGG+GGG | - | chr8.1:27103875-27103894 | None:intergenic | 55.0% | |
| ATCTTCAGTGGTTGCCTCCG+GGG | - | chr8.1:27103501-27103520 | None:intergenic | 55.0% | |
| CACTGCAAGCAGTAAGGAGG+GGG | - | chr8.1:27103876-27103895 | None:intergenic | 55.0% | |
| CAGGACGCTGGAAGTCAAAG+TGG | + | chr8.1:27100274-27100293 | MS.gene011817:CDS | 55.0% | |
| CATCAGAACCCCCCAGTTCA+TGG | - | chr8.1:27101693-27101712 | None:intergenic | 55.0% | |
| CTGGGACCTGCTTCATCAAG+AGG | - | chr8.1:27104208-27104227 | None:intergenic | 55.0% | |
| CTTGATGAAGCAGGTCCCAG+TGG | + | chr8.1:27104208-27104227 | MS.gene011817:CDS | 55.0% | |
| GATCTTCAGTGGTTGCCTCC+GGG | - | chr8.1:27103502-27103521 | None:intergenic | 55.0% | |
| GTCGCCAAGACTGTGTTCAC+TGG | - | chr8.1:27100255-27100274 | None:intergenic | 55.0% | |
| GTGAACACAGTCTTGGCGAC+AGG | + | chr8.1:27100255-27100274 | MS.gene011817:CDS | 55.0% | |
| TCACTCCGCTCGAATTGGAG+GGG | - | chr8.1:27102618-27102637 | None:intergenic | 55.0% | |
| ! | TGAACTGGGGGGTTCTGATG+TGG | + | chr8.1:27101693-27101712 | MS.gene011817:CDS | 55.0% |
| ! | TTTTGTTGGCCGTCTTCCCC+CGG | + | chr8.1:27103481-27103500 | MS.gene011817:CDS | 55.0% |
| ATACGGCGTCAACACGCACC+CGG | + | chr8.1:27103035-27103054 | MS.gene011817:intron | 60.0% | |
| CAAGCAGTAAGGAGGGGGGA+GGG | - | chr8.1:27103871-27103890 | None:intergenic | 60.0% | |
| CACTCCGCTCGAATTGGAGG+GGG | - | chr8.1:27102617-27102636 | None:intergenic | 60.0% | |
| GCCGCACCTCTTGATGAAGC+AGG | + | chr8.1:27104199-27104218 | MS.gene011817:CDS | 60.0% | |
| TCTTCAGTGGTTGCCTCCGG+GGG | - | chr8.1:27103500-27103519 | None:intergenic | 60.0% | |
| ! | ACTGGCCGATCTCGCGGTTT+TGG | + | chr8.1:27100091-27100110 | MS.gene011817:CDS | 60.0% |
| ! | ACTGGGGGGTTCTGATGTGG+TGG | + | chr8.1:27101696-27101715 | MS.gene011817:CDS | 60.0% |
| CAGTCTTGGCGACAGGACGC+TGG | + | chr8.1:27100262-27100281 | MS.gene011817:CDS | 65.0% | |
| CGGTCAACTGGCCGATCTCG+CGG | + | chr8.1:27100085-27100104 | MS.gene011817:CDS | 65.0% | |
| GCAAGCAGTAAGGAGGGGGG+AGG | - | chr8.1:27103872-27103891 | None:intergenic | 65.0% | |
| GGGGATATGGCGGTCCAGTG+AGG | + | chr8.1:27104263-27104282 | MS.gene011817:CDS | 65.0% | |
| TAGGGGGAGAACCTGCCCGT+GGG | + | chr8.1:27103444-27103463 | MS.gene011817:intron | 65.0% | |
| TGGTTGCCTCCGGGGGAAGA+CGG | - | chr8.1:27103493-27103512 | None:intergenic | 65.0% | |
| TTAGGGGGAGAACCTGCCCG+TGG | + | chr8.1:27103443-27103462 | MS.gene011817:intron | 65.0% | |
| TGTTGGCCGTCTTCCCCCGG+AGG | + | chr8.1:27103484-27103503 | MS.gene011817:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 27099352 | 27104405 | 27099352 | ID=MS.gene011817 |
