Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32429.t1 | XP_013466245.1 | 52.7 | 723 | 76 | 2 | 1 | 723 | 1 | 457 | 3.80E-104 | 389.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32429.t1 | A0A072VFB4 | 52.7 | 723 | 76 | 2 | 1 | 723 | 1 | 457 | 2.7e-104 | 389.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene32429 | 0.811708 | 6.12E-51 | -1.69E-46 |
| MS.gene05157 | MS.gene32429 | 0.826889 | 2.12E-54 | -1.69E-46 |
| MS.gene051744 | MS.gene32429 | 0.801727 | 7.86E-49 | -1.69E-46 |
| MS.gene052732 | MS.gene32429 | 0.813101 | 3.03E-51 | -1.69E-46 |
| MS.gene053144 | MS.gene32429 | 0.806381 | 8.46E-50 | -1.69E-46 |
| MS.gene053226 | MS.gene32429 | 0.8042 | 2.42E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene32429 | 0.806433 | 8.25E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene32429 | 0.821551 | 3.80E-53 | -1.69E-46 |
| MS.gene055466 | MS.gene32429 | 0.821534 | 3.84E-53 | -1.69E-46 |
| MS.gene055468 | MS.gene32429 | 0.804517 | 2.08E-49 | -1.69E-46 |
| MS.gene055469 | MS.gene32429 | 0.8009 | 1.16E-48 | -1.69E-46 |
| MS.gene055513 | MS.gene32429 | 0.80445 | 2.15E-49 | -1.69E-46 |
| MS.gene055537 | MS.gene32429 | 0.805086 | 1.58E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32429.t1 | MTR_1g026800 | 80.655 | 336 | 45 | 1 | 1 | 336 | 1 | 316 | 3.55e-179 | 521 |
| MS.gene32429.t1 | MTR_1g026800 | 85.950 | 242 | 34 | 0 | 501 | 742 | 235 | 476 | 7.27e-145 | 433 |
| MS.gene32429.t1 | MTR_1g026800 | 89.024 | 82 | 9 | 0 | 419 | 500 | 235 | 316 | 1.30e-35 | 141 |
| MS.gene32429.t1 | MTR_1g026800 | 86.585 | 82 | 11 | 0 | 378 | 459 | 235 | 316 | 5.78e-34 | 136 |
| MS.gene32429.t1 | MTR_1g026800 | 85.366 | 82 | 12 | 0 | 337 | 418 | 235 | 316 | 2.71e-33 | 134 |
| MS.gene32429.t1 | MTR_1g026810 | 58.893 | 253 | 74 | 3 | 501 | 724 | 124 | 375 | 7.04e-88 | 282 |
| MS.gene32429.t1 | MTR_1g026810 | 49.138 | 232 | 88 | 3 | 135 | 336 | 3 | 234 | 1.03e-51 | 185 |
| MS.gene32429.t1 | MTR_1g026810 | 58.893 | 253 | 74 | 3 | 501 | 724 | 220 | 471 | 7.23e-87 | 282 |
| MS.gene32429.t1 | MTR_1g026810 | 46.667 | 360 | 132 | 5 | 7 | 336 | 1 | 330 | 1.49e-70 | 239 |
| MS.gene32429.t1 | MTR_1g026810 | 55.720 | 271 | 90 | 3 | 501 | 742 | 220 | 489 | 7.91e-86 | 280 |
| MS.gene32429.t1 | MTR_1g026810 | 46.667 | 360 | 132 | 5 | 7 | 336 | 1 | 330 | 1.57e-70 | 239 |
| MS.gene32429.t1 | MTR_1g026790 | 47.561 | 246 | 93 | 3 | 501 | 723 | 294 | 526 | 7.48e-60 | 212 |
| MS.gene32429.t1 | MTR_1g026790 | 34.509 | 397 | 147 | 14 | 1 | 295 | 1 | 386 | 2.17e-25 | 111 |
| MS.gene32429.t1 | MTR_2g010820 | 51.869 | 214 | 87 | 4 | 515 | 723 | 312 | 514 | 1.88e-52 | 191 |
| MS.gene32429.t1 | MTR_2g010820 | 31.863 | 408 | 217 | 13 | 70 | 459 | 10 | 374 | 1.20e-23 | 106 |
| MS.gene32429.t1 | MTR_1g026790 | 43.496 | 246 | 94 | 4 | 501 | 721 | 294 | 519 | 1.26e-48 | 180 |
| MS.gene32429.t1 | MTR_1g026790 | 34.509 | 397 | 147 | 14 | 1 | 295 | 1 | 386 | 1.43e-25 | 112 |
| MS.gene32429.t1 | MTR_1g026760 | 42.012 | 169 | 75 | 6 | 74 | 230 | 35 | 192 | 2.35e-26 | 107 |
| MS.gene32429.t1 | MTR_1g026760 | 52.174 | 69 | 28 | 1 | 1 | 69 | 35 | 98 | 7.20e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 161 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGGGACTTATACTCTTTC+TGG | 0.148518 | 1.4:-12637863 | None:intergenic |
| CTTATGATGATTCTCAATTT+AGG | 0.202259 | 1.4:+12637805 | MS.gene32429:CDS |
| AGCTATTTGCATGTTGTCTT+TGG | 0.216465 | 1.4:-12637781 | None:intergenic |
| TCAATTTAGGAGAAGACTTT+TGG | 0.247487 | 1.4:+12637818 | MS.gene32429:CDS |
| GCTATTTGCATGTTGTCTTT+GGG | 0.265774 | 1.4:-12637780 | None:intergenic |
| AAAGGGTTAGCTTCACAAAT+TGG | 0.273426 | 1.4:-12637552 | None:intergenic |
| TATGATCATTTATATCTATT+AGG | 0.273707 | 1.4:-12635928 | None:intergenic |
| GCTTTGTGTGTTTAGTGTTT+TGG | 0.285613 | 1.4:+12637744 | MS.gene32429:intron |
| TGCGATGATTTGTGCAAATA+TGG | 0.289953 | 1.4:+12636105 | MS.gene32429:CDS |
| TTCAGATTACGCTACACTTT+TGG | 0.322176 | 1.4:+12636306 | MS.gene32429:CDS |
| TGATCACAGATTGGTTAATC+TGG | 0.329585 | 1.4:+12636498 | MS.gene32429:CDS |
| ATACCAACAATAAAAGAAAA+AGG | 0.344243 | 1.4:+12636002 | MS.gene32429:CDS |
| GTGCTTCAAACTATCACTTC+TGG | 0.346663 | 1.4:-12636053 | None:intergenic |
