Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32187.t1 | XP_003608194.2 | 98.2 | 544 | 10 | 0 | 1 | 544 | 1 | 544 | 0.00E+00 | 1087.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32187.t1 | Q8GWA1 | 70.1 | 482 | 142 | 1 | 62 | 543 | 31 | 510 | 3.1e-202 | 706.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32187.t1 | G7JQS9 | 98.2 | 544 | 10 | 0 | 1 | 544 | 1 | 544 | 0.0e+00 | 1087.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051960 | MS.gene32187 | 0.801655 | 8.13E-49 | -1.69E-46 |
| MS.gene052053 | MS.gene32187 | 0.8131 | 3.04E-51 | -1.69E-46 |
| MS.gene052537 | MS.gene32187 | 0.906729 | 1.09E-80 | -1.69E-46 |
| MS.gene052570 | MS.gene32187 | 0.816384 | 5.69E-52 | -1.69E-46 |
| MS.gene055549 | MS.gene32187 | 0.803425 | 3.51E-49 | -1.69E-46 |
| MS.gene055550 | MS.gene32187 | 0.806381 | 8.45E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32187.t1 | MTR_4g090580 | 98.162 | 544 | 10 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1107 |
| MS.gene32187.t1 | MTR_5g071250 | 75.885 | 452 | 109 | 0 | 92 | 543 | 50 | 501 | 0.0 | 723 |
| MS.gene32187.t1 | MTR_3g464380 | 68.750 | 496 | 149 | 3 | 54 | 543 | 9 | 504 | 0.0 | 687 |
| MS.gene32187.t1 | MTR_5g071250 | 75.291 | 344 | 85 | 0 | 92 | 435 | 50 | 393 | 0.0 | 541 |
| MS.gene32187.t1 | MTR_4g091240 | 38.611 | 360 | 200 | 9 | 105 | 449 | 51 | 404 | 6.06e-72 | 240 |
| MS.gene32187.t1 | MTR_4g091240 | 34.167 | 120 | 70 | 3 | 428 | 543 | 464 | 578 | 3.49e-12 | 69.3 |
| MS.gene32187.t1 | MTR_2g011730 | 39.595 | 346 | 193 | 8 | 105 | 440 | 51 | 390 | 1.34e-71 | 239 |
| MS.gene32187.t1 | MTR_2g011730 | 36.667 | 120 | 67 | 3 | 428 | 543 | 464 | 578 | 3.01e-14 | 75.9 |
| MS.gene32187.t1 | MTR_4g045997 | 36.719 | 384 | 214 | 10 | 81 | 449 | 37 | 406 | 2.85e-67 | 227 |
| MS.gene32187.t1 | MTR_4g045997 | 36.579 | 380 | 220 | 9 | 81 | 449 | 37 | 406 | 4.69e-67 | 227 |
| MS.gene32187.t1 | MTR_4g045997 | 36.667 | 120 | 67 | 3 | 428 | 543 | 463 | 577 | 2.91e-15 | 79.0 |
| MS.gene32187.t1 | MTR_4g045993 | 35.150 | 367 | 200 | 10 | 105 | 455 | 44 | 388 | 2.42e-64 | 220 |
| MS.gene32187.t1 | MTR_4g045993 | 35.000 | 120 | 69 | 3 | 428 | 543 | 455 | 569 | 9.76e-13 | 71.2 |
| MS.gene32187.t1 | MTR_4g091240 | 35.644 | 303 | 176 | 8 | 162 | 449 | 2 | 300 | 1.56e-51 | 183 |
| MS.gene32187.t1 | MTR_4g091240 | 34.167 | 120 | 70 | 3 | 428 | 543 | 360 | 474 | 2.52e-12 | 69.7 |
| MS.gene32187.t1 | MTR_0931s0010 | 29.176 | 425 | 262 | 12 | 122 | 543 | 254 | 642 | 7.67e-38 | 149 |
| MS.gene32187.t1 | MTR_8g094730 | 24.086 | 465 | 280 | 16 | 105 | 532 | 84 | 512 | 1.96e-13 | 73.2 |
| MS.gene32187.t1 | MTR_8g094730 | 24.086 | 465 | 280 | 16 | 105 | 532 | 84 | 512 | 1.99e-13 | 73.2 |
| MS.gene32187.t1 | MTR_8g094730 | 24.576 | 354 | 226 | 11 | 198 | 532 | 64 | 395 | 7.53e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32187.t1 | AT1G07180 | 69.979 | 483 | 143 | 1 | 61 | 543 | 30 | 510 | 0.0 | 691 |
| MS.gene32187.t1 | AT2G29990 | 72.848 | 453 | 123 | 0 | 91 | 543 | 56 | 508 | 0.0 | 688 |
| MS.gene32187.t1 | AT4G21490 | 35.765 | 425 | 226 | 11 | 46 | 455 | 3 | 395 | 3.84e-66 | 225 |
| MS.gene32187.t1 | AT4G21490 | 32.231 | 121 | 73 | 3 | 427 | 543 | 465 | 580 | 1.29e-11 | 67.8 |
| MS.gene32187.t1 | AT4G21490 | 35.765 | 425 | 225 | 11 | 46 | 455 | 3 | 394 | 6.80e-66 | 224 |
| MS.gene32187.t1 | AT4G21490 | 32.231 | 121 | 73 | 3 | 427 | 543 | 464 | 579 | 1.27e-11 | 67.8 |
| MS.gene32187.t1 | AT4G28220 | 38.576 | 337 | 188 | 9 | 109 | 434 | 52 | 380 | 1.25e-65 | 222 |
| MS.gene32187.t1 | AT4G28220 | 38.576 | 337 | 188 | 9 | 109 | 434 | 52 | 380 | 3.12e-65 | 222 |
| MS.gene32187.t1 | AT4G28220 | 36.667 | 120 | 67 | 3 | 428 | 543 | 457 | 571 | 2.86e-13 | 72.8 |
| MS.gene32187.t1 | AT4G05020 | 41.745 | 321 | 175 | 7 | 105 | 417 | 57 | 373 | 1.42e-63 | 218 |
| MS.gene32187.t1 | AT4G05020 | 32.500 | 120 | 72 | 3 | 428 | 543 | 468 | 582 | 3.09e-11 | 66.6 |
| MS.gene32187.t1 | AT4G05020 | 41.745 | 321 | 175 | 7 | 105 | 417 | 57 | 373 | 3.05e-63 | 218 |
| MS.gene32187.t1 | AT2G20800 | 36.193 | 373 | 200 | 8 | 103 | 461 | 60 | 408 | 8.73e-57 | 200 |
| MS.gene32187.t1 | AT2G20800 | 37.500 | 120 | 66 | 3 | 428 | 543 | 468 | 582 | 1.49e-14 | 77.0 |
