Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32744.t1 | RHN70529.1 | 97.5 | 529 | 12 | 1 | 1 | 529 | 1 | 528 | 4.00E-294 | 1020 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32744.t1 | A0A396IXU4 | 97.5 | 529 | 12 | 1 | 1 | 529 | 1 | 528 | 2.9e-294 | 1020.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050787 | MS.gene32744 | 0.821507 | 3.89E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene32744 | 0.805574 | 1.25E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene32744 | 0.813838 | 2.09E-51 | -1.69E-46 |
| MS.gene054473 | MS.gene32744 | 0.846281 | 2.40E-59 | -1.69E-46 |
| MS.gene055356 | MS.gene32744 | 0.8051 | 1.57E-49 | -1.69E-46 |
| MS.gene055358 | MS.gene32744 | 0.826632 | 2.44E-54 | -1.69E-46 |
| MS.gene055804 | MS.gene32744 | 0.80388 | 2.82E-49 | -1.69E-46 |
| MS.gene057469 | MS.gene32744 | 0.832757 | 7.88E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32744.t1 | MTR_3g105400 | 97.692 | 520 | 12 | 0 | 1 | 520 | 1 | 520 | 0.0 | 1059 |
| MS.gene32744.t1 | MTR_3g105400 | 97.313 | 521 | 13 | 1 | 1 | 520 | 1 | 521 | 0.0 | 1051 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32744.t1 | AT2G26270 | 54.749 | 537 | 222 | 9 | 1 | 529 | 1 | 524 | 0.0 | 545 |
| MS.gene32744.t1 | AT3G43930 | 47.426 | 544 | 229 | 11 | 1 | 529 | 1 | 502 | 7.47e-159 | 462 |
| MS.gene32744.t1 | AT3G43930 | 46.414 | 474 | 206 | 10 | 1 | 462 | 1 | 438 | 5.20e-133 | 394 |
| MS.gene32744.t1 | AT3G43930 | 45.638 | 298 | 134 | 5 | 1 | 287 | 1 | 281 | 1.50e-79 | 252 |
Find 118 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTATAGTTTGAAGAATTA+TGG | 0.150732 | 3.1:-83227148 | MS.gene32744:CDS |
| GATGAGTATGCTTGATTTCA+TGG | 0.230447 | 3.1:+83227047 | None:intergenic |
| CTGATGCTTGATGACATTTC+AGG | 0.260903 | 3.1:-83226322 | MS.gene32744:CDS |
| CAGGGCAGTAAAAGTGAAAT+TGG | 0.280733 | 3.1:-83226098 | MS.gene32744:CDS |
| GATAGAGTCCAGAAGGTTAT+TGG | 0.281598 | 3.1:+83225627 | None:intergenic |
| TGCCAAACTAGCACCTTCTT+TGG | 0.298759 | 3.1:+83226763 | None:intergenic |
| GAGAACAACCTTTCTGTTAG+AGG | 0.306209 | 3.1:+83225454 | None:intergenic |
| AAAAGTCCATGACGATCTTC+AGG | 0.319631 | 3.1:-83226117 | MS.gene32744:CDS |
| TGTTAGCATGTCTGTTGATT+TGG | 0.329381 | 3.1:-83226359 | MS.gene32744:CDS |
| TTTATAGTTTGAAGAATTAT+GGG | 0.341154 | 3.1:-83227147 | MS.gene32744:CDS |
| GGAAGAGTATGGTGAGAAAA+TGG | 0.345135 | 3.1:+83225329 | None:intergenic |
| TTTAACATATAGCACAGTTT+TGG | 0.346095 | 3.1:-83227462 | MS.gene32744:intron |
| CTCTATCTGTTGGTCAATAT+CGG | 0.352911 | 3.1:-83225611 | MS.gene32744:CDS |
| TTGATTTCATGGATTCTTGC+AGG | 0.362130 | 3.1:+83227058 | None:intergenic |
| GATGCAGATTGGGGCTATAC+TGG | 0.365924 | 3.1:+83228043 | None:intergenic |
| GGTCTTGTTATATGTGTTAC+CGG | 0.369177 | 3.1:-83228336 | MS.gene32744:CDS |
| ATCCAAAGAAGGTGCTAGTT+TGG | 0.369729 | 3.1:-83226765 | MS.gene32744:CDS |
| GATTACACCCAATAACCTTC+TGG | 0.380114 | 3.1:-83225635 | MS.gene32744:CDS |
| TGCAGAGTCTAACAGAAGTT+TGG | 0.395732 | 3.1:-83226996 | MS.gene32744:CDS |
| GTACATTGAGGATGCAGATT+GGG | 0.398670 | 3.1:+83228033 | None:intergenic |
| TGCAATTCGGATGAAATGCC+TGG | 0.401863 | 3.1:+83226938 | None:intergenic |
| TTTGGCAGAAGCAAGGAATC+AGG | 0.406989 | 3.1:-83228094 | MS.gene32744:intron |
| TCGATCAGTTTACTCAAGTA+AGG | 0.418161 | 3.1:-83225009 | MS.gene32744:CDS |
| GAAGAATTTCGAAGATTCTC+TGG | 0.419860 | 3.1:-83227019 | MS.gene32744:CDS |
| TGTCACACTGGGTTGGTTTG+TGG | 0.422711 | 3.1:-83227385 | MS.gene32744:CDS |
| ACATCCATTCAAAGATATCT+TGG | 0.423871 | 3.1:-83226692 | MS.gene32744:CDS |
| AGTTTGGACTCAAGTTTGTC+TGG | 0.430371 | 3.1:-83226980 | MS.gene32744:CDS |
| GCATCCTCAATGTACTCATT+TGG | 0.432536 | 3.1:-83228025 | MS.gene32744:CDS |
| GGCCTCTTTGTTGTCACACT+GGG | 0.434913 | 3.1:-83227396 | MS.gene32744:CDS |
| GAATCGCCACATCTATTTCA+AGG | 0.441565 | 3.1:+83225060 | None:intergenic |
| ATCCACACCTTTAGATAAAC+CGG | 0.444295 | 3.1:+83228317 | None:intergenic |
| AGAAGGTTATTGGGTGTAAT+CGG | 0.444905 | 3.1:+83225637 | None:intergenic |
| CTTCAAACTATAAAGTGATT+CGG | 0.448581 | 3.1:+83227156 | None:intergenic |
| AATGCCTGGATCAACGTAGA+TGG | 0.449609 | 3.1:+83226952 | None:intergenic |
| CCAGCAAAAGGAGCATTTGA+TGG | 0.452352 | 3.1:+83228357 | None:intergenic |
| TCCTCAATGTACTCATTTGG+TGG | 0.452439 | 3.1:-83228022 | MS.gene32744:intron |
| TGTGTTACCGGTTTATCTAA+AGG | 0.452554 | 3.1:-83228324 | MS.gene32744:intron |
