Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052537.t1 | XP_003608194.2 | 98.2 | 544 | 10 | 0 | 1 | 544 | 1 | 544 | 0.00E+00 | 1087.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052537.t1 | Q8GWA1 | 67.3 | 510 | 155 | 2 | 34 | 543 | 13 | 510 | 7.0e-202 | 704.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052537.t1 | G7JQS9 | 98.2 | 544 | 10 | 0 | 1 | 544 | 1 | 544 | 0.0e+00 | 1087.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049413 | MS.gene052537 | 0.808027 | 3.79E-50 | -1.69E-46 |
| MS.gene052537 | MS.gene061729 | 0.801936 | 7.12E-49 | -1.69E-46 |
| MS.gene052537 | MS.gene071702 | 0.874138 | 8.53E-68 | -1.69E-46 |
| MS.gene052537 | MS.gene071703 | 0.917975 | 2.76E-86 | -1.69E-46 |
| MS.gene052537 | MS.gene32187 | 0.906729 | 1.09E-80 | -1.69E-46 |
| MS.gene052537 | MS.gene33741 | 0.937493 | 3.17E-98 | -1.69E-46 |
| MS.gene052537 | MS.gene33742 | 0.922116 | 1.49E-88 | -1.69E-46 |
| MS.gene052537 | MS.gene39401 | 0.907532 | 4.58E-81 | -1.69E-46 |
| MS.gene052537 | MS.gene43937 | 0.806195 | 9.25E-50 | -1.69E-46 |
| MS.gene052537 | MS.gene45115 | 0.801282 | 9.69E-49 | -1.69E-46 |
| MS.gene052537 | MS.gene54123 | 0.811394 | 7.16E-51 | -1.69E-46 |
| MS.gene052537 | MS.gene68141 | 0.80274 | 4.86E-49 | -1.69E-46 |
| MS.gene052537 | MS.gene73644 | 0.802221 | 6.22E-49 | -1.69E-46 |
| MS.gene052537 | MS.gene90922 | 0.805951 | 1.04E-49 | -1.69E-46 |
| MS.gene052537 | MS.gene92076 | 0.812869 | 3.41E-51 | -1.69E-46 |
| MS.gene052537 | MS.gene98636 | 0.808566 | 2.91E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052537.t1 | MTR_4g090580 | 98.162 | 544 | 10 | 0 | 1 | 544 | 1 | 544 | 0.0 | 1107 |
| MS.gene052537.t1 | MTR_5g071250 | 75.664 | 452 | 110 | 0 | 92 | 543 | 50 | 501 | 0.0 | 721 |
| MS.gene052537.t1 | MTR_3g464380 | 68.548 | 496 | 150 | 3 | 54 | 543 | 9 | 504 | 0.0 | 684 |
| MS.gene052537.t1 | MTR_5g071250 | 75.000 | 344 | 86 | 0 | 92 | 435 | 50 | 393 | 0.0 | 540 |
| MS.gene052537.t1 | MTR_4g091240 | 38.753 | 369 | 204 | 10 | 96 | 449 | 43 | 404 | 2.00e-72 | 241 |
| MS.gene052537.t1 | MTR_4g091240 | 34.167 | 120 | 70 | 3 | 428 | 543 | 464 | 578 | 3.58e-12 | 69.3 |
| MS.gene052537.t1 | MTR_2g011730 | 39.595 | 346 | 193 | 8 | 105 | 440 | 51 | 390 | 1.21e-71 | 239 |
| MS.gene052537.t1 | MTR_2g011730 | 36.667 | 120 | 67 | 3 | 428 | 543 | 464 | 578 | 3.01e-14 | 75.9 |
| MS.gene052537.t1 | MTR_4g045997 | 36.719 | 384 | 214 | 10 | 81 | 449 | 37 | 406 | 2.85e-67 | 227 |
| MS.gene052537.t1 | MTR_4g045997 | 36.579 | 380 | 220 | 9 | 81 | 449 | 37 | 406 | 4.69e-67 | 227 |
| MS.gene052537.t1 | MTR_4g045997 | 36.667 | 120 | 67 | 3 | 428 | 543 | 463 | 577 | 2.93e-15 | 79.0 |
| MS.gene052537.t1 | MTR_4g045993 | 35.150 | 367 | 200 | 10 | 105 | 455 | 44 | 388 | 2.63e-64 | 220 |
| MS.gene052537.t1 | MTR_4g045993 | 35.000 | 120 | 69 | 3 | 428 | 543 | 455 | 569 | 1.01e-12 | 71.2 |
| MS.gene052537.t1 | MTR_4g091240 | 35.644 | 303 | 176 | 8 | 162 | 449 | 2 | 300 | 1.57e-51 | 183 |
| MS.gene052537.t1 | MTR_4g091240 | 34.167 | 120 | 70 | 3 | 428 | 543 | 360 | 474 | 2.57e-12 | 69.7 |
| MS.gene052537.t1 | MTR_0931s0010 | 29.176 | 425 | 262 | 12 | 122 | 543 | 254 | 642 | 6.68e-38 | 149 |
| MS.gene052537.t1 | MTR_8g094730 | 24.086 | 465 | 280 | 16 | 105 | 532 | 84 | 512 | 2.14e-13 | 73.2 |
| MS.gene052537.t1 | MTR_8g094730 | 24.086 | 465 | 280 | 16 | 105 | 532 | 84 | 512 | 2.27e-13 | 73.2 |
| MS.gene052537.t1 | MTR_8g094730 | 24.576 | 354 | 226 | 11 | 198 | 532 | 64 | 395 | 7.67e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene052537.t1 | AT1G07180 | 69.772 | 483 | 144 | 1 | 61 | 543 | 30 | 510 | 0.0 | 689 |
| MS.gene052537.t1 | AT2G29990 | 72.627 | 453 | 124 | 0 | 91 | 543 | 56 | 508 | 0.0 | 686 |
| MS.gene052537.t1 | AT4G21490 | 35.765 | 425 | 226 | 11 | 46 | 455 | 3 | 395 | 4.49e-66 | 225 |
| MS.gene052537.t1 | AT4G21490 | 32.231 | 121 | 73 | 3 | 427 | 543 | 465 | 580 | 1.36e-11 | 67.4 |
| MS.gene052537.t1 | AT4G21490 | 35.765 | 425 | 225 | 11 | 46 | 455 | 3 | 394 | 6.59e-66 | 224 |
| MS.gene052537.t1 | AT4G21490 | 32.231 | 121 | 73 | 3 | 427 | 543 | 464 | 579 | 1.30e-11 | 67.8 |
| MS.gene052537.t1 | AT4G28220 | 38.576 | 337 | 188 | 9 | 109 | 434 | 52 | 380 | 1.39e-65 | 221 |
| MS.gene052537.t1 | AT4G28220 | 38.576 | 337 | 188 | 9 | 109 | 434 | 52 | 380 | 2.73e-65 | 223 |