| MS.gene32187.t1 | AT5G08740 | 24.861 | 539 | 302 | 22 | 33 | 530 | 20 | 496 | 1.57e-19 | 92.4 |
Find 134 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAGAGTTGTTCAACAAAAT+TGG | 0.171502 | 4.4:+22924002 | MS.gene32187:CDS |
| GTTGTTCTGTTCCTTAATTC+TGG | 0.179951 | 4.4:-22921975 | None:intergenic |
| TCTATAACTCTTTGTGTGTT+AGG | 0.192700 | 4.4:-22922046 | None:intergenic |
| GCTGCTTGTCGGTTTCTTAA+AGG | 0.225722 | 4.4:+22922172 | MS.gene32187:CDS |
| CATCACTCAAAACTATCTTT+TGG | 0.254195 | 4.4:-22923343 | None:intergenic |
| CCCTTGATACCGAAAGTTAA+AGG | 0.261179 | 4.4:-22922649 | None:intergenic |
| TAGATCAACAAGTGCCTTAT+AGG | 0.262816 | 4.4:-22924120 | None:intergenic |
| AGAAGATCAGGTGTTGCTTT+TGG | 0.283784 | 4.4:+22921857 | MS.gene32187:CDS |
| TTTCAGAAAGCATCAGATTA+AGG | 0.287447 | 4.4:-22922738 | None:intergenic |
| GTGTTGGTACCCTTGAATTC+AGG | 0.309821 | 4.4:+22922275 | MS.gene32187:CDS |
| TTCCTTATGGTCTCTTGGTT+TGG | 0.321151 | 4.4:+22923375 | MS.gene32187:CDS |
| GGTCTCTTGGTTTGGTCCAC+AGG | 0.327590 | 4.4:+22923383 | MS.gene32187:CDS |
| TTCGTATATTTCCAGAATTA+AGG | 0.335626 | 4.4:+22921964 | MS.gene32187:CDS |
| CTGCTTGTCGGTTTCTTAAA+GGG | 0.336052 | 4.4:+22922173 | MS.gene32187:CDS |
| TGTATCATGCTCAAGAAATA+AGG | 0.343406 | 4.4:+22922704 | MS.gene32187:CDS |
| GCAAAGGGATTGTCACTTGC+TGG | 0.349729 | 4.4:+22924298 | MS.gene32187:CDS |
| TAGAGTTGTTCAACAAAATT+GGG | 0.356038 | 4.4:+22924003 | MS.gene32187:CDS |
| ACAATTTGTGTATAAACATA+TGG | 0.358161 | 4.4:+22924076 | MS.gene32187:CDS |
| CTGCTGCATTGTGTAGTTAT+TGG | 0.365839 | 4.4:+22922915 | MS.gene32187:CDS |
| CTATAACTCTTTGTGTGTTA+GGG | 0.367616 | 4.4:-22922045 | None:intergenic |
| TGTCATATGCAACTTTGAAT+TGG | 0.368204 | 4.4:-22922600 | None:intergenic |
| GGCATCAGTAGGTGCCTATA+AGG | 0.371076 | 4.4:+22924106 | MS.gene32187:CDS |
| GGAGCTGAGCCTTTAACTTT+CGG | 0.375344 | 4.4:+22922640 | MS.gene32187:CDS |
| ATTCTGGAAATATACGAAAA+TGG | 0.382739 | 4.4:-22921959 | None:intergenic |
| TTCTTTCTAGCTTCCTGCAC+TGG | 0.393614 | 4.4:+22922358 | MS.gene32187:CDS |
| TGAAGTTCCTTATGGTCTCT+TGG | 0.393992 | 4.4:+22923370 | MS.gene32187:CDS |
| GCCTTTAACTTTCGGTATCA+AGG | 0.394031 | 4.4:+22922648 | MS.gene32187:CDS |
| ATCTTACACGTGTGCTGAGC+TGG | 0.396198 | 4.4:+22924353 | MS.gene32187:CDS |
| GTCTGGAGTTTGTCTTATGC+GGG | 0.399394 | 4.4:+22923298 | MS.gene32187:intron |
| ATGGGAAGGTAAGGAGCCTT+TGG | 0.400415 | 4.4:-22921927 | None:intergenic |
| GTGTGCTGAGCTGGAGGAAT+AGG | 0.406321 | 4.4:+22924362 | MS.gene32187:CDS |
| GTACCGGTTGGGCTGCTTGT+CGG | 0.407943 | 4.4:+22922161 | MS.gene32187:CDS |
| TTTGCACTTGGGGATTGTGC+TGG | 0.420564 | 4.4:+22923605 | MS.gene32187:CDS |
| TTGGTTTGGTCCACAGGAGT+TGG | 0.429676 | 4.4:+22923389 | MS.gene32187:CDS |
| TCCTTACCTTCCCATGTAGA+TGG | 0.433038 | 4.4:+22921935 | MS.gene32187:CDS |
| TGATACAGAATTGGTGTTGA+TGG | 0.434223 | 4.4:+22923551 | MS.gene32187:intron |
| CTGAATCTTCCAAGCTCTCC+AGG | 0.437706 | 4.4:+22923434 | MS.gene32187:CDS |
| GTGGAAGATGTCTTTGCACT+TGG | 0.442231 | 4.4:+22923593 | MS.gene32187:CDS |
| GATGGAACTGAAGTTCCTTA+TGG | 0.446289 | 4.4:+22923362 | MS.gene32187:CDS |
| AACAAAATTGGGAAACAGAA+TGG | 0.446795 | 4.4:+22924014 | MS.gene32187:CDS |
| TACCTTCCACCTGGAGAGCT+TGG | 0.449786 | 4.4:-22923443 | None:intergenic |
| CAGCAACAGACCTGAATTCA+AGG | 0.450864 | 4.4:-22922285 | None:intergenic |
| AGTTCCTGTTATTCCCCTCT+TGG | 0.451235 | 4.4:-22922008 | None:intergenic |
| TCTAGTCCTGCATATCTTGT+CGG | 0.452195 | 4.4:-22922097 | None:intergenic |
| AGAGTGGTTGTTCTCGGTAC+CGG | 0.453887 | 4.4:+22922145 | MS.gene32187:CDS |
| ACGAAAATGGTCCATCTACA+TGG | 0.454099 | 4.4:-22921946 | None:intergenic |
| GGTTGTTCTCGGTACCGGTT+GGG | 0.456139 | 4.4:+22922150 | MS.gene32187:CDS |
| AGCTAGAAAGAAGTATGAGT+TGG | 0.457476 | 4.4:-22922347 | None:intergenic |
| TGGAAGATGTCTTTGCACTT+GGG | 0.463774 | 4.4:+22923594 | MS.gene32187:CDS |
| GTTATTGGAGGTGGTCCTAC+AGG | 0.464952 | 4.4:+22922930 | MS.gene32187:CDS |
| TGAGCTAAAGCTGGAAGCAC+TGG | 0.467552 | 4.4:-22923650 | None:intergenic |
| CATATCACCAAGGAATCATA+TGG | 0.470079 | 4.4:+22922225 | MS.gene32187:CDS |
| AAACCGACAAGCAGCCCAAC+CGG | 0.471084 | 4.4:-22922164 | None:intergenic |
| AGAAGCAACCTGAGAAGATC+AGG | 0.472613 | 4.4:+22921845 | MS.gene32187:CDS |
| GCATCCTGTATTCTACCAAC+AGG | 0.478437 | 4.4:-22922310 | None:intergenic |