| ATAGAGTCCAGAAGGTTATT+GGG | 0.457546 | 3.1:+83225628 | None:intergenic |
| CTGAAATGTCATCAAGCATC+AGG | 0.464163 | 3.1:+83226323 | None:intergenic |
| ATCTCGGAAAACCGGTCCAC+AGG | 0.464717 | 3.1:+83225307 | None:intergenic |
| TTGGCAGACCAATGGTTTGT+TGG | 0.465550 | 3.1:-83226746 | MS.gene32744:CDS |
| ATGTGTATGAGTTATTACTT+AGG | 0.468174 | 3.1:-83224884 | MS.gene32744:CDS |
| TGCTCCATCTACGTTGATCC+AGG | 0.475904 | 3.1:-83226956 | MS.gene32744:CDS |
| TGATGCAAAAGGGGATGAGA+AGG | 0.477811 | 3.1:-83225509 | MS.gene32744:CDS |
| GAAGACATGTAAAACCGTTA+TGG | 0.482418 | 3.1:+83225257 | None:intergenic |
| GAGTTATTACTTAGGGCATA+AGG | 0.483600 | 3.1:-83224876 | None:intergenic |
| TCTTTGTTGTCACACTGGGT+TGG | 0.484753 | 3.1:-83227392 | MS.gene32744:CDS |
| TGGGGATAACAATATGAAGT+TGG | 0.486015 | 3.1:-83227128 | MS.gene32744:CDS |
| TGATGCTTGATGACATTTCA+GGG | 0.486927 | 3.1:-83226321 | MS.gene32744:CDS |
| AATCAGAACTCTTCAACCAT+TGG | 0.490906 | 3.1:-83228415 | MS.gene32744:CDS |
| AATTGCGGAGAGGATGAAAC+AGG | 0.492134 | 3.1:+83228381 | None:intergenic |
| GTTGAAGTTGCGAGTGGCAA+AGG | 0.494441 | 3.1:-83228462 | MS.gene32744:CDS |
| CCGGTCCACAGGGAAGAGTA+TGG | 0.500922 | 3.1:+83225318 | None:intergenic |
| AAGGGCCGATCTCGGAAAAC+CGG | 0.502602 | 3.1:+83225299 | None:intergenic |
| TGTGTATGAGTTATTACTTA+GGG | 0.502710 | 3.1:-83224883 | MS.gene32744:CDS |
| TGGCCTCTTTGTTGTCACAC+TGG | 0.503600 | 3.1:-83227397 | MS.gene32744:CDS |
| TCGCCGTGGTCGTCGAATGC+AGG | 0.505488 | 3.1:-83226024 | MS.gene32744:intron |
| CGAGTGGCAAAGGGTGTTCG+AGG | 0.509530 | 3.1:-83228452 | MS.gene32744:CDS |
| AGGATGAAACAGGAGACATT+TGG | 0.509792 | 3.1:+83228391 | None:intergenic |
| AGTACATTGAGGATGCAGAT+TGG | 0.510198 | 3.1:+83228032 | None:intergenic |
| CCATACTCTTCCCTGTGGAC+CGG | 0.511727 | 3.1:-83225318 | MS.gene32744:CDS |
| ATGGAGGCTACAGAGAGATT+AGG | 0.517779 | 3.1:-83228069 | MS.gene32744:CDS |
| GGAGCATTTGATGGCAATTG+CGG | 0.518188 | 3.1:+83228366 | None:intergenic |
| CTTCCCGGGTACACAAATGC+TGG | 0.520659 | 3.1:-83227091 | MS.gene32744:CDS |
| CATATAACAAGACCAGCAAA+AGG | 0.535472 | 3.1:+83228345 | None:intergenic |
| GCTGAAACTGCATCCAAAGA+AGG | 0.536257 | 3.1:-83226776 | MS.gene32744:CDS |
| ACAGGAGACATTTGGTCCAA+TGG | 0.538148 | 3.1:+83228399 | None:intergenic |
| TTGAAGTTGCGAGTGGCAAA+GGG | 0.545784 | 3.1:-83228461 | MS.gene32744:CDS |
| ATTTCCAGCATTTGTGTACC+CGG | 0.546283 | 3.1:+83227087 | None:intergenic |
| AAAGTCCATGACGATCTTCA+GGG | 0.549038 | 3.1:-83226116 | MS.gene32744:CDS |
| GTTGATTTGGCAAGACAAGT+TGG | 0.550833 | 3.1:-83226346 | MS.gene32744:CDS |
| GTTGGTTTGTGGATAGTGTC+AGG | 0.558130 | 3.1:-83227374 | MS.gene32744:CDS |
| GTGCTAGTTTGGCAGACCAA+TGG | 0.559716 | 3.1:-83226754 | MS.gene32744:CDS |
| GCCACATCTATTTCAAGGCT+AGG | 0.562789 | 3.1:+83225065 | None:intergenic |
| GTTAGTCATGTAGTCACTGA+AGG | 0.562909 | 3.1:-83226716 | MS.gene32744:CDS |
| TTTGAGCATGCAGTAAAGCA+TGG | 0.564693 | 3.1:-83227429 | MS.gene32744:CDS |
| TCTTGAGGAAGGGCCGATCT+CGG | 0.565420 | 3.1:+83225291 | None:intergenic |
| GTAACAGTTATGGGTGGTGA+GGG | 0.565849 | 3.1:-83228489 | None:intergenic |
| CAGATTCAAGACATGCGGAC+AGG | 0.572808 | 3.1:-83225034 | MS.gene32744:CDS |
| GTATCCAAGATATCTTTGAA+TGG | 0.574153 | 3.1:+83226688 | None:intergenic |
| GTAAGGAAACAGCGGAGCGT+GGG | 0.574806 | 3.1:-83224992 | MS.gene32744:CDS |
| ACCTTCTGGACTCTATCTGT+TGG | 0.575317 | 3.1:-83225621 | MS.gene32744:CDS |
| AGTAAGGAAACAGCGGAGCG+TGG | 0.576929 | 3.1:-83224993 | MS.gene32744:CDS |
| GCTTGATGACATTTCAGGGA+AGG | 0.577574 | 3.1:-83226317 | MS.gene32744:intron |
| TTCATCCGAATTGCAAAACA+AGG | 0.577926 | 3.1:-83226930 | MS.gene32744:intron |
| CATTACAGCCAACAAACCAT+TGG | 0.587337 | 3.1:+83226738 | None:intergenic |
| TACATTGAGGATGCAGATTG+GGG | 0.589195 | 3.1:+83228034 | None:intergenic |
| TAGAAGCACTCACTGTAATG+AGG | 0.589590 | 3.1:+83226657 | None:intergenic |
| TACTGCCCTGAAGATCGTCA+TGG | 0.589825 | 3.1:+83226111 | None:intergenic |
| GTGGATTCTCAAAACAGCTA+AGG | 0.597139 | 3.1:-83226401 | MS.gene32744:CDS |
| CCTTTCTGTTAGAGGACGTG+TGG | 0.598952 | 3.1:+83225462 | None:intergenic |
| TCTCGGAAAACCGGTCCACA+GGG | 0.604616 | 3.1:+83225308 | None:intergenic |
| TTGGGTGTAATCGGACGGAT+CGG | 0.604793 | 3.1:+83225646 | None:intergenic |
| GGTAACAGTTATGGGTGGTG+AGG | 0.606272 | 3.1:-83228490 | None:intergenic |
| ACCAACAGATAGAGTCCAGA+AGG | 0.609079 | 3.1:+83225620 | None:intergenic |