| MS.gene052537.t1 | AT4G28220 | 36.667 | 120 | 67 | 3 | 428 | 543 | 457 | 571 | 2.86e-13 | 72.8 |
| MS.gene052537.t1 | AT4G05020 | 41.745 | 321 | 175 | 7 | 105 | 417 | 57 | 373 | 1.36e-63 | 218 |
| MS.gene052537.t1 | AT4G05020 | 32.500 | 120 | 72 | 3 | 428 | 543 | 468 | 582 | 3.09e-11 | 66.6 |
| MS.gene052537.t1 | AT4G05020 | 41.745 | 321 | 175 | 7 | 105 | 417 | 57 | 373 | 3.21e-63 | 218 |
| MS.gene052537.t1 | AT2G20800 | 36.193 | 373 | 200 | 8 | 103 | 461 | 60 | 408 | 7.80e-57 | 200 |
| MS.gene052537.t1 | AT2G20800 | 37.500 | 120 | 66 | 3 | 428 | 543 | 468 | 582 | 1.42e-14 | 77.0 |
| MS.gene052537.t1 | AT5G08740 | 24.675 | 539 | 303 | 22 | 33 | 530 | 20 | 496 | 3.70e-19 | 91.3 |
Find 131 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAGAGTTGTTCAACAAAAT+TGG | 0.171502 | 4.3:+23225468 | MS.gene052537:CDS |
| GTTGTTCTGTTCCTTAATTC+TGG | 0.179951 | 4.3:-23223450 | None:intergenic |
| TCTATAACTCTTTGTGTGTT+AGG | 0.192700 | 4.3:-23223521 | None:intergenic |
| GCTGCTTGTCGGTTTCTTAA+AGG | 0.225722 | 4.3:+23223647 | MS.gene052537:CDS |
| CATCACTCAAAACTATCTTT+TGG | 0.254195 | 4.3:-23224824 | None:intergenic |
| TAGATCAACAAGTGCCTTAT+AGG | 0.262816 | 4.3:-23225586 | None:intergenic |
| AGAAGATCAGGTGTTGCTTT+TGG | 0.283784 | 4.3:+23223332 | MS.gene052537:CDS |
| CCCTTGATACCAAAAGTTAA+AGG | 0.285822 | 4.3:-23224124 | None:intergenic |
| TTTCAGAAAGCATCAGATTA+AGG | 0.287447 | 4.3:-23224213 | None:intergenic |
| GTGTTGGTACCCTTGAATTC+AGG | 0.309821 | 4.3:+23223750 | MS.gene052537:CDS |
| GGAGCTGAGCCTTTAACTTT+TGG | 0.313907 | 4.3:+23224115 | MS.gene052537:CDS |
| TTCCTTATGGTCTCTTGGTT+TGG | 0.321151 | 4.3:+23224856 | MS.gene052537:CDS |
| GGTCTCTTGGTTTGGTCCAC+AGG | 0.327590 | 4.3:+23224864 | MS.gene052537:CDS |
| TTCGTATATTTCCAGAATTA+AGG | 0.335626 | 4.3:+23223439 | MS.gene052537:CDS |
| CTGCTTGTCGGTTTCTTAAA+GGG | 0.336052 | 4.3:+23223648 | MS.gene052537:CDS |
| TGTATCATGCTCAAGAAATA+AGG | 0.343406 | 4.3:+23224179 | MS.gene052537:CDS |
| GCAAAGGGATTGTCACTTGC+TGG | 0.349729 | 4.3:+23225762 | MS.gene052537:CDS |
| TAGAGTTGTTCAACAAAATT+GGG | 0.356038 | 4.3:+23225469 | MS.gene052537:CDS |
| ACAATTTGTGTATAAACATA+TGG | 0.358161 | 4.3:+23225542 | MS.gene052537:CDS |
| CTGCTGCATTGTGTAGTTAT+TGG | 0.365839 | 4.3:+23224391 | MS.gene052537:CDS |
| CTATAACTCTTTGTGTGTTA+GGG | 0.367616 | 4.3:-23223520 | None:intergenic |
| TGTCATATGCAACTTTGAAT+TGG | 0.368204 | 4.3:-23224075 | None:intergenic |
| GGCATCAGTAGGTGCCTATA+AGG | 0.371076 | 4.3:+23225572 | MS.gene052537:CDS |
| ATTCTGGAAATATACGAAAA+TGG | 0.382739 | 4.3:-23223434 | None:intergenic |
| TTCTTTCTAGCTTCCTGCAC+TGG | 0.393614 | 4.3:+23223833 | MS.gene052537:CDS |
| TGAAGTTCCTTATGGTCTCT+TGG | 0.393992 | 4.3:+23224851 | MS.gene052537:CDS |
| ATCTTACACGTGTGCTGAGC+TGG | 0.396198 | 4.3:+23225817 | MS.gene052537:CDS |
| GTCTGGAGTTTGTCTTATGC+GGG | 0.399394 | 4.3:+23224779 | MS.gene052537:intron |
| ATGGGAAGGTAAGGAGCCTT+TGG | 0.406390 | 4.3:-23223402 | None:intergenic |
| GTACCGGTTGGGCTGCTTGT+CGG | 0.407943 | 4.3:+23223636 | MS.gene052537:CDS |
| TTTGCACTTGGGGATTGTGC+TGG | 0.420564 | 4.3:+23225086 | MS.gene052537:CDS |
| TTGGTTTGGTCCACAGGAGT+TGG | 0.429676 | 4.3:+23224870 | MS.gene052537:CDS |
| TCCTTACCTTCCCATGTAGA+TGG | 0.433038 | 4.3:+23223410 | MS.gene052537:CDS |
| TGATACAGAATTGGTGTTGA+TGG | 0.434223 | 4.3:+23225032 | MS.gene052537:intron |
| CTGAATCTTCCAAGCTCTCC+AGG | 0.437706 | 4.3:+23224915 | MS.gene052537:CDS |
| GTGGAAGATGTCTTTGCACT+TGG | 0.442231 | 4.3:+23225074 | MS.gene052537:CDS |
| GATGGAACTGAAGTTCCTTA+TGG | 0.446289 | 4.3:+23224843 | MS.gene052537:CDS |
| AACAAAATTGGGAAACAGAA+TGG | 0.446795 | 4.3:+23225480 | MS.gene052537:CDS |
| TACCTTCCACCTGGAGAGCT+TGG | 0.449786 | 4.3:-23224924 | None:intergenic |
| CAGCAACAGACCTGAATTCA+AGG | 0.450864 | 4.3:-23223760 | None:intergenic |
| AGTTCCTGTTATTCCCCTCT+TGG | 0.451235 | 4.3:-23223483 | None:intergenic |
| TCTAGTCCTGCATATCTTGT+CGG | 0.452195 | 4.3:-23223572 | None:intergenic |
| AGAGTGGTTGTTCTCGGTAC+CGG | 0.453887 | 4.3:+23223620 | MS.gene052537:CDS |
| ACGAAAATGGTCCATCTACA+TGG | 0.454099 | 4.3:-23223421 | None:intergenic |
| GGTTGTTCTCGGTACCGGTT+GGG | 0.456139 | 4.3:+23223625 | MS.gene052537:CDS |
| AGCTAGAAAGAAGTATGAGT+TGG | 0.457476 | 4.3:-23223822 | None:intergenic |
| TGGAAGATGTCTTTGCACTT+GGG | 0.463774 | 4.3:+23225075 | MS.gene052537:CDS |