| TGTCACATAGTTCGATTAGA+AGG | 0.348397 | 1.4:-12637881 | None:intergenic |
| GTCCTTCAAACTATCATTCC+TGG | 0.353240 | 1.4:-12635849 | None:intergenic |
| AGAACAACTGCGATGATTTG+TGG | 0.376289 | 1.4:+12635893 | MS.gene32429:CDS |
| TTATACTCTTTCTGGTCATA+AGG | 0.379944 | 1.4:-12637855 | None:intergenic |
| TTGCAAGAGATTTAATGAAC+TGG | 0.389403 | 1.4:+12639054 | MS.gene32429:CDS |
| CTCCACCTTGGATGTGTTTG+TGG | 0.409533 | 1.4:-12636743 | None:intergenic |
| CTCCACCTTGGATGTGTTTG+TGG | 0.409663 | 1.4:-12637481 | None:intergenic |
| CTCCACCTTGGATGTGTTTG+TGG | 0.411126 | 1.4:-12636620 | None:intergenic |
| CTCCACCTTGGATGTGTTTG+TGG | 0.411126 | 1.4:-12636989 | None:intergenic |
| CTCCACCTTGGATGTGTTTG+TGG | 0.411126 | 1.4:-12637112 | None:intergenic |
| CTCCACCTTGGATGTGTTTG+TGG | 0.411126 | 1.4:-12637358 | None:intergenic |
| AGGATCATATCGAGGCAAAA+AGG | 0.412630 | 1.4:-12636440 | None:intergenic |
| AGCAATGTTTGACAATTCCT+TGG | 0.416312 | 1.4:+12639016 | MS.gene32429:CDS |
| ATAAATGATCATAAGATTGA+TGG | 0.424214 | 1.4:+12635938 | MS.gene32429:CDS |
| CACATCCAAGGTGGAGGATG+GGG | 0.426751 | 1.4:+12637488 | MS.gene32429:CDS |
| GATGAATCATATATATTTGA+AGG | 0.433710 | 1.4:-12637579 | None:intergenic |
| CTAGTTCCTGTGACGATTGT+TGG | 0.436374 | 1.4:+12637057 | MS.gene32429:CDS |
| TGATGACGATGATGATGAAT+TGG | 0.437875 | 1.4:+12636216 | MS.gene32429:CDS |
| GTTCCTGTGACGATTGTTGA+TGG | 0.442668 | 1.4:+12637429 | MS.gene32429:CDS |
| GATTTCAAAACAGTTACATC+TGG | 0.444085 | 1.4:-12637525 | None:intergenic |
| GTGCTCCTTAGCAATAGCTT+TGG | 0.447833 | 1.4:-12638764 | None:intergenic |
| TCACCGTCAACAATCGTCAT+AGG | 0.452257 | 1.4:-12636694 | None:intergenic |
| TTATAAAATTATTGCTTCAA+AGG | 0.456040 | 1.4:-12639083 | None:intergenic |
| GACGATTGTTGACGGTGATA+AGG | 0.462535 | 1.4:+12636699 | MS.gene32429:CDS |
| TCATCAGTATGAGAGTCATC+CGG | 0.465141 | 1.4:-12635785 | None:intergenic |
| CACATCCAAGGTGGAGGGTA+GGG | 0.467862 | 1.4:+12636873 | MS.gene32429:CDS |
| CACATCCAAGGTGGAGGGTA+GGG | 0.467862 | 1.4:+12637242 | MS.gene32429:CDS |
| TATTAAGAAGACGGAAGGCC+AGG | 0.468796 | 1.4:+12635831 | MS.gene32429:CDS |
| CTATTTGCATGTTGTCTTTG+GGG | 0.475255 | 1.4:-12637779 | None:intergenic |
| ACACATCCAAGGTGGAGGAT+GGG | 0.479380 | 1.4:+12637487 | MS.gene32429:CDS |
| CTCCACCTTGGATGTGTTCG+TGG | 0.481844 | 1.4:-12636866 | None:intergenic |
| CTCCACCTTGGATGTGTTCG+TGG | 0.481844 | 1.4:-12637235 | None:intergenic |
| ATCTGAATCCACTTCATCAC+TGG | 0.486709 | 1.4:-12636290 | None:intergenic |
| ATTAAATCTCTTGCAATCGC+AGG | 0.497988 | 1.4:-12639047 | None:intergenic |
| AACACATCCAAGGTGGAGGA+TGG | 0.510664 | 1.4:+12637486 | MS.gene32429:CDS |
| GTTCCTATGACGATTGTTGA+CGG | 0.514132 | 1.4:+12636691 | MS.gene32429:CDS |
| GACGATTGTTGGTGGTGATA+AGG | 0.514683 | 1.4:+12637068 | MS.gene32429:CDS |
| TGCAAGAGATTTAATGAACT+GGG | 0.516553 | 1.4:+12639055 | MS.gene32429:CDS |
| CATCAGTATGAGAGTCATCC+GGG | 0.518594 | 1.4:-12635784 | None:intergenic |
| TGCTTTAATCATGCTTAACC+CGG | 0.522332 | 1.4:+12635766 | MS.gene32429:CDS |
| TATATATTTGAAGGAACGAA+AGG | 0.532917 | 1.4:-12637570 | None:intergenic |
| GATCACAGATTGGTTAATCT+GGG | 0.534584 | 1.4:+12636499 | MS.gene32429:CDS |
| GACGATTGTTGACGGTGATA+AGG | 0.535998 | 1.4:+12636945 | MS.gene32429:CDS |
| GACGATTGTTGACGGTGATA+AGG | 0.535998 | 1.4:+12637191 | MS.gene32429:CDS |
| GACGATTGTTGACGGTGATA+AGG | 0.535998 | 1.4:+12637314 | MS.gene32429:CDS |
| GCCAATACGAAACATGGAAG+GGG | 0.536320 | 1.4:+12637919 | MS.gene32429:CDS |
| GGCCAGGAATGATAGTTTGA+AGG | 0.540132 | 1.4:+12635847 | MS.gene32429:CDS |
| GTCACATAGTTCGATTAGAA+GGG | 0.541022 | 1.4:-12637880 | None:intergenic |
| CAAAACAGTTACATCTGGAT+CGG | 0.549149 | 1.4:-12637520 | None:intergenic |
| GTTCCTGTGACGATTGTTGA+CGG | 0.551067 | 1.4:+12636937 | MS.gene32429:CDS |
| GTTCCTGTGACGATTGTTGA+CGG | 0.551067 | 1.4:+12637183 | MS.gene32429:CDS |
| GTTCCTGTGACGATTGTTGA+CGG | 0.551067 | 1.4:+12637306 | MS.gene32429:CDS |
| GACGATTGTTGATGGTGATA+AGG | 0.554038 | 1.4:+12637437 | MS.gene32429:CDS |
| GATGATTGTTGACGGTGATA+AGG | 0.554365 | 1.4:+12636822 | MS.gene32429:CDS |
| CCAGGGTACAATACATGATA+CGG | 0.560803 | 1.4:-12637978 | None:intergenic |
| TGACTCCCTACCCTCCACCT+TGG | 0.563932 | 1.4:-12636878 | None:intergenic |
