Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31858.t1 | XP_013466436.1 | 98.7 | 379 | 5 | 0 | 1 | 379 | 1 | 379 | 6.90E-200 | 706.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31858.t1 | Q8GYX8 | 58.6 | 321 | 126 | 3 | 1 | 315 | 1 | 320 | 6.3e-101 | 369.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31858.t1 | A0A072VFB6 | 98.7 | 379 | 5 | 0 | 1 | 379 | 1 | 379 | 5.0e-200 | 706.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene046974 | MS.gene31858 | PPI |
| MS.gene31858 | MS.gene90510 | PPI |
| MS.gene31858 | MS.gene92387 | PPI |
| MS.gene31858 | MS.gene047628 | PPI |
| MS.gene015154 | MS.gene31858 | PPI |
| MS.gene92388 | MS.gene31858 | PPI |
| MS.gene31858 | MS.gene40413 | PPI |
| MS.gene31858 | MS.gene041083 | PPI |
| MS.gene31858 | MS.gene011817 | PPI |
| MS.gene31858 | MS.gene56778 | PPI |
| MS.gene31858 | MS.gene024992 | PPI |
| MS.gene31858 | MS.gene010354 | PPI |
| MS.gene071680 | MS.gene31858 | PPI |
| MS.gene31858 | MS.gene99200 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31858.t1 | MTR_1g029470 | 98.681 | 379 | 5 | 0 | 1 | 379 | 1 | 379 | 0.0 | 775 |
| MS.gene31858.t1 | MTR_1g029460 | 80.526 | 380 | 69 | 3 | 1 | 379 | 1 | 376 | 0.0 | 610 |
| MS.gene31858.t1 | MTR_8g037810 | 56.369 | 314 | 129 | 2 | 1 | 307 | 1 | 313 | 3.97e-117 | 343 |
| MS.gene31858.t1 | MTR_5g004570 | 63.596 | 228 | 78 | 1 | 1 | 223 | 1 | 228 | 3.38e-105 | 310 |
| MS.gene31858.t1 | MTR_5g004600 | 47.368 | 95 | 48 | 2 | 221 | 313 | 3 | 97 | 9.01e-22 | 91.7 |
| MS.gene31858.t1 | MTR_3g027580 | 50.000 | 74 | 36 | 1 | 6 | 78 | 89 | 162 | 7.17e-15 | 76.3 |
| MS.gene31858.t1 | MTR_2g083920 | 43.662 | 71 | 40 | 0 | 6 | 76 | 70 | 140 | 1.74e-14 | 73.6 |
| MS.gene31858.t1 | MTR_4g023470 | 55.385 | 65 | 29 | 0 | 7 | 71 | 87 | 151 | 1.96e-14 | 74.7 |
| MS.gene31858.t1 | MTR_4g080350 | 44.000 | 75 | 42 | 0 | 2 | 76 | 68 | 142 | 5.46e-14 | 72.8 |
| MS.gene31858.t1 | MTR_2g083920 | 43.662 | 71 | 40 | 0 | 6 | 76 | 70 | 140 | 1.29e-13 | 71.6 |
| MS.gene31858.t1 | MTR_8g006430 | 53.521 | 71 | 29 | 2 | 5 | 75 | 13 | 79 | 1.52e-13 | 72.0 |
| MS.gene31858.t1 | MTR_5g065860 | 42.683 | 82 | 47 | 0 | 1 | 82 | 43 | 124 | 1.49e-12 | 65.1 |
| MS.gene31858.t1 | MTR_2g014480 | 46.479 | 71 | 37 | 1 | 6 | 75 | 4 | 74 | 2.90e-12 | 67.4 |
| MS.gene31858.t1 | MTR_5g065160 | 47.143 | 70 | 37 | 0 | 4 | 73 | 81 | 150 | 2.97e-12 | 68.2 |
| MS.gene31858.t1 | MTR_5g065160 | 47.143 | 70 | 37 | 0 | 4 | 73 | 74 | 143 | 3.11e-12 | 68.2 |
| MS.gene31858.t1 | MTR_7g109340 | 47.887 | 71 | 37 | 0 | 7 | 77 | 27 | 97 | 3.57e-12 | 67.4 |
| MS.gene31858.t1 | MTR_5g065160 | 47.143 | 70 | 37 | 0 | 4 | 73 | 81 | 150 | 4.00e-12 | 67.8 |
| MS.gene31858.t1 | MTR_5g065160 | 47.143 | 70 | 37 | 0 | 4 | 73 | 80 | 149 | 4.17e-12 | 67.8 |
| MS.gene31858.t1 | MTR_5g035770 | 40.426 | 94 | 47 | 2 | 8 | 92 | 27 | 120 | 1.24e-11 | 66.2 |
| MS.gene31858.t1 | MTR_1g110310 | 39.726 | 73 | 44 | 0 | 8 | 80 | 18 | 90 | 1.71e-11 | 65.5 |
| MS.gene31858.t1 | MTR_4g023490 | 51.515 | 66 | 31 | 1 | 6 | 71 | 16 | 80 | 2.74e-11 | 64.7 |
| MS.gene31858.t1 | MTR_3g108020 | 44.444 | 72 | 39 | 1 | 5 | 75 | 3 | 74 | 4.63e-11 | 63.9 |
| MS.gene31858.t1 | MTR_2g104030 | 37.755 | 98 | 53 | 2 | 5 | 95 | 69 | 165 | 4.70e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene31858.t1 | AT1G77020 | 70.052 | 384 | 105 | 5 | 1 | 379 | 1 | 379 | 0.0 | 536 |
| MS.gene31858.t1 | AT1G76700 | 55.367 | 354 | 143 | 5 | 1 | 340 | 1 | 353 | 3.29e-132 | 384 |
| MS.gene31858.t1 | AT1G21080 | 52.632 | 361 | 156 | 5 | 1 | 348 | 1 | 359 | 8.86e-130 | 378 |
| MS.gene31858.t1 | AT1G21080 | 56.193 | 331 | 128 | 5 | 1 | 325 | 1 | 320 | 1.25e-129 | 378 |
| MS.gene31858.t1 | AT2G21510 | 51.594 | 345 | 156 | 3 | 1 | 334 | 1 | 345 | 8.57e-115 | 338 |
| MS.gene31858.t1 | AT2G21510 | 51.594 | 345 | 156 | 3 | 1 | 334 | 1 | 345 | 8.57e-115 | 338 |
| MS.gene31858.t1 | AT2G21510 | 51.136 | 352 | 154 | 4 | 1 | 334 | 1 | 352 | 4.60e-114 | 337 |
| MS.gene31858.t1 | AT2G21510 | 51.136 | 352 | 154 | 4 | 1 | 334 | 1 | 352 | 4.60e-114 | 337 |
| MS.gene31858.t1 | AT2G21510 | 54.603 | 315 | 135 | 2 | 1 | 307 | 1 | 315 | 3.99e-113 | 333 |
| MS.gene31858.t1 | AT4G39150 | 54.777 | 314 | 134 | 2 | 1 | 307 | 1 | 313 | 3.72e-112 | 331 |
| MS.gene31858.t1 | AT4G39150 | 54.777 | 314 | 134 | 2 | 1 | 307 | 1 | 313 | 3.72e-112 | 331 |