| GTTATTGGAGGTGGTCCTAC+AGG | 0.464952 | 4.3:+23224406 | MS.gene052537:CDS |
| GTGTGCTGAGCTGGAGGAAT+CGG | 0.469117 | 4.3:+23225826 | MS.gene052537:CDS |
| CATATCACCAAGGAATCATA+TGG | 0.470079 | 4.3:+23223700 | MS.gene052537:CDS |
| AAACCGACAAGCAGCCCAAC+CGG | 0.471084 | 4.3:-23223639 | None:intergenic |
| AGAAGCAACCTGAGAAGATC+AGG | 0.472613 | 4.3:+23223320 | MS.gene052537:CDS |
| GCATCCTGTATTCTACCAAC+AGG | 0.478437 | 4.3:-23223785 | None:intergenic |
| GTGAAAACCATATGATTCCT+TGG | 0.479965 | 4.3:-23223707 | None:intergenic |
| AAGCAACACCTGATCTTCTC+AGG | 0.480533 | 4.3:-23223328 | None:intergenic |
| TCTGCAGATGGCATCACACT+TGG | 0.481006 | 4.3:+23225516 | MS.gene052537:CDS |
| GACAAGCTTGTAATTGCAGC+TGG | 0.484313 | 4.3:+23224094 | MS.gene052537:CDS |
| TAACACACAAAGAGTTATAG+AGG | 0.487725 | 4.3:+23223523 | MS.gene052537:CDS |
| AAGCCTAGAGTGGTTGTTCT+CGG | 0.488864 | 4.3:+23223614 | MS.gene052537:CDS |
| GACCAAACCAAGAGACCATA+AGG | 0.496146 | 4.3:-23224858 | None:intergenic |
| TATGCAACTTTGAATTGGTA+AGG | 0.497896 | 4.3:-23224070 | None:intergenic |
| TGGTTGTTCTCGGTACCGGT+TGG | 0.498770 | 4.3:+23223624 | MS.gene052537:CDS |
| CAATTTGTGTATAAACATAT+GGG | 0.504254 | 4.3:+23225543 | MS.gene052537:CDS |
| GGAAGATGTCTTTGCACTTG+GGG | 0.505360 | 4.3:+23225076 | MS.gene052537:CDS |
| GTTTGTGTCAACTCCAGTGC+AGG | 0.507620 | 4.3:-23223846 | None:intergenic |
| TCTTATGCGGGGTGTGGTGA+AGG | 0.508837 | 4.3:+23224791 | MS.gene052537:CDS |
| CTGCATTGTGTAGTTATTGG+AGG | 0.508933 | 4.3:+23224394 | MS.gene052537:CDS |
| AGGCTAACCTGAGCTAAAGC+TGG | 0.509934 | 4.3:-23225140 | None:intergenic |
| GGTGCTTCCAGCTTTAGCTC+AGG | 0.512061 | 4.3:+23225133 | MS.gene052537:CDS |
| GCTAGAAAGAAGTATGAGTT+GGG | 0.516821 | 4.3:-23223821 | None:intergenic |
| CCTACAGGAGTGGAATTTAG+TGG | 0.520988 | 4.3:+23224421 | MS.gene052537:CDS |
| CTCTTTAGATAATCCACCAT+TGG | 0.522845 | 4.3:-23224047 | None:intergenic |
| TCCATCTACATGGGAAGGTA+AGG | 0.529367 | 4.3:-23223411 | None:intergenic |
| CATTCATGTCACACTCATTG+AGG | 0.529894 | 4.3:+23224504 | MS.gene052537:CDS |
| ATACTTTCATCCTTTGACGT+TGG | 0.533948 | 4.3:+23224634 | MS.gene052537:CDS |
| CATTGTGTAGTTATTGGAGG+TGG | 0.534574 | 4.3:+23224397 | MS.gene052537:CDS |
| GGACTAGAGGCAGCAAAACC+AGG | 0.534848 | 4.3:+23223587 | MS.gene052537:CDS |
| AGTCTGGAGTTTGTCTTATG+CGG | 0.535341 | 4.3:+23224778 | MS.gene052537:intron |
| CTGTCGAAGGCCAACGTCAA+AGG | 0.536614 | 4.3:-23224644 | None:intergenic |
| TGGAAGTAATGTACATGAGA+AGG | 0.538179 | 4.3:+23223352 | MS.gene052537:CDS |
| TTTGTGTGTTAGGGAGCTGA+TGG | 0.540218 | 4.3:-23223511 | None:intergenic |
| TCTTTGGCAGAGACAACAGC+AGG | 0.541549 | 4.3:+23225883 | MS.gene052537:CDS |
| ATAAGGCACTTGTTGATCTA+CGG | 0.542831 | 4.3:+23225589 | MS.gene052537:CDS |
| GGCAGAGACAACAGCAGGAT+AGG | 0.543946 | 4.3:+23225888 | MS.gene052537:CDS |
| CCACTAAATTCCACTCCTGT+AGG | 0.546000 | 4.3:-23224421 | None:intergenic |
| TCTTGAACAAACTGGAAGGC+CGG | 0.555532 | 4.3:+23225112 | MS.gene052537:CDS |
| GTCTCTGCCAAAGACAAAAG+TGG | 0.556692 | 4.3:-23225874 | None:intergenic |
| TGAGCTAAAGCTGGAAGCAC+CGG | 0.559885 | 4.3:-23225131 | None:intergenic |
| GATGATCCGACAAGATATGC+AGG | 0.562686 | 4.3:+23223566 | MS.gene052537:CDS |
| AGGTCTGTTGCTGAGCCTGT+TGG | 0.569427 | 4.3:+23223770 | MS.gene052537:CDS |
| ACAGAATTGGTGTTGATGGA+TGG | 0.570983 | 4.3:+23225036 | MS.gene052537:intron |
| GTACCGAGAACAACCACTCT+AGG | 0.573776 | 4.3:-23223617 | None:intergenic |
| GGAAAGGCTTTGTCTGCAGA+TGG | 0.574116 | 4.3:+23225504 | MS.gene052537:CDS |
| TCTTATGTTATAGGATGCAA+AGG | 0.575813 | 4.3:+23225746 | MS.gene052537:intron |
| AATGGTCCATCTACATGGGA+AGG | 0.577054 | 4.3:-23223416 | None:intergenic |
| TTGTTGGCTTCAACATGTGT+TGG | 0.577991 | 4.3:+23223734 | MS.gene052537:CDS |
| CTGATGCTTTCTGAAAATCC+AGG | 0.580189 | 4.3:+23224220 | MS.gene052537:CDS |
| TGCGAGGCAGTTACCAATGG+TGG | 0.582363 | 4.3:+23224034 | MS.gene052537:CDS |
| TGAGCCTGTTGGTAGAATAC+AGG | 0.585959 | 4.3:+23223781 | MS.gene052537:CDS |
| GGCTTCACATACCTTCCACC+TGG | 0.586382 | 4.3:-23224933 | None:intergenic |
| TTCCAAGCTCTCCAGGTGGA+AGG | 0.587295 | 4.3:+23224922 | MS.gene052537:CDS |
| GAGAGAACATTTACAACCAA+AGG | 0.588960 | 4.3:+23223386 | MS.gene052537:CDS |
| AGTTTGTCTTATGCGGGGTG+TGG | 0.589261 | 4.3:+23224785 | MS.gene052537:CDS |
| TACTGCGAGGCAGTTACCAA+TGG | 0.597374 | 4.3:+23224031 | MS.gene052537:CDS |