| TGACTCCCTACCCTCCACCT+TGG | 0.563932 | 1.4:-12637247 | None:intergenic |
| CACGAACACATCCAAGGTGG+AGG | 0.564556 | 1.4:+12636867 | MS.gene32429:CDS |
| CACGAACACATCCAAGGTGG+AGG | 0.564556 | 1.4:+12637236 | MS.gene32429:CDS |
| GTTCCTGTGATGATTGTTGA+CGG | 0.565416 | 1.4:+12636814 | MS.gene32429:CDS |
| TACAAAGGCTATTAAGAAGA+CGG | 0.573603 | 1.4:+12635822 | MS.gene32429:CDS |
| TTAAATCTCTTGCAATCGCA+GGG | 0.575064 | 1.4:-12639046 | None:intergenic |
| CACAAACACATCCAAGGTGG+AGG | 0.575903 | 1.4:+12636621 | MS.gene32429:CDS |
| CACAAACACATCCAAGGTGG+AGG | 0.575903 | 1.4:+12636744 | MS.gene32429:CDS |
| CACAAACACATCCAAGGTGG+AGG | 0.575903 | 1.4:+12636990 | MS.gene32429:CDS |
| CACAAACACATCCAAGGTGG+AGG | 0.575903 | 1.4:+12637113 | MS.gene32429:CDS |
| CACAAACACATCCAAGGTGG+AGG | 0.575903 | 1.4:+12637359 | MS.gene32429:CDS |
| ATATATTTGAAGGAACGAAA+GGG | 0.577953 | 1.4:-12637569 | None:intergenic |
| GACGATTGTTGATCGTGATA+AGG | 0.581436 | 1.4:+12636576 | MS.gene32429:CDS |
| ACACATCCAAGGTGGAGGGT+AGG | 0.581454 | 1.4:+12636872 | MS.gene32429:CDS |
| ACACATCCAAGGTGGAGGGT+AGG | 0.581454 | 1.4:+12637241 | MS.gene32429:CDS |
| AACAGTTACATCTGGATCGG+AGG | 0.584068 | 1.4:-12637517 | None:intergenic |
| AAATGAAGATGATCACAGAT+TGG | 0.585753 | 1.4:+12636489 | MS.gene32429:CDS |
| TATCAATGACAATCATCAAG+TGG | 0.587633 | 1.4:+12636402 | MS.gene32429:CDS |
| GTTCCTGTGACGATTGTTGG+TGG | 0.590736 | 1.4:+12637060 | MS.gene32429:CDS |
| TCTATCCAAAGCTATTGCTA+AGG | 0.590759 | 1.4:+12638759 | MS.gene32429:CDS |
| CGACTCACTACCCTCCACCT+TGG | 0.594822 | 1.4:-12636632 | None:intergenic |
| AATCGCAGGGTTCAAATCCA+AGG | 0.595614 | 1.4:-12639033 | None:intergenic |
| ACAGTTACATCTGGATCGGA+GGG | 0.595932 | 1.4:-12637516 | None:intergenic |
| ACGCCAATACGAAACATGGA+AGG | 0.596682 | 1.4:+12637917 | MS.gene32429:CDS |
| TGGAACGCCAATACGAAACA+TGG | 0.598072 | 1.4:+12637913 | MS.gene32429:CDS |
| GCACTGTCAAATTCAACAGT+AGG | 0.599364 | 1.4:-12636340 | None:intergenic |
| TCACGATCAACAATCGTCAC+AGG | 0.605235 | 1.4:-12636571 | None:intergenic |
| TCACCATCAACAATCGTCAC+AGG | 0.605235 | 1.4:-12637432 | None:intergenic |
| ACATCCAAGGTGGAGGATGG+GGG | 0.608240 | 1.4:+12637489 | MS.gene32429:CDS |
| TCACCGTCAACAATCGTCAC+AGG | 0.613571 | 1.4:-12636940 | None:intergenic |
| TCACCACCAACAATCGTCAC+AGG | 0.613571 | 1.4:-12637063 | None:intergenic |
| TCACCGTCAACAATCGTCAC+AGG | 0.613571 | 1.4:-12637186 | None:intergenic |
| TCACCGTCAACAATCGTCAC+AGG | 0.613571 | 1.4:-12637309 | None:intergenic |
| TCACCGTCAACAATCATCAC+AGG | 0.615205 | 1.4:-12636817 | None:intergenic |
| CACAAACACATCCAAGGTGG+AGG | 0.617727 | 1.4:+12637482 | MS.gene32429:CDS |
| AGGAGCACAAGAATAAGCGT+AGG | 0.618087 | 1.4:+12638779 | MS.gene32429:CDS |
| TGACTCACTACCCTCCACCT+TGG | 0.620210 | 1.4:-12636755 | None:intergenic |
| TGACTCACTACCCTCCACCT+TGG | 0.620210 | 1.4:-12637001 | None:intergenic |
| TGACTCACTACCCTCCACCT+TGG | 0.620210 | 1.4:-12637124 | None:intergenic |
| TGACTCACTACCCTCCACCT+TGG | 0.620210 | 1.4:-12637370 | None:intergenic |
| CGCCAATACGAAACATGGAA+GGG | 0.626490 | 1.4:+12637918 | MS.gene32429:CDS |
| ATACTGATGATAAAACAGAA+AGG | 0.628327 | 1.4:+12635798 | MS.gene32429:CDS |
| GAATACCACAAACACATCCA+AGG | 0.629121 | 1.4:+12636615 | MS.gene32429:CDS |
| GAATACCACAAACACATCCA+AGG | 0.629121 | 1.4:+12636984 | MS.gene32429:CDS |
| GAATACCACAAACACATCCA+AGG | 0.629121 | 1.4:+12637107 | MS.gene32429:CDS |
| GAATACCACAAACACATCCA+AGG | 0.629121 | 1.4:+12637353 | MS.gene32429:CDS |
| GAATACCACAAACACATCCA+AGG | 0.629121 | 1.4:+12637476 | MS.gene32429:CDS |
| AAGGCTATTAAGAAGACGGA+AGG | 0.630428 | 1.4:+12635826 | MS.gene32429:CDS |
| ACAAACACATCCAAGGTGGA+GGG | 0.632692 | 1.4:+12636622 | MS.gene32429:CDS |
| ACGAACACATCCAAGGTGGA+GGG | 0.632692 | 1.4:+12636868 | MS.gene32429:CDS |
| ACAAACACATCCAAGGTGGA+GGG | 0.632692 | 1.4:+12636991 | MS.gene32429:CDS |
| ACAAACACATCCAAGGTGGA+GGG | 0.632692 | 1.4:+12637114 | MS.gene32429:CDS |
| ACGAACACATCCAAGGTGGA+GGG | 0.632692 | 1.4:+12637237 | MS.gene32429:CDS |
| ACAAACACATCCAAGGTGGA+GGG | 0.632692 | 1.4:+12637360 | MS.gene32429:CDS |
| ATAAAACAGAAAGGTTACAA+AGG | 0.641109 | 1.4:+12635807 | MS.gene32429:CDS |
