Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33493.t1 | XP_003604643.1 | 93.9 | 262 | 14 | 2 | 1 | 260 | 245 | 506 | 3.80E-141 | 510.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33493.t1 | B8AVF0 | 55.1 | 254 | 102 | 4 | 2 | 253 | 265 | 508 | 1.1e-72 | 274.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33493.t1 | A8TVQ0 | 93.9 | 262 | 14 | 2 | 1 | 260 | 245 | 506 | 2.8e-141 | 510.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04932 | MS.gene33493 | 0.819898 | 9.12E-53 | -1.69E-46 |
| MS.gene05240 | MS.gene33493 | 0.820947 | 5.24E-53 | -1.69E-46 |
| MS.gene052702 | MS.gene33493 | 0.808512 | 2.99E-50 | -1.69E-46 |
| MS.gene054181 | MS.gene33493 | 0.816808 | 4.57E-52 | -1.69E-46 |
| MS.gene054742 | MS.gene33493 | 0.806035 | 1.00E-49 | -1.69E-46 |
| MS.gene056697 | MS.gene33493 | 0.803134 | 4.03E-49 | -1.69E-46 |
| MS.gene056920 | MS.gene33493 | 0.803879 | 2.82E-49 | -1.69E-46 |
| MS.gene057261 | MS.gene33493 | 0.815506 | 8.93E-52 | -1.69E-46 |
| MS.gene057544 | MS.gene33493 | 0.826165 | 3.15E-54 | -1.69E-46 |
| MS.gene059402 | MS.gene33493 | 0.818399 | 2.00E-52 | -1.69E-46 |
| MS.gene059955 | MS.gene33493 | 0.813498 | 2.48E-51 | -1.69E-46 |
| MS.gene060087 | MS.gene33493 | 0.801419 | 9.08E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33493.t1 | MTR_4g015460 | 93.893 | 262 | 14 | 2 | 1 | 260 | 245 | 506 | 1.87e-179 | 503 |
| MS.gene33493.t1 | MTR_4g015420 | 82.422 | 256 | 43 | 1 | 1 | 254 | 269 | 524 | 2.42e-155 | 443 |
| MS.gene33493.t1 | MTR_2g043200 | 65.354 | 254 | 84 | 1 | 1 | 254 | 269 | 518 | 1.77e-114 | 338 |
| MS.gene33493.t1 | MTR_4g066330 | 66.797 | 256 | 75 | 5 | 1 | 254 | 245 | 492 | 4.24e-112 | 332 |
| MS.gene33493.t1 | MTR_4g066280 | 64.844 | 256 | 80 | 6 | 1 | 254 | 245 | 492 | 7.65e-108 | 320 |
| MS.gene33493.t1 | MTR_2g098520 | 59.922 | 257 | 91 | 4 | 1 | 255 | 264 | 510 | 5.74e-102 | 306 |
| MS.gene33493.t1 | MTR_2g098540 | 58.755 | 257 | 94 | 4 | 1 | 255 | 217 | 463 | 1.42e-98 | 296 |
| MS.gene33493.t1 | MTR_2g098540 | 58.755 | 257 | 94 | 4 | 1 | 255 | 261 | 507 | 2.36e-98 | 297 |
| MS.gene33493.t1 | MTR_2g098790 | 58.984 | 256 | 93 | 5 | 1 | 254 | 268 | 513 | 5.80e-98 | 296 |
| MS.gene33493.t1 | MTR_4g066340 | 56.589 | 258 | 100 | 4 | 1 | 256 | 193 | 440 | 7.60e-96 | 288 |
| MS.gene33493.t1 | MTR_3g028720 | 56.863 | 255 | 98 | 4 | 2 | 254 | 269 | 513 | 2.08e-92 | 282 |
| MS.gene33493.t1 | MTR_4g066240 | 53.101 | 258 | 109 | 3 | 1 | 256 | 266 | 513 | 1.04e-91 | 280 |
| MS.gene33493.t1 | MTR_6g078330 | 55.385 | 260 | 104 | 4 | 1 | 258 | 163 | 412 | 2.51e-91 | 276 |
| MS.gene33493.t1 | MTR_6g078330 | 55.385 | 260 | 104 | 4 | 1 | 258 | 163 | 412 | 3.15e-91 | 276 |
| MS.gene33493.t1 | MTR_4g066210 | 54.688 | 256 | 104 | 5 | 1 | 254 | 273 | 518 | 3.24e-91 | 279 |
| MS.gene33493.t1 | MTR_4g066580 | 55.469 | 256 | 102 | 4 | 1 | 254 | 269 | 514 | 6.52e-91 | 278 |