| MS.gene31858.t1 | AT4G39150 | 54.777 | 314 | 134 | 2 | 1 | 307 | 1 | 313 | 3.72e-112 | 331 |
| MS.gene31858.t1 | AT1G21080 | 47.985 | 273 | 128 | 4 | 89 | 348 | 1 | 272 | 8.94e-80 | 247 |
| MS.gene31858.t1 | AT5G48030 | 50.000 | 66 | 33 | 0 | 6 | 71 | 94 | 159 | 8.74e-14 | 72.8 |
| MS.gene31858.t1 | AT1G28210 | 47.619 | 63 | 33 | 0 | 7 | 69 | 49 | 111 | 2.69e-13 | 71.2 |
| MS.gene31858.t1 | AT1G28210 | 47.619 | 63 | 33 | 0 | 7 | 69 | 49 | 111 | 2.78e-13 | 71.2 |
| MS.gene31858.t1 | AT1G28210 | 47.619 | 63 | 33 | 0 | 7 | 69 | 49 | 111 | 3.25e-13 | 70.9 |
| MS.gene31858.t1 | AT2G42750 | 39.744 | 78 | 44 | 1 | 6 | 83 | 76 | 150 | 9.99e-13 | 68.9 |
| MS.gene31858.t1 | AT1G71000 | 47.887 | 71 | 32 | 2 | 2 | 68 | 5 | 74 | 2.74e-12 | 65.1 |
| MS.gene31858.t1 | AT1G59980 | 42.254 | 71 | 41 | 0 | 8 | 78 | 25 | 95 | 4.64e-12 | 67.0 |
| MS.gene31858.t1 | AT1G59980 | 42.254 | 71 | 41 | 0 | 8 | 78 | 25 | 95 | 5.24e-12 | 67.4 |
| MS.gene31858.t1 | AT1G71000 | 47.887 | 71 | 32 | 2 | 2 | 68 | 5 | 74 | 1.09e-11 | 63.2 |
| MS.gene31858.t1 | AT5G25530 | 38.318 | 107 | 50 | 3 | 6 | 96 | 4 | 110 | 1.18e-11 | 65.9 |
| MS.gene31858.t1 | AT1G80030 | 35.433 | 127 | 75 | 3 | 6 | 132 | 75 | 194 | 1.35e-11 | 66.2 |
| MS.gene31858.t1 | AT1G80030 | 35.433 | 127 | 75 | 3 | 6 | 132 | 75 | 194 | 1.35e-11 | 66.2 |
| MS.gene31858.t1 | AT1G80030 | 35.433 | 127 | 75 | 3 | 6 | 132 | 75 | 194 | 1.35e-11 | 66.2 |
| MS.gene31858.t1 | AT1G80030 | 35.433 | 127 | 75 | 3 | 6 | 132 | 75 | 194 | 1.59e-11 | 65.9 |
| MS.gene31858.t1 | AT5G06910 | 45.588 | 68 | 37 | 0 | 4 | 71 | 27 | 94 | 1.60e-11 | 64.7 |
| MS.gene31858.t1 | AT2G33735 | 42.188 | 64 | 37 | 0 | 6 | 69 | 22 | 85 | 2.18e-11 | 61.2 |
| MS.gene31858.t1 | AT2G33735 | 42.188 | 64 | 37 | 0 | 6 | 69 | 22 | 85 | 2.18e-11 | 61.2 |
| MS.gene31858.t1 | AT5G16650 | 39.024 | 82 | 50 | 0 | 6 | 87 | 11 | 92 | 3.46e-11 | 60.8 |
| MS.gene31858.t1 | AT5G16650 | 39.024 | 82 | 50 | 0 | 6 | 87 | 11 | 92 | 3.73e-11 | 61.6 |
| MS.gene31858.t1 | AT3G12170 | 44.118 | 68 | 38 | 0 | 4 | 71 | 9 | 76 | 4.61e-11 | 63.2 |
| MS.gene31858.t1 | AT1G59725 | 42.466 | 73 | 40 | 1 | 6 | 76 | 4 | 76 | 4.66e-11 | 63.9 |
| MS.gene31858.t1 | AT3G12170 | 44.118 | 68 | 38 | 0 | 4 | 71 | 45 | 112 | 4.83e-11 | 63.5 |
| MS.gene31858.t1 | AT3G62600 | 42.254 | 71 | 41 | 0 | 7 | 77 | 27 | 97 | 9.72e-11 | 63.2 |
Find 73 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATCTTGGAGTTCCATTTC+TGG | 0.127930 | 1.4:+14540332 | MS.gene31858:CDS |
| CTATCGTACCTGATTGAAAA+AGG | 0.234257 | 1.4:-14541970 | None:intergenic |
| TGTCTTTATTAAGACGAATA+TGG | 0.236894 | 1.4:-14540614 | None:intergenic |
| CAATGCTGCGCACAAATTTC+AGG | 0.265006 | 1.4:+14538301 | MS.gene31858:CDS |
| GCTGTCTTTGCCTTGCTCTT+TGG | 0.268463 | 1.4:+14539343 | MS.gene31858:CDS |
| GCAACCGCTCTTAAAATTCT+TGG | 0.288633 | 1.4:+14541035 | MS.gene31858:CDS |
| AATTCTTGGGAAGATATTTC+AGG | 0.290265 | 1.4:+14541049 | MS.gene31858:CDS |
| AGGAATGGATATGATCAAAA+TGG | 0.312283 | 1.4:+14538491 | MS.gene31858:CDS |
| AGCACAAGAACTAGGGAAAA+AGG | 0.324868 | 1.4:+14540305 | MS.gene31858:CDS |
| GCTGAATGGGTTCGCAATAA+AGG | 0.328906 | 1.4:+14540354 | MS.gene31858:CDS |
| TGATGAAAGTGAGGATTTGC+AGG | 0.338497 | 1.4:+14539432 | MS.gene31858:CDS |
| GAGTTCCATTTCTGGCTGAA+TGG | 0.340162 | 1.4:+14540340 | MS.gene31858:CDS |
| GAAATGGAACTCCAAGATAA+AGG | 0.345943 | 1.4:-14540329 | None:intergenic |
| CTGAAATTTGTGCGCAGCAT+TGG | 0.348941 | 1.4:-14538300 | None:intergenic |
| TCAAAATAGGAAGTCCAAAA+AGG | 0.348995 | 1.4:+14539668 | MS.gene31858:intron |
| TGCTGAGTTCTTCTTGAAGT+TGG | 0.353241 | 1.4:-14540548 | None:intergenic |
| GGATTTGCAGGAGAAGTTAA+AGG | 0.365646 | 1.4:+14539444 | MS.gene31858:CDS |
| TCGCAAAGCTTATTATCATA+AGG | 0.379047 | 1.4:+14538132 | MS.gene31858:CDS |
| CGCGTTGGTAGAAACCCTTT+TGG | 0.383529 | 1.4:-14539751 | None:intergenic |
| AGTTCCATTTCTGGCTGAAT+GGG | 0.388274 | 1.4:+14540341 | MS.gene31858:CDS |
| TGAAATTTGTGCGCAGCATT+GGG | 0.394095 | 1.4:-14538299 | None:intergenic |
| TCATATCCATTCCTTTGTAC+TGG | 0.405375 | 1.4:-14538482 | None:intergenic |
| TCTGTTATTGCAGGTGCTAA+AGG | 0.409650 | 1.4:+14540977 | MS.gene31858:intron |
| CCTTGCACACGTTTGTCAAA+TGG | 0.414394 | 1.4:+14540686 | MS.gene31858:CDS |
| CAACCGCTCTTAAAATTCTT+GGG | 0.419758 | 1.4:+14541036 | MS.gene31858:CDS |
| CGAACCCATTCAGCCAGAAA+TGG | 0.425167 | 1.4:-14540345 | None:intergenic |
