AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene055804

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055804.t1 MTR_2g090390 98.473 393 6 0 1 393 38 430 0.0 813
MS.gene055804.t1 MTR_4g078230 71.320 394 110 2 1 393 37 428 0.0 589
MS.gene055804.t1 MTR_8g005670 47.989 373 191 2 4 376 64 433 1.37e-132 388
MS.gene055804.t1 MTR_7g073550 47.594 374 193 2 3 376 58 428 4.32e-131 384
MS.gene055804.t1 MTR_7g073550 47.594 374 193 2 3 376 59 429 4.46e-131 384
MS.gene055804.t1 MTR_7g073620 47.326 374 194 2 3 376 11 381 6.72e-131 382
MS.gene055804.t1 MTR_8g005270 47.185 373 194 2 4 376 47 416 4.79e-130 381
MS.gene055804.t1 MTR_8g006550 47.059 374 195 2 3 376 66 436 4.92e-130 382
MS.gene055804.t1 MTR_5g020890 47.594 374 192 2 2 375 30 399 8.45e-130 380
MS.gene055804.t1 MTR_4g043760 44.772 373 200 3 3 375 34 400 5.51e-125 367
MS.gene055804.t1 MTR_7g111740 45.767 378 196 4 2 379 61 429 1.05e-123 364
MS.gene055804.t1 MTR_1g085430 44.591 379 203 4 2 379 31 403 5.62e-122 359
MS.gene055804.t1 MTR_1g085310 44.974 378 202 4 2 379 28 399 2.72e-121 357
MS.gene055804.t1 MTR_1g085420 44.180 378 206 3 2 379 31 403 3.70e-120 354
MS.gene055804.t1 MTR_3g112060 43.799 379 202 5 3 379 26 395 4.40e-120 354
MS.gene055804.t1 MTR_1g085350 43.272 379 206 5 2 379 88 458 5.48e-115 343
MS.gene055804.t1 MTR_1g085320 41.361 382 198 6 1 379 29 387 4.95e-105 315
MS.gene055804.t1 MTR_0005s0150 42.667 300 166 3 76 375 8 301 3.93e-91 277
MS.gene055804.t1 MTR_7g073320 36.111 108 55 1 269 376 15 108 1.46e-15 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene055804.t1 AT2G20680 69.737 380 113 1 1 380 40 417 0.0 571
MS.gene055804.t1 AT4G28320 68.702 393 119 2 1 393 39 427 0.0 568
MS.gene055804.t1 AT5G01930 46.649 373 196 2 4 376 48 417 2.36e-128 377
MS.gene055804.t1 AT5G66460 45.722 374 197 3 2 375 30 397 5.60e-123 362
MS.gene055804.t1 AT3G10900 44.032 377 205 5 2 376 28 400 5.23e-122 359
MS.gene055804.t1 AT3G10890 42.520 381 212 5 2 380 30 405 9.16e-118 348
MS.gene055804.t1 AT1G02310 42.559 383 206 6 2 379 28 401 2.80e-111 332
MS.gene055804.t1 AT1G02310 42.559 383 206 6 2 379 48 421 4.11e-111 332
MS.gene055804.t1 AT3G30540 38.348 339 167 5 2 339 28 325 2.67e-84 260

Find 94 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTGAAAACTGGGGCTAATA+TGG 0.184464 2.1:+10590194 MS.gene055804:CDS
GAAATCAATATCAGAGATTT+TGG 0.195187 2.1:-10593445 None:intergenic
TGACCGTCAACCCCAATTAT+TGG 0.222691 2.1:+10593388 MS.gene055804:CDS
AAGTCTGGATGCCCAATAAT+TGG 0.233607 2.1:-10593400 None:intergenic
GAGGAATATTCTGATGATTA+TGG 0.283488 2.1:+10594069 MS.gene055804:CDS
TGAATGGGTGGAATTCTTAT+TGG 0.297092 2.1:+10590121 MS.gene055804:CDS
GACCGTCAACCCCAATTATT+GGG 0.317018 2.1:+10593389 MS.gene055804:CDS
TAGTTTGGCAATTCTTAGTT+GGG 0.322364 2.1:+10594040 MS.gene055804:CDS
GTCATTTCTATATTCAATTC+CGG 0.324364 2.1:-10592846 None:intergenic
GTTCGTCAAATGCTGAAAAC+TGG 0.331006 2.1:+10590183 MS.gene055804:CDS
TTGAAATAACTACGGATTGA+TGG 0.340488 2.1:-10591691 None:intergenic
CTGGAGCAGGCGCTTTAGTT+TGG 0.343911 2.1:+10594025 MS.gene055804:CDS
TTAGTTTGGCAATTCTTAGT+TGG 0.347632 2.1:+10594039 MS.gene055804:CDS
GGGTTGACGGTCAAATCCTT+TGG 0.352850 2.1:-10593378 None:intergenic
AAGCAAGGCAAAATGGAATT+AGG 0.360679 2.1:+10591551 MS.gene055804:CDS
GTGGAATTCTTATTGGTTGA+TGG 0.368784 2.1:+10590128 MS.gene055804:CDS
GTCAAATCCTTTGGGTCATT+AGG 0.369609 2.1:-10593369 None:intergenic
GGTCGGATACAGTGAAGTTC+TGG 0.372037 2.1:-10593942 None:intergenic
AGTCTGGATGCCCAATAATT+GGG 0.376159 2.1:-10593399 None:intergenic
TATAAAACAATCATGCAGAT+TGG 0.397992 2.1:+10594131 MS.gene055804:CDS
CCGGTCCTGTTCTCCGAATA+CGG 0.405166 2.1:+10593904 MS.gene055804:CDS
GGTTGACGGTCAAATCCTTT+GGG 0.409738 2.1:-10593377 None:intergenic
GACTCACTGTTTGTAGAACT+TGG 0.410613 2.1:+10590217 MS.gene055804:CDS
GTAAATAACTTGCAACCATA+TGG 0.414901 2.1:+10591589 MS.gene055804:CDS
AGCAATGCTTACCATTGATC+CGG 0.418166 2.1:-10593486 None:intergenic
CATTCCCCACGGTCAGCATA+TGG 0.420083 2.1:-10593332 None:intergenic
ATAGCAGAAGCAAGGCAAAA+TGG 0.422959 2.1:+10591544 MS.gene055804:CDS
ATAAAACAATCATGCAGATT+GGG 0.427620 2.1:+10594132 MS.gene055804:CDS
GAAGGGATGGATTAATCAAC+AGG 0.435221 2.1:+10594161 MS.gene055804:CDS
GATATAATCAGACCCAAGTC+TGG 0.436740 2.1:-10593415 None:intergenic
ATAATCCGTATTCGGAGAAC+AGG 0.448568 2.1:-10593909 None:intergenic
AGAACTTGGGCTTTCAATGA+TGG 0.449779 2.1:+10590231 MS.gene055804:CDS
TACTGACTCTTCCCACCATA+TGG 0.450859 2.1:-10591604 None:intergenic
TCAAATGGGCATGGCAAGAA+GGG 0.452269 2.1:+10591629 MS.gene055804:CDS
AATTATTGGGCATCCAGACT+TGG 0.454898 2.1:+10593402 MS.gene055804:CDS
ATCATAGAAGAACGAATCAT+TGG 0.455387 2.1:-10591668 None:intergenic
TGTGTTGATCGACTTTCCGC+TGG 0.459954 2.1:-10594099 None:intergenic
ATGCTGACCGTGGGGAATGA+AGG 0.467308 2.1:+10593336 MS.gene055804:CDS
TTCGTCAAATGCTGAAAACT+GGG 0.478082 2.1:+10590184 MS.gene055804:CDS
CTGAAAACTGGGGCTAATAT+GGG 0.484284 2.1:+10590195 MS.gene055804:CDS