| CTTATGTTATAGGATGCAAA+GGG | 0.602916 | 4.3:+23225747 | MS.gene052537:intron |
| TGTTGATCTACGGCAATCCA+AGG | 0.602932 | 4.3:+23225599 | MS.gene052537:CDS |
| TGGGAAACAGAATGGAGGAA+AGG | 0.603382 | 4.3:+23225488 | MS.gene052537:CDS |
| ATGGGGAGCATGGCATCAGT+AGG | 0.604143 | 4.3:+23225561 | MS.gene052537:CDS |
| GTATAAACATATGGGGAGCA+TGG | 0.604718 | 4.3:+23225551 | MS.gene052537:CDS |
| AATACAGGATGCACTAGCAA+AGG | 0.606941 | 4.3:+23223796 | MS.gene052537:CDS |
| ATGGATGCGTGTTCCGTCTG+TGG | 0.610196 | 4.3:+23225055 | MS.gene052537:CDS |
| CTATAACAATGGCATTAGCA+AGG | 0.610697 | 4.3:+23223291 | None:intergenic |
| CTCAGAGGGACCAACTCCTG+TGG | 0.615481 | 4.3:-23224880 | None:intergenic |
| CGAAAATGGTCCATCTACAT+GGG | 0.615536 | 4.3:-23223420 | None:intergenic |
| TATGCGGGGTGTGGTGAAGG+AGG | 0.616063 | 4.3:+23224794 | MS.gene052537:CDS |
| GACAAGATATGCAGGACTAG+AGG | 0.619013 | 4.3:+23223574 | MS.gene052537:CDS |
| TGGAGGTGGTCCTACAGGAG+TGG | 0.621881 | 4.3:+23224411 | MS.gene052537:CDS |
| GCTTCGTTGCATACTGTCGA+AGG | 0.629576 | 4.3:-23224657 | None:intergenic |
| GCAAAGACATCTTCCACAGA+CGG | 0.636642 | 4.3:-23225068 | None:intergenic |
| TTACACGTGTGCTGAGCTGG+AGG | 0.642106 | 4.3:+23225820 | MS.gene052537:CDS |
| TCTGGAGTTTGTCTTATGCG+GGG | 0.644473 | 4.3:+23224780 | MS.gene052537:CDS |
| AGCAACAGACCTGAATTCAA+GGG | 0.646467 | 4.3:-23223759 | None:intergenic |
| ACCAGGTGAAAAGCCTAGAG+TGG | 0.649954 | 4.3:+23223604 | MS.gene052537:CDS |
| TGACAGGTTGCTGAAAGACA+AGG | 0.650294 | 4.3:+23225435 | MS.gene052537:intron |
| ACACATGTTGAAGCCAACAA+AGG | 0.657554 | 4.3:-23223731 | None:intergenic |
| AAAATTGGGAAACAGAATGG+AGG | 0.666719 | 4.3:+23225483 | MS.gene052537:CDS |
| AATTTGTGTATAAACATATG+GGG | 0.676076 | 4.3:+23225544 | MS.gene052537:CDS |
| TGCAACGAAGCACTTAACAA+AGG | 0.676652 | 4.3:+23224669 | MS.gene052537:CDS |
| AATCTTCCAAGCTCTCCAGG+TGG | 0.690106 | 4.3:+23224918 | MS.gene052537:CDS |
| ATGTCAACAGGTCTACTGCG+AGG | 0.733020 | 4.3:+23224018 | MS.gene052537:intron |
| ATGTTGTGTGCATATCACCA+AGG | 0.767641 | 4.3:+23223690 | MS.gene052537:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACATTTTAAATTTTAATATC+TGG | - | chr4.3:23224957-23224976 | None:intergenic | 10.0% |
| !!! | ATTTGTTATAATAATTATGC+AGG | + | chr4.3:23224283-23224302 | MS.gene052537:intron | 15.0% |
| !! | AATGTAAAAAATTCCAATAG+AGG | + | chr4.3:23225247-23225266 | MS.gene052537:intron | 20.0% |
| !! | AATTATGAAAAGTTAAACAG+TGG | - | chr4.3:23224603-23224622 | None:intergenic | 20.0% |
| !! | AATTTGTGTATAAACATATG+GGG | + | chr4.3:23225544-23225563 | MS.gene052537:CDS | 20.0% |
| !! | ACAATTTGTGTATAAACATA+TGG | + | chr4.3:23225542-23225561 | MS.gene052537:CDS | 20.0% |
| !! | AGACAATATAGATAAATGTT+AGG | - | chr4.3:23225219-23225238 | None:intergenic | 20.0% |
| !! | ATGTAAAAAATTCCAATAGA+GGG | + | chr4.3:23225248-23225267 | MS.gene052537:intron | 20.0% |
| !! | CAAAATGTATCTTATGTTAT+AGG | + | chr4.3:23225737-23225756 | MS.gene052537:intron | 20.0% |
| !! | CAATTTGTGTATAAACATAT+GGG | + | chr4.3:23225543-23225562 | MS.gene052537:CDS | 20.0% |
| !!! | AAAATGTTTTTCATTATGAC+AGG | + | chr4.3:23224343-23224362 | MS.gene052537:intron | 20.0% |
| !!! | CTGTTTAACTTTTCATAATT+AGG | + | chr4.3:23224603-23224622 | MS.gene052537:intron | 20.0% |
| !!! | TCATTATTTTTTTATGCCAA+AGG | + | chr4.3:23224312-23224331 | MS.gene052537:intron | 20.0% |
| !!! | TCTATTGGAATTTTTTACAT+TGG | - | chr4.3:23225248-23225267 | None:intergenic | 20.0% |
| ! | ACAAAACATCATAGACAATA+AGG | - | chr4.3:23225163-23225182 | None:intergenic | 25.0% |
| ! | GAAAAACTATACTGTTACAA+TGG | + | chr4.3:23223906-23223925 | MS.gene052537:intron | 25.0% |
| ! | GCTTAAAACTAAACTAAGTA+TGG | - | chr4.3:23224260-23224279 | None:intergenic | 25.0% |
| ! | GTTATAATAATTATGCAGGT+GGG | + | chr4.3:23224287-23224306 | MS.gene052537:intron | 25.0% |
| ! | TAGAGTTGTTCAACAAAATT+GGG | + | chr4.3:23225469-23225488 | MS.gene052537:CDS | 25.0% |
| ! | TGTTATAATAATTATGCAGG+TGG | + | chr4.3:23224286-23224305 | MS.gene052537:intron | 25.0% |
| ! | TTCGTATATTTCCAGAATTA+AGG | + | chr4.3:23223439-23223458 | MS.gene052537:CDS | 25.0% |
| !! | AGTATAGTTTTTCTAAACGA+AGG | - | chr4.3:23223899-23223918 | None:intergenic | 25.0% |
| !! | ATCACTCAAAACTATCTTTT+GGG | - | chr4.3:23224826-23224845 | None:intergenic | 25.0% |