| GTGAAAACCATATGATTCCT+TGG | 0.479965 | 4.4:-22922232 | None:intergenic |
| AGTGCTTCCAGCTTTAGCTC+AGG | 0.480412 | 4.4:+22923652 | MS.gene32187:CDS |
| AAGCAACACCTGATCTTCTC+AGG | 0.480533 | 4.4:-22921853 | None:intergenic |
| TCTGCAGATGGCATCACACT+TGG | 0.481006 | 4.4:+22924050 | MS.gene32187:CDS |
| GACAAGCTTGTAATTGCAGC+TGG | 0.484313 | 4.4:+22922619 | MS.gene32187:CDS |
| TAACACACAAAGAGTTATAG+AGG | 0.487725 | 4.4:+22922048 | MS.gene32187:CDS |
| AAGCCTAGAGTGGTTGTTCT+CGG | 0.488864 | 4.4:+22922139 | MS.gene32187:CDS |
| GACCAAACCAAGAGACCATA+AGG | 0.496146 | 4.4:-22923377 | None:intergenic |
| TATGCAACTTTGAATTGGTA+AGG | 0.497896 | 4.4:-22922595 | None:intergenic |
| TGGTTGTTCTCGGTACCGGT+TGG | 0.498770 | 4.4:+22922149 | MS.gene32187:CDS |
| CAATTTGTGTATAAACATAT+GGG | 0.504254 | 4.4:+22924077 | MS.gene32187:CDS |
| GGAAGATGTCTTTGCACTTG+GGG | 0.505360 | 4.4:+22923595 | MS.gene32187:CDS |
| GTTTGTGTCAACTCCAGTGC+AGG | 0.507620 | 4.4:-22922371 | None:intergenic |
| TCTTATGCGGGGTGTGGTGA+AGG | 0.508837 | 4.4:+22923310 | MS.gene32187:CDS |
| CTGCATTGTGTAGTTATTGG+AGG | 0.508933 | 4.4:+22922918 | MS.gene32187:CDS |
| AGGCTAACCTGAGCTAAAGC+TGG | 0.509934 | 4.4:-22923659 | None:intergenic |
| CCTTTAACTTTCGGTATCAA+GGG | 0.512526 | 4.4:+22922649 | MS.gene32187:CDS |
| GCTAGAAAGAAGTATGAGTT+GGG | 0.516821 | 4.4:-22922346 | None:intergenic |
| TTTCGGTATCAAGGGAGTAA+AGG | 0.520623 | 4.4:+22922657 | MS.gene32187:CDS |
| CCTACAGGAGTGGAATTTAG+TGG | 0.520988 | 4.4:+22922945 | MS.gene32187:CDS |
| CTCTTTAGATAATCCACCAT+TGG | 0.522845 | 4.4:-22922572 | None:intergenic |
| TCCATCTACATGGGAAGGTA+AGG | 0.529367 | 4.4:-22921936 | None:intergenic |
| CATTCATGTCACACTCATTG+AGG | 0.529894 | 4.4:+22923028 | MS.gene32187:CDS |
| ATACTTTCATCCTTTGACGT+TGG | 0.533948 | 4.4:+22923153 | MS.gene32187:CDS |
| CATTGTGTAGTTATTGGAGG+TGG | 0.534574 | 4.4:+22922921 | MS.gene32187:CDS |
| AGTCTGGAGTTTGTCTTATG+CGG | 0.535341 | 4.4:+22923297 | MS.gene32187:intron |
| CTGTCGAAGGCCAACGTCAA+AGG | 0.536614 | 4.4:-22923163 | None:intergenic |
| TGGAAGTAATGTACATGAGA+AGG | 0.538179 | 4.4:+22921877 | MS.gene32187:CDS |
| TTTGTGTGTTAGGGAGCTGA+TGG | 0.540218 | 4.4:-22922036 | None:intergenic |
| TCTTTGGCAGAGACAACAGC+AGG | 0.541549 | 4.4:+22924419 | MS.gene32187:CDS |
| ATAAGGCACTTGTTGATCTA+CGG | 0.542831 | 4.4:+22924123 | MS.gene32187:CDS |
| GGCAGAGACAACAGCAGGAT+AGG | 0.543946 | 4.4:+22924424 | MS.gene32187:CDS |
| CCACTAAATTCCACTCCTGT+AGG | 0.546000 | 4.4:-22922945 | None:intergenic |
| GGACTAGAGGCAACAAAACC+AGG | 0.554285 | 4.4:+22922112 | MS.gene32187:CDS |
| GTCTCTGCCAAAGACAAAAG+TGG | 0.556692 | 4.4:-22924410 | None:intergenic |
| GATGATCCGACAAGATATGC+AGG | 0.562686 | 4.4:+22922091 | MS.gene32187:CDS |
| AGGTCTGTTGCTGAGCCTGT+TGG | 0.569427 | 4.4:+22922295 | MS.gene32187:CDS |
| ACAGAATTGGTGTTGATGGA+TGG | 0.570983 | 4.4:+22923555 | MS.gene32187:intron |
| GTACCGAGAACAACCACTCT+AGG | 0.573776 | 4.4:-22922142 | None:intergenic |
| GGAAAGGCTTTGTCTGCAGA+TGG | 0.574116 | 4.4:+22924038 | MS.gene32187:CDS |
| TCTTATGTTATAGGATGCAA+AGG | 0.575813 | 4.4:+22924282 | MS.gene32187:intron |
| AATGGTCCATCTACATGGGA+AGG | 0.577054 | 4.4:-22921941 | None:intergenic |
| TTGTTGGCTTCAACATGTGT+TGG | 0.577991 | 4.4:+22922259 | MS.gene32187:CDS |
| CTGATGCTTTCTGAAAATCC+AGG | 0.580189 | 4.4:+22922745 | MS.gene32187:CDS |
| TGCGAGGCAGTTACCAATGG+TGG | 0.582363 | 4.4:+22922559 | MS.gene32187:CDS |
| GAGAGAACATTTACATCCAA+AGG | 0.583362 | 4.4:+22921911 | MS.gene32187:CDS |
| TGAGCCTGTTGGTAGAATAC+AGG | 0.585959 | 4.4:+22922306 | MS.gene32187:CDS |
| GGCTTCACATACCTTCCACC+TGG | 0.586382 | 4.4:-22923452 | None:intergenic |
| TTCCAAGCTCTCCAGGTGGA+AGG | 0.587295 | 4.4:+22923441 | MS.gene32187:CDS |
| AGTTTGTCTTATGCGGGGTG+TGG | 0.589261 | 4.4:+22923304 | MS.gene32187:CDS |
| TACTGCGAGGCAGTTACCAA+TGG | 0.597374 | 4.4:+22922556 | MS.gene32187:CDS |
| CTTATGTTATAGGATGCAAA+GGG | 0.602916 | 4.4:+22924283 | MS.gene32187:intron |
| TGTTGATCTACGGCAATCCA+AGG | 0.602932 | 4.4:+22924133 | MS.gene32187:CDS |
| TGGGAAACAGAATGGAGGAA+AGG | 0.603382 | 4.4:+22924022 | MS.gene32187:CDS |
| ATGGGGAGCATGGCATCAGT+AGG | 0.604143 | 4.4:+22924095 | MS.gene32187:CDS |
| GTATAAACATATGGGGAGCA+TGG | 0.604718 | 4.4:+22924085 | MS.gene32187:CDS |