| chr8.1 | mRNA | 27099352 | 27104405 | 27099352 | ID=MS.gene011817.t1;Parent=MS.gene011817 |
| chr8.1 | exon | 27099352 | 27099372 | 27099352 | ID=MS.gene011817.t1.exon1;Parent=MS.gene011817.t1 |
| chr8.1 | CDS | 27099352 | 27099372 | 27099352 | ID=cds.MS.gene011817.t1;Parent=MS.gene011817.t1 |
| chr8.1 | exon | 27099479 | 27099568 | 27099479 | ID=MS.gene011817.t1.exon2;Parent=MS.gene011817.t1 |
| chr8.1 | CDS | 27099479 | 27099568 | 27099479 | ID=cds.MS.gene011817.t1;Parent=MS.gene011817.t1 |
| chr8.1 | exon | 27100082 | 27100147 | 27100082 | ID=MS.gene011817.t1.exon3;Parent=MS.gene011817.t1 |
| chr8.1 | CDS | 27100082 | 27100147 | 27100082 | ID=cds.MS.gene011817.t1;Parent=MS.gene011817.t1 |
| chr8.1 | exon | 27100242 | 27100307 | 27100242 | ID=MS.gene011817.t1.exon4;Parent=MS.gene011817.t1 |
| chr8.1 | CDS | 27100242 | 27100307 | 27100242 | ID=cds.MS.gene011817.t1;Parent=MS.gene011817.t1 |
| chr8.1 | exon | 27100428 | 27100513 | 27100428 | ID=MS.gene011817.t1.exon5;Parent=MS.gene011817.t1 |
| chr8.1 | CDS | 27100428 | 27100513 | 27100428 | ID=cds.MS.gene011817.t1;Parent=MS.gene011817.t1 |
| chr8.1 | exon | 27100660 | 27100705 | 27100660 | ID=MS.gene011817.t1.exon6;Parent=MS.gene011817.t1 |
| chr8.1 | CDS | 27100660 | 27100705 | 27100660 | ID=cds.MS.gene011817.t1;Parent=MS.gene011817.t1 |
| chr8.1 | exon | 27100916 | 27100970 | 27100916 | ID=MS.gene011817.t1.exon7;Parent=MS.gene011817.t1 |
| chr8.1 | CDS | 27100916 | 27100970 | 27100916 | ID=cds.MS.gene011817.t1;Parent=MS.gene011817.t1 |
| chr8.1 | exon | 27101662 | 27101738 | 27101662 | ID=MS.gene011817.t1.exon8;Parent=MS.gene011817.t1 |
| chr8.1 | CDS | 27101662 | 27101738 | 27101662 | ID=cds.MS.gene011817.t1;Parent=MS.gene011817.t1 |
| chr8.1 | exon | 27103223 | 27103364 | 27103223 | ID=MS.gene011817.t1.exon9;Parent=MS.gene011817.t1 |
| chr8.1 | CDS | 27103223 | 27103364 | 27103223 | ID=cds.MS.gene011817.t1;Parent=MS.gene011817.t1 |
| chr8.1 | exon | 27103447 | 27103574 | 27103447 | ID=MS.gene011817.t1.exon10;Parent=MS.gene011817.t1 |
| chr8.1 | CDS | 27103447 | 27103574 | 27103447 | ID=cds.MS.gene011817.t1;Parent=MS.gene011817.t1 |
| chr8.1 | exon | 27103649 | 27103753 | 27103649 | ID=MS.gene011817.t1.exon11;Parent=MS.gene011817.t1 |
| chr8.1 | CDS | 27103649 | 27103753 | 27103649 | ID=cds.MS.gene011817.t1;Parent=MS.gene011817.t1 |
| chr8.1 | exon | 27104184 | 27104405 | 27104184 | ID=MS.gene011817.t1.exon12;Parent=MS.gene011817.t1 |
| chr8.1 | CDS | 27104184 | 27104405 | 27104184 | ID=cds.MS.gene011817.t1;Parent=MS.gene011817.t1 |
| Gene Sequence |
| Protein sequence |