GGAAGAGTCAGTATGTCAAA+TGG 0.484963 2.1:+10591614 MS.gene055804:CDS
GACTTGGGTCTGATTATATC+CGG 0.485591 2.1:+10593418 MS.gene055804:CDS
TTCATATCTACCCGGATCAA+TGG 0.488013 2.1:+10593475 MS.gene055804:CDS
AACTGAAATTTGTCAACAAG+TGG 0.489345 2.1:+10593839 MS.gene055804:CDS
TCTGCTAAGAGAAACAAGTC+TGG 0.492117 2.1:+10594006 MS.gene055804:CDS
GTCAAATGGGCATGGCAAGA+AGG 0.494866 2.1:+10591628 MS.gene055804:CDS
ATGCTTTCCCACATTGAAGA+TGG 0.497123 2.1:+10593862 MS.gene055804:CDS
ACTCACTGTTTGTAGAACTT+GGG 0.499364 2.1:+10590218 MS.gene055804:CDS
CGTTGCATGACTGATCGTTC+CGG 0.503031 2.1:+10592905 MS.gene055804:CDS
TGCCCAATAATTGGGGTTGA+CGG 0.509521 2.1:-10593391 None:intergenic
GCAAGTTATTTACTAAGCAA+AGG 0.522679 2.1:-10591579 None:intergenic
GGGACACAGTTTGTGTTGGA+TGG 0.524754 2.1:+10590084 MS.gene055804:CDS
ATTATTGGGCATCCAGACTT+GGG 0.530301 2.1:+10593403 MS.gene055804:CDS
TTTCCTGCAGGAGTGGATAG+AGG 0.531846 2.1:+10593275 MS.gene055804:intron
TGTAATTCTTGAAATAACTA+CGG 0.536027 2.1:-10591699 None:intergenic
AAGAGAAACAAGTCTGGAGC+AGG 0.538235 2.1:+10594012 MS.gene055804:CDS
GAAGAGTCAGTATGTCAAAT+GGG 0.540890 2.1:+10591615 MS.gene055804:CDS
CACCTCAGTTCATATCTACC+CGG 0.542770 2.1:+10593467 MS.gene055804:CDS
ACTTACTTGGAGAGTGTCGC+CGG 0.545828 2.1:-10592924 None:intergenic
AATAACTTGCAACCATATGG+TGG 0.566863 2.1:+10591592 MS.gene055804:CDS
TTATGGTCCTAATGACCCAA+AGG 0.573542 2.1:+10593362 MS.gene055804:CDS
TTATTTCAAGAATTACATCA+AGG 0.573575 2.1:+10591705 MS.gene055804:CDS
GATTGGGTAAAGCGAAGGGA+TGG 0.575120 2.1:+10594148 MS.gene055804:CDS
TTCTGCAGACTGTCTTGACA+AGG 0.576048 2.1:+10592810 MS.gene055804:intron
GTCAGTATGTCAAATGGGCA+TGG 0.579900 2.1:+10591620 MS.gene055804:CDS
AATGCTCTTCAAATTTCACC+TGG 0.579990 2.1:+10590261 MS.gene055804:CDS
GTGTTGATCGACTTTCCGCT+GGG 0.580201 2.1:-10594098 None:intergenic
GTTTGGCAATTCTTAGTTGG+GGG 0.582836 2.1:+10594042 MS.gene055804:CDS
ATGCAGATTGGGTAAAGCGA+AGG 0.584136 2.1:+10594143 MS.gene055804:CDS
TGGGCATGGCAAGAAGGGGT+AGG 0.584409 2.1:+10591634 MS.gene055804:CDS
AAATGGGACACAGTTTGTGT+TGG 0.586472 2.1:+10590080 MS.gene055804:CDS
ATAGAAGAACGAATCATTGG+AGG 0.587282 2.1:-10591665 None:intergenic
GCAATGCTTACCATTGATCC+GGG 0.587323 2.1:-10593485 None:intergenic
AGTTTGGCAATTCTTAGTTG+GGG 0.590382 2.1:+10594041 MS.gene055804:CDS
CCGTATTCGGAGAACAGGAC+CGG 0.591091 2.1:-10593904 None:intergenic
TTCATCGCCATCTTCAATGT+GGG 0.596395 2.1:-10593869 None:intergenic
GGACACAGTTTGTGTTGGAT+GGG 0.598899 2.1:+10590085 MS.gene055804:CDS
TGCAGATTGGGTAAAGCGAA+GGG 0.600343 2.1:+10594144 MS.gene055804:CDS
GTCTGGATGCCCAATAATTG+GGG 0.607898 2.1:-10593398 None:intergenic
CGATGAAGTACTGAAGAAGC+CGG 0.608266 2.1:+10593885 MS.gene055804:CDS
AAGAACCATATGCTGACCGT+GGG 0.609672 2.1:+10593327 MS.gene055804:CDS
ATAACTTGCAACCATATGGT+GGG 0.615616 2.1:+10591593 MS.gene055804:CDS
CTTCATCGCCATCTTCAATG+TGG 0.618456 2.1:-10593870 None:intergenic
ACTTGTTCATCAAAGTGACC+AGG 0.634282 2.1:-10590279 None:intergenic
GGAGTGGATAGAGGAAATGT+CGG 0.641246 2.1:+10593284 MS.gene055804:intron
ATTACGTCATAGCAGAAGCA+AGG 0.656346 2.1:+10591536 MS.gene055804:CDS
CAAATGGGCATGGCAAGAAG+GGG 0.658594 2.1:+10591630 MS.gene055804:CDS
ATAAAAGCCTTCATTCCCCA+CGG 0.670702 2.1:-10593343 None:intergenic
CAAGAACCATATGCTGACCG+TGG 0.671483 2.1:+10593326 MS.gene055804:CDS
TCGTCAAATGCTGAAAACTG+GGG 0.702936 2.1:+10590185 MS.gene055804:CDS
ATCCGGGTAGATATGAACTG+AGG 0.729379 2.1:-10593469 None:intergenic
TGATTATGGAATCGTCCCAG+CGG 0.733894 2.1:+10594083 MS.gene055804:CDS
GAACGATCAGTCATGCAACG+AGG 0.746364 2.1:-10592902 None:intergenic
AGAACCATATGCTGACCGTG+GGG 0.750263 2.1:+10593328 MS.gene055804:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTGAAATATATAATAAAATA+AGG + chr2.1:10593239-10593258 MS.gene055804:intron 10.0%
!! AAAATTAAGTACTTGAAATT+TGG - chr2.1:10591209-10591228 None:intergenic 15.0%
!! TAGAAAAAATGGATAAAATT+TGG - chr2.1:10593185-10593204 None:intergenic 15.0%
!! TCAATATCAAATAGAAAAAA+TGG - chr2.1:10593196-10593215 None:intergenic 15.0%
!! TTATAAACAATTATAATCAC+AGG - chr2.1:10590622-10590641 None:intergenic 15.0%
!! TTATTATATATTTCACAACA+TGG - chr2.1:10593235-10593254 None:intergenic 15.0%
!! TTTCTATTCTTCAAAAATAA+TGG - chr2.1:10591478-10591497 None:intergenic 15.0%
!!! ATTTAATAATACTTTTGTAC+TGG + chr2.1:10591911-10591930 MS.gene055804:intron 15.0%
!!! TTAATTATTACTTTTTGCAT+AGG + chr2.1:10593785-10593804 MS.gene055804:intron 15.0%
!!! TTTTTCTATAAACATTTGAA+GGG - chr2.1:10592967-10592986 None:intergenic 15.0%
!! AAAATGGTTAAATTCATGTT+TGG + chr2.1:10590771-10590790 MS.gene055804:intron 20.0%
!! AAGTAAAACATAAATCTCTA+AGG - chr2.1:10591248-10591267 None:intergenic 20.0%
!! AGTTATCATATGACAATTAA+AGG - chr2.1:10591887-10591906 None:intergenic 20.0%
!! TGTAATTCTTGAAATAACTA+CGG - chr2.1:10591702-10591721 None:intergenic 20.0%
!! TGTTTATAATAATGGTATCT+TGG + chr2.1:10590633-10590652 MS.gene055804:intron 20.0%