| CCACACGTCCTCTAACAGAA+AGG | 0.609978 | 3.1:-83225462 | MS.gene32744:intron |
| GAAATGTTGAAGCGCGTGAG+TGG | 0.613290 | 3.1:-83224921 | MS.gene32744:CDS |
| AACCCAGTGTGACAACAAAG+AGG | 0.624024 | 3.1:+83227394 | None:intergenic |
| CTAAGGAGAAACAAGTGCAA+AGG | 0.624728 | 3.1:-83226384 | MS.gene32744:CDS |
| TTATAGTTTGAAGAATTATG+GGG | 0.627002 | 3.1:-83227146 | MS.gene32744:CDS |
| GGTTATTGGGTGTAATCGGA+CGG | 0.627487 | 3.1:+83225641 | None:intergenic |
| GCCTAGCCTTGAAATAGATG+TGG | 0.639029 | 3.1:-83225066 | MS.gene32744:CDS |
| TTAGTCATGTAGTCACTGAA+GGG | 0.640621 | 3.1:-83226715 | MS.gene32744:CDS |
| AGAAGCAAGGAATCAGGTCA+TGG | 0.644925 | 3.1:-83228088 | MS.gene32744:CDS |
| GAGGCTACAGAGAGATTAGG+TGG | 0.645575 | 3.1:-83228066 | MS.gene32744:CDS |
| TCTCACCATACTCTTCCCTG+TGG | 0.646627 | 3.1:-83225323 | MS.gene32744:CDS |
| ACCACCAAATGAGTACATTG+AGG | 0.647498 | 3.1:+83228021 | None:intergenic |
| TTTCCAGCATTTGTGTACCC+GGG | 0.655427 | 3.1:+83227088 | None:intergenic |
| TGACCTGCATTCGACGACCA+CGG | 0.662666 | 3.1:+83226021 | None:intergenic |
| AAGTAATAACTCATACACAT+TGG | 0.664276 | 3.1:+83224887 | None:intergenic |
| TCATACAGATTCAAGACATG+CGG | 0.674214 | 3.1:-83225039 | MS.gene32744:CDS |
| ATTTGATGGCAATTGCGGAG+AGG | 0.674786 | 3.1:+83228371 | None:intergenic |
| ATGATATTTCTCAGCCAGTG+TGG | 0.684887 | 3.1:-83226420 | MS.gene32744:intron |
| GGTAGAGTTGAAGTTGCGAG+TGG | 0.698549 | 3.1:-83228468 | MS.gene32744:CDS |
| AGCAAGGAATCAGGTCATGG+AGG | 0.703167 | 3.1:-83228085 | MS.gene32744:CDS |
| GTGGTGGTAACAGTTATGGG+TGG | 0.723421 | 3.1:-83228495 | None:intergenic |
| AATGGTGTCAGAAGTCGCCG+TGG | 0.728899 | 3.1:-83226038 | MS.gene32744:CDS |
| TTACTCAAGTAAGGAAACAG+CGG | 0.729643 | 3.1:-83225000 | MS.gene32744:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTATAACAAATGCTAATA+AGG | + | chr3.1:83228178-83228197 | None:intergenic | 15.0% |
| !! | TTTATAGTTTGAAGAATTAT+GGG | - | chr3.1:83226211-83226230 | MS.gene32744:intron | 15.0% |
| !!! | AAACATTTAGAATAATCTTT+TGG | - | chr3.1:83226746-83226765 | MS.gene32744:CDS | 15.0% |
| !!! | GTTTTGCTTTTTTTTTTTAA+CGG | - | chr3.1:83226815-83226834 | MS.gene32744:intron | 15.0% |
| !!! | TATTAGCATTTGTTATAATA+CGG | - | chr3.1:83228178-83228197 | MS.gene32744:intron | 15.0% |
| !! | AAAAAAAAAAGCAAAACAAG+TGG | + | chr3.1:83226812-83226831 | None:intergenic | 20.0% |
| !! | AAAAAAAAAGCAAAACAAGT+GGG | + | chr3.1:83226811-83226830 | None:intergenic | 20.0% |
| !! | AAAATTCAAGATGATTTAGA+AGG | + | chr3.1:83225376-83225395 | None:intergenic | 20.0% |
| !! | ATAAAGTAGAAATACTGATA+TGG | + | chr3.1:83225546-83225565 | None:intergenic | 20.0% |
| !! | ATATGTTAAAGATTTCATGA+TGG | + | chr3.1:83225886-83225905 | None:intergenic | 20.0% |
| !! | ATTAATATTATGCGATAAGT+AGG | - | chr3.1:83226872-83226891 | MS.gene32744:intron | 20.0% |
| !! | CCATTGTGATATAAATAATA+CGG | + | chr3.1:83226904-83226923 | None:intergenic | 20.0% |
| !! | CGAAATTAAATATTCCAATA+TGG | + | chr3.1:83227575-83227594 | None:intergenic | 20.0% |
| !! | CTTTATAGTTTGAAGAATTA+TGG | - | chr3.1:83226210-83226229 | MS.gene32744:intron | 20.0% |
| !! | GTTAATGTTATTCTTTGAAT+TGG | - | chr3.1:83225238-83225257 | MS.gene32744:CDS | 20.0% |
| !! | TAAAGTAGAAATACTGATAT+GGG | + | chr3.1:83225545-83225564 | None:intergenic | 20.0% |
| !! | TGATATAAATAATACGGTAT+AGG | + | chr3.1:83226898-83226917 | None:intergenic | 20.0% |
| !! | TTATAGTTTGAAGAATTATG+GGG | - | chr3.1:83226212-83226231 | MS.gene32744:intron | 20.0% |
| !!! | AATATCTAGACATTTTGTAA+TGG | - | chr3.1:83226474-83226493 | MS.gene32744:intron | 20.0% |
| !!! | AATATTTTTTGATGCAAAAG+GGG | - | chr3.1:83227840-83227859 | MS.gene32744:intron | 20.0% |
| !!! | AATTGTTTGCTTAACTTTTT+TGG | - | chr3.1:83225495-83225514 | MS.gene32744:CDS | 20.0% |
| !!! | ATGGTTTTTAAATATCAACT+CGG | + | chr3.1:83228013-83228032 | None:intergenic | 20.0% |
| !!! | CAATATTTTTTGATGCAAAA+GGG | - | chr3.1:83227839-83227858 | MS.gene32744:intron | 20.0% |
| !!! | TATGGCTTAATATTTCATTT+TGG | - | chr3.1:83227969-83227988 | MS.gene32744:intron | 20.0% |
| !!! | TCAATATTTTTTGATGCAAA+AGG | - | chr3.1:83227838-83227857 | MS.gene32744:intron | 20.0% |
| !!! | TTGAAACGAATTGAATTTTT+GGG | - | chr3.1:83228398-83228417 | MS.gene32744:CDS | 20.0% |
| !!! | TTTTGCATCAAAAAATATTG+AGG | + | chr3.1:83227839-83227858 | None:intergenic | 20.0% |
| ! | AAAATTAGCGAGTTTAATCT+TGG | + | chr3.1:83227119-83227138 | None:intergenic | 25.0% |