| GGAGCACAAGAATAAGCGTA+GGG | 0.642841 | 1.4:+12638780 | MS.gene32429:CDS |
| GTGGAGGGTAGTGAGTCGCT+AGG | 0.644159 | 1.4:+12636637 | MS.gene32429:CDS |
| CCGTATCATGTATTGTACCC+TGG | 0.646377 | 1.4:+12637978 | MS.gene32429:CDS |
| GAATTCCACAAACACATCCA+AGG | 0.648287 | 1.4:+12636738 | MS.gene32429:CDS |
| GAATACCACGAACACATCCA+AGG | 0.648592 | 1.4:+12636861 | MS.gene32429:CDS |
| GAATACCACGAACACATCCA+AGG | 0.648592 | 1.4:+12637230 | MS.gene32429:CDS |
| GTGGAGGGTAGGGAGTCACT+AGG | 0.653627 | 1.4:+12636883 | MS.gene32429:CDS |
| GTGGAGGGTAGGGAGTCACT+AGG | 0.653627 | 1.4:+12637252 | MS.gene32429:CDS |
| ACATCATCGCTAATATGACC+AGG | 0.654247 | 1.4:-12636460 | None:intergenic |
| ACAAACACATCCAAGGTGGA+GGG | 0.659544 | 1.4:+12636745 | MS.gene32429:CDS |
| GGTCATATTAGCGATGATGT+TGG | 0.671445 | 1.4:+12636463 | MS.gene32429:CDS |
| AAGGCTATCAAGAAGACAGG+AGG | 0.672323 | 1.4:+12636030 | MS.gene32429:CDS |
| GTGGAGGGTAGTGAGTCACT+AGG | 0.679528 | 1.4:+12636760 | MS.gene32429:CDS |
| GTGGAGGGTAGTGAGTCACT+AGG | 0.679528 | 1.4:+12637006 | MS.gene32429:CDS |
| GTGGAGGGTAGTGAGTCACT+AGG | 0.679528 | 1.4:+12637129 | MS.gene32429:CDS |
| GTGGAGGGTAGTGAGTCACT+AGG | 0.679528 | 1.4:+12637375 | MS.gene32429:CDS |
| GGTGATAAGGAGTATATGCG+TGG | 0.687012 | 1.4:+12636712 | MS.gene32429:CDS |
| GGTGATAAGGAGTATATGCG+TGG | 0.687012 | 1.4:+12636835 | MS.gene32429:CDS |
| GGTGATAAGGAGTATATGCG+TGG | 0.687012 | 1.4:+12637204 | MS.gene32429:CDS |
| CCAATACGAAACATGGAAGG+GGG | 0.690311 | 1.4:+12637920 | MS.gene32429:CDS |
| ATATGACCAGGATCATATCG+AGG | 0.702493 | 1.4:-12636448 | None:intergenic |
| TTCCACAAACACATCCAAGG+TGG | 0.704424 | 1.4:+12636741 | MS.gene32429:CDS |
| TACCACAAACACATCCAAGG+TGG | 0.705342 | 1.4:+12636618 | MS.gene32429:CDS |
| TACCACAAACACATCCAAGG+TGG | 0.705342 | 1.4:+12636987 | MS.gene32429:CDS |
| TACCACAAACACATCCAAGG+TGG | 0.705342 | 1.4:+12637110 | MS.gene32429:CDS |
| TACCACAAACACATCCAAGG+TGG | 0.705342 | 1.4:+12637356 | MS.gene32429:CDS |
| TACCACAAACACATCCAAGG+TGG | 0.705342 | 1.4:+12637479 | MS.gene32429:CDS |
| TTTGAATCATATGACACTGA+AGG | 0.718222 | 1.4:+12637945 | MS.gene32429:CDS |
| TACCACGAACACATCCAAGG+TGG | 0.721036 | 1.4:+12636864 | MS.gene32429:CDS |
| TACCACGAACACATCCAAGG+TGG | 0.721036 | 1.4:+12637233 | MS.gene32429:CDS |
| GACAGTGCTAGTAATCGTCG+CGG | 0.728262 | 1.4:+12636355 | MS.gene32429:CDS |
| GGTGATAAGGAGTATGTGTG+TGG | 0.733498 | 1.4:+12636958 | MS.gene32429:CDS |
| GGTGATAAGGAGTTTGTGTG+TGG | 0.733498 | 1.4:+12637327 | MS.gene32429:CDS |
| GGTGATAAGGAGTATATGCG+TGG | 0.735259 | 1.4:+12637450 | MS.gene32429:CDS |
| AATCTGGGAAGTGAGTCACT+AGG | 0.740246 | 1.4:+12636514 | MS.gene32429:CDS |
| CGTGATAAGGAGTATGTGCG+TGG | 0.740725 | 1.4:+12636589 | MS.gene32429:CDS |
| GGTGATAAGGAGTATATGCG+TGG | 0.748740 | 1.4:+12637081 | MS.gene32429:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAGTAATATTTTTCAAA+TGG | + | chr1.4:12637633-12637652 | MS.gene32429:intron | 10.0% |
| !! | ATAAAAGAAAAAGGTTAAAA+AGG | + | chr1.4:12636011-12636030 | MS.gene32429:CDS | 15.0% |
| !! | TATGATCATTTATATCTATT+AGG | - | chr1.4:12635931-12635950 | None:intergenic | 15.0% |
| !!! | TGTTTGTTAAAATTATAAAC+TGG | + | chr1.4:12638291-12638310 | MS.gene32429:intron | 15.0% |
| !! | AAAGAATAAAAAGGATCATA+CGG | + | chr1.4:12636135-12636154 | MS.gene32429:CDS | 20.0% |
| !! | AATATGCAATCAAAATTCAA+TGG | + | chr1.4:12638076-12638095 | MS.gene32429:intron | 20.0% |
| !! | AATATTCTTCATACACATTA+AGG | - | chr1.4:12638887-12638906 | None:intergenic | 20.0% |
| !! | ATAAATGATCATAAGATTGA+TGG | + | chr1.4:12635938-12635957 | MS.gene32429:CDS | 20.0% |
| !! | ATACCAACAATAAAAGAAAA+AGG | + | chr1.4:12636002-12636021 | MS.gene32429:CDS | 20.0% |
| !! | GATGAATCATATATATTTGA+AGG | - | chr1.4:12637582-12637601 | None:intergenic | 20.0% |
| !! | TAAAGTCTGTAAAAAAAAGT+TGG | + | chr1.4:12636174-12636193 | MS.gene32429:CDS | 20.0% |
| !! | TCAAAACAAATATTTGATAG+AGG | - | chr1.4:12638724-12638743 | None:intergenic | 20.0% |
| !! | TCTGTCTATATTATAATTTG+TGG | + | chr1.4:12638604-12638623 | MS.gene32429:intron | 20.0% |
| !! | TTAGAACAATTGAGAAAATA+TGG | - | chr1.4:12638009-12638028 | None:intergenic | 20.0% |
| !!! | CTGTGTTAAATTTTAATGTT+GGG | + | chr1.4:12638319-12638338 | MS.gene32429:intron | 20.0% |