| !! | ATTCAATTTTTGTATCAGTC+TGG | + | chr4.3:23224762-23224781 | MS.gene052537:intron | 25.0% |
| !! | ATTCTGGAAATATACGAAAA+TGG | - | chr4.3:23223437-23223456 | None:intergenic | 25.0% |
| !! | GTATAGTTTTTCTAAACGAA+GGG | - | chr4.3:23223898-23223917 | None:intergenic | 25.0% |
| AACAAAATTGGGAAACAGAA+TGG | + | chr4.3:23225480-23225499 | MS.gene052537:CDS | 30.0% | |
| ATGCATAGTACTACAGAAAT+AGG | + | chr4.3:23225314-23225333 | MS.gene052537:intron | 30.0% | |
| CTATAACTCTTTGTGTGTTA+GGG | - | chr4.3:23223523-23223542 | None:intergenic | 30.0% | |
| CTCTAATGTCTAATTTACAC+TGG | + | chr4.3:23225654-23225673 | MS.gene052537:intron | 30.0% | |
| CTTATGTTATAGGATGCAAA+GGG | + | chr4.3:23225747-23225766 | MS.gene052537:intron | 30.0% | |
| GACAGTTAATCATTGAAGAT+TGG | - | chr4.3:23224725-23224744 | None:intergenic | 30.0% | |
| GTAGAGTTGTTCAACAAAAT+TGG | + | chr4.3:23225468-23225487 | MS.gene052537:CDS | 30.0% | |
| GTTGTTGAATGATACAGAAT+TGG | + | chr4.3:23225023-23225042 | MS.gene052537:intron | 30.0% | |
| TAACACACAAAGAGTTATAG+AGG | + | chr4.3:23223523-23223542 | MS.gene052537:CDS | 30.0% | |
| TATGCAACTTTGAATTGGTA+AGG | - | chr4.3:23224073-23224092 | None:intergenic | 30.0% | |
| TCTATAACTCTTTGTGTGTT+AGG | - | chr4.3:23223524-23223543 | None:intergenic | 30.0% | |
| TCTTATGTTATAGGATGCAA+AGG | + | chr4.3:23225746-23225765 | MS.gene052537:intron | 30.0% | |
| TGTATCATGCTCAAGAAATA+AGG | + | chr4.3:23224179-23224198 | MS.gene052537:CDS | 30.0% | |
| TGTCATATGCAACTTTGAAT+TGG | - | chr4.3:23224078-23224097 | None:intergenic | 30.0% | |
| ! | AACATGAAATTTTCCAAGAG+GGG | + | chr4.3:23223470-23223489 | MS.gene052537:CDS | 30.0% |
| ! | ACAACATGAAATTTTCCAAG+AGG | + | chr4.3:23223468-23223487 | MS.gene052537:CDS | 30.0% |
| ! | CAACATGAAATTTTCCAAGA+GGG | + | chr4.3:23223469-23223488 | MS.gene052537:CDS | 30.0% |
| ! | CAATTTTACTTCATGTCAAC+AGG | + | chr4.3:23224006-23224025 | MS.gene052537:intron | 30.0% |
| ! | CATCACTCAAAACTATCTTT+TGG | - | chr4.3:23224827-23224846 | None:intergenic | 30.0% |
| ! | TCACTCAAAACTATCTTTTG+GGG | - | chr4.3:23224825-23224844 | None:intergenic | 30.0% |
| ! | TGATGTTTTGTCAGTACATA+TGG | + | chr4.3:23225172-23225191 | MS.gene052537:intron | 30.0% |
| ! | TTTTGTTGAACAACTCTACA+AGG | - | chr4.3:23225467-23225486 | None:intergenic | 30.0% |
| !! | CCTTTAACTTTTGGTATCAA+GGG | + | chr4.3:23224124-23224143 | MS.gene052537:CDS | 30.0% |
| !! | TTTCAGAAAGCATCAGATTA+AGG | - | chr4.3:23224216-23224235 | None:intergenic | 30.0% |
| !!! | AGTTTTTTGACAAACTCAGA+GGG | - | chr4.3:23224897-23224916 | None:intergenic | 30.0% |
| !!! | CAAAAGATAGTTTTGAGTGA+TGG | + | chr4.3:23224825-23224844 | MS.gene052537:CDS | 30.0% |
| AAAATTGGGAAACAGAATGG+AGG | + | chr4.3:23225483-23225502 | MS.gene052537:CDS | 35.0% | |
| ATACGCGATCAAAACACAAA+AGG | - | chr4.3:23224699-23224718 | None:intergenic | 35.0% | |
| ATACTTTCATCCTTTGACGT+TGG | + | chr4.3:23224634-23224653 | MS.gene052537:CDS | 35.0% | |
| CATATCACCAAGGAATCATA+TGG | + | chr4.3:23223700-23223719 | MS.gene052537:CDS | 35.0% | |
| CCCTTGATACCAAAAGTTAA+AGG | - | chr4.3:23224127-23224146 | None:intergenic | 35.0% | |
| CTCTTTAGATAATCCACCAT+TGG | - | chr4.3:23224050-23224069 | None:intergenic | 35.0% | |
| GAAACTTTCCCATTATACCT+TGG | - | chr4.3:23225619-23225638 | None:intergenic | 35.0% | |
| GAGAGAACATTTACAACCAA+AGG | + | chr4.3:23223386-23223405 | MS.gene052537:CDS | 35.0% | |
| GTGAAAACCATATGATTCCT+TGG | - | chr4.3:23223710-23223729 | None:intergenic | 35.0% | |
| GTTGTTCTGTTCCTTAATTC+TGG | - | chr4.3:23223453-23223472 | None:intergenic | 35.0% | |
| TAGATCAACAAGTGCCTTAT+AGG | - | chr4.3:23225589-23225608 | None:intergenic | 35.0% | |
| TGGAAGTAATGTACATGAGA+AGG | + | chr4.3:23223352-23223371 | MS.gene052537:CDS | 35.0% | |
| ! | AGCTAGAAAGAAGTATGAGT+TGG | - | chr4.3:23223825-23223844 | None:intergenic | 35.0% |
| ! | ATAAGGCACTTGTTGATCTA+CGG | + | chr4.3:23225589-23225608 | MS.gene052537:CDS | 35.0% |
| ! | GCTAGAAAGAAGTATGAGTT+GGG | - | chr4.3:23223824-23223843 | None:intergenic | 35.0% |
| ! | GTTTTCTTGAACAAACTGGA+AGG | + | chr4.3:23225108-23225127 | MS.gene052537:CDS | 35.0% |
| ! | TATGGTTTTCACTCCTTTGT+TGG | + | chr4.3:23223718-23223737 | MS.gene052537:CDS | 35.0% |
| ! | TTTTGGTATCAAGGGAGTAA+AGG | + | chr4.3:23224132-23224151 | MS.gene052537:CDS | 35.0% |
| !! | AACATTTTCAGCTTAGCCTT+TGG | - | chr4.3:23224331-23224350 | None:intergenic | 35.0% |