| CTTTGGAAGTGAATTGTTTG+AGG | 0.435919 | 1.4:+14539360 | MS.gene31858:CDS |
| GTCTTTATTAAGACGAATAT+GGG | 0.438825 | 1.4:-14540613 | None:intergenic |
| ATGGCAAGCATTCTGTATCT+AGG | 0.443642 | 1.4:+14538510 | MS.gene31858:CDS |
| TTTCAGGAAAAGAATGCAAA+AGG | 0.444830 | 1.4:+14541843 | MS.gene31858:intron |
| TGCTAAAGGAAAACAATGTT+AGG | 0.452653 | 1.4:+14540991 | MS.gene31858:CDS |
| AAATGGAACTCCAAGATAAA+GGG | 0.456731 | 1.4:-14540328 | None:intergenic |
| ATACGCCCGTGGTGACCAAA+AGG | 0.466978 | 1.4:+14539736 | MS.gene31858:CDS |
| AGACAAGCAGCACAAGAACT+AGG | 0.468147 | 1.4:+14540297 | MS.gene31858:CDS |
| GCAAGACGGCTTTCTCATGC+AGG | 0.493184 | 1.4:+14539785 | MS.gene31858:CDS |
| AGCAAGGCAAAGACAGCCAT+TGG | 0.494950 | 1.4:-14539337 | None:intergenic |
| TGCTTCTGCAGGGTATCGGT+AGG | 0.511320 | 1.4:+14542078 | MS.gene31858:intron |
| CCATTTGACAAACGTGTGCA+AGG | 0.522458 | 1.4:-14540686 | None:intergenic |
| GCATCTAGCTGTGGCATCGA+TGG | 0.535310 | 1.4:+14539393 | MS.gene31858:CDS |
| AGAAACTATGCTTGATCCAA+TGG | 0.538193 | 1.4:+14539321 | MS.gene31858:CDS |
| TTTCTGCTTCTGCAGGGTAT+CGG | 0.538796 | 1.4:+14542074 | MS.gene31858:intron |
| AATTGTTTGAGGACTACGTT+GGG | 0.542530 | 1.4:+14539371 | MS.gene31858:CDS |
| TCACAGTTAACAGCTGCTAA+AGG | 0.543933 | 1.4:+14540390 | MS.gene31858:CDS |
| TTGTAATCCCGCATTTGATG+TGG | 0.559168 | 1.4:+14542115 | MS.gene31858:CDS |
| TCATCATCCACATCAAATGC+GGG | 0.564111 | 1.4:-14542122 | None:intergenic |
| GACAAGCAGCACAAGAACTA+GGG | 0.568521 | 1.4:+14540298 | MS.gene31858:CDS |
| TTGCTTCAGATTCTGCGCGT+TGG | 0.569217 | 1.4:-14539766 | None:intergenic |
| AGTGATCCAGTACAAAGGAA+TGG | 0.575083 | 1.4:+14538476 | MS.gene31858:CDS |
| TTCATCATCCACATCAAATG+CGG | 0.576696 | 1.4:-14542123 | None:intergenic |
| TACGCCCGTGGTGACCAAAA+GGG | 0.580284 | 1.4:+14539737 | MS.gene31858:CDS |
| CATTTGACAAACGTGTGCAA+GGG | 0.591607 | 1.4:-14540685 | None:intergenic |
| TGAACTAGTTGATGAAAGTG+AGG | 0.593363 | 1.4:+14539423 | MS.gene31858:CDS |
| ACACTTTGTTGAATTCCTTG+TGG | 0.595314 | 1.4:+14540634 | MS.gene31858:CDS |
| CAATCGGTGAACAATGGTGA+AGG | 0.600934 | 1.4:+14538054 | None:intergenic |
| ACTGAGTATTACGATATCCT+CGG | 0.601583 | 1.4:+14538079 | MS.gene31858:CDS |
| AGCAAGACATTTAAAACGAG+TGG | 0.602834 | 1.4:+14540567 | MS.gene31858:CDS |
| GGAAAACAATGTTAGGAGAG+AGG | 0.610717 | 1.4:+14540998 | MS.gene31858:CDS |
| CAATTCACTTCCAAAGAGCA+AGG | 0.618269 | 1.4:-14539353 | None:intergenic |
| GTTGACATGTTACATACCAT+CGG | 0.620443 | 1.4:+14540261 | MS.gene31858:CDS |
| CATCAAATGCGGGATTACAA+AGG | 0.620613 | 1.4:-14542112 | None:intergenic |
| CTACGTTGGGCATCTAGCTG+TGG | 0.622099 | 1.4:+14539384 | MS.gene31858:CDS |
| GTACTGGATCACTCAAAACC+TGG | 0.623501 | 1.4:-14538466 | None:intergenic |
| ATGTAACATGTCAACTCCAA+AGG | 0.625451 | 1.4:-14540253 | None:intergenic |
| GAATTGTTTGAGGACTACGT+TGG | 0.628017 | 1.4:+14539370 | MS.gene31858:CDS |
| ATTTGATGTGGATGATGAAG+AGG | 0.632418 | 1.4:+14542127 | MS.gene31858:CDS |
| ATTTGATCATCAGAAGCAGA+AGG | 0.634834 | 1.4:-14538109 | None:intergenic |
| TCTTGAGTATATATAGCCGA+TGG | 0.634847 | 1.4:-14540277 | None:intergenic |
| CTTGTGGAAGTTGAATGTAG+TGG | 0.643037 | 1.4:+14540650 | MS.gene31858:CDS |
| CACTACATTCAACTTCCACA+AGG | 0.647745 | 1.4:-14540649 | None:intergenic |
| TTTCTCAGTCAATACGCCCG+TGG | 0.660853 | 1.4:+14539725 | MS.gene31858:CDS |
| GCGCAGAATCTGAAGCAAGA+CGG | 0.674097 | 1.4:+14539771 | MS.gene31858:CDS |
| GCTGTTGATTCTGATGACGA+AGG | 0.696678 | 1.4:+14541888 | MS.gene31858:CDS |
| AAGCAGAAGGAGAAACTCCG+AGG | 0.719943 | 1.4:-14538096 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAGTTTAAAAAATTGAAG+TGG | - | chr1.4:14538710-14538729 | None:intergenic | 15.0% |
| !! | ACGAAATATTAATATATTGA+AGG | + | chr1.4:14539285-14539304 | MS.gene31858:intron | 15.0% |
| !! | CGAAATATTAATATATTGAA+GGG | + | chr1.4:14539286-14539305 | MS.gene31858:intron | 15.0% |
| !! | TTTAATTATATAGACATTAG+TGG | - | chr1.4:14540030-14540049 | None:intergenic | 15.0% |
| !!! | AAAAAACTAAGTTTATGTTT+TGG | + | chr1.4:14539535-14539554 | MS.gene31858:intron | 15.0% |
| !!! | AAACATAAACTTAGTTTTTT+TGG | - | chr1.4:14539535-14539554 | None:intergenic | 15.0% |
| !!! | AACAAAAAAGTAAAACATTT+TGG | + | chr1.4:14541391-14541410 | MS.gene31858:intron | 15.0% |
| !!! | AACATAAACTTAGTTTTTTT+GGG | - | chr1.4:14539534-14539553 | None:intergenic | 15.0% |