| !!! | GGATGTTTTAAAGAATAAAA+AGG | + | chr1.4:12636126-12636145 | MS.gene32429:CDS | 20.0% |
| !!! | GTATTTTCATCATATTTTGA+TGG | + | chr1.4:12638261-12638280 | MS.gene32429:intron | 20.0% |
| !!! | TAACCTTTTTCTTTTATTGT+TGG | - | chr1.4:12636008-12636027 | None:intergenic | 20.0% |
| !!! | TCTGTGTTAAATTTTAATGT+TGG | + | chr1.4:12638318-12638337 | MS.gene32429:intron | 20.0% |
| !!! | TGAATTTTGATTGCATATTT+AGG | - | chr1.4:12638075-12638094 | None:intergenic | 20.0% |
| !!! | TGTGTTAAATTTTAATGTTG+GGG | + | chr1.4:12638320-12638339 | MS.gene32429:intron | 20.0% |
| !!! | TTTCTTTTATTGTTGGTATT+AGG | - | chr1.4:12636001-12636020 | None:intergenic | 20.0% |
| ! | ATAAAACAGAAAGGTTACAA+AGG | + | chr1.4:12635807-12635826 | MS.gene32429:CDS | 25.0% |
| ! | ATACTGATGATAAAACAGAA+AGG | + | chr1.4:12635798-12635817 | MS.gene32429:CDS | 25.0% |
| ! | ATATATTTGAAGGAACGAAA+GGG | - | chr1.4:12637572-12637591 | None:intergenic | 25.0% |
| ! | CTTATGATGATTCTCAATTT+AGG | + | chr1.4:12637805-12637824 | MS.gene32429:CDS | 25.0% |
| ! | TATATATTTGAAGGAACGAA+AGG | - | chr1.4:12637573-12637592 | None:intergenic | 25.0% |
| ! | TGATGAAAATACAAATCAAC+AGG | - | chr1.4:12638253-12638272 | None:intergenic | 25.0% |
| ! | TTGTTGAATAATGTGCATAT+TGG | - | chr1.4:12637663-12637682 | None:intergenic | 25.0% |
| ! | TTTATTTAATGCTAGTAGTG+AGG | - | chr1.4:12638114-12638133 | None:intergenic | 25.0% |
| !! | AAAAAAGTTGGCTTCATATA+CGG | + | chr1.4:12636186-12636205 | MS.gene32429:CDS | 25.0% |
| !! | CATATGATTCAACTATGTTT+TGG | - | chr1.4:12638169-12638188 | None:intergenic | 25.0% |
| !! | GAATCATATGATTTAAGATG+AGG | + | chr1.4:12638179-12638198 | MS.gene32429:intron | 25.0% |
| !!! | GTGTTAAATTTTAATGTTGG+GGG | + | chr1.4:12638321-12638340 | MS.gene32429:intron | 25.0% |
| !!! | GTTAATTTGTGCAAGTTTTT+TGG | + | chr1.4:12638626-12638645 | MS.gene32429:intron | 25.0% |
| !!! | TGTTAAATTTTAATGTTGGG+GGG | + | chr1.4:12638322-12638341 | MS.gene32429:intron | 25.0% |
| AAATGAAGATGATCACAGAT+TGG | + | chr1.4:12636489-12636508 | MS.gene32429:CDS | 30.0% | |
| AAGCAATGATTTGATAGGAA+AGG | + | chr1.4:12638917-12638936 | MS.gene32429:intron | 30.0% | |
| AGCAATGATTTGATAGGAAA+GGG | + | chr1.4:12638918-12638937 | MS.gene32429:intron | 30.0% | |
| ATCTGAATATATGACTGACT+AGG | + | chr1.4:12638446-12638465 | MS.gene32429:intron | 30.0% | |
| GATTTCAAAACAGTTACATC+TGG | - | chr1.4:12637528-12637547 | None:intergenic | 30.0% | |
| GCAAACTACATTTATTCATG+AGG | - | chr1.4:12638397-12638416 | None:intergenic | 30.0% | |
| TACAAAGGCTATTAAGAAGA+CGG | + | chr1.4:12635822-12635841 | MS.gene32429:CDS | 30.0% | |
| TATATGCTCAATCTGATTTC+TGG | + | chr1.4:12638698-12638717 | MS.gene32429:intron | 30.0% | |
| TATCAATGACAATCATCAAG+TGG | + | chr1.4:12636402-12636421 | MS.gene32429:CDS | 30.0% | |
| TGATTACTAATCATCACTGT+AGG | + | chr1.4:12638551-12638570 | MS.gene32429:intron | 30.0% | |
| TGCAAGAGATTTAATGAACT+GGG | + | chr1.4:12639055-12639074 | MS.gene32429:CDS | 30.0% | |
| TTGCAAGAGATTTAATGAAC+TGG | + | chr1.4:12639054-12639073 | MS.gene32429:CDS | 30.0% | |
| TTTGAATCATATGACACTGA+AGG | + | chr1.4:12637945-12637964 | MS.gene32429:CDS | 30.0% | |
| ! | AAAAAGTTGGCTTCATATAC+GGG | + | chr1.4:12636187-12636206 | MS.gene32429:CDS | 30.0% |
| ! | TATGATTTAAGATGAGGAGA+AGG | + | chr1.4:12638185-12638204 | MS.gene32429:intron | 30.0% |
| ! | TCAATTTAGGAGAAGACTTT+TGG | + | chr1.4:12637818-12637837 | MS.gene32429:CDS | 30.0% |
| ! | TTATACTCTTTCTGGTCATA+AGG | - | chr1.4:12637858-12637877 | None:intergenic | 30.0% |
| !!! | AGTTTTTTGGTAGCTTCTAT+TGG | + | chr1.4:12638639-12638658 | MS.gene32429:intron | 30.0% |
| !!! | TGATTCAACTATGTTTTGGT+TGG | - | chr1.4:12638165-12638184 | None:intergenic | 30.0% |
| AAAAAGGCTATCAAGAAGAC+AGG | + | chr1.4:12636027-12636046 | MS.gene32429:CDS | 35.0% | |
| AATCAACAGGAGATAGTTTC+AGG | - | chr1.4:12638240-12638259 | None:intergenic | 35.0% | |
| ACTATGTGACAAAAAGCAAC+TGG | + | chr1.4:12637893-12637912 | MS.gene32429:CDS | 35.0% | |
| AGCAATGTTTGACAATTCCT+TGG | + | chr1.4:12639016-12639035 | MS.gene32429:CDS | 35.0% | |
| AGCTATTTGCATGTTGTCTT+TGG | - | chr1.4:12637784-12637803 | None:intergenic | 35.0% | |