| AATACAGGATGCACTAGCAA+AGG | 0.606941 | 4.4:+22922321 | MS.gene32187:CDS |
| ATGGATGCGTGTTCCGTCTG+TGG | 0.610196 | 4.4:+22923574 | MS.gene32187:CDS |
| CTATAACAATGGCATTAGCA+AGG | 0.610697 | 4.4:+22921816 | None:intergenic |
| CTCAGAGGGACCAACTCCTG+TGG | 0.615481 | 4.4:-22923399 | None:intergenic |
| CGAAAATGGTCCATCTACAT+GGG | 0.615536 | 4.4:-22921945 | None:intergenic |
| TATGCGGGGTGTGGTGAAGG+AGG | 0.616063 | 4.4:+22923313 | MS.gene32187:CDS |
| GACAAGATATGCAGGACTAG+AGG | 0.619013 | 4.4:+22922099 | MS.gene32187:CDS |
| TGGAGGTGGTCCTACAGGAG+TGG | 0.621881 | 4.4:+22922935 | MS.gene32187:CDS |
| GCTTCGTTGCATACTGTCGA+AGG | 0.629576 | 4.4:-22923176 | None:intergenic |
| GCAAAGACATCTTCCACAGA+CGG | 0.636642 | 4.4:-22923587 | None:intergenic |
| TTACACGTGTGCTGAGCTGG+AGG | 0.642106 | 4.4:+22924356 | MS.gene32187:CDS |
| TCTGGAGTTTGTCTTATGCG+GGG | 0.644473 | 4.4:+22923299 | MS.gene32187:CDS |
| AGCAACAGACCTGAATTCAA+GGG | 0.646467 | 4.4:-22922284 | None:intergenic |
| ACCAGGTGAAAAGCCTAGAG+TGG | 0.649954 | 4.4:+22922129 | MS.gene32187:CDS |
| TGACAGGTTGCTGAAAGACA+AGG | 0.650294 | 4.4:+22923969 | MS.gene32187:intron |
| ACACATGTTGAAGCCAACAA+AGG | 0.657554 | 4.4:-22922256 | None:intergenic |
| AAAATTGGGAAACAGAATGG+AGG | 0.666719 | 4.4:+22924017 | MS.gene32187:CDS |
| AATTTGTGTATAAACATATG+GGG | 0.676076 | 4.4:+22924078 | MS.gene32187:CDS |
| TGCAACGAAGCACTTAACAA+AGG | 0.676652 | 4.4:+22923188 | MS.gene32187:CDS |
| AATCTTCCAAGCTCTCCAGG+TGG | 0.690106 | 4.4:+22923437 | MS.gene32187:CDS |
| CAGCACACGTGTAAGATATG+CGG | 0.691917 | 4.4:-22924347 | None:intergenic |
| ATGTCAACAGGTCTACTGCG+AGG | 0.733020 | 4.4:+22922543 | MS.gene32187:intron |
| ATGTTGTGTGCATATCACCA+AGG | 0.767641 | 4.4:+22922215 | MS.gene32187:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATTTTAAATTTTAATATC+TGG | - | chr4.4:22923476-22923495 | None:intergenic | 10.0% |
| !!! | ATTTGTTATAATAATTATGC+AGG | + | chr4.4:22922808-22922827 | MS.gene32187:intron | 15.0% |
| !! | AAGACAATATAGATAAATGT+CGG | - | chr4.4:22923754-22923773 | None:intergenic | 20.0% |
| !! | AATGTAAAAAATTCCAATAG+AGG | + | chr4.4:22923781-22923800 | MS.gene32187:intron | 20.0% |
| !! | AATTATGAAAAGTTAAACAG+TGG | - | chr4.4:22923122-22923141 | None:intergenic | 20.0% |
| !! | AATTTGTGTATAAACATATG+GGG | + | chr4.4:22924078-22924097 | MS.gene32187:CDS | 20.0% |
| !! | ACAATTTGTGTATAAACATA+TGG | + | chr4.4:22924076-22924095 | MS.gene32187:CDS | 20.0% |
| !! | ATGTAAAAAATTCCAATAGA+GGG | + | chr4.4:22923782-22923801 | MS.gene32187:intron | 20.0% |
| !! | CAAAATGTATCTTATGTTAT+AGG | + | chr4.4:22924273-22924292 | MS.gene32187:intron | 20.0% |
| !! | CAATTTGTGTATAAACATAT+GGG | + | chr4.4:22924077-22924096 | MS.gene32187:CDS | 20.0% |
| !!! | AAAATGTTTTTCATTATGAC+AGG | + | chr4.4:22922867-22922886 | MS.gene32187:intron | 20.0% |
| !!! | AGTATAGTTTTTCTAAAAGA+AGG | - | chr4.4:22922424-22922443 | None:intergenic | 20.0% |
| !!! | CTGTTTAACTTTTCATAATT+AGG | + | chr4.4:22923122-22923141 | MS.gene32187:intron | 20.0% |
| !!! | GTATAGTTTTTCTAAAAGAA+GGG | - | chr4.4:22922423-22922442 | None:intergenic | 20.0% |
| !!! | TCTATTGGAATTTTTTACAT+TGG | - | chr4.4:22923782-22923801 | None:intergenic | 20.0% |
| ! | ACAAAACATCATAGACAATA+AGG | - | chr4.4:22923682-22923701 | None:intergenic | 25.0% |
| ! | GAAAAACTATACTGTTACAA+TGG | + | chr4.4:22922431-22922450 | MS.gene32187:intron | 25.0% |
| ! | GCTTAAAACTAAACTAAGTA+TGG | - | chr4.4:22922785-22922804 | None:intergenic | 25.0% |
| ! | GTTATAATAATTATGCAGGT+GGG | + | chr4.4:22922812-22922831 | MS.gene32187:intron | 25.0% |
| ! | TAGAGTTGTTCAACAAAATT+GGG | + | chr4.4:22924003-22924022 | MS.gene32187:CDS | 25.0% |
| ! | TGTTATAATAATTATGCAGG+TGG | + | chr4.4:22922811-22922830 | MS.gene32187:intron | 25.0% |
| ! | TTCGTATATTTCCAGAATTA+AGG | + | chr4.4:22921964-22921983 | MS.gene32187:CDS | 25.0% |
| !! | ATCACTCAAAACTATCTTTT+GGG | - | chr4.4:22923345-22923364 | None:intergenic | 25.0% |
| !! | ATTCAATTTTTGTATCAGTC+TGG | + | chr4.4:22923281-22923300 | MS.gene32187:intron | 25.0% |
| !! | ATTCTGGAAATATACGAAAA+TGG | - | chr4.4:22921962-22921981 | None:intergenic | 25.0% |
| !!! | GTCATTATTTTTTTTGCCAA+AGG | + | chr4.4:22922836-22922855 | MS.gene32187:intron | 25.0% |