| !! | GCCTTTAACTTTTGGTATCA+AGG | + | chr4.3:23224123-23224142 | MS.gene052537:CDS | 35.0% |
| !! | TGATACAGAATTGGTGTTGA+TGG | + | chr4.3:23225032-23225051 | MS.gene052537:intron | 35.0% |
| !!! | CAGTTTTTTGACAAACTCAG+AGG | - | chr4.3:23224898-23224917 | None:intergenic | 35.0% |
| AATACAGGATGCACTAGCAA+AGG | + | chr4.3:23223796-23223815 | MS.gene052537:CDS | 40.0% | |
| ACACATGTTGAAGCCAACAA+AGG | - | chr4.3:23223734-23223753 | None:intergenic | 40.0% | |
| ACGAAAATGGTCCATCTACA+TGG | - | chr4.3:23223424-23223443 | None:intergenic | 40.0% | |
| ACGGCAATCCAAGGTATAAT+GGG | + | chr4.3:23225608-23225627 | MS.gene052537:intron | 40.0% | |
| AGCAACAGACCTGAATTCAA+GGG | - | chr4.3:23223762-23223781 | None:intergenic | 40.0% | |
| ATGTTGTGTGCATATCACCA+AGG | + | chr4.3:23223690-23223709 | MS.gene052537:CDS | 40.0% | |
| CATTCATGTCACACTCATTG+AGG | + | chr4.3:23224504-23224523 | MS.gene052537:CDS | 40.0% | |
| CATTGTGTAGTTATTGGAGG+TGG | + | chr4.3:23224397-23224416 | MS.gene052537:CDS | 40.0% | |
| CGAAAATGGTCCATCTACAT+GGG | - | chr4.3:23223423-23223442 | None:intergenic | 40.0% | |
| CTGCATTGTGTAGTTATTGG+AGG | + | chr4.3:23224394-23224413 | MS.gene052537:CDS | 40.0% | |
| CTGCTGCATTGTGTAGTTAT+TGG | + | chr4.3:23224391-23224410 | MS.gene052537:CDS | 40.0% | |
| GAGTATACTTTCCTATGCAC+TGG | + | chr4.3:23225408-23225427 | MS.gene052537:intron | 40.0% | |
| GATGGAACTGAAGTTCCTTA+TGG | + | chr4.3:23224843-23224862 | MS.gene052537:CDS | 40.0% | |
| GTATAAACATATGGGGAGCA+TGG | + | chr4.3:23225551-23225570 | MS.gene052537:CDS | 40.0% | |
| TACGGCAATCCAAGGTATAA+TGG | + | chr4.3:23225607-23225626 | MS.gene052537:intron | 40.0% | |
| TCTAGTCCTGCATATCTTGT+CGG | - | chr4.3:23223575-23223594 | None:intergenic | 40.0% | |
| TGAAGTTCCTTATGGTCTCT+TGG | + | chr4.3:23224851-23224870 | MS.gene052537:CDS | 40.0% | |
| TGGAAGATGTCTTTGCACTT+GGG | + | chr4.3:23225075-23225094 | MS.gene052537:CDS | 40.0% | |
| TTCCTTATGGTCTCTTGGTT+TGG | + | chr4.3:23224856-23224875 | MS.gene052537:CDS | 40.0% | |
| ! | AGTCTGGAGTTTGTCTTATG+CGG | + | chr4.3:23224778-23224797 | MS.gene052537:intron | 40.0% |
| ! | ATGCTTTCTGAAAATCCAGG+TGG | + | chr4.3:23224223-23224242 | MS.gene052537:intron | 40.0% |
| ! | CTGATGCTTTCTGAAAATCC+AGG | + | chr4.3:23224220-23224239 | MS.gene052537:CDS | 40.0% |
| ! | GTTTTACGTGGCAGTTAACT+GGG | + | chr4.3:23225848-23225867 | MS.gene052537:CDS | 40.0% |
| ! | TGCAACGAAGCACTTAACAA+AGG | + | chr4.3:23224669-23224688 | MS.gene052537:CDS | 40.0% |
| ! | TGCTTTCTGAAAATCCAGGT+GGG | + | chr4.3:23224224-23224243 | MS.gene052537:intron | 40.0% |
| ! | TTTTACGTGGCAGTTAACTG+GGG | + | chr4.3:23225849-23225868 | MS.gene052537:CDS | 40.0% |
| ! | TTTTCCAAGAGGGGAATAAC+AGG | + | chr4.3:23223479-23223498 | MS.gene052537:CDS | 40.0% |
| !! | ACAGAATTGGTGTTGATGGA+TGG | + | chr4.3:23225036-23225055 | MS.gene052537:intron | 40.0% |
| !! | CTGCTTGTCGGTTTCTTAAA+GGG | + | chr4.3:23223648-23223667 | MS.gene052537:CDS | 40.0% |
| !! | GTTTTGTCAGCTGGTTGATA+TGG | + | chr4.3:23225784-23225803 | MS.gene052537:CDS | 40.0% |
| !! | TTGTTGGCTTCAACATGTGT+TGG | + | chr4.3:23223734-23223753 | MS.gene052537:CDS | 40.0% |
| !!! | AGAAGATCAGGTGTTGCTTT+TGG | + | chr4.3:23223332-23223351 | MS.gene052537:CDS | 40.0% |
| !!! | GCTGGTTTTCTTGAACAAAC+TGG | + | chr4.3:23225104-23225123 | MS.gene052537:CDS | 40.0% |
| AAGCAACACCTGATCTTCTC+AGG | - | chr4.3:23223331-23223350 | None:intergenic | 45.0% | |
| AAGCCTAGAGTGGTTGTTCT+CGG | + | chr4.3:23223614-23223633 | MS.gene052537:CDS | 45.0% | |
| AATGGTCCATCTACATGGGA+AGG | - | chr4.3:23223419-23223438 | None:intergenic | 45.0% | |
| AGAAGCAACCTGAGAAGATC+AGG | + | chr4.3:23223320-23223339 | MS.gene052537:CDS | 45.0% | |
| AGTTCCTGTTATTCCCCTCT+TGG | - | chr4.3:23223486-23223505 | None:intergenic | 45.0% | |
| ATGGATATGAAACACCCACC+TGG | - | chr4.3:23224241-23224260 | None:intergenic | 45.0% | |
| CAGCAACAGACCTGAATTCA+AGG | - | chr4.3:23223763-23223782 | None:intergenic | 45.0% | |
| CCACTAAATTCCACTCCTGT+AGG | - | chr4.3:23224424-23224443 | None:intergenic | 45.0% | |
| CCTACAGGAGTGGAATTTAG+TGG | + | chr4.3:23224421-23224440 | MS.gene052537:CDS | 45.0% | |
| GACAAGATATGCAGGACTAG+AGG | + | chr4.3:23223574-23223593 | MS.gene052537:CDS | 45.0% | |
| GACAAGCTTGTAATTGCAGC+TGG | + | chr4.3:23224094-23224113 | MS.gene052537:CDS | 45.0% | |