| ATTAAATCTCTTGCAATCGC+AGG | - | chr1.4:12639050-12639069 | None:intergenic | 35.0% | |
| CAAAACAGTTACATCTGGAT+CGG | - | chr1.4:12637523-12637542 | None:intergenic | 35.0% | |
| CAATGATTTGATAGGAAAGG+GGG | + | chr1.4:12638920-12638939 | MS.gene32429:intron | 35.0% | |
| CTATTTGCATGTTGTCTTTG+GGG | - | chr1.4:12637782-12637801 | None:intergenic | 35.0% | |
| CTCAATTGTTCTAACTTCTC+AGG | + | chr1.4:12638015-12638034 | MS.gene32429:intron | 35.0% | |
| GCAATGATTTGATAGGAAAG+GGG | + | chr1.4:12638919-12638938 | MS.gene32429:intron | 35.0% | |
| GCTATTTGCATGTTGTCTTT+GGG | - | chr1.4:12637783-12637802 | None:intergenic | 35.0% | |
| GTCACATAGTTCGATTAGAA+GGG | - | chr1.4:12637883-12637902 | None:intergenic | 35.0% | |
| TACTAATCATCACTGTAGGT+TGG | + | chr1.4:12638555-12638574 | MS.gene32429:intron | 35.0% | |
| TCGTATGGTAGCATAAAGTT+TGG | + | chr1.4:12638048-12638067 | MS.gene32429:intron | 35.0% | |
| TCTACATTACTCTGATGCAT+TGG | - | chr1.4:12638373-12638392 | None:intergenic | 35.0% | |
| TCTATCCAAAGCTATTGCTA+AGG | + | chr1.4:12638759-12638778 | MS.gene32429:CDS | 35.0% | |
| TGCTGAAGCAATGATTTGAT+AGG | + | chr1.4:12638912-12638931 | MS.gene32429:intron | 35.0% | |
| TGCTTTAATCATGCTTAACC+CGG | + | chr1.4:12635766-12635785 | MS.gene32429:CDS | 35.0% | |
| TGTCACATAGTTCGATTAGA+AGG | - | chr1.4:12637884-12637903 | None:intergenic | 35.0% | |
| TTAAATCTCTTGCAATCGCA+GGG | - | chr1.4:12639049-12639068 | None:intergenic | 35.0% | |
| TTATGCTACCATACGAAAGA+AGG | - | chr1.4:12638044-12638063 | None:intergenic | 35.0% | |
| ! | CTTTGATTTCTCTGTAGTCA+AGG | + | chr1.4:12638478-12638497 | MS.gene32429:intron | 35.0% |
| ! | GATCACAGATTGGTTAATCT+GGG | + | chr1.4:12636499-12636518 | MS.gene32429:CDS | 35.0% |
| ! | GCTTTGTGTGTTTAGTGTTT+TGG | + | chr1.4:12637744-12637763 | MS.gene32429:intron | 35.0% |
| ! | TGATCACAGATTGGTTAATC+TGG | + | chr1.4:12636498-12636517 | MS.gene32429:CDS | 35.0% |
| ! | TGATGACGATGATGATGAAT+TGG | + | chr1.4:12636216-12636235 | MS.gene32429:CDS | 35.0% |
| ! | TGCGATGATTTGTGCAAATA+TGG | + | chr1.4:12636105-12636124 | MS.gene32429:CDS | 35.0% |
| ! | TTCAGATTACGCTACACTTT+TGG | + | chr1.4:12636306-12636325 | MS.gene32429:CDS | 35.0% |
| ! | TTCATGCTACCTTTTAAGCA+CGG | + | chr1.4:12638504-12638523 | MS.gene32429:intron | 35.0% |
| !! | AAAGGGTTAGCTTCACAAAT+TGG | - | chr1.4:12637555-12637574 | None:intergenic | 35.0% |
| !! | ATTACTCTGATGCATTGGTT+TGG | - | chr1.4:12638368-12638387 | None:intergenic | 35.0% |
| !! | TCACTGGTGTTTTTGTTATC+AGG | - | chr1.4:12636277-12636296 | None:intergenic | 35.0% |
| !!! | AGAGTTCTTGTTTTGTGAGT+AGG | + | chr1.4:12638955-12638974 | MS.gene32429:intron | 35.0% |
| !!! | TTTTGTGAGTAGGAGGTATT+AGG | + | chr1.4:12638965-12638984 | MS.gene32429:intron | 35.0% |
| AAACCCTCACTTGATGTGTT+GGG | + | chr1.4:12638131-12638150 | MS.gene32429:intron | 40.0% | |
| AAGGCTATTAAGAAGACGGA+AGG | + | chr1.4:12635826-12635845 | MS.gene32429:CDS | 40.0% | |
| ACATCATCGCTAATATGACC+AGG | - | chr1.4:12636463-12636482 | None:intergenic | 40.0% | |
| AGAACAACTGCGATGATTTG+TGG | + | chr1.4:12635893-12635912 | MS.gene32429:CDS | 40.0% | |
| AGGATCATATCGAGGCAAAA+AGG | - | chr1.4:12636443-12636462 | None:intergenic | 40.0% | |
| ATATGACCAGGATCATATCG+AGG | - | chr1.4:12636451-12636470 | None:intergenic | 40.0% | |
| ATCATGTATTGTACCCTGGT+AGG | + | chr1.4:12637982-12638001 | MS.gene32429:intron | 40.0% | |
| ATCTGAATCCACTTCATCAC+TGG | - | chr1.4:12636293-12636312 | None:intergenic | 40.0% | |
| CAAAAACACCAGTGATGAAG+TGG | + | chr1.4:12636282-12636301 | MS.gene32429:CDS | 40.0% | |
| CATATCGAGGCAAAAAGGAT+TGG | - | chr1.4:12636438-12636457 | None:intergenic | 40.0% | |
| CCAGGGTACAATACATGATA+CGG | - | chr1.4:12637981-12638000 | None:intergenic | 40.0% | |
| GAAGGGACTTATACTCTTTC+TGG | - | chr1.4:12637866-12637885 | None:intergenic | 40.0% | |
| GAATACCACAAACACATCCA+AGG | + | chr1.4:12636615-12636634 | MS.gene32429:CDS | 40.0% | |
| GAATTCCACAAACACATCCA+AGG | + | chr1.4:12636738-12636757 | MS.gene32429:CDS | 40.0% | |
| GACGATTGTTGATCGTGATA+AGG | + | chr1.4:12636576-12636595 | MS.gene32429:CDS | 40.0% | |
| GAGAAAATATGGACCTACCA+GGG | - | chr1.4:12637998-12638017 | None:intergenic | 40.0% | |