| ! | AAAGATAACAAACTAAAGAC+AGG | + | chr3.1:83227612-83227631 | None:intergenic | 25.0% |
| ! | AAGTAATAACTCATACACAT+TGG | + | chr3.1:83228474-83228493 | None:intergenic | 25.0% |
| ! | AATAAGATATTGATGAGCAT+AGG | + | chr3.1:83225778-83225797 | None:intergenic | 25.0% |
| ! | ATCACAATTTCAAGAAAATG+AGG | + | chr3.1:83227185-83227204 | None:intergenic | 25.0% |
| ! | ATGTGTATGAGTTATTACTT+AGG | - | chr3.1:83228474-83228493 | MS.gene32744:CDS | 25.0% |
| ! | ATTGTAAATTCAGCGAAAAA+TGG | - | chr3.1:83227302-83227321 | MS.gene32744:intron | 25.0% |
| ! | CCGTATTATTTATATCACAA+TGG | - | chr3.1:83226901-83226920 | MS.gene32744:intron | 25.0% |
| ! | CTTCAAACTATAAAGTGATT+CGG | + | chr3.1:83226205-83226224 | None:intergenic | 25.0% |
| ! | GTATTTACAATTCCAAGAAA+AGG | + | chr3.1:83227097-83227116 | None:intergenic | 25.0% |
| ! | TACAAAATATTGTGAAGTAG+CGG | - | chr3.1:83225661-83225680 | MS.gene32744:CDS | 25.0% |
| ! | TCACAATTTCAAGAAAATGA+GGG | + | chr3.1:83227184-83227203 | None:intergenic | 25.0% |
| ! | TGCTGATGCTATTATTATAT+AGG | + | chr3.1:83225399-83225418 | None:intergenic | 25.0% |
| ! | TGTGTATGAGTTATTACTTA+GGG | - | chr3.1:83228475-83228494 | MS.gene32744:CDS | 25.0% |
| ! | TTAAGCCATATTTACTACAT+CGG | + | chr3.1:83227959-83227978 | None:intergenic | 25.0% |
| ! | TTTAGATGCTTTACATGTAT+AGG | - | chr3.1:83226557-83226576 | MS.gene32744:intron | 25.0% |
| !! | AAGTTAAGCAAACAATTTTC+AGG | + | chr3.1:83225492-83225511 | None:intergenic | 25.0% |
| !! | ATTGAGGTATGATTTTCATT+AGG | + | chr3.1:83227823-83227842 | None:intergenic | 25.0% |
| !! | GTTGAAACGAATTGAATTTT+TGG | - | chr3.1:83228397-83228416 | MS.gene32744:CDS | 25.0% |
| !! | TCAGTATTTCTACTTTATCT+CGG | - | chr3.1:83225548-83225567 | MS.gene32744:CDS | 25.0% |
| !! | TTTAACATATAGCACAGTTT+TGG | - | chr3.1:83225896-83225915 | MS.gene32744:intron | 25.0% |
| !!! | ATTTACCTTGTTTTGCAATT+CGG | + | chr3.1:83226436-83226455 | None:intergenic | 25.0% |
| !!! | CATTTAGAATAATCTTTTGG+AGG | - | chr3.1:83226749-83226768 | MS.gene32744:CDS | 25.0% |
| !!! | TAACAGAACTTTTTTCCAAT+GGG | + | chr3.1:83225466-83225485 | None:intergenic | 25.0% |
| !!! | TTAACAGAACTTTTTTCCAA+TGG | + | chr3.1:83225467-83225486 | None:intergenic | 25.0% |
| AACTCAAATCACATGTATAG+TGG | + | chr3.1:83227480-83227499 | None:intergenic | 30.0% | |
| ACATCCATTCAAAGATATCT+TGG | - | chr3.1:83226666-83226685 | MS.gene32744:intron | 30.0% | |
| ACTATACATGTGATTTGAGT+TGG | - | chr3.1:83227479-83227498 | MS.gene32744:intron | 30.0% | |
| AGACCAAAATGTTAAGAATG+AGG | + | chr3.1:83227538-83227557 | None:intergenic | 30.0% | |
| AGCAAAATCAACAAACTTAG+AGG | + | chr3.1:83227454-83227473 | None:intergenic | 30.0% | |
| ATATACTTACATGAACCCAT+TGG | - | chr3.1:83225448-83225467 | MS.gene32744:intron | 30.0% | |
| ATCTCGGTATTGTTAAATAG+TGG | - | chr3.1:83225564-83225583 | MS.gene32744:CDS | 30.0% | |
| ATGAAACTGGATTTCCATAT+TGG | - | chr3.1:83227558-83227577 | MS.gene32744:intron | 30.0% | |
| CAATGACTTCAAGTAAGATA+AGG | + | chr3.1:83225105-83225124 | None:intergenic | 30.0% | |
| CAATTCACAATTGACAAAAC+TGG | - | chr3.1:83225733-83225752 | MS.gene32744:intron | 30.0% | |
| CTGAATTTCATTGACATAAC+AGG | - | chr3.1:83227205-83227224 | MS.gene32744:intron | 30.0% | |
| CTTATCTTACTTGAAGTCAT+TGG | - | chr3.1:83225103-83225122 | MS.gene32744:intron | 30.0% | |
| GTAAAGCATGGAACAAAAAA+TGG | - | chr3.1:83225941-83225960 | MS.gene32744:intron | 30.0% | |
| GTATCCAAGATATCTTTGAA+TGG | + | chr3.1:83226673-83226692 | None:intergenic | 30.0% | |
| TAAGCCATATTTACTACATC+GGG | + | chr3.1:83227958-83227977 | None:intergenic | 30.0% | |
| TCAAGATGATTTAGAAGGAA+AGG | + | chr3.1:83225371-83225390 | None:intergenic | 30.0% | |
| TCATATACTTGAGCTTGAAA+AGG | - | chr3.1:83225158-83225177 | MS.gene32744:intron | 30.0% | |
| TCATGTCTTCTATGATTGAT+TGG | - | chr3.1:83225064-83225083 | MS.gene32744:CDS | 30.0% | |
| TGAAAAATGTTCTTGAGGAA+GGG | + | chr3.1:83228080-83228099 | None:intergenic | 30.0% | |
| TTACAATTCCAAGAAAAGGA+GGG | + | chr3.1:83227093-83227112 | None:intergenic | 30.0% | |
| TTCAACAAACCACTCAAATT+TGG | - | chr3.1:83227137-83227156 | MS.gene32744:CDS | 30.0% | |
| TTGTGAATTGCAGAAAATAG+AGG | + | chr3.1:83225723-83225742 | None:intergenic | 30.0% | |
| TTGTTAAATAGTGGCTATAG+AGG | - | chr3.1:83225573-83225592 | MS.gene32744:CDS | 30.0% | |
| TTTACAATTCCAAGAAAAGG+AGG | + | chr3.1:83227094-83227113 | None:intergenic | 30.0% | |