| AACAAAATTGGGAAACAGAA+TGG | + | chr4.4:22924014-22924033 | MS.gene32187:CDS | 30.0% | |
| ATGCATAGTACTACAGAAAT+AGG | + | chr4.4:22923848-22923867 | MS.gene32187:intron | 30.0% | |
| CTAATGTCTAATTTACACTC+TGG | + | chr4.4:22924190-22924209 | MS.gene32187:intron | 30.0% | |
| CTATAACTCTTTGTGTGTTA+GGG | - | chr4.4:22922048-22922067 | None:intergenic | 30.0% | |
| CTTATGTTATAGGATGCAAA+GGG | + | chr4.4:22924283-22924302 | MS.gene32187:intron | 30.0% | |
| GACATGTAATCATTGAAGAT+TGG | - | chr4.4:22923244-22923263 | None:intergenic | 30.0% | |
| GTAGAGTTGTTCAACAAAAT+TGG | + | chr4.4:22924002-22924021 | MS.gene32187:CDS | 30.0% | |
| GTTGTTGAATGATACAGAAT+TGG | + | chr4.4:22923542-22923561 | MS.gene32187:intron | 30.0% | |
| TAACACACAAAGAGTTATAG+AGG | + | chr4.4:22922048-22922067 | MS.gene32187:CDS | 30.0% | |
| TATGCAACTTTGAATTGGTA+AGG | - | chr4.4:22922598-22922617 | None:intergenic | 30.0% | |
| TCTATAACTCTTTGTGTGTT+AGG | - | chr4.4:22922049-22922068 | None:intergenic | 30.0% | |
| TCTTATGTTATAGGATGCAA+AGG | + | chr4.4:22924282-22924301 | MS.gene32187:intron | 30.0% | |
| TGTATCATGCTCAAGAAATA+AGG | + | chr4.4:22922704-22922723 | MS.gene32187:CDS | 30.0% | |
| TGTCATATGCAACTTTGAAT+TGG | - | chr4.4:22922603-22922622 | None:intergenic | 30.0% | |
| ! | AACATGAAATTTTCCAAGAG+GGG | + | chr4.4:22921995-22922014 | MS.gene32187:CDS | 30.0% |
| ! | ACAACATGAAATTTTCCAAG+AGG | + | chr4.4:22921993-22922012 | MS.gene32187:CDS | 30.0% |
| ! | CAACATGAAATTTTCCAAGA+GGG | + | chr4.4:22921994-22922013 | MS.gene32187:CDS | 30.0% |
| ! | CAATTTTACTTCATGTCAAC+AGG | + | chr4.4:22922531-22922550 | MS.gene32187:intron | 30.0% |
| ! | CATCACTCAAAACTATCTTT+TGG | - | chr4.4:22923346-22923365 | None:intergenic | 30.0% |
| ! | TCACTCAAAACTATCTTTTG+GGG | - | chr4.4:22923344-22923363 | None:intergenic | 30.0% |
| ! | TGATGTTTTGTCAGTACATA+TGG | + | chr4.4:22923691-22923710 | MS.gene32187:intron | 30.0% |
| ! | TTTTGTTGAACAACTCTACA+AGG | - | chr4.4:22924001-22924020 | None:intergenic | 30.0% |
| !! | TTTCAGAAAGCATCAGATTA+AGG | - | chr4.4:22922741-22922760 | None:intergenic | 30.0% |
| !!! | AGTTTTTTGACAAACTCAGA+GGG | - | chr4.4:22923416-22923435 | None:intergenic | 30.0% |
| !!! | CAAAAGATAGTTTTGAGTGA+TGG | + | chr4.4:22923344-22923363 | MS.gene32187:CDS | 30.0% |
| AAAATTGGGAAACAGAATGG+AGG | + | chr4.4:22924017-22924036 | MS.gene32187:CDS | 35.0% | |
| ATACGCGATCTAAACACAAA+AGG | - | chr4.4:22923218-22923237 | None:intergenic | 35.0% | |
| ATACTTTCATCCTTTGACGT+TGG | + | chr4.4:22923153-22923172 | MS.gene32187:CDS | 35.0% | |
| CATATCACCAAGGAATCATA+TGG | + | chr4.4:22922225-22922244 | MS.gene32187:CDS | 35.0% | |
| CTCTTTAGATAATCCACCAT+TGG | - | chr4.4:22922575-22922594 | None:intergenic | 35.0% | |
| GAAACTTTCCCATTATACCT+TGG | - | chr4.4:22924153-22924172 | None:intergenic | 35.0% | |
| GAGAGAACATTTACATCCAA+AGG | + | chr4.4:22921911-22921930 | MS.gene32187:CDS | 35.0% | |
| GTGAAAACCATATGATTCCT+TGG | - | chr4.4:22922235-22922254 | None:intergenic | 35.0% | |
| GTTGTTCTGTTCCTTAATTC+TGG | - | chr4.4:22921978-22921997 | None:intergenic | 35.0% | |
| TAGATCAACAAGTGCCTTAT+AGG | - | chr4.4:22924123-22924142 | None:intergenic | 35.0% | |
| TGGAAGTAATGTACATGAGA+AGG | + | chr4.4:22921877-22921896 | MS.gene32187:CDS | 35.0% | |
| ! | AGCTAGAAAGAAGTATGAGT+TGG | - | chr4.4:22922350-22922369 | None:intergenic | 35.0% |
| ! | ATAAGGCACTTGTTGATCTA+CGG | + | chr4.4:22924123-22924142 | MS.gene32187:CDS | 35.0% |
| ! | CCTTTAACTTTCGGTATCAA+GGG | + | chr4.4:22922649-22922668 | MS.gene32187:CDS | 35.0% |
| ! | GCTAGAAAGAAGTATGAGTT+GGG | - | chr4.4:22922349-22922368 | None:intergenic | 35.0% |
| ! | GTTTTACGTGGCAGTAAATT+GGG | + | chr4.4:22924384-22924403 | MS.gene32187:CDS | 35.0% |
| ! | GTTTTCTTGAACAAACTGGA+AGG | + | chr4.4:22923627-22923646 | MS.gene32187:CDS | 35.0% |
| ! | TATGGTTTTCACTCCTTTGT+TGG | + | chr4.4:22922243-22922262 | MS.gene32187:CDS | 35.0% |
| ! | TTTTACGTGGCAGTAAATTG+GGG | + | chr4.4:22924385-22924404 | MS.gene32187:CDS | 35.0% |
| !! | AACATTTTCAGCTTAGCCTT+TGG | - | chr4.4:22922855-22922874 | None:intergenic | 35.0% |
| !! | ATGTCGGCTTAACTTTGTTT+AGG | - | chr4.4:22923738-22923757 | None:intergenic | 35.0% |
| !! | TGATACAGAATTGGTGTTGA+TGG | + | chr4.4:22923551-22923570 | MS.gene32187:intron | 35.0% |