| GATGATTGTTGACGGTGATA+AGG | + | chr1.4:12636822-12636841 | MS.gene32429:CDS | 40.0% | |
| GCACTGTCAAATTCAACAGT+AGG | - | chr1.4:12636343-12636362 | None:intergenic | 40.0% | |
| GGTCATATTAGCGATGATGT+TGG | + | chr1.4:12636463-12636482 | MS.gene32429:CDS | 40.0% | |
| GTCCTTCAAACTATCATTCC+TGG | - | chr1.4:12635852-12635871 | None:intergenic | 40.0% | |
| GTGCTTCAAACTATCACTTC+TGG | - | chr1.4:12636056-12636075 | None:intergenic | 40.0% | |
| GTTCCTATGACGATTGTTGA+CGG | + | chr1.4:12636691-12636710 | MS.gene32429:CDS | 40.0% | |
| GTTCCTGTGATGATTGTTGA+CGG | + | chr1.4:12636814-12636833 | MS.gene32429:CDS | 40.0% | |
| TAAACCCTCACTTGATGTGT+TGG | + | chr1.4:12638130-12638149 | MS.gene32429:intron | 40.0% | |
| TCAGGTTTCCTTCTTTCGTA+TGG | + | chr1.4:12638033-12638052 | MS.gene32429:intron | 40.0% | |
| TCATCAGTATGAGAGTCATC+CGG | - | chr1.4:12635788-12635807 | None:intergenic | 40.0% | |
| TGAGAAAATATGGACCTACC+AGG | - | chr1.4:12637999-12638018 | None:intergenic | 40.0% | |
| ! | TCATGCTACCTTTTAAGCAC+GGG | + | chr1.4:12638505-12638524 | MS.gene32429:intron | 40.0% |
| ! | TTTTTGCCTCGATATGATCC+TGG | + | chr1.4:12636442-12636461 | MS.gene32429:CDS | 40.0% |
| !! | GACGATTGTTGATGGTGATA+AGG | + | chr1.4:12637437-12637456 | MS.gene32429:CDS | 40.0% |
| !!! | GACTTTTGGAACATCTTGAC+AGG | + | chr1.4:12637832-12637851 | MS.gene32429:CDS | 40.0% |
| !!! | GTTCTTGTTTTGTGAGTAGG+AGG | + | chr1.4:12638958-12638977 | MS.gene32429:intron | 40.0% |
| AACAGTTACATCTGGATCGG+AGG | - | chr1.4:12637520-12637539 | None:intergenic | 45.0% | |
| AAGGCTATCAAGAAGACAGG+AGG | + | chr1.4:12636030-12636049 | MS.gene32429:CDS | 45.0% | |
| AATCGCAGGGTTCAAATCCA+AGG | - | chr1.4:12639036-12639055 | None:intergenic | 45.0% | |
| AATCTGGGAAGTGAGTCACT+AGG | + | chr1.4:12636514-12636533 | MS.gene32429:CDS | 45.0% | |
| ACAAACACATCCAAGGTGGA+GGG | + | chr1.4:12636622-12636641 | MS.gene32429:CDS | 45.0% | |
| ACAGTTACATCTGGATCGGA+GGG | - | chr1.4:12637519-12637538 | None:intergenic | 45.0% | |
| ACGCCAATACGAAACATGGA+AGG | + | chr1.4:12637917-12637936 | MS.gene32429:CDS | 45.0% | |
| AGAATGAGCCCGTGCTTAAA+AGG | - | chr1.4:12638516-12638535 | None:intergenic | 45.0% | |
| CATCAGTATGAGAGTCATCC+GGG | - | chr1.4:12635787-12635806 | None:intergenic | 45.0% | |
| CCAATACGAAACATGGAAGG+GGG | + | chr1.4:12637920-12637939 | MS.gene32429:CDS | 45.0% | |
| CCGTATCATGTATTGTACCC+TGG | + | chr1.4:12637978-12637997 | MS.gene32429:CDS | 45.0% | |
| CGCCAATACGAAACATGGAA+GGG | + | chr1.4:12637918-12637937 | MS.gene32429:CDS | 45.0% | |
| CGTCGCGGTAGTTCAAAAAT+TGG | + | chr1.4:12636370-12636389 | MS.gene32429:CDS | 45.0% | |
| CTAGTTCCTGTGACGATTGT+TGG | + | chr1.4:12636565-12636584 | MS.gene32429:CDS | 45.0% | |
| GAATACCACGAACACATCCA+AGG | + | chr1.4:12636861-12636880 | MS.gene32429:CDS | 45.0% | |
| GACGATTGTTGACGGTGATA+AGG | + | chr1.4:12636699-12636718 | MS.gene32429:CDS | 45.0% | |
| GCCAATACGAAACATGGAAG+GGG | + | chr1.4:12637919-12637938 | MS.gene32429:CDS | 45.0% | |
| GGAGCACAAGAATAAGCGTA+GGG | + | chr1.4:12638780-12638799 | MS.gene32429:CDS | 45.0% | |
| GGCCAGGAATGATAGTTTGA+AGG | + | chr1.4:12635847-12635866 | MS.gene32429:CDS | 45.0% | |
| GGTGATAAGGAGTTTGTGTG+TGG | + | chr1.4:12637327-12637346 | MS.gene32429:CDS | 45.0% | |
| GTGCTCCTTAGCAATAGCTT+TGG | - | chr1.4:12638767-12638786 | None:intergenic | 45.0% | |
| GTTCCTGTGACGATTGTTGA+CGG | + | chr1.4:12636568-12636587 | MS.gene32429:CDS | 45.0% | |
| GTTCCTGTGACGATTGTTGA+TGG | + | chr1.4:12636568-12636587 | MS.gene32429:CDS | 45.0% | |
| TACCACAAACACATCCAAGG+TGG | + | chr1.4:12636618-12636637 | MS.gene32429:CDS | 45.0% | |
| TATTAAGAAGACGGAAGGCC+AGG | + | chr1.4:12635831-12635850 | MS.gene32429:CDS | 45.0% | |
| TCACCATCAACAATCGTCAC+AGG | - | chr1.4:12637435-12637454 | None:intergenic | 45.0% | |
| TCACCGTCAACAATCATCAC+AGG | - | chr1.4:12636820-12636839 | None:intergenic | 45.0% | |
| TCACCGTCAACAATCGTCAT+AGG | - | chr1.4:12636697-12636716 | None:intergenic | 45.0% | |
| TCACGATCAACAATCGTCAC+AGG | - | chr1.4:12636574-12636593 | None:intergenic | 45.0% | |
| TGGAACGCCAATACGAAACA+TGG | + | chr1.4:12637913-12637932 | MS.gene32429:CDS | 45.0% | |
| TTCCACAAACACATCCAAGG+TGG | + | chr1.4:12636741-12636760 | MS.gene32429:CDS | 45.0% | |