| GACCAAACCAAGAGACCATA+AGG | - | chr4.3:23224861-23224880 | None:intergenic | 45.0% | |
| GATGATCCGACAAGATATGC+AGG | + | chr4.3:23223566-23223585 | MS.gene052537:CDS | 45.0% | |
| GCAAAGACATCTTCCACAGA+CGG | - | chr4.3:23225071-23225090 | None:intergenic | 45.0% | |
| GCATCCTGTATTCTACCAAC+AGG | - | chr4.3:23223788-23223807 | None:intergenic | 45.0% | |
| GGAAGATGTCTTTGCACTTG+GGG | + | chr4.3:23225076-23225095 | MS.gene052537:CDS | 45.0% | |
| GTCTCTGCCAAAGACAAAAG+TGG | - | chr4.3:23225877-23225896 | None:intergenic | 45.0% | |
| GTGGAAGATGTCTTTGCACT+TGG | + | chr4.3:23225074-23225093 | MS.gene052537:CDS | 45.0% | |
| TCCATCTACATGGGAAGGTA+AGG | - | chr4.3:23223414-23223433 | None:intergenic | 45.0% | |
| TCCTTACCTTCCCATGTAGA+TGG | + | chr4.3:23223410-23223429 | MS.gene052537:CDS | 45.0% | |
| TCTTGAACAAACTGGAAGGC+CGG | + | chr4.3:23225112-23225131 | MS.gene052537:CDS | 45.0% | |
| TGACAGGTTGCTGAAAGACA+AGG | + | chr4.3:23225435-23225454 | MS.gene052537:intron | 45.0% | |
| TGGGAAACAGAATGGAGGAA+AGG | + | chr4.3:23225488-23225507 | MS.gene052537:CDS | 45.0% | |
| TGTTGATCTACGGCAATCCA+AGG | + | chr4.3:23225599-23225618 | MS.gene052537:CDS | 45.0% | |
| TTTGTGTGTTAGGGAGCTGA+TGG | - | chr4.3:23223514-23223533 | None:intergenic | 45.0% | |
| ! | GGTTTTACGTGGCAGTTAAC+TGG | + | chr4.3:23225847-23225866 | MS.gene052537:CDS | 45.0% |
| ! | GTCTGGAGTTTGTCTTATGC+GGG | + | chr4.3:23224779-23224798 | MS.gene052537:intron | 45.0% |
| ! | GTGTTGGTACCCTTGAATTC+AGG | + | chr4.3:23223750-23223769 | MS.gene052537:CDS | 45.0% |
| ! | TCTGGAGTTTGTCTTATGCG+GGG | + | chr4.3:23224780-23224799 | MS.gene052537:CDS | 45.0% |
| ! | TGAGCCTGTTGGTAGAATAC+AGG | + | chr4.3:23223781-23223800 | MS.gene052537:CDS | 45.0% |
| !! | GCTGCTTGTCGGTTTCTTAA+AGG | + | chr4.3:23223647-23223666 | MS.gene052537:CDS | 45.0% |
| !! | GGAGCTGAGCCTTTAACTTT+TGG | + | chr4.3:23224115-23224134 | MS.gene052537:CDS | 45.0% |
| !! | TCCAATAGAGGGTACTTGAC+AGG | + | chr4.3:23225259-23225278 | MS.gene052537:intron | 45.0% |
| !! | TGGGGAACCACTTTTGTCTT+TGG | + | chr4.3:23225867-23225886 | MS.gene052537:CDS | 45.0% |
| !! | TTCTTTCTAGCTTCCTGCAC+TGG | + | chr4.3:23223833-23223852 | MS.gene052537:CDS | 45.0% |
| AATCTTCCAAGCTCTCCAGG+TGG | + | chr4.3:23224918-23224937 | MS.gene052537:CDS | 50.0% | |
| ACCAGGTGAAAAGCCTAGAG+TGG | + | chr4.3:23223604-23223623 | MS.gene052537:CDS | 50.0% | |
| AGAGTGGTTGTTCTCGGTAC+CGG | + | chr4.3:23223620-23223639 | MS.gene052537:CDS | 50.0% | |
| AGGCTAACCTGAGCTAAAGC+TGG | - | chr4.3:23225143-23225162 | None:intergenic | 50.0% | |
| AGTTTGTCTTATGCGGGGTG+TGG | + | chr4.3:23224785-23224804 | MS.gene052537:CDS | 50.0% | |
| ATCTTACACGTGTGCTGAGC+TGG | + | chr4.3:23225817-23225836 | MS.gene052537:CDS | 50.0% | |
| ATGGGAAGGTAAGGAGCCTT+TGG | - | chr4.3:23223405-23223424 | None:intergenic | 50.0% | |
| ATGTCAACAGGTCTACTGCG+AGG | + | chr4.3:23224018-23224037 | MS.gene052537:intron | 50.0% | |
| CTGAATCTTCCAAGCTCTCC+AGG | + | chr4.3:23224915-23224934 | MS.gene052537:CDS | 50.0% | |
| GCCTGTCAAGTACCCTCTAT+TGG | - | chr4.3:23225263-23225282 | None:intergenic | 50.0% | |
| GCTTCGTTGCATACTGTCGA+AGG | - | chr4.3:23224660-23224679 | None:intergenic | 50.0% | |
| GGCATCAGTAGGTGCCTATA+AGG | + | chr4.3:23225572-23225591 | MS.gene052537:CDS | 50.0% | |
| GTACCGAGAACAACCACTCT+AGG | - | chr4.3:23223620-23223639 | None:intergenic | 50.0% | |
| GTTATTGGAGGTGGTCCTAC+AGG | + | chr4.3:23224406-23224425 | MS.gene052537:CDS | 50.0% | |
| GTTTGTGTCAACTCCAGTGC+AGG | - | chr4.3:23223849-23223868 | None:intergenic | 50.0% | |
| TACTGCGAGGCAGTTACCAA+TGG | + | chr4.3:23224031-23224050 | MS.gene052537:CDS | 50.0% | |
| TCTGCAGATGGCATCACACT+TGG | + | chr4.3:23225516-23225535 | MS.gene052537:CDS | 50.0% | |
| TCTTTGGCAGAGACAACAGC+AGG | + | chr4.3:23225883-23225902 | MS.gene052537:CDS | 50.0% | |
| TTTGCACTTGGGGATTGTGC+TGG | + | chr4.3:23225086-23225105 | MS.gene052537:CDS | 50.0% | |
| ! | ACCACTCTAGGCTTTTCACC+TGG | - | chr4.3:23223608-23223627 | None:intergenic | 50.0% |
| ! | GCAAAGGGATTGTCACTTGC+TGG | + | chr4.3:23225762-23225781 | MS.gene052537:CDS | 50.0% |
| ! | GGAAAGGCTTTGTCTGCAGA+TGG | + | chr4.3:23225504-23225523 | MS.gene052537:CDS | 50.0% |
| ! | TGAGCTAAAGCTGGAAGCAC+CGG | - | chr4.3:23225134-23225153 | None:intergenic | 50.0% |