!! TTATTATTCTTAAACTCAGT+AGG + chr2.1:10591942-10591961 MS.gene055804:intron 20.0%
!! TTATTTCAAGAATTACATCA+AGG + chr2.1:10591705-10591724 MS.gene055804:CDS 20.0%
!!! ATACTTCTTTTACTCAATAA+AGG + chr2.1:10592374-10592393 MS.gene055804:intron 20.0%
!!! CATAAAAAACTAATTTGTGT+CGG - chr2.1:10590432-10590451 None:intergenic 20.0%
!!! CTAATTTTTTTTTTATGACC+AGG - chr2.1:10591360-10591379 None:intergenic 20.0%
!!! CTTTTTCTATAAACATTTGA+AGG - chr2.1:10592968-10592987 None:intergenic 20.0%
!!! TGACTTGTTTTTTGTTTTTT+GGG + chr2.1:10590470-10590489 MS.gene055804:intron 20.0%
!!! TTTTTTTGATAATCCGTATT+CGG - chr2.1:10593920-10593939 None:intergenic 20.0%
! AAAACTTTCTTTCCTTCAAT+CGG - chr2.1:10591398-10591417 None:intergenic 25.0%
! AACAACATGAAACAATGAAA+GGG - chr2.1:10590405-10590424 None:intergenic 25.0%
! ACATAATCAGAACAAATCAT+AGG - chr2.1:10590373-10590392 None:intergenic 25.0%
! AGAAGTAAGAAAAGGTTATA+AGG + chr2.1:10593662-10593681 MS.gene055804:intron 25.0%
! AGATACCTAGTTTATTAGTT+TGG - chr2.1:10590673-10590692 None:intergenic 25.0%
! ATAAAACAATCATGCAGATT+GGG + chr2.1:10594132-10594151 MS.gene055804:CDS 25.0%
! ATAGAAATTATGCTGAACTA+AGG + chr2.1:10591491-10591510 MS.gene055804:intron 25.0%
! GAAGATTGAATCAAATATAC+AGG + chr2.1:10592100-10592119 MS.gene055804:intron 25.0%
! GAAGTAAGAAAAGGTTATAA+GGG + chr2.1:10593663-10593682 MS.gene055804:intron 25.0%
! GTCATTTCTATATTCAATTC+CGG - chr2.1:10592849-10592868 None:intergenic 25.0%
! TATAAAACAATCATGCAGAT+TGG + chr2.1:10594131-10594150 MS.gene055804:CDS 25.0%
! TATAATAATGGTATCTTGGT+GGG + chr2.1:10590637-10590656 MS.gene055804:intron 25.0%
! TCAATGAAGCTTGAAAAATA+AGG - chr2.1:10592511-10592530 None:intergenic 25.0%
! TTATAATAATGGTATCTTGG+TGG + chr2.1:10590636-10590655 MS.gene055804:intron 25.0%
!! AAAACTTGTTTCCTTAAGTA+AGG - chr2.1:10592301-10592320 None:intergenic 25.0%
!! AAATTTCAAAGCACTTTGTT+AGG + chr2.1:10594188-10594207 MS.gene055804:CDS 25.0%
!! AATAAACTAGGTATCTTTTG+TGG + chr2.1:10590677-10590696 MS.gene055804:intron 25.0%
!! AATTTCAAAGCACTTTGTTA+GGG + chr2.1:10594189-10594208 MS.gene055804:CDS 25.0%
!! CTGACATAATGACTTTAAAA+AGG - chr2.1:10591847-10591866 None:intergenic 25.0%
!! GAAATCAATATCAGAGATTT+TGG - chr2.1:10593448-10593467 None:intergenic 25.0%
!! TACCTAGTAAACACAATTTT+AGG - chr2.1:10591049-10591068 None:intergenic 25.0%
!! TTACTTAAGGAAACAAGTTT+TGG + chr2.1:10592300-10592319 MS.gene055804:intron 25.0%
!! TTGTTTCATACATCTTTTCT+CGG - chr2.1:10593966-10593985 None:intergenic 25.0%
!!! GACTTGTTTTTTGTTTTTTG+GGG + chr2.1:10590471-10590490 MS.gene055804:intron 25.0%
!!! GTGACTTGTTTTTTGTTTTT+TGG + chr2.1:10590469-10590488 MS.gene055804:intron 25.0%
AAACTTTCTTTCCTTCAATC+GGG - chr2.1:10591397-10591416 None:intergenic 30.0%
AAAGTATGTGTTATGGGTAT+GGG + chr2.1:10593601-10593620 MS.gene055804:intron 30.0%
AACTCCTATGTCAGATAAAA+TGG - chr2.1:10592048-10592067 None:intergenic 30.0%
AACTGAAATTTGTCAACAAG+TGG + chr2.1:10593839-10593858 MS.gene055804:CDS 30.0%
AATAAAGGAGTAGTGAGAAA+GGG + chr2.1:10592389-10592408 MS.gene055804:intron 30.0%
AATTATGCTGAACTAAGGAT+TGG + chr2.1:10591496-10591515 MS.gene055804:intron 30.0%
AATTGTGTTTACTAGGTAGA+TGG + chr2.1:10591051-10591070 MS.gene055804:intron 30.0%
ACAACTGAATATGGCAAAAT+TGG + chr2.1:10593121-10593140 MS.gene055804:intron 30.0%
ACAAGGAAAAATTCTTTCAC+CGG + chr2.1:10592827-10592846 MS.gene055804:CDS 30.0%
AGCATTGCTTGAACTTTATA+AGG + chr2.1:10593500-10593519 MS.gene055804:intron 30.0%
AGTTATGTACTTGTTCCTTT+AGG + chr2.1:10590744-10590763 MS.gene055804:intron 30.0%
ATACGTAAGAAAACAGAAAG+TGG - chr2.1:10592574-10592593 None:intergenic 30.0%
ATCATAGAAGAACGAATCAT+TGG - chr2.1:10591671-10591690 None:intergenic 30.0%
ATGAAGAAGAAATTTGACCT+AGG - chr2.1:10592681-10592700 None:intergenic 30.0%
CAAAATTTCCACTATGAGTA+GGG + chr2.1:10593576-10593595 MS.gene055804:intron 30.0%
CAACAACATGAAACAATGAA+AGG - chr2.1:10590406-10590425 None:intergenic 30.0%
CATTTATGCTCAAAGTCATT+GGG + chr2.1:10593546-10593565 MS.gene055804:intron 30.0%
CTCCTAAAATTGTGTTTACT+AGG + chr2.1:10591044-10591063 MS.gene055804:intron 30.0%
GAGGAATATTCTGATGATTA+TGG + chr2.1:10594069-10594088 MS.gene055804:CDS 30.0%
GCAAGTTATTTACTAAGCAA+AGG - chr2.1:10591582-10591601 None:intergenic 30.0%
GTTATGTACTTGTTCCTTTA+GGG + chr2.1:10590745-10590764 MS.gene055804:intron 30.0%
TATGACCTAAACGGTAAAAA+AGG - chr2.1:10592154-10592173 None:intergenic 30.0%
TCATTTATGCTCAAAGTCAT+TGG + chr2.1:10593545-10593564 MS.gene055804:intron 30.0%
TTATGACCAGGAATTGAAAT+CGG - chr2.1:10591348-10591367 None:intergenic 30.0%
TTCTATAAACATTTGAAGGG+TGG - chr2.1:10592964-10592983 None:intergenic 30.0%
! AAAAGTATGTGTTATGGGTA+TGG + chr2.1:10593600-10593619 MS.gene055804:intron 30.0%
! AATTAAAGGCATACAACATG+TGG - chr2.1:10591873-10591892 None:intergenic 30.0%
! AATTTTGCCATATTCAGTTG+TGG - chr2.1:10593122-10593141 None:intergenic 30.0%
! AGGGTAAAAGTATGTGTTAT+GGG + chr2.1:10593595-10593614 MS.gene055804:intron 30.0%