| !!! | CAGTTTTTTGACAAACTCAG+AGG | - | chr4.4:22923417-22923436 | None:intergenic | 35.0% |
| AATACAGGATGCACTAGCAA+AGG | + | chr4.4:22922321-22922340 | MS.gene32187:CDS | 40.0% | |
| ACACATGTTGAAGCCAACAA+AGG | - | chr4.4:22922259-22922278 | None:intergenic | 40.0% | |
| ACGAAAATGGTCCATCTACA+TGG | - | chr4.4:22921949-22921968 | None:intergenic | 40.0% | |
| ACGGCAATCCAAGGTATAAT+GGG | + | chr4.4:22924142-22924161 | MS.gene32187:intron | 40.0% | |
| AGCAACAGACCTGAATTCAA+GGG | - | chr4.4:22922287-22922306 | None:intergenic | 40.0% | |
| ATGTTGTGTGCATATCACCA+AGG | + | chr4.4:22922215-22922234 | MS.gene32187:CDS | 40.0% | |
| CATTCATGTCACACTCATTG+AGG | + | chr4.4:22923028-22923047 | MS.gene32187:CDS | 40.0% | |
| CATTGTGTAGTTATTGGAGG+TGG | + | chr4.4:22922921-22922940 | MS.gene32187:CDS | 40.0% | |
| CCCTTGATACCGAAAGTTAA+AGG | - | chr4.4:22922652-22922671 | None:intergenic | 40.0% | |
| CGAAAATGGTCCATCTACAT+GGG | - | chr4.4:22921948-22921967 | None:intergenic | 40.0% | |
| CTGCATTGTGTAGTTATTGG+AGG | + | chr4.4:22922918-22922937 | MS.gene32187:CDS | 40.0% | |
| CTGCTGCATTGTGTAGTTAT+TGG | + | chr4.4:22922915-22922934 | MS.gene32187:CDS | 40.0% | |
| GAGTATACTTTCCTATGCAC+TGG | + | chr4.4:22923942-22923961 | MS.gene32187:intron | 40.0% | |
| GATGGAACTGAAGTTCCTTA+TGG | + | chr4.4:22923362-22923381 | MS.gene32187:CDS | 40.0% | |
| GTATAAACATATGGGGAGCA+TGG | + | chr4.4:22924085-22924104 | MS.gene32187:CDS | 40.0% | |
| TACGGCAATCCAAGGTATAA+TGG | + | chr4.4:22924141-22924160 | MS.gene32187:intron | 40.0% | |
| TCTAGTCCTGCATATCTTGT+CGG | - | chr4.4:22922100-22922119 | None:intergenic | 40.0% | |
| TGAAGTTCCTTATGGTCTCT+TGG | + | chr4.4:22923370-22923389 | MS.gene32187:CDS | 40.0% | |
| TGGAAGATGTCTTTGCACTT+GGG | + | chr4.4:22923594-22923613 | MS.gene32187:CDS | 40.0% | |
| TTCCTTATGGTCTCTTGGTT+TGG | + | chr4.4:22923375-22923394 | MS.gene32187:CDS | 40.0% | |
| TTTCGGTATCAAGGGAGTAA+AGG | + | chr4.4:22922657-22922676 | MS.gene32187:CDS | 40.0% | |
| ! | AGTCTGGAGTTTGTCTTATG+CGG | + | chr4.4:22923297-22923316 | MS.gene32187:intron | 40.0% |
| ! | ATGCTTTCTGAAAATCCAGG+TGG | + | chr4.4:22922748-22922767 | MS.gene32187:intron | 40.0% |
| ! | CTGATGCTTTCTGAAAATCC+AGG | + | chr4.4:22922745-22922764 | MS.gene32187:CDS | 40.0% |
| ! | GCCTTTAACTTTCGGTATCA+AGG | + | chr4.4:22922648-22922667 | MS.gene32187:CDS | 40.0% |
| ! | GGTTTTACGTGGCAGTAAAT+TGG | + | chr4.4:22924383-22924402 | MS.gene32187:CDS | 40.0% |
| ! | TGCAACGAAGCACTTAACAA+AGG | + | chr4.4:22923188-22923207 | MS.gene32187:CDS | 40.0% |
| ! | TGCTTTCTGAAAATCCAGGT+GGG | + | chr4.4:22922749-22922768 | MS.gene32187:intron | 40.0% |
| ! | TTTTCCAAGAGGGGAATAAC+AGG | + | chr4.4:22922004-22922023 | MS.gene32187:CDS | 40.0% |
| !! | ACAGAATTGGTGTTGATGGA+TGG | + | chr4.4:22923555-22923574 | MS.gene32187:intron | 40.0% |
| !! | CTGCTTGTCGGTTTCTTAAA+GGG | + | chr4.4:22922173-22922192 | MS.gene32187:CDS | 40.0% |
| !! | TTGTTGGCTTCAACATGTGT+TGG | + | chr4.4:22922259-22922278 | MS.gene32187:CDS | 40.0% |
| !!! | AGAAGATCAGGTGTTGCTTT+TGG | + | chr4.4:22921857-22921876 | MS.gene32187:CDS | 40.0% |
| !!! | GCTGGTTTTCTTGAACAAAC+TGG | + | chr4.4:22923623-22923642 | MS.gene32187:CDS | 40.0% |
| AAGCAACACCTGATCTTCTC+AGG | - | chr4.4:22921856-22921875 | None:intergenic | 45.0% | |
| AAGCCTAGAGTGGTTGTTCT+CGG | + | chr4.4:22922139-22922158 | MS.gene32187:CDS | 45.0% | |
| AATGGTCCATCTACATGGGA+AGG | - | chr4.4:22921944-22921963 | None:intergenic | 45.0% | |
| AGAAGCAACCTGAGAAGATC+AGG | + | chr4.4:22921845-22921864 | MS.gene32187:CDS | 45.0% | |
| AGTTCCTGTTATTCCCCTCT+TGG | - | chr4.4:22922011-22922030 | None:intergenic | 45.0% | |
| ATGGATATGAAACACCCACC+TGG | - | chr4.4:22922766-22922785 | None:intergenic | 45.0% | |
| CAGCAACAGACCTGAATTCA+AGG | - | chr4.4:22922288-22922307 | None:intergenic | 45.0% | |
| CAGCACACGTGTAAGATATG+CGG | - | chr4.4:22924350-22924369 | None:intergenic | 45.0% | |
| CCACTAAATTCCACTCCTGT+AGG | - | chr4.4:22922948-22922967 | None:intergenic | 45.0% | |
| CCTACAGGAGTGGAATTTAG+TGG | + | chr4.4:22922945-22922964 | MS.gene32187:CDS | 45.0% | |
| GACAAGATATGCAGGACTAG+AGG | + | chr4.4:22922099-22922118 | MS.gene32187:CDS | 45.0% | |
| GACAAGCTTGTAATTGCAGC+TGG | + | chr4.4:22922619-22922638 | MS.gene32187:CDS | 45.0% | |