| !!! | GAGAATTATATAGTATTTTA+TGG | - | chr1.4:14541685-14541704 | None:intergenic | 15.0% |
| !!! | TATTCATTTTACATCAAAAT+TGG | + | chr1.4:14539947-14539966 | MS.gene31858:intron | 15.0% |
| !! | AAAATTCACAATTTCAATCT+TGG | - | chr1.4:14538226-14538245 | None:intergenic | 20.0% |
| !! | AAATAAATAAAGTAGGATTC+AGG | - | chr1.4:14538555-14538574 | None:intergenic | 20.0% |
| !! | ACTATTACATATTTATGTGT+CGG | + | chr1.4:14538724-14538743 | MS.gene31858:intron | 20.0% |
| !! | CAATTGACATTTAAATGAAA+GGG | - | chr1.4:14540450-14540469 | None:intergenic | 20.0% |
| !! | TAGTATATATTGTCAAATAG+TGG | + | chr1.4:14541516-14541535 | MS.gene31858:intron | 20.0% |
| !! | TTAATAAGTCTTGCATTTAT+AGG | - | chr1.4:14541607-14541626 | None:intergenic | 20.0% |
| !!! | ACGTTAAATTTTGGTAAATT+TGG | - | chr1.4:14541644-14541663 | None:intergenic | 20.0% |
| !!! | ATTATGTTATTGGTAGATTT+TGG | + | chr1.4:14538433-14538452 | MS.gene31858:intron | 20.0% |
| !!! | ATTTTGCTTAATTACATTAC+AGG | + | chr1.4:14538241-14538260 | MS.gene31858:intron | 20.0% |
| !!! | GTATTTTATGGTAAAAATAG+AGG | - | chr1.4:14541673-14541692 | None:intergenic | 20.0% |
| !!! | TTAAATTACAGTAGACTTTT+TGG | + | chr1.4:14539014-14539033 | MS.gene31858:intron | 20.0% |
| !!! | TTATGTTATTGGTAGATTTT+GGG | + | chr1.4:14538434-14538453 | MS.gene31858:intron | 20.0% |
| !!! | TTTTTTATTGATAACACACA+AGG | + | chr1.4:14541740-14541759 | MS.gene31858:intron | 20.0% |
| ! | AATACAAAGCCATTATAGAT+TGG | + | chr1.4:14538949-14538968 | MS.gene31858:intron | 25.0% |
| ! | AATTAAATGGAATGTAGTTG+TGG | - | chr1.4:14541163-14541182 | None:intergenic | 25.0% |
| ! | ACAACTACATTCCATTTAAT+TGG | + | chr1.4:14541162-14541181 | MS.gene31858:intron | 25.0% |
| ! | AGAGAGAAAAACCATAAAAT+CGG | + | chr1.4:14541237-14541256 | MS.gene31858:intron | 25.0% |
| ! | AGCAATTTAGTACAAGTAAA+CGG | - | chr1.4:14539234-14539253 | None:intergenic | 25.0% |
| ! | ATATTGTGCACATATGATTT+AGG | + | chr1.4:14540510-14540529 | MS.gene31858:intron | 25.0% |
| ! | ATTATGCTTTGCTTCAAAAT+AGG | + | chr1.4:14539655-14539674 | MS.gene31858:intron | 25.0% |
| ! | GAAAAGAGAAAAGAAAACAA+GGG | + | chr1.4:14539173-14539192 | MS.gene31858:intron | 25.0% |
| ! | GCAATTGACATTTAAATGAA+AGG | - | chr1.4:14540451-14540470 | None:intergenic | 25.0% |
| ! | GCATTTATAGGATAAGAATT+TGG | - | chr1.4:14541595-14541614 | None:intergenic | 25.0% |
| ! | GTCTTTATTAAGACGAATAT+GGG | - | chr1.4:14540616-14540635 | None:intergenic | 25.0% |
| ! | TAAATATTGAATGCAACACA+TGG | + | chr1.4:14539867-14539886 | MS.gene31858:intron | 25.0% |
| ! | TATAGCATGTTACTATATCA+AGG | + | chr1.4:14540062-14540081 | MS.gene31858:intron | 25.0% |
| ! | TATGGTAAAAATAGAGGATT+TGG | - | chr1.4:14541667-14541686 | None:intergenic | 25.0% |
| ! | TGCTTGCATTAAAACTAAAA+TGG | - | chr1.4:14541274-14541293 | None:intergenic | 25.0% |
| ! | TGTCTTTATTAAGACGAATA+TGG | - | chr1.4:14540617-14540636 | None:intergenic | 25.0% |
| ! | TTAAATGTAATCACATGTCT+CGG | - | chr1.4:14538682-14538701 | None:intergenic | 25.0% |
| ! | TTATGAGAATTGAAACGAAA+GGG | + | chr1.4:14540930-14540949 | MS.gene31858:intron | 25.0% |
| ! | TTCCTCTATTAACTGATATA+AGG | + | chr1.4:14541809-14541828 | MS.gene31858:intron | 25.0% |
| ! | TTGCTATATTTCTTCACTTA+AGG | + | chr1.4:14539249-14539268 | MS.gene31858:intron | 25.0% |
| ! | TTTATGAGAATTGAAACGAA+AGG | + | chr1.4:14540929-14540948 | MS.gene31858:intron | 25.0% |
| !! | AAATTTTGGATAAGTGACTA+TGG | - | chr1.4:14539112-14539131 | None:intergenic | 25.0% |
| !! | AATGCTGCTATTTATTAACT+TGG | - | chr1.4:14541444-14541463 | None:intergenic | 25.0% |
| !! | CTATTTATTAACTTGGAATG+TGG | - | chr1.4:14541437-14541456 | None:intergenic | 25.0% |
| !! | CTTATTAGAAGTGTGTTATT+CGG | + | chr1.4:14540473-14540492 | MS.gene31858:intron | 25.0% |
| !! | GAGGTTTATTTGTATTTTCA+AGG | + | chr1.4:14539557-14539576 | MS.gene31858:intron | 25.0% |
| !!! | AAACTAAGTTTATGTTTTGG+AGG | + | chr1.4:14539538-14539557 | MS.gene31858:intron | 25.0% |
| !!! | GTCAACTAGTTTAAATTTTC+AGG | - | chr1.4:14539920-14539939 | None:intergenic | 25.0% |
| !!! | TAGTTTAAATTTTCAGGAAG+AGG | - | chr1.4:14539914-14539933 | None:intergenic | 25.0% |
| AAATGGAACTCCAAGATAAA+GGG | - | chr1.4:14540331-14540350 | None:intergenic | 30.0% | |
| AATTCTACCTGCATTTATTG+GGG | + | chr1.4:14539814-14539833 | MS.gene31858:intron | 30.0% | |