! CTTTGATGAACAAGTTTTTC+AGG + chr2.1:10590287-10590306 MS.gene055804:CDS 30.0%
! GAACTTTTTAATCTCCTCAT+GGG - chr2.1:10593041-10593060 None:intergenic 30.0%
! GAATCAAATATACAGGCTTT+TGG + chr2.1:10592107-10592126 MS.gene055804:intron 30.0%
! GGAATGTGTTTTATGTGAAT+GGG + chr2.1:10590106-10590125 MS.gene055804:CDS 30.0%
! GTAAATAACTTGCAACCATA+TGG + chr2.1:10591589-10591608 MS.gene055804:CDS 30.0%
! TAGGGTAAAAGTATGTGTTA+TGG + chr2.1:10593594-10593613 MS.gene055804:intron 30.0%
! TGAACTTTTTAATCTCCTCA+TGG - chr2.1:10593042-10593061 None:intergenic 30.0%
! TTAACCATTTTCAACCCTAA+AGG - chr2.1:10590762-10590781 None:intergenic 30.0%
! TTAGTTTGGCAATTCTTAGT+TGG + chr2.1:10594039-10594058 MS.gene055804:CDS 30.0%
! TTCCCTTTTAGATTTGTCTT+CGG + chr2.1:10593747-10593766 MS.gene055804:intron 30.0%
! TTGAAATAACTACGGATTGA+TGG - chr2.1:10591694-10591713 None:intergenic 30.0%
AACATGCACTTGGTTAATTG+AGG + chr2.1:10590913-10590932 MS.gene055804:intron 35.0%
AAGCAAGGCAAAATGGAATT+AGG + chr2.1:10591551-10591570 MS.gene055804:CDS 35.0%
AAGGTTAAGAATTTGCGTGT+GGG - chr2.1:10592492-10592511 None:intergenic 35.0%
AATCAATTCCCAGCCAAAAA+TGG - chr2.1:10592876-10592895 None:intergenic 35.0%
AATGCTCTTCAAATTTCACC+TGG + chr2.1:10590261-10590280 MS.gene055804:CDS 35.0%
AATGTTGAAATCTTTCCTGC+AGG + chr2.1:10593263-10593282 MS.gene055804:intron 35.0%
ACACAAGCCATAGAAAACAT+AGG - chr2.1:10591968-10591987 None:intergenic 35.0%
ACCAAAACGTTAAAGGAAAC+AGG - chr2.1:10592547-10592566 None:intergenic 35.0%
ACTCACTGTTTGTAGAACTT+GGG + chr2.1:10590218-10590237 MS.gene055804:CDS 35.0%
AGAATCCTTCGTATTGAACT+TGG - chr2.1:10593158-10593177 None:intergenic 35.0%
AGGGACCAAACTAATAAACT+AGG + chr2.1:10590665-10590684 MS.gene055804:intron 35.0%
ATAGAAGAACGAATCATTGG+AGG - chr2.1:10591668-10591687 None:intergenic 35.0%
CAAGTGCATGTTTGAATTGA+CGG - chr2.1:10590905-10590924 None:intergenic 35.0%
CAATAAAGGAGTAGTGAGAA+AGG + chr2.1:10592388-10592407 MS.gene055804:intron 35.0%
CCAAAATTTCCACTATGAGT+AGG + chr2.1:10593575-10593594 MS.gene055804:intron 35.0%
CCAAAGATACAAGCTTCATA+TGG - chr2.1:10592654-10592673 None:intergenic 35.0%
CCATATGAAGCTTGTATCTT+TGG + chr2.1:10592651-10592670 MS.gene055804:intron 35.0%
CCTATGTTCTATGACCTAAA+CGG - chr2.1:10592163-10592182 None:intergenic 35.0%
CTATGTCAGATAAAATGGTC+TGG - chr2.1:10592043-10592062 None:intergenic 35.0%
CTGTGAAGCAAAGAATTAGA+CGG + chr2.1:10592442-10592461 MS.gene055804:intron 35.0%
GAAGAGTCAGTATGTCAAAT+GGG + chr2.1:10591615-10591634 MS.gene055804:CDS 35.0%
GATCTCTAATGAACTTGTCA+TGG + chr2.1:10593085-10593104 MS.gene055804:intron 35.0%
GGTAGAATACAGAGAAAAAG+TGG + chr2.1:10590956-10590975 MS.gene055804:intron 35.0%
GTAGATGGGAAAAATAGCAT+CGG - chr2.1:10592261-10592280 None:intergenic 35.0%
GTTTGAATTGACGGTGAATT+TGG - chr2.1:10590896-10590915 None:intergenic 35.0%
TAAGGTTAAGAATTTGCGTG+TGG - chr2.1:10592493-10592512 None:intergenic 35.0%
TAATATGTCCTTTATGACCG+AGG + chr2.1:10591267-10591286 MS.gene055804:intron 35.0%
TAGATGGGAAAAATAGCATC+GGG - chr2.1:10592260-10592279 None:intergenic 35.0%
TAGTCAGAGTCTAACGTTAT+CGG - chr2.1:10592189-10592208 None:intergenic 35.0%
TGAATGGGTGGAATTCTTAT+TGG + chr2.1:10590121-10590140 MS.gene055804:CDS 35.0%
TGAGTGTGATTATGTCTCAT+AGG + chr2.1:10590569-10590588 MS.gene055804:intron 35.0%
TGGGAAATTGACCCAAAAAA+CGG + chr2.1:10591136-10591155 MS.gene055804:intron 35.0%
TGGTGAAACCAAAACGTTAA+AGG - chr2.1:10592554-10592573 None:intergenic 35.0%
TTCGTCAAATGCTGAAAACT+GGG + chr2.1:10590184-10590203 MS.gene055804:CDS 35.0%
TTTCTCTCCACAACTGAATA+TGG + chr2.1:10593112-10593131 MS.gene055804:intron 35.0%
TTTCTGTTATACCCGATTGA+AGG + chr2.1:10591383-10591402 MS.gene055804:intron 35.0%
! AAAGGAAGAAAGGTATGCAT+TGG - chr2.1:10592468-10592487 None:intergenic 35.0%
! AATAACTTGCAACCATATGG+TGG + chr2.1:10591592-10591611 MS.gene055804:CDS 35.0%
! AATTGAGGTACCATTGTTTC+TGG + chr2.1:10590928-10590947 MS.gene055804:intron 35.0%
! ACCTGTTTCCTTTAACGTTT+TGG + chr2.1:10592543-10592562 MS.gene055804:intron 35.0%
! ACTAATATCCGAGTGTTGTT+GGG + chr2.1:10592205-10592224 MS.gene055804:intron 35.0%
! ACTCAGTCATGCACAATTTT+AGG - chr2.1:10590554-10590573 None:intergenic 35.0%
! ATAACTTGCAACCATATGGT+GGG + chr2.1:10591593-10591612 MS.gene055804:CDS 35.0%
! ATGTGTTTTATGTGAATGGG+TGG + chr2.1:10590109-10590128 MS.gene055804:CDS 35.0%
! ATTGAGGTACCATTGTTTCT+GGG + chr2.1:10590929-10590948 MS.gene055804:intron 35.0%
! ATTTTTCCCATCTACAAGAC+TGG + chr2.1:10592266-10592285 MS.gene055804:intron 35.0%
! CAGACCATTTTATCTGACAT+AGG + chr2.1:10592041-10592060 MS.gene055804:intron 35.0%
! GGGAATGTGTTTTATGTGAA+TGG + chr2.1:10590105-10590124 MS.gene055804:CDS 35.0%
! GTGGAATTCTTATTGGTTGA+TGG + chr2.1:10590128-10590147 MS.gene055804:CDS 35.0%
! GTTTGTAGCTCTTGATTTTC+TGG + chr2.1:10590326-10590345 MS.gene055804:intron 35.0%
! TAACCTTTTCTTACTTCTGC+AGG - chr2.1:10593660-10593679 None:intergenic 35.0%
! TACTTTTACCCTACTCATAG+TGG - chr2.1:10593587-10593606 None:intergenic 35.0%