| !! | CTGGAGGAATCGGTTTTACG+TGG | + | chr4.3:23225836-23225855 | MS.gene052537:CDS | 50.0% |
| !! | TTGGTTTGGTCCACAGGAGT+TGG | + | chr4.3:23224870-23224889 | MS.gene052537:CDS | 50.0% |
| !!! | CACTTGCTGGTTTTGTCAGC+TGG | + | chr4.3:23225775-23225794 | MS.gene052537:CDS | 50.0% |
| AAACCGACAAGCAGCCCAAC+CGG | - | chr4.3:23223642-23223661 | None:intergenic | 55.0% | |
| AGGTCTGTTGCTGAGCCTGT+TGG | + | chr4.3:23223770-23223789 | MS.gene052537:CDS | 55.0% | |
| ATGGATGCGTGTTCCGTCTG+TGG | + | chr4.3:23225055-23225074 | MS.gene052537:CDS | 55.0% | |
| CCTGTCAGTGACCAGTGCAT+AGG | - | chr4.3:23225422-23225441 | None:intergenic | 55.0% | |
| CTGTCGAAGGCCAACGTCAA+AGG | - | chr4.3:23224647-23224666 | None:intergenic | 55.0% | |
| GGACTAGAGGCAGCAAAACC+AGG | + | chr4.3:23223587-23223606 | MS.gene052537:CDS | 55.0% | |
| GGCAGAGACAACAGCAGGAT+AGG | + | chr4.3:23225888-23225907 | MS.gene052537:CDS | 55.0% | |
| GGCTTCACATACCTTCCACC+TGG | - | chr4.3:23224936-23224955 | None:intergenic | 55.0% | |
| GTGTGCTGAGCTGGAGGAAT+CGG | + | chr4.3:23225826-23225845 | MS.gene052537:CDS | 55.0% | |
| TACCTTCCACCTGGAGAGCT+TGG | - | chr4.3:23224927-23224946 | None:intergenic | 55.0% | |
| TCTTATGCGGGGTGTGGTGA+AGG | + | chr4.3:23224791-23224810 | MS.gene052537:CDS | 55.0% | |
| TGCGAGGCAGTTACCAATGG+TGG | + | chr4.3:23224034-23224053 | MS.gene052537:CDS | 55.0% | |
| TTACACGTGTGCTGAGCTGG+AGG | + | chr4.3:23225820-23225839 | MS.gene052537:CDS | 55.0% | |
| TTCCAAGCTCTCCAGGTGGA+AGG | + | chr4.3:23224922-23224941 | MS.gene052537:CDS | 55.0% | |
| ! | ATGGGGAGCATGGCATCAGT+AGG | + | chr4.3:23225561-23225580 | MS.gene052537:CDS | 55.0% |
| ! | CCTATGCACTGGTCACTGAC+AGG | + | chr4.3:23225419-23225438 | MS.gene052537:intron | 55.0% |
| ! | GGTGCTTCCAGCTTTAGCTC+AGG | + | chr4.3:23225133-23225152 | MS.gene052537:CDS | 55.0% |
| !! | GGTCTCTTGGTTTGGTCCAC+AGG | + | chr4.3:23224864-23224883 | MS.gene052537:CDS | 55.0% |
| !! | GGTTGTTCTCGGTACCGGTT+GGG | + | chr4.3:23223625-23223644 | MS.gene052537:CDS | 55.0% |
| !! | TGGTTGTTCTCGGTACCGGT+TGG | + | chr4.3:23223624-23223643 | MS.gene052537:CDS | 55.0% |
| CTCAGAGGGACCAACTCCTG+TGG | - | chr4.3:23224883-23224902 | None:intergenic | 60.0% | |
| TATGCGGGGTGTGGTGAAGG+AGG | + | chr4.3:23224794-23224813 | MS.gene052537:CDS | 60.0% | |
| TGGAGGTGGTCCTACAGGAG+TGG | + | chr4.3:23224411-23224430 | MS.gene052537:CDS | 60.0% | |
| !! | GTACCGGTTGGGCTGCTTGT+CGG | + | chr4.3:23223636-23223655 | MS.gene052537:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 23223299 | 23225914 | 23223299 | ID=MS.gene052537 |
| chr4.3 | mRNA | 23223299 | 23225914 | 23223299 | ID=MS.gene052537.t1;Parent=MS.gene052537 |
| chr4.3 | exon | 23223299 | 23223877 | 23223299 | ID=MS.gene052537.t1.exon1;Parent=MS.gene052537.t1 |
| chr4.3 | CDS | 23223299 | 23223877 | 23223299 | ID=cds.MS.gene052537.t1;Parent=MS.gene052537.t1 |
| chr4.3 | exon | 23224028 | 23224241 | 23224028 | ID=MS.gene052537.t1.exon2;Parent=MS.gene052537.t1 |
| chr4.3 | CDS | 23224028 | 23224241 | 23224028 | ID=cds.MS.gene052537.t1;Parent=MS.gene052537.t1 |
| chr4.3 | exon | 23224365 | 23224525 | 23224365 | ID=MS.gene052537.t1.exon3;Parent=MS.gene052537.t1 |
| chr4.3 | CDS | 23224365 | 23224525 | 23224365 | ID=cds.MS.gene052537.t1;Parent=MS.gene052537.t1 |
| chr4.3 | exon | 23224625 | 23224690 | 23224625 | ID=MS.gene052537.t1.exon4;Parent=MS.gene052537.t1 |
| chr4.3 | CDS | 23224625 | 23224690 | 23224625 | ID=cds.MS.gene052537.t1;Parent=MS.gene052537.t1 |
| chr4.3 | exon | 23224780 | 23224943 | 23224780 | ID=MS.gene052537.t1.exon5;Parent=MS.gene052537.t1 |
| chr4.3 | CDS | 23224780 | 23224943 | 23224780 | ID=cds.MS.gene052537.t1;Parent=MS.gene052537.t1 |
| chr4.3 | exon | 23225040 | 23225154 | 23225040 | ID=MS.gene052537.t1.exon6;Parent=MS.gene052537.t1 |
| chr4.3 | CDS | 23225040 | 23225154 | 23225040 | ID=cds.MS.gene052537.t1;Parent=MS.gene052537.t1 |
| chr4.3 | exon | 23225441 | 23225620 | 23225441 | ID=MS.gene052537.t1.exon7;Parent=MS.gene052537.t1 |
| chr4.3 | CDS | 23225441 | 23225620 | 23225441 | ID=cds.MS.gene052537.t1;Parent=MS.gene052537.t1 |
| chr4.3 | exon | 23225759 | 23225914 | 23225759 | ID=MS.gene052537.t1.exon8;Parent=MS.gene052537.t1 |
| chr4.3 | CDS | 23225759 | 23225914 | 23225759 | ID=cds.MS.gene052537.t1;Parent=MS.gene052537.t1 |
| Gene Sequence |
| Protein sequence |