| AATTCTTGGGAAGATATTTC+AGG | + | chr1.4:14541049-14541068 | MS.gene31858:CDS | 30.0% | |
| ACATAAATCACCATAGTTCA+TGG | - | chr1.4:14540004-14540023 | None:intergenic | 30.0% | |
| ACTTAGACACCAATCTATAA+TGG | - | chr1.4:14538961-14538980 | None:intergenic | 30.0% | |
| AGGAATGGATATGATCAAAA+TGG | + | chr1.4:14538491-14538510 | MS.gene31858:CDS | 30.0% | |
| ATCGTTATTGTTACGCAATA+TGG | + | chr1.4:14540135-14540154 | MS.gene31858:intron | 30.0% | |
| ATCTTTCGTCAAAGATTGAT+AGG | - | chr1.4:14541302-14541321 | None:intergenic | 30.0% | |
| ATTCATTATAAGAGAAACCG+TGG | - | chr1.4:14539630-14539649 | None:intergenic | 30.0% | |
| ATTGAGATCTGGTGAAAAAT+TGG | + | chr1.4:14541335-14541354 | MS.gene31858:intron | 30.0% | |
| CAATCTTTGACGAAAGATTA+AGG | + | chr1.4:14541304-14541323 | MS.gene31858:intron | 30.0% | |
| CAATTATATGCAATTGTGCT+TGG | - | chr1.4:14539840-14539859 | None:intergenic | 30.0% | |
| CAATTTAGTACAAGTAAACG+GGG | - | chr1.4:14539232-14539251 | None:intergenic | 30.0% | |
| CACCTTATATCAGTTAATAG+AGG | - | chr1.4:14541814-14541833 | None:intergenic | 30.0% | |
| GAAACTAGTTCAGTCAAATT+CGG | - | chr1.4:14541558-14541577 | None:intergenic | 30.0% | |
| GAATTCTACCTGCATTTATT+GGG | + | chr1.4:14539813-14539832 | MS.gene31858:intron | 30.0% | |
| GATCAATGTTTAGACATGAT+TGG | + | chr1.4:14538805-14538824 | MS.gene31858:intron | 30.0% | |
| GCAAATTCCTCAAAATGAAT+AGG | + | chr1.4:14539151-14539170 | MS.gene31858:intron | 30.0% | |
| GCAATTTAGTACAAGTAAAC+GGG | - | chr1.4:14539233-14539252 | None:intergenic | 30.0% | |
| GGAAAAGAGAAAAGAAAACA+AGG | + | chr1.4:14539172-14539191 | MS.gene31858:intron | 30.0% | |
| GTATTCTCTGATTGCATATA+TGG | + | chr1.4:14538859-14538878 | MS.gene31858:intron | 30.0% | |
| TATCGTACCTGATTGAAAAA+GGG | - | chr1.4:14541972-14541991 | None:intergenic | 30.0% | |
| TATCTCAACAAATATCTGTG+CGG | + | chr1.4:14538604-14538623 | MS.gene31858:intron | 30.0% | |
| TCAAAATAGGAAGTCCAAAA+AGG | + | chr1.4:14539668-14539687 | MS.gene31858:intron | 30.0% | |
| TCGCAAAGCTTATTATCATA+AGG | + | chr1.4:14538132-14538151 | MS.gene31858:CDS | 30.0% | |
| TGAATTCTACCTGCATTTAT+TGG | + | chr1.4:14539812-14539831 | MS.gene31858:intron | 30.0% | |
| TGCTAAAGGAAAACAATGTT+AGG | + | chr1.4:14540991-14541010 | MS.gene31858:CDS | 30.0% | |
| TGTAGACTGTATTATAAAGC+CGG | - | chr1.4:14541205-14541224 | None:intergenic | 30.0% | |
| TTAAATGAAAGGGTTGCTAA+TGG | - | chr1.4:14540440-14540459 | None:intergenic | 30.0% | |
| TTTAGACATGATTGGTATGT+AGG | + | chr1.4:14538813-14538832 | MS.gene31858:intron | 30.0% | |
| TTTCACCAGATCTCAATAAT+CGG | - | chr1.4:14541332-14541351 | None:intergenic | 30.0% | |
| TTTCAGGAAAAGAATGCAAA+AGG | + | chr1.4:14541843-14541862 | MS.gene31858:intron | 30.0% | |
| ! | AAAGCTAGCAAGATTTTTGA+AGG | + | chr1.4:14539700-14539719 | MS.gene31858:CDS | 30.0% |
| ! | AGGATTTGGACGTTAAATTT+TGG | - | chr1.4:14541653-14541672 | None:intergenic | 30.0% |
| ! | ATCCTAACATTCAGCTTTTT+AGG | + | chr1.4:14541101-14541120 | MS.gene31858:intron | 30.0% |
| ! | CGTTTTGTACTACGAAATTT+TGG | - | chr1.4:14539126-14539145 | None:intergenic | 30.0% |
| ! | CTCTTTTCCTATTCATTTTG+AGG | - | chr1.4:14539161-14539180 | None:intergenic | 30.0% |
| ! | TAAATATTTCTGCTTCTGCA+GGG | + | chr1.4:14542068-14542087 | MS.gene31858:intron | 30.0% |
| ! | TTCGCAATAAAGGACATTTT+TGG | + | chr1.4:14540364-14540383 | MS.gene31858:CDS | 30.0% |
| ! | TTTAAGCTTGTGTTTCTAAC+CGG | - | chr1.4:14538999-14539018 | None:intergenic | 30.0% |
| !!! | TAGACTTTTTGGTTTTGTTG+TGG | + | chr1.4:14539025-14539044 | MS.gene31858:intron | 30.0% |
| AATAGGAAGTCCAAAAAGGA+AGG | + | chr1.4:14539672-14539691 | MS.gene31858:intron | 35.0% | |
| AATTGTTTGAGGACTACGTT+GGG | + | chr1.4:14539371-14539390 | MS.gene31858:CDS | 35.0% | |
| ACACTTTGTTGAATTCCTTG+TGG | + | chr1.4:14540634-14540653 | MS.gene31858:CDS | 35.0% | |
| ACTCATAACTCTGTTATTGC+AGG | + | chr1.4:14540968-14540987 | MS.gene31858:intron | 35.0% | |
| ACTGAGTATTACGATATCCT+CGG | + | chr1.4:14538079-14538098 | MS.gene31858:CDS | 35.0% | |
| AGAAACTATGCTTGATCCAA+TGG | + | chr1.4:14539321-14539340 | MS.gene31858:CDS | 35.0% | |
| AGGGTCTTAGTCCAATTAAA+TGG | - | chr1.4:14541176-14541195 | None:intergenic | 35.0% | |
| ATAGGAAGTCCAAAAAGGAA+GGG | + | chr1.4:14539673-14539692 | MS.gene31858:intron | 35.0% | |
| ATGTAACATGTCAACTCCAA+AGG | - | chr1.4:14540256-14540275 | None:intergenic | 35.0% | |