! TTCATACATCTTTTCTCGGT+CGG - chr2.1:10593962-10593981 None:intergenic 35.0%
! TTTTGTCCATCATGAAACCT+GGG + chr2.1:10591117-10591136 MS.gene055804:intron 35.0%
!! ATGGGTTTTGTGATGAGAAA+TGG + chr2.1:10590063-10590082 MS.gene055804:CDS 35.0%
!! ATTATATGTTGACTCCCATG+AGG + chr2.1:10593024-10593043 MS.gene055804:intron 35.0%
!! CCTACTCATAGTGGAAATTT+TGG - chr2.1:10593578-10593597 None:intergenic 35.0%
!! CTCATAGTGGAAATTTTGGT+CGG - chr2.1:10593574-10593593 None:intergenic 35.0%
!! TGGGTTTTGTGATGAGAAAT+GGG + chr2.1:10590064-10590083 MS.gene055804:CDS 35.0%
!! TGTTCCTTTAGGGTTGAAAA+TGG + chr2.1:10590755-10590774 MS.gene055804:intron 35.0%
!!! AGGATGCTATTAGTTTTCGA+AGG - chr2.1:10592783-10592802 None:intergenic 35.0%
!!! CTTGTATCTTTGGTTTTCCT+AGG + chr2.1:10592661-10592680 MS.gene055804:intron 35.0%
!!! TATCAGAGATTTTGGAGTTC+CGG - chr2.1:10593440-10593459 None:intergenic 35.0%
!!! TGGTACCTTTTTTACCGTTT+AGG + chr2.1:10592146-10592165 MS.gene055804:intron 35.0%
AAATGGGACACAGTTTGTGT+TGG + chr2.1:10590080-10590099 MS.gene055804:CDS 40.0%
AAGAATTTGCGTGTGGGAAA+AGG - chr2.1:10592486-10592505 None:intergenic 40.0%
AAGTCTGGATGCCCAATAAT+TGG - chr2.1:10593403-10593422 None:intergenic 40.0%
AATTATTGGGCATCCAGACT+TGG + chr2.1:10593402-10593421 MS.gene055804:CDS 40.0%
AATTCCCAGCCAAAAATGGT+GGG - chr2.1:10592872-10592891 None:intergenic 40.0%
ACAGTCTGCAGAAAACTCAA+AGG - chr2.1:10592803-10592822 None:intergenic 40.0%
ACGCCGAAGACAAATCTAAA+AGG - chr2.1:10593753-10593772 None:intergenic 40.0%
ACGGTGAATTTGGCAAATTC+TGG - chr2.1:10590886-10590905 None:intergenic 40.0%
ACTTGTTCATCAAAGTGACC+AGG - chr2.1:10590282-10590301 None:intergenic 40.0%
AGAACTTGGGCTTTCAATGA+TGG + chr2.1:10590231-10590250 MS.gene055804:CDS 40.0%
AGCAATGCTTACCATTGATC+CGG - chr2.1:10593489-10593508 None:intergenic 40.0%
AGCATTTGCCAAAATCACAG+TGG - chr2.1:10590829-10590848 None:intergenic 40.0%
AGTCTGGATGCCCAATAATT+GGG - chr2.1:10593402-10593421 None:intergenic 40.0%
ATAAAAGCCTTCATTCCCCA+CGG - chr2.1:10593346-10593365 None:intergenic 40.0%
ATAATCCGTATTCGGAGAAC+AGG - chr2.1:10593912-10593931 None:intergenic 40.0%
ATAATGGTATCTTGGTGGGA+AGG + chr2.1:10590641-10590660 MS.gene055804:intron 40.0%
ATAGCAGAAGCAAGGCAAAA+TGG + chr2.1:10591544-10591563 MS.gene055804:CDS 40.0%
ATGCTTTCCCACATTGAAGA+TGG + chr2.1:10593862-10593881 MS.gene055804:CDS 40.0%
ATTACGTCATAGCAGAAGCA+AGG + chr2.1:10591536-10591555 MS.gene055804:CDS 40.0%
ATTATTGGGCATCCAGACTT+GGG + chr2.1:10593403-10593422 MS.gene055804:CDS 40.0%
ATTGACCCAAAAAACGGTGT+CGG + chr2.1:10591142-10591161 MS.gene055804:intron 40.0%
CAACCTGCAGAAGTAAGAAA+AGG + chr2.1:10593654-10593673 MS.gene055804:intron 40.0%
CAAGCTTCATATGGAAGTCA+TGG - chr2.1:10592645-10592664 None:intergenic 40.0%
CAATTTCCCAGGTTTCATGA+TGG - chr2.1:10591126-10591145 None:intergenic 40.0%
CCGTTTAGGTCATAGAACAT+AGG + chr2.1:10592160-10592179 MS.gene055804:intron 40.0%
CGCCGAAGACAAATCTAAAA+GGG - chr2.1:10593752-10593771 None:intergenic 40.0%
CGTCAATTCAAACATGCACT+TGG + chr2.1:10590903-10590922 MS.gene055804:intron 40.0%
CTCATAGGTCTTTGCAAAAG+TGG + chr2.1:10590584-10590603 MS.gene055804:intron 40.0%
CTGAAAACTGGGGCTAATAT+GGG + chr2.1:10590195-10590214 MS.gene055804:CDS 40.0%
GACTCACTGTTTGTAGAACT+TGG + chr2.1:10590217-10590236 MS.gene055804:CDS 40.0%
GACTTGGGTCTGATTATATC+CGG + chr2.1:10593418-10593437 MS.gene055804:CDS 40.0%
GATATAATCAGACCCAAGTC+TGG - chr2.1:10593418-10593437 None:intergenic 40.0%
GGAACTTGAGACCTTACTTA+AGG + chr2.1:10592287-10592306 MS.gene055804:intron 40.0%
GGAAGAGTCAGTATGTCAAA+TGG + chr2.1:10591614-10591633 MS.gene055804:CDS 40.0%
GGATCTGACAAGCAATATGT+TGG + chr2.1:10591072-10591091 MS.gene055804:intron 40.0%
GTCAAATCCTTTGGGTCATT+AGG - chr2.1:10593372-10593391 None:intergenic 40.0%
GTTCGTCAAATGCTGAAAAC+TGG + chr2.1:10590183-10590202 MS.gene055804:CDS 40.0%
TCGTCAAATGCTGAAAACTG+GGG + chr2.1:10590185-10590204 MS.gene055804:CDS 40.0%
TCTGCTAAGAGAAACAAGTC+TGG + chr2.1:10594006-10594025 MS.gene055804:CDS 40.0%
TGTCACCAAGTTCAATACGA+AGG + chr2.1:10593150-10593169 MS.gene055804:intron 40.0%
TTATGGTCCTAATGACCCAA+AGG + chr2.1:10593362-10593381 MS.gene055804:CDS 40.0%
TTATGTGTGAGTGTGTGTTG+TGG + chr2.1:10590447-10590466 MS.gene055804:intron 40.0%
TTCATATCTACCCGGATCAA+TGG + chr2.1:10593475-10593494 MS.gene055804:CDS 40.0%
TTCATCGCCATCTTCAATGT+GGG - chr2.1:10593872-10593891 None:intergenic 40.0%
! AAAGAGTGCACAAACTGAGT+AGG - chr2.1:10590530-10590549 None:intergenic 40.0%
! AAGAGTGCACAAACTGAGTA+GGG - chr2.1:10590529-10590548 None:intergenic 40.0%
! ACTAAGGATTGGTATGTGAC+AGG + chr2.1:10591507-10591526 MS.gene055804:intron 40.0%
! AGAAATGACCCCACCATTTT+TGG + chr2.1:10592860-10592879 MS.gene055804:CDS 40.0%
! CAAGTTCCAGTCTTGTAGAT+GGG - chr2.1:10592275-10592294 None:intergenic 40.0%
! CAGTAGGCCTATGTTTTCTA+TGG + chr2.1:10591958-10591977 MS.gene055804:intron 40.0%