| ! | AGGAGCACAAGAATAAGCGT+AGG | + | chr1.4:12638779-12638798 | MS.gene32429:CDS | 45.0% |
| ! | GGTGATAAGGAGTATATGCG+TGG | + | chr1.4:12636712-12636731 | MS.gene32429:CDS | 45.0% |
| ! | GGTGATAAGGAGTATGTGTG+TGG | + | chr1.4:12636958-12636977 | MS.gene32429:CDS | 45.0% |
| !! | GACGATTGTTGGTGGTGATA+AGG | + | chr1.4:12637068-12637087 | MS.gene32429:CDS | 45.0% |
| !!! | AGGGTTTTGTTTCTCTTGCG+TGG | + | chr1.4:12638799-12638818 | MS.gene32429:CDS | 45.0% |
| AACACATCCAAGGTGGAGGA+TGG | + | chr1.4:12637486-12637505 | MS.gene32429:CDS | 50.0% | |
| ACACATCCAAGGTGGAGGAT+GGG | + | chr1.4:12637487-12637506 | MS.gene32429:CDS | 50.0% | |
| ACGAACACATCCAAGGTGGA+GGG | + | chr1.4:12636868-12636887 | MS.gene32429:CDS | 50.0% | |
| CACAAACACATCCAAGGTGG+AGG | + | chr1.4:12636621-12636640 | MS.gene32429:CDS | 50.0% | |
| CCACCCAACACATCAAGTGA+GGG | - | chr1.4:12638137-12638156 | None:intergenic | 50.0% | |
| CCCCCTTCCATGTTTCGTAT+TGG | - | chr1.4:12637923-12637942 | None:intergenic | 50.0% | |
| CCTCACTTGATGTGTTGGGT+GGG | + | chr1.4:12638135-12638154 | MS.gene32429:intron | 50.0% | |
| CTCCACCTTGGATGTGTTTG+TGG | - | chr1.4:12636623-12636642 | None:intergenic | 50.0% | |
| GACAGTGCTAGTAATCGTCG+CGG | + | chr1.4:12636355-12636374 | MS.gene32429:CDS | 50.0% | |
| GTTCCTGTGACGATTGTTGG+TGG | + | chr1.4:12637060-12637079 | MS.gene32429:CDS | 50.0% | |
| TACCACGAACACATCCAAGG+TGG | + | chr1.4:12636864-12636883 | MS.gene32429:CDS | 50.0% | |
| TCACCACCAACAATCGTCAC+AGG | - | chr1.4:12637066-12637085 | None:intergenic | 50.0% | |
| TCACCGTCAACAATCGTCAC+AGG | - | chr1.4:12636943-12636962 | None:intergenic | 50.0% | |
| ! | CGTGATAAGGAGTATGTGCG+TGG | + | chr1.4:12636589-12636608 | MS.gene32429:CDS | 50.0% |
| ACACATCCAAGGTGGAGGGT+AGG | + | chr1.4:12636626-12636645 | MS.gene32429:CDS | 55.0% | |
| ACATCCAAGGTGGAGGATGG+GGG | + | chr1.4:12637489-12637508 | MS.gene32429:CDS | 55.0% | |
| ATTACCCCCATCCTCCACCT+TGG | - | chr1.4:12637496-12637515 | None:intergenic | 55.0% | |
| CACATCCAAGGTGGAGGATG+GGG | + | chr1.4:12637488-12637507 | MS.gene32429:CDS | 55.0% | |
| CACATCCAAGGTGGAGGGTA+GGG | + | chr1.4:12636627-12636646 | MS.gene32429:CDS | 55.0% | |
| CACGAACACATCCAAGGTGG+AGG | + | chr1.4:12636867-12636886 | MS.gene32429:CDS | 55.0% | |
| CACTTGATGTGTTGGGTGGG+TGG | + | chr1.4:12638138-12638157 | MS.gene32429:intron | 55.0% | |
| CCCACCCAACACATCAAGTG+AGG | - | chr1.4:12638138-12638157 | None:intergenic | 55.0% | |
| CCCTCACTTGATGTGTTGGG+TGG | + | chr1.4:12638134-12638153 | MS.gene32429:intron | 55.0% | |
| CTCCACCTTGGATGTGTTCG+TGG | - | chr1.4:12636869-12636888 | None:intergenic | 55.0% | |
| GTGGAGGGTAGTGAGTCACT+AGG | + | chr1.4:12636760-12636779 | MS.gene32429:CDS | 55.0% | |
| TGACTCACTACCCTCCACCT+TGG | - | chr1.4:12636758-12636777 | None:intergenic | 55.0% | |
| CGACTCACTACCCTCCACCT+TGG | - | chr1.4:12636635-12636654 | None:intergenic | 60.0% | |
| GTGGAGGGTAGGGAGTCACT+AGG | + | chr1.4:12636883-12636902 | MS.gene32429:CDS | 60.0% | |
| GTGGAGGGTAGTGAGTCGCT+AGG | + | chr1.4:12636637-12636656 | MS.gene32429:CDS | 60.0% | |
| TGACTCCCTACCCTCCACCT+TGG | - | chr1.4:12636881-12636900 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 12635758 | 12639097 | 12635758 | ID=MS.gene32429 |
| chr1.4 | mRNA | 12635758 | 12639097 | 12635758 | ID=MS.gene32429.t1;Parent=MS.gene32429 |
| chr1.4 | exon | 12635758 | 12637602 | 12635758 | ID=MS.gene32429.t1.exon1;Parent=MS.gene32429.t1 |
| chr1.4 | CDS | 12635758 | 12637602 | 12635758 | ID=cds.MS.gene32429.t1;Parent=MS.gene32429.t1 |
| chr1.4 | exon | 12637759 | 12637999 | 12637759 | ID=MS.gene32429.t1.exon2;Parent=MS.gene32429.t1 |
| chr1.4 | CDS | 12637759 | 12637999 | 12637759 | ID=cds.MS.gene32429.t1;Parent=MS.gene32429.t1 |
| chr1.4 | exon | 12638758 | 12638840 | 12638758 | ID=MS.gene32429.t1.exon3;Parent=MS.gene32429.t1 |
| chr1.4 | CDS | 12638758 | 12638840 | 12638758 | ID=cds.MS.gene32429.t1;Parent=MS.gene32429.t1 |
| chr1.4 | exon | 12638987 | 12639097 | 12638987 | ID=MS.gene32429.t1.exon4;Parent=MS.gene32429.t1 |
| chr1.4 | CDS | 12638987 | 12639097 | 12638987 | ID=cds.MS.gene32429.t1;Parent=MS.gene32429.t1 |
| Gene Sequence |
| Protein sequence |