| ! | CATGCATTTTATCAGGTAAA+AGG | - | chr3.1:83228141-83228160 | MS.gene32744:intron | 30.0% |
| ! | CTTTTACCTGATAAAATGCA+TGG | + | chr3.1:83228143-83228162 | None:intergenic | 30.0% |
| ! | GGAATATTTAATTTCGAGCA+CGG | - | chr3.1:83227579-83227598 | MS.gene32744:intron | 30.0% |
| ! | GTTCCTCATTCTTAACATTT+TGG | - | chr3.1:83227532-83227551 | MS.gene32744:intron | 30.0% |
| ! | TATTCTTTGAATTGGCGTTT+TGG | - | chr3.1:83225246-83225265 | MS.gene32744:CDS | 30.0% |
| ! | TCATATCCATGCATTTTATC+AGG | - | chr3.1:83228134-83228153 | MS.gene32744:intron | 30.0% |
| ! | TCATTTTGTCTACTACAGTA+AGG | - | chr3.1:83226175-83226194 | MS.gene32744:intron | 30.0% |
| ! | TTGTGTGAGAGAAGTAATTT+TGG | - | chr3.1:83225518-83225537 | MS.gene32744:CDS | 30.0% |
| ! | TTTTCCCGATGTAGTAAATA+TGG | - | chr3.1:83227951-83227970 | MS.gene32744:intron | 30.0% |
| ! | TTTTGCAAACCAAATTTGAG+TGG | + | chr3.1:83227149-83227168 | None:intergenic | 30.0% |
| !! | AACATTTTGGTCTATGAAAC+TGG | - | chr3.1:83227545-83227564 | MS.gene32744:intron | 30.0% |
| !! | AGAACATTTTTCAGCCATAA+CGG | - | chr3.1:83228087-83228106 | MS.gene32744:CDS | 30.0% |
| !! | TGTGATTTGAGTTGGTAATT+TGG | - | chr3.1:83227487-83227506 | MS.gene32744:intron | 30.0% |
| AAAAAAGCAAAACAAGTGGG+AGG | + | chr3.1:83226808-83226827 | None:intergenic | 35.0% | |
| AATCAGAACTCTTCAACCAT+TGG | - | chr3.1:83224943-83224962 | MS.gene32744:CDS | 35.0% | |
| AGAAGGTTATTGGGTGTAAT+CGG | + | chr3.1:83227724-83227743 | None:intergenic | 35.0% | |
| ATAGAGTCCAGAAGGTTATT+GGG | + | chr3.1:83227733-83227752 | None:intergenic | 35.0% | |
| ATCCACACCTTTAGATAAAC+CGG | + | chr3.1:83225044-83225063 | None:intergenic | 35.0% | |
| ATGGCTGAAAAATGTTCTTG+AGG | + | chr3.1:83228085-83228104 | None:intergenic | 35.0% | |
| CATATAACAAGACCAGCAAA+AGG | + | chr3.1:83225016-83225035 | None:intergenic | 35.0% | |
| CATGTAATTGTGTGTCTTAG+AGG | - | chr3.1:83227416-83227435 | MS.gene32744:CDS | 35.0% | |
| CTCTATCTGTTGGTCAATAT+CGG | - | chr3.1:83227747-83227766 | MS.gene32744:intron | 35.0% | |
| CTGAAAAATGTTCTTGAGGA+AGG | + | chr3.1:83228081-83228100 | None:intergenic | 35.0% | |
| GAAAGGTTGTTCTCAATTTG+TGG | - | chr3.1:83227913-83227932 | MS.gene32744:intron | 35.0% | |
| GAAGAATTTCGAAGATTCTC+TGG | - | chr3.1:83226339-83226358 | MS.gene32744:CDS | 35.0% | |
| GAAGACATGTAAAACCGTTA+TGG | + | chr3.1:83228104-83228123 | None:intergenic | 35.0% | |
| GATAACAAACTAAAGACAGG+TGG | + | chr3.1:83227609-83227628 | None:intergenic | 35.0% | |
| GATGAGTATGCTTGATTTCA+TGG | + | chr3.1:83226314-83226333 | None:intergenic | 35.0% | |
| TCATACAGATTCAAGACATG+CGG | - | chr3.1:83228319-83228338 | MS.gene32744:intron | 35.0% | |
| TCGATCAGTTTACTCAAGTA+AGG | - | chr3.1:83228349-83228368 | MS.gene32744:CDS | 35.0% | |
| TGGGGATAACAATATGAAGT+TGG | - | chr3.1:83226230-83226249 | MS.gene32744:intron | 35.0% | |
| TTACTCAAGTAAGGAAACAG+CGG | - | chr3.1:83228358-83228377 | MS.gene32744:CDS | 35.0% | |
| TTAGTCATGTAGTCACTGAA+GGG | - | chr3.1:83226643-83226662 | MS.gene32744:intron | 35.0% | |
| TTCATCCGAATTGCAAAACA+AGG | - | chr3.1:83226428-83226447 | MS.gene32744:intron | 35.0% | |
| TTGATTTCATGGATTCTTGC+AGG | + | chr3.1:83226303-83226322 | None:intergenic | 35.0% | |
| ! | TAACGGTTTTACATGTCTTC+AGG | - | chr3.1:83228104-83228123 | MS.gene32744:intron | 35.0% |
| ! | TGATGCTTGATGACATTTCA+GGG | - | chr3.1:83227037-83227056 | MS.gene32744:CDS | 35.0% |
| ! | TGTTAGCATGTCTGTTGATT+TGG | - | chr3.1:83226999-83227018 | MS.gene32744:CDS | 35.0% |
| ! | TTTTACATGTCTTCAGGTGT+TGG | - | chr3.1:83228110-83228129 | MS.gene32744:intron | 35.0% |
| ! | TTTTGTCTTTTCAGTGGAGT+TGG | - | chr3.1:83227382-83227401 | MS.gene32744:CDS | 35.0% |
| !! | AACATATAGCACAGTTTTGG+CGG | - | chr3.1:83225899-83225918 | MS.gene32744:intron | 35.0% |
| !! | CTCTAAGACACACAATTACA+TGG | + | chr3.1:83227418-83227437 | None:intergenic | 35.0% |
| !! | GGTCTTGTTATATGTGTTAC+CGG | - | chr3.1:83225022-83225041 | MS.gene32744:CDS | 35.0% |
| !! | TGTGTTACCGGTTTATCTAA+AGG | - | chr3.1:83225034-83225053 | MS.gene32744:CDS | 35.0% |
| AAAAGTCCATGACGATCTTC+AGG | - | chr3.1:83227241-83227260 | MS.gene32744:intron | 40.0% | |
| AAAGTCCATGACGATCTTCA+GGG | - | chr3.1:83227242-83227261 | MS.gene32744:intron | 40.0% | |
| AATATCACAAAAGCCGTGTC+AGG | + | chr3.1:83226099-83226118 | None:intergenic | 40.0% | |
| ACCACCAAATGAGTACATTG+AGG | + | chr3.1:83225340-83225359 | None:intergenic | 40.0% | |