! CTTTTGTCCATCATGAAACC+TGG + chr2.1:10591116-10591135 MS.gene055804:intron 40.0%
! CTTTTTGCATAGGTTTCACG+AGG + chr2.1:10593795-10593814 MS.gene055804:intron 40.0%
! GACTAATATCCGAGTGTTGT+TGG + chr2.1:10592204-10592223 MS.gene055804:intron 40.0%
! TCAAGTTCCAGTCTTGTAGA+TGG - chr2.1:10592276-10592295 None:intergenic 40.0%
! TTTTCGAAGGATAGCCTCAA+GGG - chr2.1:10592770-10592789 None:intergenic 40.0%
!! CAGGTTTCATGATGGACAAA+AGG - chr2.1:10591118-10591137 None:intergenic 40.0%
!! GAAGGGATGGATTAATCAAC+AGG + chr2.1:10594161-10594180 MS.gene055804:CDS 40.0%
!! GGTAAAAAAGGTACCATCAC+TGG - chr2.1:10592142-10592161 None:intergenic 40.0%
!! TGGAAGTGTTGTGAACTTCA+GGG + chr2.1:10591319-10591338 MS.gene055804:intron 40.0%
!!! AAACACCGACACCGTTTTTT+GGG - chr2.1:10591150-10591169 None:intergenic 40.0%
!!! ATTCTGTCGATTTTTCGTCG+CGG + chr2.1:10590154-10590173 MS.gene055804:CDS 40.0%
!!! GAAACAAGTTTTGGTGTCAC+TGG + chr2.1:10592309-10592328 MS.gene055804:intron 40.0%
!!! GTTTTTTGGGTCAATTTCCC+AGG - chr2.1:10591137-10591156 None:intergenic 40.0%
AAGAACCATATGCTGACCGT+GGG + chr2.1:10593327-10593346 MS.gene055804:CDS 45.0%
AAGAATGCCACTCCAACCAT+TGG - chr2.1:10591806-10591825 None:intergenic 45.0%
AGAGCTTACCCTCCTTTATG+GGG - chr2.1:10592237-10592256 None:intergenic 45.0%
ATCCGGGTAGATATGAACTG+AGG - chr2.1:10593472-10593491 None:intergenic 45.0%
ATGCAGATTGGGTAAAGCGA+AGG + chr2.1:10594143-10594162 MS.gene055804:CDS 45.0%
ATTCCCAGCCAAAAATGGTG+GGG - chr2.1:10592871-10592890 None:intergenic 45.0%
CAATTCCCAGCCAAAAATGG+TGG - chr2.1:10592873-10592892 None:intergenic 45.0%
CACCTCAGTTCATATCTACC+CGG + chr2.1:10593467-10593486 MS.gene055804:CDS 45.0%
CTACCACTTCCCAGAAACAA+TGG - chr2.1:10590941-10590960 None:intergenic 45.0%
CTTCATCGCCATCTTCAATG+TGG - chr2.1:10593873-10593892 None:intergenic 45.0%
GACCGTCAACCCCAATTATT+GGG + chr2.1:10593389-10593408 MS.gene055804:CDS 45.0%
GAGAGCTTACCCTCCTTTAT+GGG - chr2.1:10592238-10592257 None:intergenic 45.0%
GATTGGTATGTGACAGGCTT+TGG + chr2.1:10591513-10591532 MS.gene055804:intron 45.0%
GCAATGCTTACCATTGATCC+GGG - chr2.1:10593488-10593507 None:intergenic 45.0%
GCTGAAAACTGGGGCTAATA+TGG + chr2.1:10590194-10590213 MS.gene055804:CDS 45.0%
GGACACAGTTTGTGTTGGAT+GGG + chr2.1:10590085-10590104 MS.gene055804:CDS 45.0%
GGAGTGGATAGAGGAAATGT+CGG + chr2.1:10593284-10593303 MS.gene055804:intron 45.0%
GGGGAAAGGAGAAAGAGAAA+AGG - chr2.1:10591760-10591779 None:intergenic 45.0%
GGTTGACGGTCAAATCCTTT+GGG - chr2.1:10593380-10593399 None:intergenic 45.0%
GTCAGTATGTCAAATGGGCA+TGG + chr2.1:10591620-10591639 MS.gene055804:CDS 45.0%
GTCTGGATGCCCAATAATTG+GGG - chr2.1:10593401-10593420 None:intergenic 45.0%
GTTGTGCTACAGTTTCAGAG+TGG - chr2.1:10593638-10593657 None:intergenic 45.0%
TCAAATGGGCATGGCAAGAA+GGG + chr2.1:10591629-10591648 MS.gene055804:CDS 45.0%
TGAAATCTTTCCTGCAGGAG+TGG + chr2.1:10593268-10593287 MS.gene055804:intron 45.0%
TGACCGTCAACCCCAATTAT+TGG + chr2.1:10593388-10593407 MS.gene055804:CDS 45.0%
TGATTATGGAATCGTCCCAG+CGG + chr2.1:10594083-10594102 MS.gene055804:CDS 45.0%
TGCAGATTGGGTAAAGCGAA+GGG + chr2.1:10594144-10594163 MS.gene055804:CDS 45.0%
TGCCCAATAATTGGGGTTGA+CGG - chr2.1:10593394-10593413 None:intergenic 45.0%
TTCTGCAGACTGTCTTGACA+AGG + chr2.1:10592810-10592829 MS.gene055804:intron 45.0%
TTGGAAGTTGAGACCAGTGA+TGG + chr2.1:10592126-10592145 MS.gene055804:intron 45.0%
! AAGAGAAACAAGTCTGGAGC+AGG + chr2.1:10594012-10594031 MS.gene055804:CDS 45.0%
! CGATTTTTCGTCGCGGTTTA+AGG + chr2.1:10590161-10590180 MS.gene055804:CDS 45.0%
! GTGGGGAATGAAGGCTTTTA+TGG + chr2.1:10593345-10593364 MS.gene055804:CDS 45.0%
! GTTTTCGAAGGATAGCCTCA+AGG - chr2.1:10592771-10592790 None:intergenic 45.0%
!! CGATGAAGTACTGAAGAAGC+CGG + chr2.1:10593885-10593904 MS.gene055804:CDS 45.0%
!! GGAAGTGTTGTGAACTTCAG+GGG + chr2.1:10591320-10591339 MS.gene055804:intron 45.0%
!! GTACCATTGTTTCTGGGAAG+TGG + chr2.1:10590935-10590954 MS.gene055804:intron 45.0%
!! GTGGAAGTGTTGTGAACTTC+AGG + chr2.1:10591318-10591337 MS.gene055804:intron 45.0%
!! TACTGACTCTTCCCACCATA+TGG - chr2.1:10591607-10591626 None:intergenic 45.0%
!!! GAAACACCGACACCGTTTTT+TGG - chr2.1:10591151-10591170 None:intergenic 45.0%
!! ATTATAATTGTTTATAATAA+TGG + chr2.1:10590625-10590644 MS.gene055804:intron 5.0%
AATGCCACTCCAACCATTGG+AGG - chr2.1:10591803-10591822 None:intergenic 50.0%
ACATTTGAAGGGTGGATCGC+AGG - chr2.1:10592956-10592975 None:intergenic 50.0%
AGAACCATATGCTGACCGTG+GGG + chr2.1:10593328-10593347 MS.gene055804:CDS 50.0%
ATGCCACTCCAACCATTGGA+GGG - chr2.1:10591802-10591821 None:intergenic 50.0%
CAAATGGGCATGGCAAGAAG+GGG + chr2.1:10591630-10591649 MS.gene055804:CDS 50.0%
CAAGAACCATATGCTGACCG+TGG + chr2.1:10593326-10593345 MS.gene055804:CDS 50.0%
CGTTGCATGACTGATCGTTC+CGG + chr2.1:10592905-10592924 MS.gene055804:CDS 50.0%
CTCTATGTTTGCAGCCCTTG+AGG + chr2.1:10592753-10592772 MS.gene055804:intron 50.0%
GAACGATCAGTCATGCAACG+AGG - chr2.1:10592905-10592924 None:intergenic 50.0%