| ATTACCACCATGTCAAATAG+CGG | + | chr1.4:14540087-14540106 | MS.gene31858:intron | 35.0% | |
| ATTATAAAGCCGGCTAAAGA+GGG | - | chr1.4:14541195-14541214 | None:intergenic | 35.0% | |
| ATTGAAAAAGGGAGTTCGAT+AGG | - | chr1.4:14541961-14541980 | None:intergenic | 35.0% | |
| ATTTGATCATCAGAAGCAGA+AGG | - | chr1.4:14538112-14538131 | None:intergenic | 35.0% | |
| ATTTGATGTGGATGATGAAG+AGG | + | chr1.4:14542127-14542146 | MS.gene31858:CDS | 35.0% | |
| CAACCGCTCTTAAAATTCTT+GGG | + | chr1.4:14541036-14541055 | MS.gene31858:CDS | 35.0% | |
| CATGAAGCCATGAAACTATA+AGG | + | chr1.4:14540839-14540858 | MS.gene31858:intron | 35.0% | |
| CTATCGTACCTGATTGAAAA+AGG | - | chr1.4:14541973-14541992 | None:intergenic | 35.0% | |
| CTCCTAAAAAGCTGAATGTT+AGG | - | chr1.4:14541106-14541125 | None:intergenic | 35.0% | |
| CTTATAGTTTCATGGCTTCA+TGG | - | chr1.4:14540841-14540860 | None:intergenic | 35.0% | |
| GAAATGGAACTCCAAGATAA+AGG | - | chr1.4:14540332-14540351 | None:intergenic | 35.0% | |
| GAATGTAGTTGTGGATAACA+AGG | - | chr1.4:14541154-14541173 | None:intergenic | 35.0% | |
| GTAACAAAACTCCAATTCCA+CGG | + | chr1.4:14539610-14539629 | MS.gene31858:intron | 35.0% | |
| GTACGAACCTTATAGTTTCA+TGG | - | chr1.4:14540849-14540868 | None:intergenic | 35.0% | |
| GTCTAAGTCACAATTCTACT+TGG | + | chr1.4:14538973-14538992 | MS.gene31858:intron | 35.0% | |
| GTTGACATGTTACATACCAT+CGG | + | chr1.4:14540261-14540280 | MS.gene31858:CDS | 35.0% | |
| TACTTGAGCCTAATGTATCA+GGG | + | chr1.4:14540866-14540885 | MS.gene31858:intron | 35.0% | |
| TAGCAGTTATAATGACGCTA+TGG | + | chr1.4:14540182-14540201 | MS.gene31858:intron | 35.0% | |
| TATAAGAGAAACCGTGGAAT+TGG | - | chr1.4:14539624-14539643 | None:intergenic | 35.0% | |
| TATTATAAAGCCGGCTAAAG+AGG | - | chr1.4:14541196-14541215 | None:intergenic | 35.0% | |
| TCACTAATCCCTGATACATT+AGG | - | chr1.4:14540877-14540896 | None:intergenic | 35.0% | |
| TCATATCCATTCCTTTGTAC+TGG | - | chr1.4:14538485-14538504 | None:intergenic | 35.0% | |
| TCTTGAGTATATATAGCCGA+TGG | - | chr1.4:14540280-14540299 | None:intergenic | 35.0% | |
| TTATCTTGGAGTTCCATTTC+TGG | + | chr1.4:14540332-14540351 | MS.gene31858:CDS | 35.0% | |
| TTCATCATCCACATCAAATG+CGG | - | chr1.4:14542126-14542145 | None:intergenic | 35.0% | |
| ! | AGCAAGACATTTAAAACGAG+TGG | + | chr1.4:14540567-14540586 | MS.gene31858:CDS | 35.0% |
| ! | ATATGGGAGTCAACATTTTC+AGG | - | chr1.4:14540600-14540619 | None:intergenic | 35.0% |
| ! | ATGTAGGTTGAGTATTAGAC+AGG | + | chr1.4:14538829-14538848 | MS.gene31858:intron | 35.0% |
| ! | CATTGCGCACAAAACTTTTA+AGG | - | chr1.4:14539052-14539071 | None:intergenic | 35.0% |
| ! | CTTTGGAAGTGAATTGTTTG+AGG | + | chr1.4:14539360-14539379 | MS.gene31858:CDS | 35.0% |
| ! | GGGTCTTATCACAATGATAT+TGG | - | chr1.4:14539514-14539533 | None:intergenic | 35.0% |
| ! | GTAAATATTTCTGCTTCTGC+AGG | + | chr1.4:14542067-14542086 | MS.gene31858:intron | 35.0% |
| ! | TATGGGAGTCAACATTTTCA+GGG | - | chr1.4:14540599-14540618 | None:intergenic | 35.0% |
| !! | CTTCCCAAGAATTTTAAGAG+CGG | - | chr1.4:14541042-14541061 | None:intergenic | 35.0% |
| !! | GAATTTGGTGTTGTCAATCA+CGG | - | chr1.4:14541580-14541599 | None:intergenic | 35.0% |
| !! | TGAACTAGTTGATGAAAGTG+AGG | + | chr1.4:14539423-14539442 | MS.gene31858:CDS | 35.0% |
| !! | TTTTGAGTGATCCAGTACAA+AGG | + | chr1.4:14538471-14538490 | MS.gene31858:CDS | 35.0% |
| !!! | GCAGTCATGGTTTTGAATTA+CGG | - | chr1.4:14539082-14539101 | None:intergenic | 35.0% |
| !!! | GGATCGTTTTGATTTCTATC+AGG | - | chr1.4:14538281-14538300 | None:intergenic | 35.0% |
| !!! | TCATGGTTTTGAATTACGGT+TGG | - | chr1.4:14539078-14539097 | None:intergenic | 35.0% |
| AAGTCACAATTCTACTTGGC+CGG | + | chr1.4:14538977-14538996 | MS.gene31858:intron | 40.0% | |
| AGCACAAGAACTAGGGAAAA+AGG | + | chr1.4:14540305-14540324 | MS.gene31858:CDS | 40.0% | |
| AGTGATCCAGTACAAAGGAA+TGG | + | chr1.4:14538476-14538495 | MS.gene31858:CDS | 40.0% | |
| ATCATGCTTGCCATGAACTA+TGG | + | chr1.4:14539991-14540010 | MS.gene31858:intron | 40.0% | |
| ATGGCAAGCATTCTGTATCT+AGG | + | chr1.4:14538510-14538529 | MS.gene31858:CDS | 40.0% | |
| CAAGCATAGTTTCTCTGTCA+AGG | - | chr1.4:14539315-14539334 | None:intergenic | 40.0% | |
| CAATTCACTTCCAAAGAGCA+AGG | - | chr1.4:14539356-14539375 | None:intergenic | 40.0% | |
| CACTACATTCAACTTCCACA+AGG | - | chr1.4:14540652-14540671 | None:intergenic | 40.0% | |