| GACCAAACCAAGAGACCATA+AGG | - | chr4.4:22923380-22923399 | None:intergenic | 45.0% | |
| GATGATCCGACAAGATATGC+AGG | + | chr4.4:22922091-22922110 | MS.gene32187:CDS | 45.0% | |
| GCAAAGACATCTTCCACAGA+CGG | - | chr4.4:22923590-22923609 | None:intergenic | 45.0% | |
| GCATCCTGTATTCTACCAAC+AGG | - | chr4.4:22922313-22922332 | None:intergenic | 45.0% | |
| GGAAGATGTCTTTGCACTTG+GGG | + | chr4.4:22923595-22923614 | MS.gene32187:CDS | 45.0% | |
| GTCTCTGCCAAAGACAAAAG+TGG | - | chr4.4:22924413-22924432 | None:intergenic | 45.0% | |
| GTGGAAGATGTCTTTGCACT+TGG | + | chr4.4:22923593-22923612 | MS.gene32187:CDS | 45.0% | |
| TCCATCTACATGGGAAGGTA+AGG | - | chr4.4:22921939-22921958 | None:intergenic | 45.0% | |
| TCCTTACCTTCCCATGTAGA+TGG | + | chr4.4:22921935-22921954 | MS.gene32187:CDS | 45.0% | |
| TGACAGGTTGCTGAAAGACA+AGG | + | chr4.4:22923969-22923988 | MS.gene32187:intron | 45.0% | |
| TGGGAAACAGAATGGAGGAA+AGG | + | chr4.4:22924022-22924041 | MS.gene32187:CDS | 45.0% | |
| TGTTGATCTACGGCAATCCA+AGG | + | chr4.4:22924133-22924152 | MS.gene32187:CDS | 45.0% | |
| TTTGTGTGTTAGGGAGCTGA+TGG | - | chr4.4:22922039-22922058 | None:intergenic | 45.0% | |
| ! | CTGGAGGAATAGGTTTTACG+TGG | + | chr4.4:22924372-22924391 | MS.gene32187:CDS | 45.0% |
| ! | GGAGCTGAGCCTTTAACTTT+CGG | + | chr4.4:22922640-22922659 | MS.gene32187:CDS | 45.0% |
| ! | GTCTGGAGTTTGTCTTATGC+GGG | + | chr4.4:22923298-22923317 | MS.gene32187:intron | 45.0% |
| ! | GTGTTGGTACCCTTGAATTC+AGG | + | chr4.4:22922275-22922294 | MS.gene32187:CDS | 45.0% |
| ! | GTTTTGTCAGCTGGCTGATA+TGG | + | chr4.4:22924320-22924339 | MS.gene32187:CDS | 45.0% |
| ! | TCTGGAGTTTGTCTTATGCG+GGG | + | chr4.4:22923299-22923318 | MS.gene32187:CDS | 45.0% |
| ! | TGAGCCTGTTGGTAGAATAC+AGG | + | chr4.4:22922306-22922325 | MS.gene32187:CDS | 45.0% |
| !! | GCTGCTTGTCGGTTTCTTAA+AGG | + | chr4.4:22922172-22922191 | MS.gene32187:CDS | 45.0% |
| !! | TCCAATAGAGGGTACTTGAC+AGG | + | chr4.4:22923793-22923812 | MS.gene32187:intron | 45.0% |
| !! | TGGGGAACCACTTTTGTCTT+TGG | + | chr4.4:22924403-22924422 | MS.gene32187:CDS | 45.0% |
| !! | TTCTTTCTAGCTTCCTGCAC+TGG | + | chr4.4:22922358-22922377 | MS.gene32187:CDS | 45.0% |
| AATCTTCCAAGCTCTCCAGG+TGG | + | chr4.4:22923437-22923456 | MS.gene32187:CDS | 50.0% | |
| ACCAGGTGAAAAGCCTAGAG+TGG | + | chr4.4:22922129-22922148 | MS.gene32187:CDS | 50.0% | |
| AGAGTGGTTGTTCTCGGTAC+CGG | + | chr4.4:22922145-22922164 | MS.gene32187:CDS | 50.0% | |
| AGGCTAACCTGAGCTAAAGC+TGG | - | chr4.4:22923662-22923681 | None:intergenic | 50.0% | |
| AGTTTGTCTTATGCGGGGTG+TGG | + | chr4.4:22923304-22923323 | MS.gene32187:CDS | 50.0% | |
| ATCTTACACGTGTGCTGAGC+TGG | + | chr4.4:22924353-22924372 | MS.gene32187:CDS | 50.0% | |
| ATGGGAAGGTAAGGAGCCTT+TGG | - | chr4.4:22921930-22921949 | None:intergenic | 50.0% | |
| ATGTCAACAGGTCTACTGCG+AGG | + | chr4.4:22922543-22922562 | MS.gene32187:intron | 50.0% | |
| CTGAATCTTCCAAGCTCTCC+AGG | + | chr4.4:22923434-22923453 | MS.gene32187:CDS | 50.0% | |
| GCCTGTCAAGTACCCTCTAT+TGG | - | chr4.4:22923797-22923816 | None:intergenic | 50.0% | |
| GCTTCGTTGCATACTGTCGA+AGG | - | chr4.4:22923179-22923198 | None:intergenic | 50.0% | |
| GGACTAGAGGCAACAAAACC+AGG | + | chr4.4:22922112-22922131 | MS.gene32187:CDS | 50.0% | |
| GGCATCAGTAGGTGCCTATA+AGG | + | chr4.4:22924106-22924125 | MS.gene32187:CDS | 50.0% | |
| GTACCGAGAACAACCACTCT+AGG | - | chr4.4:22922145-22922164 | None:intergenic | 50.0% | |
| GTTATTGGAGGTGGTCCTAC+AGG | + | chr4.4:22922930-22922949 | MS.gene32187:CDS | 50.0% | |
| GTTTGTGTCAACTCCAGTGC+AGG | - | chr4.4:22922374-22922393 | None:intergenic | 50.0% | |
| TACTGCGAGGCAGTTACCAA+TGG | + | chr4.4:22922556-22922575 | MS.gene32187:CDS | 50.0% | |
| TCTGCAGATGGCATCACACT+TGG | + | chr4.4:22924050-22924069 | MS.gene32187:CDS | 50.0% | |
| TCTTTGGCAGAGACAACAGC+AGG | + | chr4.4:22924419-22924438 | MS.gene32187:CDS | 50.0% | |
| TTTGCACTTGGGGATTGTGC+TGG | + | chr4.4:22923605-22923624 | MS.gene32187:CDS | 50.0% | |
| ! | ACCACTCTAGGCTTTTCACC+TGG | - | chr4.4:22922133-22922152 | None:intergenic | 50.0% |
| ! | AGTGCTTCCAGCTTTAGCTC+AGG | + | chr4.4:22923652-22923671 | MS.gene32187:CDS | 50.0% |