GATTGGGTAAAGCGAAGGGA+TGG + chr2.1:10594148-10594167 MS.gene055804:CDS 50.0%
GCGTGTGGGAAAAGGAAGAA+AGG - chr2.1:10592478-10592497 None:intergenic 50.0%
GGAGAGCTTACCCTCCTTTA+TGG - chr2.1:10592239-10592258 None:intergenic 50.0%
GGGACACAGTTTGTGTTGGA+TGG + chr2.1:10590084-10590103 MS.gene055804:CDS 50.0%
GGGTTGACGGTCAAATCCTT+TGG - chr2.1:10593381-10593400 None:intergenic 50.0%
GGTAAAGAGAAAGGGGGGAA+AGG - chr2.1:10591774-10591793 None:intergenic 50.0%
GGTCGGATACAGTGAAGTTC+TGG - chr2.1:10593945-10593964 None:intergenic 50.0%
GTCAAATGGGCATGGCAAGA+AGG + chr2.1:10591628-10591647 MS.gene055804:CDS 50.0%
TCGCAGGTGAAGGACTTACT+TGG - chr2.1:10592940-10592959 None:intergenic 50.0%
TGGCAAGCGATCTCTCTCTA+TGG + chr2.1:10590976-10590995 MS.gene055804:intron 50.0%
TTTCCTCTATCCACTCCTGC+AGG - chr2.1:10593281-10593300 None:intergenic 50.0%
TTTCCTGCAGGAGTGGATAG+AGG + chr2.1:10593275-10593294 MS.gene055804:intron 50.0%
! ATCCGAGTGTTGTTGGGAAG+AGG + chr2.1:10592211-10592230 MS.gene055804:intron 50.0%
! GTGTTGATCGACTTTCCGCT+GGG - chr2.1:10594101-10594120 None:intergenic 50.0%
! TGTGTTGATCGACTTTCCGC+TGG - chr2.1:10594102-10594121 None:intergenic 50.0%
!! ACAGCGTGCCACTGTGATTT+TGG + chr2.1:10590818-10590837 MS.gene055804:intron 50.0%
!! ACTTACTTGGAGAGTGTCGC+CGG - chr2.1:10592927-10592946 None:intergenic 50.0%
!! GGGGTACCGATTTCAATTCC+TGG + chr2.1:10591339-10591358 MS.gene055804:intron 50.0%
!!! ATGACCCCACCATTTTTGGC+TGG + chr2.1:10592864-10592883 MS.gene055804:CDS 50.0%
!!! TGACCCCACCATTTTTGGCT+GGG + chr2.1:10592865-10592884 MS.gene055804:CDS 50.0%
ACAGCAAGATTGCACCGCTG+CGG - chr2.1:10592426-10592445 None:intergenic 55.0%
AGGGCGTGGGGTAAAGAGAA+AGG - chr2.1:10591783-10591802 None:intergenic 55.0%
ATGCTGACCGTGGGGAATGA+AGG + chr2.1:10593336-10593355 MS.gene055804:CDS 55.0%
CAACCACTTGCGCTAGACCT+CGG - chr2.1:10591287-10591306 None:intergenic 55.0%
CATTCCCCACGGTCAGCATA+TGG - chr2.1:10593335-10593354 None:intergenic 55.0%
CCGGTCCTGTTCTCCGAATA+CGG + chr2.1:10593904-10593923 MS.gene055804:CDS 55.0%
CCGTATTCGGAGAACAGGAC+CGG - chr2.1:10593907-10593926 None:intergenic 55.0%
CGTGGGGTAAAGAGAAAGGG+GGG - chr2.1:10591779-10591798 None:intergenic 55.0%
CTGGAGCAGGCGCTTTAGTT+TGG + chr2.1:10594025-10594044 MS.gene055804:CDS 55.0%
GCGCTAGACCTCGGTCATAA+AGG - chr2.1:10591278-10591297 None:intergenic 55.0%
GCGTGGGGTAAAGAGAAAGG+GGG - chr2.1:10591780-10591799 None:intergenic 55.0%
GGAAGAGGCCCCATAAAGGA+GGG + chr2.1:10592226-10592245 MS.gene055804:intron 55.0%
GGCCTCTTCCCAACAACACT+CGG - chr2.1:10592216-10592235 None:intergenic 55.0%
GGCGTGGGGTAAAGAGAAAG+GGG - chr2.1:10591781-10591800 None:intergenic 55.0%
GGGCGTGGGGTAAAGAGAAA+GGG - chr2.1:10591782-10591801 None:intergenic 55.0%
GGTATCTTGGTGGGAAGGCA+GGG + chr2.1:10590646-10590665 MS.gene055804:intron 55.0%
GTTGGGAAGAGGCCCCATAA+AGG + chr2.1:10592222-10592241 MS.gene055804:intron 55.0%
TGGTATCTTGGTGGGAAGGC+AGG + chr2.1:10590645-10590664 MS.gene055804:intron 55.0%
TGTGTTATGGGTATGGGCGC+AGG + chr2.1:10593607-10593626 MS.gene055804:intron 55.0%
ACGCCCTCCAATGGTTGGAG+TGG + chr2.1:10591796-10591815 MS.gene055804:intron 60.0%
ACTCCAACCATTGGAGGGCG+TGG - chr2.1:10591797-10591816 None:intergenic 60.0%
CGAGGTCTAGCGCAAGTGGT+TGG + chr2.1:10591285-10591304 MS.gene055804:intron 60.0%
CTTTACCCCACGCCCTCCAA+TGG + chr2.1:10591787-10591806 MS.gene055804:intron 60.0%
GAAGGGTGGATCGCAGGTGA+AGG - chr2.1:10592950-10592969 None:intergenic 60.0%
GGGAAGAGGCCCCATAAAGG+AGG + chr2.1:10592225-10592244 MS.gene055804:intron 60.0%
GGGCTGAATCATCACCGCAG+CGG + chr2.1:10592409-10592428 MS.gene055804:intron 60.0%
TGACCGAGGTCTAGCGCAAG+TGG + chr2.1:10591281-10591300 MS.gene055804:intron 60.0%
TGGGCATGGCAAGAAGGGGT+AGG + chr2.1:10591634-10591653 MS.gene055804:CDS 60.0%
! AGTGGTTGGTGCGCAGTGTG+TGG + chr2.1:10591299-10591318 MS.gene055804:intron 60.0%
! CTCCAACCATTGGAGGGCGT+GGG - chr2.1:10591796-10591815 None:intergenic 60.0%
! TCCAACCATTGGAGGGCGTG+GGG - chr2.1:10591795-10591814 None:intergenic 60.0%
ACCCCACGCCCTCCAATGGT+TGG + chr2.1:10591791-10591810 MS.gene055804:intron 65.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 10590063 10594209 10590063 ID=MS.gene055804
chr2.1 mRNA 10590063 10594209 10590063 ID=MS.gene055804.t1;Parent=MS.gene055804
chr2.1 exon 10590063 10590308 10590063 ID=MS.gene055804.t1.exon1;Parent=MS.gene055804.t1
chr2.1 CDS 10590063 10590308 10590063 ID=cds.MS.gene055804.t1;Parent=MS.gene055804.t1
chr2.1 exon 10591529 10591726 10591529 ID=MS.gene055804.t1.exon2;Parent=MS.gene055804.t1
chr2.1 CDS 10591529 10591726 10591529 ID=cds.MS.gene055804.t1;Parent=MS.gene055804.t1
chr2.1 exon 10592818 10592940 10592818 ID=MS.gene055804.t1.exon3;Parent=MS.gene055804.t1
chr2.1 CDS 10592818 10592940 10592818 ID=cds.MS.gene055804.t1;Parent=MS.gene055804.t1
chr2.1 exon 10593285 10593496 10593285 ID=MS.gene055804.t1.exon4;Parent=MS.gene055804.t1
chr2.1 CDS 10593285 10593496 10593285 ID=cds.MS.gene055804.t1;Parent=MS.gene055804.t1