| AGGATGAAACAGGAGACATT+TGG | + | chr3.1:83224970-83224989 | None:intergenic | 40.0% | |
| AGTACATTGAGGATGCAGAT+TGG | + | chr3.1:83225329-83225348 | None:intergenic | 40.0% | |
| AGTGTATCGCAGAACAATAG+TGG | + | chr3.1:83225635-83225654 | None:intergenic | 40.0% | |
| AGTTTGGACTCAAGTTTGTC+TGG | - | chr3.1:83226378-83226397 | MS.gene32744:CDS | 40.0% | |
| ATGATATTTCTCAGCCAGTG+TGG | - | chr3.1:83226938-83226957 | MS.gene32744:CDS | 40.0% | |
| ATGTCTTCCAGAAGATGTAC+AGG | + | chr3.1:83226843-83226862 | None:intergenic | 40.0% | |
| ATTTCCAGCATTTGTGTACC+CGG | + | chr3.1:83226274-83226293 | None:intergenic | 40.0% | |
| CAAGAAAAGGAGGGAAATCT+AGG | + | chr3.1:83227084-83227103 | None:intergenic | 40.0% | |
| CAAGAAAATGAGGGAAGTCT+AGG | + | chr3.1:83227175-83227194 | None:intergenic | 40.0% | |
| CACTAATGAGACAATGGATG+TGG | - | chr3.1:83228246-83228265 | MS.gene32744:intron | 40.0% | |
| CACTGAAAAGACAAAAGTGG+AGG | + | chr3.1:83227378-83227397 | None:intergenic | 40.0% | |
| CAGGGCAGTAAAAGTGAAAT+TGG | - | chr3.1:83227260-83227279 | MS.gene32744:intron | 40.0% | |
| CAGTTTCCTCTGTTTCAGTT+AGG | - | chr3.1:83226500-83226519 | MS.gene32744:intron | 40.0% | |
| CATTACAGCCAACAAACCAT+TGG | + | chr3.1:83226623-83226642 | None:intergenic | 40.0% | |
| CCATGATCATGGTTCATAAG+AGG | + | chr3.1:83225818-83225837 | None:intergenic | 40.0% | |
| CCTCTTATGAACCATGATCA+TGG | - | chr3.1:83225815-83225834 | MS.gene32744:intron | 40.0% | |
| CGGGAAAAAATATACCCATC+AGG | + | chr3.1:83227939-83227958 | None:intergenic | 40.0% | |
| CTAAGGAGAAACAAGTGCAA+AGG | - | chr3.1:83226974-83226993 | MS.gene32744:CDS | 40.0% | |
| CTACGAAAATATCCATGCTG+TGG | + | chr3.1:83225861-83225880 | None:intergenic | 40.0% | |
| CTCCACTGAAAAGACAAAAG+TGG | + | chr3.1:83227381-83227400 | None:intergenic | 40.0% | |
| CTGAAATGTCATCAAGCATC+AGG | + | chr3.1:83227038-83227057 | None:intergenic | 40.0% | |
| CTTGAAGTCATGCACTATAC+AGG | - | chr3.1:83226071-83226090 | MS.gene32744:CDS | 40.0% | |
| GAATCGCCACATCTATTTCA+AGG | + | chr3.1:83228301-83228320 | None:intergenic | 40.0% | |
| GAGAACAACCTTTCTGTTAG+AGG | + | chr3.1:83227907-83227926 | None:intergenic | 40.0% | |
| GATAGAGTCCAGAAGGTTAT+TGG | + | chr3.1:83227734-83227753 | None:intergenic | 40.0% | |
| GATTACACCCAATAACCTTC+TGG | - | chr3.1:83227723-83227742 | MS.gene32744:intron | 40.0% | |
| GCATCCTCAATGTACTCATT+TGG | - | chr3.1:83225333-83225352 | MS.gene32744:CDS | 40.0% | |
| GTACATTGAGGATGCAGATT+GGG | + | chr3.1:83225328-83225347 | None:intergenic | 40.0% | |
| GTGGATAGTGTCAGGAAAAA+TGG | - | chr3.1:83225992-83226011 | MS.gene32744:intron | 40.0% | |
| GTGGATTCTCAAAACAGCTA+AGG | - | chr3.1:83226957-83226976 | MS.gene32744:CDS | 40.0% | |
| GTTAGTCATGTAGTCACTGA+AGG | - | chr3.1:83226642-83226661 | MS.gene32744:intron | 40.0% | |
| TACATTGAGGATGCAGATTG+GGG | + | chr3.1:83225327-83225346 | None:intergenic | 40.0% | |
| TCAGGTAAAAGGAAACTTGC+AGG | - | chr3.1:83228152-83228171 | MS.gene32744:intron | 40.0% | |
| TCCTCAATGTACTCATTTGG+TGG | - | chr3.1:83225336-83225355 | MS.gene32744:CDS | 40.0% | |
| TGCAGAGTCTAACAGAAGTT+TGG | - | chr3.1:83226362-83226381 | MS.gene32744:CDS | 40.0% | |
| TGTCGTCACTAATGAGACAA+TGG | - | chr3.1:83228240-83228259 | MS.gene32744:intron | 40.0% | |
| TGTCTTCCAGAAGATGTACA+GGG | + | chr3.1:83226842-83226861 | None:intergenic | 40.0% | |
| TTCTCAATTTGTGGCCTGAT+GGG | - | chr3.1:83227922-83227941 | MS.gene32744:intron | 40.0% | |
| TTTGAGCATGCAGTAAAGCA+TGG | - | chr3.1:83225929-83225948 | MS.gene32744:intron | 40.0% | |
| ! | ATGATTTTAGACTGCTTCCC+GGG | - | chr3.1:83226253-83226272 | MS.gene32744:intron | 40.0% |
| ! | CTAGATTTCCCTCCTTTTCT+TGG | - | chr3.1:83227082-83227101 | MS.gene32744:CDS | 40.0% |
| ! | CTGATGCTTGATGACATTTC+AGG | - | chr3.1:83227036-83227055 | MS.gene32744:CDS | 40.0% |
| ! | GATGATTTTAGACTGCTTCC+CGG | - | chr3.1:83226252-83226271 | MS.gene32744:intron | 40.0% |
| ! | GATGTGGCGATTTTTGTGAT+AGG | - | chr3.1:83228262-83228281 | MS.gene32744:intron | 40.0% |
| ! | GGAAGAGTATGGTGAGAAAA+TGG | + | chr3.1:83228032-83228051 | None:intergenic | 40.0% |
| !! | ATCCAAAGAAGGTGCTAGTT+TGG | - | chr3.1:83226593-83226612 | MS.gene32744:intron | 40.0% |
| !! | CTCCACTTTTGTCTTTTCAG+TGG | - | chr3.1:83227376-83227395 | MS.gene32744:CDS | 40.0% |
| !! | GTTGATTTGGCAAGACAAGT+TGG | - | chr3.1:83227012-83227031 | MS.gene32744:CDS | 40.0% |