| ! | GCAAAGGGATTGTCACTTGC+TGG | + | chr4.4:22924298-22924317 | MS.gene32187:CDS | 50.0% |
| ! | GGAAAGGCTTTGTCTGCAGA+TGG | + | chr4.4:22924038-22924057 | MS.gene32187:CDS | 50.0% |
| ! | TGAGCTAAAGCTGGAAGCAC+TGG | - | chr4.4:22923653-22923672 | None:intergenic | 50.0% |
| !! | TTGGTTTGGTCCACAGGAGT+TGG | + | chr4.4:22923389-22923408 | MS.gene32187:CDS | 50.0% |
| !!! | CACTTGCTGGTTTTGTCAGC+TGG | + | chr4.4:22924311-22924330 | MS.gene32187:CDS | 50.0% |
| AAACCGACAAGCAGCCCAAC+CGG | - | chr4.4:22922167-22922186 | None:intergenic | 55.0% | |
| AGGTCTGTTGCTGAGCCTGT+TGG | + | chr4.4:22922295-22922314 | MS.gene32187:CDS | 55.0% | |
| ATGGATGCGTGTTCCGTCTG+TGG | + | chr4.4:22923574-22923593 | MS.gene32187:CDS | 55.0% | |
| CCTGTCAGTGACCAGTGCAT+AGG | - | chr4.4:22923956-22923975 | None:intergenic | 55.0% | |
| CTGTCGAAGGCCAACGTCAA+AGG | - | chr4.4:22923166-22923185 | None:intergenic | 55.0% | |
| GGCAGAGACAACAGCAGGAT+AGG | + | chr4.4:22924424-22924443 | MS.gene32187:CDS | 55.0% | |
| GGCTTCACATACCTTCCACC+TGG | - | chr4.4:22923455-22923474 | None:intergenic | 55.0% | |
| GTGTGCTGAGCTGGAGGAAT+AGG | + | chr4.4:22924362-22924381 | MS.gene32187:CDS | 55.0% | |
| TACCTTCCACCTGGAGAGCT+TGG | - | chr4.4:22923446-22923465 | None:intergenic | 55.0% | |
| TCTTATGCGGGGTGTGGTGA+AGG | + | chr4.4:22923310-22923329 | MS.gene32187:CDS | 55.0% | |
| TGCGAGGCAGTTACCAATGG+TGG | + | chr4.4:22922559-22922578 | MS.gene32187:CDS | 55.0% | |
| TTACACGTGTGCTGAGCTGG+AGG | + | chr4.4:22924356-22924375 | MS.gene32187:CDS | 55.0% | |
| TTCCAAGCTCTCCAGGTGGA+AGG | + | chr4.4:22923441-22923460 | MS.gene32187:CDS | 55.0% | |
| ! | ATGGGGAGCATGGCATCAGT+AGG | + | chr4.4:22924095-22924114 | MS.gene32187:CDS | 55.0% |
| ! | CCTATGCACTGGTCACTGAC+AGG | + | chr4.4:22923953-22923972 | MS.gene32187:intron | 55.0% |
| !! | GGTCTCTTGGTTTGGTCCAC+AGG | + | chr4.4:22923383-22923402 | MS.gene32187:CDS | 55.0% |
| !! | GGTTGTTCTCGGTACCGGTT+GGG | + | chr4.4:22922150-22922169 | MS.gene32187:CDS | 55.0% |
| !! | TGGTTGTTCTCGGTACCGGT+TGG | + | chr4.4:22922149-22922168 | MS.gene32187:CDS | 55.0% |
| CTCAGAGGGACCAACTCCTG+TGG | - | chr4.4:22923402-22923421 | None:intergenic | 60.0% | |
| TATGCGGGGTGTGGTGAAGG+AGG | + | chr4.4:22923313-22923332 | MS.gene32187:CDS | 60.0% | |
| TGGAGGTGGTCCTACAGGAG+TGG | + | chr4.4:22922935-22922954 | MS.gene32187:CDS | 60.0% | |
| !! | GTACCGGTTGGGCTGCTTGT+CGG | + | chr4.4:22922161-22922180 | MS.gene32187:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 22921824 | 22924450 | 22921824 | ID=MS.gene32187 |
| chr4.4 | mRNA | 22921824 | 22924450 | 22921824 | ID=MS.gene32187.t1;Parent=MS.gene32187 |
| chr4.4 | exon | 22921824 | 22922402 | 22921824 | ID=MS.gene32187.t1.exon1;Parent=MS.gene32187.t1 |
| chr4.4 | CDS | 22921824 | 22922402 | 22921824 | ID=cds.MS.gene32187.t1;Parent=MS.gene32187.t1 |
| chr4.4 | exon | 22922553 | 22922766 | 22922553 | ID=MS.gene32187.t1.exon2;Parent=MS.gene32187.t1 |
| chr4.4 | CDS | 22922553 | 22922766 | 22922553 | ID=cds.MS.gene32187.t1;Parent=MS.gene32187.t1 |
| chr4.4 | exon | 22922889 | 22923049 | 22922889 | ID=MS.gene32187.t1.exon3;Parent=MS.gene32187.t1 |
| chr4.4 | CDS | 22922889 | 22923049 | 22922889 | ID=cds.MS.gene32187.t1;Parent=MS.gene32187.t1 |
| chr4.4 | exon | 22923144 | 22923209 | 22923144 | ID=MS.gene32187.t1.exon4;Parent=MS.gene32187.t1 |
| chr4.4 | CDS | 22923144 | 22923209 | 22923144 | ID=cds.MS.gene32187.t1;Parent=MS.gene32187.t1 |
| chr4.4 | exon | 22923299 | 22923462 | 22923299 | ID=MS.gene32187.t1.exon5;Parent=MS.gene32187.t1 |
| chr4.4 | CDS | 22923299 | 22923462 | 22923299 | ID=cds.MS.gene32187.t1;Parent=MS.gene32187.t1 |
| chr4.4 | exon | 22923559 | 22923673 | 22923559 | ID=MS.gene32187.t1.exon6;Parent=MS.gene32187.t1 |
| chr4.4 | CDS | 22923559 | 22923673 | 22923559 | ID=cds.MS.gene32187.t1;Parent=MS.gene32187.t1 |
| chr4.4 | exon | 22923975 | 22924154 | 22923975 | ID=MS.gene32187.t1.exon7;Parent=MS.gene32187.t1 |
| chr4.4 | CDS | 22923975 | 22924154 | 22923975 | ID=cds.MS.gene32187.t1;Parent=MS.gene32187.t1 |
| chr4.4 | exon | 22924295 | 22924450 | 22924295 | ID=MS.gene32187.t1.exon8;Parent=MS.gene32187.t1 |
| chr4.4 | CDS | 22924295 | 22924450 | 22924295 | ID=cds.MS.gene32187.t1;Parent=MS.gene32187.t1 |
| Gene Sequence |
| Protein sequence |