chr2.1 exon 10593807 10594209 10593807 ID=MS.gene055804.t1.exon5;Parent=MS.gene055804.t1
chr2.1 CDS 10593807 10594209 10593807 ID=cds.MS.gene055804.t1;Parent=MS.gene055804.t1
Gene Sequence

>MS.gene055804

ATGGGTTTTGTGATGAGAAATGGGACACAGTTTGTGTTGGATGGGAATGTGTTTTATGTGAATGGGTGGAATTCTTATTGGTTGATGGATCATTCTGTCGATTTTTCGTCGCGGTTTAAGGTTCGTCAAATGCTGAAAACTGGGGCTAATATGGGACTCACTGTTTGTAGAACTTGGGCTTTCAATGATGGTCATTATAATGCTCTTCAAATTTCACCTGGTCACTTTGATGAACAAGTTTTTCAGGTATTGTTTGTTTTGTTGTTTGTAGCTCTTGATTTTCTGGTAATTTTATAACTTTGTTGTTCCTATGATTTGTTCTGATTATGTTTTTGTGTGCCCTTTCATTGTTTCATGTTGTTGCTACCGACACAAATTAGTTTTTTATGTGTGAGTGTGTGTTGTGGTGACTTGTTTTTTGTTTTTTGGGGTTTACTTTTCAATTTTCATTGAATTTTTTATTCCCTACTCAGTTTGTGCACTCTTTTCCTAAAATTGTGCATGACTGAGTGTGATTATGTCTCATAGGTCTTTGCAAAAGTGGTAATAATAATAGCCTGTGATTATAATTGTTTATAATAATGGTATCTTGGTGGGAAGGCAGGGACCAAACTAATAAACTAGGTATCTTTTGTGGAAATAATTATCTAATGTTGTGATAGTTCTAAAAAGTGATGTAATAGTTATGTACTTGTTCCTTTAGGGTTGAAAATGGTTAAATTCATGTTTGGATTGATAGTGAGTTTAGCATAATTACAGCGTGCCACTGTGATTTTGGCAAATGCTATACTTTGCATCTTCAAAAAAGATTACATAGACACCAGAATTTGCCAAATTCACCGTCAATTCAAACATGCACTTGGTTAATTGAGGTACCATTGTTTCTGGGAAGTGGTAGAATACAGAGAAAAAGTGGCAAGCGATCTCTCTCTATGGTCAGCATCTAAGTGTAATCAATTAGAAGATTGTTCTTTTCTTGTGCTCCTAAAATTGTGTTTACTAGGTAGATGGATCTGACAAGCAATATGTTGGACTTTTGTTATTCTTCTTGTCCTTTTGTCCATCATGAAACCTGGGAAATTGACCCAAAAAACGGTGTCGGTGTTTCTGTCTTCTGACTAAAATCAATTTATGAACGAAAAACCAAATTTCAAGTACTTAATTTTTGCAAACGTCAGAGTACCTTAGAGATTTATGTTTTACTTAATATGTCCTTTATGACCGAGGTCTAGCGCAAGTGGTTGGTGCGCAGTGTGTGGAAGTGTTGTGAACTTCAGGGGTACCGATTTCAATTCCTGGTCATAAAAAAAAAATTAGTCATTTCTGTTATACCCGATTGAAGGAAAGAAAGTTTTTATGTTCGATTACTGCAGTGTAATTCTTTTTGCTTGTGCAATTAGTTGTTTCGTTTACCATTATTTTTGAAGAATAGAAATTATGCTGAACTAAGGATTGGTATGTGACAGGCTTTGGATTACGTCATAGCAGAAGCAAGGCAAAATGGAATTAGGCTGCTCCTTTGCTTAGTAAATAACTTGCAACCATATGGTGGGAAGAGTCAGTATGTCAAATGGGCATGGCAAGAAGGGGTAGGATTAAGCGCCTCCAATGATTCGTTCTTCTATGATCCATCAATCCGTAGTTATTTCAAGAATTACATCAAGGTATGACATGTTTGTCTGTCTATATATCTACCTTTTCTCTTTCTCCTTTCCCCCCTTTCTCTTTACCCCACGCCCTCCAATGGTTGGAGTGGCATTCTTATGTGCTAAGATTAATTTCCTTTTTAAAGTCATTATGTCAGATTCCACATGTTGTATGCCTTTAATTGTCATATGATAACTTTAGATTTAATAATACTTTTGTACTGGTATGTTTCTTATTATTCTTAAACTCAGTAGGCCTATGTTTTCTATGGCTTGTGTTGTAAGCATTGTATACAGCAAGACAAGTAGTTTGCATGTATTTCTCTGCTGACCAGACCATTTTATCTGACATAGGAGTTACATTTGTTGTTCTTCTCTTCTTTTTCTTTTTGAAGATTGAATCAAATATACAGGCTTTTGGAAGTTGAGACCAGTGATGGTACCTTTTTTACCGTTTAGGTCATAGAACATAGGTCTCCGATAACGTTAGACTCTGACTAATATCCGAGTGTTGTTGGGAAGAGGCCCCATAAAGGAGGGTAAGCTCTCCCGATGCTATTTTTCCCATCTACAAGACTGGAACTTGAGACCTTACTTAAGGAAACAAGTTTTGGTGTCACTGGCATCTTAATGAAAGAATATTCAGTCAGTTGCTAATTGAATGTATACTTCTTTTACTCAATAAAGGAGTAGTGAGAAAGGGCTGAATCATCACCGCAGCGGTGCAATCTTGCTGTGAAGCAAAGAATTAGACGGCCAATGCATACCTTTCTTCCTTTTCCCACACGCAAATTCTTAACCTTATTTTTCAAGCTTCATTGAATATATCTTCTGACCTGTTTCCTTTAACGTTTTGGTTTCACCACTTTCTGTTTTCTTACGTATAACAAACTGACAACTTATAGAATGCTTTACACTTCTCTAGCATGTGATCCATGACTTCCATATGAAGCTTGTATCTTTGGTTTTCCTAGGTCAAATTTCTTCTTCATTTACTTGCTAAATCAATGTATATGACTTTTTAACTGTGCACTTCAGTTTTCGCTCTATGTTTGCAGCCCTTGAGGCTATCCTTCGAAAACTAATAGCATCCTTTGAGTTTTCTGCAGACTGTCTTGACAAGGAAAAATTCTTTCACCGGAATTGAATATAGAAATGACCCCACCATTTTTGGCTGGGAATTGATTAATGAGCCTCGTTGCATGACTGATCGTTCCGGCGACACTCTCCAAGTAAGTCCTTCACCTGCGATCCACCCTTCAAATGTTTATAGAAAAAGAAGATTTTGCAAGTAATCACTTCAAAAATCATAATAATTATATGTTGACTCCCATGAGGAGATTAAAAAGTTCAAATTTCTATATTAAAACATTTATGATCTCTAATGAACTTGTCATGGTTGTTTTCTCTCCACAACTGAATATGGCAAAATTGGCAGAGTTGTCACCAAGTTCAATACGAAGGATTCTTTATCCAAATTTTATCCATTTTTTCTATTTGATATTGATACTGCAAGTTTTAGTCCATGTTGTGAAATATATAATAAAATAAGGAAATGTTGAAATCTTTCCTGCAGGAGTGGATAGAGGAAATGTCGGCTTTTGTGAAATTGATTGACAAGAACCATATGCTGACCGTGGGGAATGAAGGCTTTTATGGTCCTAATGACCCAAAGGATTTGACCGTCAACCCCAATTATTGGGCATCCAGACTTGGGTCTGATTATATCCGGAACTCCAAAATCTCTGATATTGATTTCACCTCAGTTCATATCTACCCGGATCAATGGTAAGCATTGCTTGAACTTTATAAGGTTTTCTTGTGAGTTTTTCATGTTCATTTATGCTCAAAGTCATTGGGTACCGACCAAAATTTCCACTATGAGTAGGGTAAAAGTATGTGTTATGGGTATGGGCGCAGGTATTTCCACTCTGAAACTGTAGCACAACCTGCAGAAGTAAGAAAAGGTTATAAGGGTTTCATATGAGTTTTTCATGTTCAACTGATTAACTAGTGCAAGAGTTTTAAAAATTATCTGTTCCCTTTTAGATTTGTCTTCGGCGTGTATTTCTTGTTTTAATTATTACTTTTTGCATAGGTTTCACGAGGATGAGAAAGCAATTGAAACTCAACTGAAATTTGTCAACAAGTGGATGCTTTCCCACATTGAAGATGGCGATGAAGTACTGAAGAAGCCGGTCCTGTTCTCCGAATACGGATTATCAAAAAAAAACCAGAACTTCACTGTATCCGACCGAGAAAAGATGTATGAAACAATTTTAAACATCGTTTACAAATCTGCTAAGAGAAACAAGTCTGGAGCAGGCGCTTTAGTTTGGCAATTCTTAGTTGGGGGAATGGAGGAATATTCTGATGATTATGGAATCGTCCCAGCGGAAAGTCGATCAACACAATCGCTATTTATAAAACAATCATGCAGATTGGGTAAAGCGAAGGGATGGATTAATCAACAGGATGTAAATTTCAAAGCACTTTGTTAG
Protein sequence

>MS.gene055804.t1

MGFVMRNGTQFVLDGNVFYVNGWNSYWLMDHSVDFSSRFKVRQMLKTGANMGLTVCRTWAFNDGHYNALQISPGHFDEQVFQALDYVIAEARQNGIRLLLCLVNNLQPYGGKSQYVKWAWQEGVGLSASNDSFFYDPSIRSYFKNYIKTVLTRKNSFTGIEYRNDPTIFGWELINEPRCMTDRSGDTLQEWIEEMSAFVKLIDKNHMLTVGNEGFYGPNDPKDLTVNPNYWASRLGSDYIRNSKISDIDFTSVHIYPDQWFHEDEKAIETQLKFVNKWMLSHIEDGDEVLKKPVLFSEYGLSKKNQNFTVSDREKMYETILNIVYKSAKRNKSGAGALVWQFLVGGMEEYSDDYGIVPAESRSTQSLFIKQSCRLGKAKGWINQQDVNFKALC