| !! | TACCGGTTTATCTAAAGGTG+TGG | - | chr3.1:83225039-83225058 | MS.gene32744:CDS | 40.0% |
| !! | TAGAAGCACTCACTGTAATG+AGG | + | chr3.1:83226704-83226723 | None:intergenic | 40.0% |
| AACCCAGTGTGACAACAAAG+AGG | + | chr3.1:83225967-83225986 | None:intergenic | 45.0% | |
| AATGCCTGGATCAACGTAGA+TGG | + | chr3.1:83226409-83226428 | None:intergenic | 45.0% | |
| AATTGCGGAGAGGATGAAAC+AGG | + | chr3.1:83224980-83224999 | None:intergenic | 45.0% | |
| ACAGGAGACATTTGGTCCAA+TGG | + | chr3.1:83224962-83224981 | None:intergenic | 45.0% | |
| ACCAACAGATAGAGTCCAGA+AGG | + | chr3.1:83227741-83227760 | None:intergenic | 45.0% | |
| ACCTTCTGGACTCTATCTGT+TGG | - | chr3.1:83227737-83227756 | MS.gene32744:intron | 45.0% | |
| AGAAGCAAGGAATCAGGTCA+TGG | - | chr3.1:83225270-83225289 | MS.gene32744:CDS | 45.0% | |
| ATCCATGCTGTGGAAACAGA+TGG | + | chr3.1:83225851-83225870 | None:intergenic | 45.0% | |
| ATGGAGGCTACAGAGAGATT+AGG | - | chr3.1:83225289-83225308 | MS.gene32744:CDS | 45.0% | |
| CACTATACAGGAACCTGACA+CGG | - | chr3.1:83226083-83226102 | MS.gene32744:CDS | 45.0% | |
| CATCAGCATGATGCTGTAGT+AGG | - | chr3.1:83225411-83225430 | MS.gene32744:intron | 45.0% | |
| GCAAGCAACAACCATGATCA+TGG | + | chr3.1:83225829-83225848 | None:intergenic | 45.0% | |
| GCCACATCTATTTCAAGGCT+AGG | + | chr3.1:83228296-83228315 | None:intergenic | 45.0% | |
| GCTGAAACTGCATCCAAAGA+AGG | - | chr3.1:83226582-83226601 | MS.gene32744:intron | 45.0% | |
| GGTTATTGGGTGTAATCGGA+CGG | + | chr3.1:83227720-83227739 | None:intergenic | 45.0% | |
| GTTCTCAATTTGTGGCCTGA+TGG | - | chr3.1:83227921-83227940 | MS.gene32744:intron | 45.0% | |
| TGATGCAAAAGGGGATGAGA+AGG | - | chr3.1:83227849-83227868 | MS.gene32744:intron | 45.0% | |
| TGCAATTCGGATGAAATGCC+TGG | + | chr3.1:83226423-83226442 | None:intergenic | 45.0% | |
| TGCCAAACTAGCACCTTCTT+TGG | + | chr3.1:83226598-83226617 | None:intergenic | 45.0% | |
| TTGAAGTTGCGAGTGGCAAA+GGG | - | chr3.1:83224897-83224916 | MS.gene32744:CDS | 45.0% | |
| TTTCCAGCATTTGTGTACCC+GGG | + | chr3.1:83226273-83226292 | None:intergenic | 45.0% | |
| TTTGGCAGAAGCAAGGAATC+AGG | - | chr3.1:83225264-83225283 | MS.gene32744:CDS | 45.0% | |
| ! | ATTTGATGGCAATTGCGGAG+AGG | + | chr3.1:83224990-83225009 | None:intergenic | 45.0% |
| ! | CCATCAAATGCTCCTTTTGC+TGG | - | chr3.1:83225001-83225020 | MS.gene32744:CDS | 45.0% |
| ! | GCGTATGACTGAAGTGTTCT+CGG | - | chr3.1:83226526-83226545 | MS.gene32744:intron | 45.0% |
| ! | GCTTGATGACATTTCAGGGA+AGG | - | chr3.1:83227041-83227060 | MS.gene32744:CDS | 45.0% |
| ! | GGAGCATTTGATGGCAATTG+CGG | + | chr3.1:83224995-83225014 | None:intergenic | 45.0% |
| ! | TCTTTGTTGTCACACTGGGT+TGG | - | chr3.1:83225966-83225985 | MS.gene32744:intron | 45.0% |
| ! | TTGGCAGACCAATGGTTTGT+TGG | - | chr3.1:83226612-83226631 | MS.gene32744:intron | 45.0% |
| !! | CCAGCAAAAGGAGCATTTGA+TGG | + | chr3.1:83225004-83225023 | None:intergenic | 45.0% |
| !! | GCCTAGCCTTGAAATAGATG+TGG | - | chr3.1:83228292-83228311 | MS.gene32744:intron | 45.0% |
| !! | GTTGGTTTGTGGATAGTGTC+AGG | - | chr3.1:83225984-83226003 | MS.gene32744:intron | 45.0% |
| !!! | GCTGTTTTGAGAATCCACAC+TGG | + | chr3.1:83226955-83226974 | None:intergenic | 45.0% |
| AACGGTCCCTGTACATCTTC+TGG | - | chr3.1:83226833-83226852 | MS.gene32744:intron | 50.0% | |
| AGCAAGGAATCAGGTCATGG+AGG | - | chr3.1:83225273-83225292 | MS.gene32744:CDS | 50.0% | |
| CAGATTCAAGACATGCGGAC+AGG | - | chr3.1:83228324-83228343 | MS.gene32744:intron | 50.0% | |
| CAGCATGATGCTGTAGTAGG+AGG | - | chr3.1:83225414-83225433 | MS.gene32744:intron | 50.0% | |
| CCACACGTCCTCTAACAGAA+AGG | - | chr3.1:83227896-83227915 | MS.gene32744:intron | 50.0% | |
| CCTTTCTGTTAGAGGACGTG+TGG | + | chr3.1:83227899-83227918 | None:intergenic | 50.0% | |
| GAAATGTTGAAGCGCGTGAG+TGG | - | chr3.1:83228437-83228456 | MS.gene32744:CDS | 50.0% | |
| GAGGCTACAGAGAGATTAGG+TGG | - | chr3.1:83225292-83225311 | MS.gene32744:CDS | 50.0% | |
| GATGCAGATTGGGGCTATAC+TGG | + | chr3.1:83225318-83225337 | None:intergenic | 50.0% | |
| GGTAGAGTTGAAGTTGCGAG+TGG | - | chr3.1:83224890-83224909 | MS.gene32744:CDS | 50.0% | |
| GTTGAAGTTGCGAGTGGCAA+AGG | - | chr3.1:83224896-83224915 | MS.gene32744:CDS | 50.0% | |
| TACTGCCCTGAAGATCGTCA+TGG | + | chr3.1:83227250-83227269 | None:intergenic | 50.0% | |
| TCTCACCATACTCTTCCCTG+TGG | - | chr3.1:83228035-83228054 | MS.gene32744:CDS | 50.0% | |