| CATCAAATGCGGGATTACAA+AGG | - | chr1.4:14542115-14542134 | None:intergenic | 40.0% | |
| CATTTGACAAACGTGTGCAA+GGG | - | chr1.4:14540688-14540707 | None:intergenic | 40.0% | |
| CTTGTGGAAGTTGAATGTAG+TGG | + | chr1.4:14540650-14540669 | MS.gene31858:CDS | 40.0% | |
| GAATTGTTTGAGGACTACGT+TGG | + | chr1.4:14539370-14539389 | MS.gene31858:CDS | 40.0% | |
| GCAACCGCTCTTAAAATTCT+TGG | + | chr1.4:14541035-14541054 | MS.gene31858:CDS | 40.0% | |
| GCAATGACACTTTCGATTGA+AGG | + | chr1.4:14538639-14538658 | MS.gene31858:intron | 40.0% | |
| GGAAAACAATGTTAGGAGAG+AGG | + | chr1.4:14540998-14541017 | MS.gene31858:CDS | 40.0% | |
| GGATTTGCAGGAGAAGTTAA+AGG | + | chr1.4:14539444-14539463 | MS.gene31858:CDS | 40.0% | |
| GTACTTGAGCCTAATGTATC+AGG | + | chr1.4:14540865-14540884 | MS.gene31858:intron | 40.0% | |
| GTTATAGCCGCTATTTGACA+TGG | - | chr1.4:14540097-14540116 | None:intergenic | 40.0% | |
| GTTTCATGGCTTCATGGTAT+CGG | - | chr1.4:14540835-14540854 | None:intergenic | 40.0% | |
| TAAGGTGATGTGCTTCTTTC+AGG | + | chr1.4:14541827-14541846 | MS.gene31858:intron | 40.0% | |
| TCACAGTTAACAGCTGCTAA+AGG | + | chr1.4:14540390-14540409 | MS.gene31858:CDS | 40.0% | |
| TCATCATCCACATCAAATGC+GGG | - | chr1.4:14542125-14542144 | None:intergenic | 40.0% | |
| TCCAGTGTCTTCATTTGTGT+CGG | + | chr1.4:14538758-14538777 | MS.gene31858:intron | 40.0% | |
| TCTGTTATTGCAGGTGCTAA+AGG | + | chr1.4:14540977-14540996 | MS.gene31858:intron | 40.0% | |
| TGAAATTTGTGCGCAGCATT+GGG | - | chr1.4:14538302-14538321 | None:intergenic | 40.0% | |
| TGATGAAAGTGAGGATTTGC+AGG | + | chr1.4:14539432-14539451 | MS.gene31858:CDS | 40.0% | |
| TGCTGAGTTCTTCTTGAAGT+TGG | - | chr1.4:14540551-14540570 | None:intergenic | 40.0% | |
| TTGAAACGAAAGGGCTATAG+AGG | + | chr1.4:14540939-14540958 | MS.gene31858:intron | 40.0% | |
| TTGTAATCCCGCATTTGATG+TGG | + | chr1.4:14542115-14542134 | MS.gene31858:CDS | 40.0% | |
| TTTCATGGCTTCATGGTATC+GGG | - | chr1.4:14540834-14540853 | None:intergenic | 40.0% | |
| ! | GCTTTTCTTCCCTTCCTTTT+TGG | - | chr1.4:14539685-14539704 | None:intergenic | 40.0% |
| ! | GGTTTTTCTCTCTCGTCTAA+CGG | - | chr1.4:14541230-14541249 | None:intergenic | 40.0% |
| !! | AGGTACCGATTATTGAGATC+TGG | + | chr1.4:14541324-14541343 | MS.gene31858:intron | 40.0% |
| !! | AGTTCCATTTCTGGCTGAAT+GGG | + | chr1.4:14540341-14540360 | MS.gene31858:CDS | 40.0% |
| !! | ATCTTCTGCAGCCGATTTTA+TGG | - | chr1.4:14541251-14541270 | None:intergenic | 40.0% |
| !!! | TCGAACTCCCTTTTTCAATC+AGG | + | chr1.4:14541962-14541981 | MS.gene31858:CDS | 40.0% |
| AAAGGCTGCAACATTGACAC+GGG | - | chr1.4:14540238-14540257 | None:intergenic | 45.0% | |
| ACCGACACAAATGAAGACAC+TGG | - | chr1.4:14538762-14538781 | None:intergenic | 45.0% | |
| AGACAAGCAGCACAAGAACT+AGG | + | chr1.4:14540297-14540316 | MS.gene31858:CDS | 45.0% | |
| ATAGCCGCTATTTGACATGG+TGG | - | chr1.4:14540094-14540113 | None:intergenic | 45.0% | |
| CAAAGGCTGCAACATTGACA+CGG | - | chr1.4:14540239-14540258 | None:intergenic | 45.0% | |
| CAATGCTGCGCACAAATTTC+AGG | + | chr1.4:14538301-14538320 | MS.gene31858:CDS | 45.0% | |
| CCATTTGACAAACGTGTGCA+AGG | - | chr1.4:14540689-14540708 | None:intergenic | 45.0% | |
| CCTTGCACACGTTTGTCAAA+TGG | + | chr1.4:14540686-14540705 | MS.gene31858:CDS | 45.0% | |
| CTGAAATTTGTGCGCAGCAT+TGG | - | chr1.4:14538303-14538322 | None:intergenic | 45.0% | |
| GACAAGCAGCACAAGAACTA+GGG | + | chr1.4:14540298-14540317 | MS.gene31858:CDS | 45.0% | |
| GGGAAAAAGGCCCTTTATCT+TGG | + | chr1.4:14540318-14540337 | MS.gene31858:CDS | 45.0% | |
| GTACTGGATCACTCAAAACC+TGG | - | chr1.4:14538469-14538488 | None:intergenic | 45.0% | |
| TTTCTGCTTCTGCAGGGTAT+CGG | + | chr1.4:14542074-14542093 | MS.gene31858:intron | 45.0% | |
| ! | AGAAACCCTTTTGGTCACCA+CGG | - | chr1.4:14539745-14539764 | None:intergenic | 45.0% |
| ! | ATTTTCACAAGAGCCCTTGC+TGG | + | chr1.4:14538924-14538943 | MS.gene31858:intron | 45.0% |
| ! | CTATGGTAATGTCGCAGTCA+TGG | - | chr1.4:14539095-14539114 | None:intergenic | 45.0% |
| ! | GCTGAATGGGTTCGCAATAA+AGG | + | chr1.4:14540354-14540373 | MS.gene31858:CDS | 45.0% |
| ! | GGCTTTGTATTAGCCAGCAA+GGG | - | chr1.4:14538940-14538959 | None:intergenic | 45.0% |
| ! | GTAAACGGGGTGTCAACTTA+TGG | - | chr1.4:14539219-14539238 | None:intergenic | 45.0% |
| !! | GAGTTCCATTTCTGGCTGAA+TGG | + | chr1.4:14540340-14540359 | MS.gene31858:CDS | 45.0% |