| TGCCATCTGTTTCCACAGCA+TGG | - | chr3.1:83225846-83225865 | MS.gene32744:intron | 50.0% | |
| TGCTCCATCTACGTTGATCC+AGG | - | chr3.1:83226402-83226421 | MS.gene32744:CDS | 50.0% | |
| TTGGGTGTAATCGGACGGAT+CGG | + | chr3.1:83227715-83227734 | None:intergenic | 50.0% | |
| ! | CGCTAGCCTAACTGAAACAG+AGG | + | chr3.1:83226509-83226528 | None:intergenic | 50.0% |
| ! | GGCCTCTTTGTTGTCACACT+GGG | - | chr3.1:83225962-83225981 | MS.gene32744:intron | 50.0% |
| ! | GTGCTAGTTTGGCAGACCAA+TGG | - | chr3.1:83226604-83226623 | MS.gene32744:intron | 50.0% |
| ! | TGGCCTCTTTGTTGTCACAC+TGG | - | chr3.1:83225961-83225980 | MS.gene32744:intron | 50.0% |
| !! | TGTCACACTGGGTTGGTTTG+TGG | - | chr3.1:83225973-83225992 | MS.gene32744:intron | 50.0% |
| !! | TTGGCGTTTTGGCAGAAGCA+AGG | - | chr3.1:83225257-83225276 | MS.gene32744:CDS | 50.0% |
| AAGGGCCGATCTCGGAAAAC+CGG | + | chr3.1:83228062-83228081 | None:intergenic | 55.0% | |
| AGTAAGGAAACAGCGGAGCG+TGG | - | chr3.1:83228365-83228384 | MS.gene32744:CDS | 55.0% | |
| ATCTCGGAAAACCGGTCCAC+AGG | + | chr3.1:83228054-83228073 | None:intergenic | 55.0% | |
| CCATACTCTTCCCTGTGGAC+CGG | - | chr3.1:83228040-83228059 | MS.gene32744:CDS | 55.0% | |
| CTTCCCGGGTACACAAATGC+TGG | - | chr3.1:83226267-83226286 | MS.gene32744:intron | 55.0% | |
| GCTATAGCACTGCTGCACAG+CGG | - | chr3.1:83225685-83225704 | MS.gene32744:intron | 55.0% | |
| GTAAGGAAACAGCGGAGCGT+GGG | - | chr3.1:83228366-83228385 | MS.gene32744:CDS | 55.0% | |
| TCTCGGAAAACCGGTCCACA+GGG | + | chr3.1:83228053-83228072 | None:intergenic | 55.0% | |
| TCTTGAGGAAGGGCCGATCT+CGG | + | chr3.1:83228070-83228089 | None:intergenic | 55.0% | |
| TGACCTGCATTCGACGACCA+CGG | + | chr3.1:83227340-83227359 | None:intergenic | 55.0% | |
| ! | AATGGTGTCAGAAGTCGCCG+TGG | - | chr3.1:83227320-83227339 | MS.gene32744:intron | 55.0% |
| !! | GTGGACCGGTTTTCCGAGAT+CGG | - | chr3.1:83228054-83228073 | MS.gene32744:CDS | 55.0% |
| CCGGTCCACAGGGAAGAGTA+TGG | + | chr3.1:83228043-83228062 | None:intergenic | 60.0% | |
| !! | CGAGTGGCAAAGGGTGTTCG+AGG | - | chr3.1:83224906-83224925 | MS.gene32744:CDS | 60.0% |
| TCGCCGTGGTCGTCGAATGC+AGG | - | chr3.1:83227334-83227353 | MS.gene32744:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 83224878 | 83228502 | 83224878 | ID=MS.gene32744 |
| chr3.1 | mRNA | 83224878 | 83228502 | 83224878 | ID=MS.gene32744.t1;Parent=MS.gene32744 |
| chr3.1 | exon | 83228325 | 83228502 | 83228325 | ID=MS.gene32744.t1.exon1;Parent=MS.gene32744.t1 |
| chr3.1 | CDS | 83228325 | 83228502 | 83228325 | ID=cds.MS.gene32744.t1;Parent=MS.gene32744.t1 |
| chr3.1 | exon | 83228023 | 83228108 | 83228023 | ID=MS.gene32744.t1.exon2;Parent=MS.gene32744.t1 |
| chr3.1 | CDS | 83228023 | 83228108 | 83228023 | ID=cds.MS.gene32744.t1;Parent=MS.gene32744.t1 |
| chr3.1 | exon | 83227367 | 83227472 | 83227367 | ID=MS.gene32744.t1.exon3;Parent=MS.gene32744.t1 |
| chr3.1 | CDS | 83227367 | 83227472 | 83227367 | ID=cds.MS.gene32744.t1;Parent=MS.gene32744.t1 |
| chr3.1 | exon | 83226931 | 83227187 | 83226931 | ID=MS.gene32744.t1.exon4;Parent=MS.gene32744.t1 |
| chr3.1 | CDS | 83226931 | 83227187 | 83226931 | ID=cds.MS.gene32744.t1;Parent=MS.gene32744.t1 |
| chr3.1 | exon | 83226670 | 83226801 | 83226670 | ID=MS.gene32744.t1.exon5;Parent=MS.gene32744.t1 |
| chr3.1 | CDS | 83226670 | 83226801 | 83226670 | ID=cds.MS.gene32744.t1;Parent=MS.gene32744.t1 |
| chr3.1 | exon | 83226318 | 83226428 | 83226318 | ID=MS.gene32744.t1.exon6;Parent=MS.gene32744.t1 |
| chr3.1 | CDS | 83226318 | 83226428 | 83226318 | ID=cds.MS.gene32744.t1;Parent=MS.gene32744.t1 |
| chr3.1 | exon | 83226025 | 83226153 | 83226025 | ID=MS.gene32744.t1.exon7;Parent=MS.gene32744.t1 |
| chr3.1 | CDS | 83226025 | 83226153 | 83226025 | ID=cds.MS.gene32744.t1;Parent=MS.gene32744.t1 |
| chr3.1 | exon | 83225463 | 83225680 | 83225463 | ID=MS.gene32744.t1.exon8;Parent=MS.gene32744.t1 |
| chr3.1 | CDS | 83225463 | 83225680 | 83225463 | ID=cds.MS.gene32744.t1;Parent=MS.gene32744.t1 |
| chr3.1 | exon | 83225225 | 83225378 | 83225225 | ID=MS.gene32744.t1.exon9;Parent=MS.gene32744.t1 |
| chr3.1 | CDS | 83225225 | 83225378 | 83225225 | ID=cds.MS.gene32744.t1;Parent=MS.gene32744.t1 |
| chr3.1 | exon | 83224878 | 83225096 | 83224878 | ID=MS.gene32744.t1.exon10;Parent=MS.gene32744.t1 |
| chr3.1 | CDS | 83224878 | 83225096 | 83224878 | ID=cds.MS.gene32744.t1;Parent=MS.gene32744.t1 |
| Gene Sequence |
| Protein sequence |