| !! | GATTTTGGGAGAAGCATACC+AGG | + | chr1.4:14538448-14538467 | MS.gene31858:intron | 45.0% |
| !! | GCTGTTGATTCTGATGACGA+AGG | + | chr1.4:14541888-14541907 | MS.gene31858:CDS | 45.0% |
| !! | TGGCTTTGTATTAGCCAGCA+AGG | - | chr1.4:14538941-14538960 | None:intergenic | 45.0% |
| !! | AATAAATAAATAAATAAAGT+AGG | - | chr1.4:14538562-14538581 | None:intergenic | 5.0% |
| !! | TATAATTTAAATTATGTTAT+TGG | + | chr1.4:14538423-14538442 | MS.gene31858:intron | 5.0% |
| AAGCAGAAGGAGAAACTCCG+AGG | - | chr1.4:14538099-14538118 | None:intergenic | 50.0% | |
| AGCAAGGCAAAGACAGCCAT+TGG | - | chr1.4:14539340-14539359 | None:intergenic | 50.0% | |
| CGAACCCATTCAGCCAGAAA+TGG | - | chr1.4:14540348-14540367 | None:intergenic | 50.0% | |
| CGTGTCAATGTTGCAGCCTT+TGG | + | chr1.4:14540237-14540256 | MS.gene31858:intron | 50.0% | |
| GCTGTCTTTGCCTTGCTCTT+TGG | + | chr1.4:14539343-14539362 | MS.gene31858:CDS | 50.0% | |
| GGACTAAGACCCTCTTTAGC+CGG | + | chr1.4:14541183-14541202 | MS.gene31858:intron | 50.0% | |
| TGCTTGGCCCCAATAAATGC+AGG | - | chr1.4:14539824-14539843 | None:intergenic | 50.0% | |
| TTGCTTCAGATTCTGCGCGT+TGG | - | chr1.4:14539769-14539788 | None:intergenic | 50.0% | |
| TTTCTCAGTCAATACGCCCG+TGG | + | chr1.4:14539725-14539744 | MS.gene31858:CDS | 50.0% | |
| ! | GAAACCCTTTTGGTCACCAC+GGG | - | chr1.4:14539744-14539763 | None:intergenic | 50.0% |
| ! | GCGCAGAATCTGAAGCAAGA+CGG | + | chr1.4:14539771-14539790 | MS.gene31858:CDS | 50.0% |
| !! | CGCGTTGGTAGAAACCCTTT+TGG | - | chr1.4:14539754-14539773 | None:intergenic | 50.0% |
| ATACGCCCGTGGTGACCAAA+AGG | + | chr1.4:14539736-14539755 | MS.gene31858:CDS | 55.0% | |
| CTACGTTGGGCATCTAGCTG+TGG | + | chr1.4:14539384-14539403 | MS.gene31858:CDS | 55.0% | |
| GCAAGACGGCTTTCTCATGC+AGG | + | chr1.4:14539785-14539804 | MS.gene31858:CDS | 55.0% | |
| TACGCCCGTGGTGACCAAAA+GGG | + | chr1.4:14539737-14539756 | MS.gene31858:CDS | 55.0% | |
| ! | GCATCTAGCTGTGGCATCGA+TGG | + | chr1.4:14539393-14539412 | MS.gene31858:CDS | 55.0% |
| !! | TGCTTCTGCAGGGTATCGGT+AGG | + | chr1.4:14542078-14542097 | MS.gene31858:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 14538067 | 14542172 | 14538067 | ID=MS.gene31858 |
| chr1.4 | mRNA | 14538067 | 14542172 | 14538067 | ID=MS.gene31858.t1;Parent=MS.gene31858 |
| chr1.4 | exon | 14538067 | 14538153 | 14538067 | ID=MS.gene31858.t1.exon1;Parent=MS.gene31858.t1 |
| chr1.4 | CDS | 14538067 | 14538153 | 14538067 | ID=cds.MS.gene31858.t1;Parent=MS.gene31858.t1 |
| chr1.4 | exon | 14538263 | 14538322 | 14538263 | ID=MS.gene31858.t1.exon2;Parent=MS.gene31858.t1 |
| chr1.4 | CDS | 14538263 | 14538322 | 14538263 | ID=cds.MS.gene31858.t1;Parent=MS.gene31858.t1 |
| chr1.4 | exon | 14538449 | 14538531 | 14538449 | ID=MS.gene31858.t1.exon3;Parent=MS.gene31858.t1 |
| chr1.4 | CDS | 14538449 | 14538531 | 14538449 | ID=cds.MS.gene31858.t1;Parent=MS.gene31858.t1 |
| chr1.4 | exon | 14539321 | 14539465 | 14539321 | ID=MS.gene31858.t1.exon4;Parent=MS.gene31858.t1 |
| chr1.4 | CDS | 14539321 | 14539465 | 14539321 | ID=cds.MS.gene31858.t1;Parent=MS.gene31858.t1 |
| chr1.4 | exon | 14539677 | 14539806 | 14539677 | ID=MS.gene31858.t1.exon5;Parent=MS.gene31858.t1 |
| chr1.4 | CDS | 14539677 | 14539806 | 14539677 | ID=cds.MS.gene31858.t1;Parent=MS.gene31858.t1 |
| chr1.4 | exon | 14540253 | 14540411 | 14540253 | ID=MS.gene31858.t1.exon6;Parent=MS.gene31858.t1 |
| chr1.4 | CDS | 14540253 | 14540411 | 14540253 | ID=cds.MS.gene31858.t1;Parent=MS.gene31858.t1 |
| chr1.4 | exon | 14540532 | 14540707 | 14540532 | ID=MS.gene31858.t1.exon7;Parent=MS.gene31858.t1 |
| chr1.4 | CDS | 14540532 | 14540707 | 14540532 | ID=cds.MS.gene31858.t1;Parent=MS.gene31858.t1 |
| chr1.4 | exon | 14540990 | 14541070 | 14540990 | ID=MS.gene31858.t1.exon8;Parent=MS.gene31858.t1 |
| chr1.4 | CDS | 14540990 | 14541070 | 14540990 | ID=cds.MS.gene31858.t1;Parent=MS.gene31858.t1 |
| chr1.4 | exon | 14541849 | 14541983 | 14541849 | ID=MS.gene31858.t1.exon9;Parent=MS.gene31858.t1 |
| chr1.4 | CDS | 14541849 | 14541983 | 14541849 | ID=cds.MS.gene31858.t1;Parent=MS.gene31858.t1 |
| chr1.4 | exon | 14542089 | 14542172 | 14542089 | ID=MS.gene31858.t1.exon10;Parent=MS.gene31858.t1 |
| chr1.4 | CDS | 14542089 | 14542172 | 14542089 | ID=cds.MS.gene31858.t1;Parent=MS.gene31858.t1 |
| Gene Sequence |
| Protein sequence |