| MS.gene33493.t1 | MTR_6g078330 | 55.385 | 260 | 104 | 4 | 1 | 258 | 267 | 516 | 4.89e-90 | 276 |
| MS.gene33493.t1 | MTR_4g066240 | 52.896 | 259 | 109 | 4 | 1 | 256 | 266 | 514 | 4.91e-90 | 276 |
| MS.gene33493.t1 | MTR_4g066590 | 55.686 | 255 | 101 | 4 | 1 | 253 | 263 | 507 | 2.73e-89 | 274 |
| MS.gene33493.t1 | MTR_5g071520 | 54.373 | 263 | 96 | 4 | 1 | 255 | 278 | 524 | 5.10e-88 | 271 |
| MS.gene33493.t1 | MTR_6g078450 | 52.692 | 260 | 111 | 3 | 1 | 258 | 266 | 515 | 6.82e-88 | 270 |
| MS.gene33493.t1 | MTR_4g066640 | 53.101 | 258 | 108 | 5 | 2 | 256 | 267 | 514 | 2.20e-84 | 261 |
| MS.gene33493.t1 | MTR_4g066630 | 52.549 | 255 | 109 | 3 | 1 | 253 | 269 | 513 | 3.30e-84 | 261 |
| MS.gene33493.t1 | MTR_6g078380 | 54.054 | 259 | 108 | 3 | 2 | 258 | 267 | 516 | 2.31e-80 | 251 |
| MS.gene33493.t1 | MTR_4g023000 | 51.562 | 256 | 105 | 6 | 2 | 254 | 254 | 493 | 1.95e-74 | 235 |
| MS.gene33493.t1 | MTR_3g026280 | 49.805 | 257 | 112 | 5 | 1 | 255 | 252 | 493 | 4.53e-73 | 231 |
| MS.gene33493.t1 | MTR_3g026400 | 45.669 | 254 | 125 | 3 | 2 | 253 | 234 | 476 | 3.06e-67 | 216 |
| MS.gene33493.t1 | MTR_3g026400 | 45.669 | 254 | 125 | 3 | 2 | 253 | 265 | 507 | 5.14e-67 | 216 |
| MS.gene33493.t1 | MTR_3g026620 | 45.669 | 254 | 125 | 5 | 2 | 253 | 266 | 508 | 9.04e-67 | 215 |
| MS.gene33493.t1 | MTR_4g083000 | 42.412 | 257 | 134 | 4 | 2 | 254 | 162 | 408 | 7.02e-65 | 208 |
| MS.gene33493.t1 | MTR_4g083000 | 42.412 | 257 | 134 | 4 | 2 | 254 | 256 | 502 | 3.68e-64 | 208 |
| MS.gene33493.t1 | MTR_3g028720 | 54.726 | 201 | 79 | 4 | 2 | 200 | 269 | 459 | 8.06e-63 | 204 |
| MS.gene33493.t1 | MTR_4g081530 | 43.629 | 259 | 129 | 5 | 2 | 254 | 252 | 499 | 2.90e-62 | 204 |
| MS.gene33493.t1 | MTR_5g044000 | 41.634 | 257 | 135 | 5 | 2 | 253 | 274 | 520 | 3.73e-62 | 204 |
| MS.gene33493.t1 | MTR_3g033790 | 41.961 | 255 | 134 | 4 | 2 | 254 | 238 | 480 | 1.69e-60 | 199 |
| MS.gene33493.t1 | MTR_4g131810 | 40.784 | 255 | 138 | 5 | 2 | 253 | 259 | 503 | 3.24e-58 | 193 |
| MS.gene33493.t1 | MTR_6g078450 | 50.495 | 202 | 88 | 3 | 1 | 200 | 266 | 457 | 2.34e-57 | 189 |
| MS.gene33493.t1 | MTR_3g033810 | 40.392 | 255 | 139 | 5 | 2 | 254 | 240 | 483 | 8.70e-56 | 186 |
| MS.gene33493.t1 | MTR_2g022760 | 39.922 | 258 | 144 | 5 | 2 | 257 | 162 | 410 | 4.50e-55 | 182 |
| MS.gene33493.t1 | MTR_2g022710 | 38.783 | 263 | 147 | 7 | 2 | 260 | 162 | 414 | 9.42e-55 | 182 |
| MS.gene33493.t1 | MTR_2g022760 | 39.922 | 258 | 144 | 5 | 2 | 257 | 265 | 513 | 3.40e-54 | 182 |
| MS.gene33493.t1 | MTR_4g066630 | 48.259 | 201 | 92 | 3 | 1 | 199 | 269 | 459 | 4.29e-54 | 181 |
| MS.gene33493.t1 | MTR_2g022710 | 38.783 | 263 | 147 | 7 | 2 | 260 | 263 | 515 | 7.09e-54 | 182 |
| MS.gene33493.t1 | MTR_0110s0040 | 42.529 | 261 | 129 | 8 | 2 | 257 | 270 | 514 | 3.05e-53 | 180 |
| MS.gene33493.t1 | MTR_0110s0030 | 39.922 | 258 | 140 | 6 | 2 | 257 | 270 | 514 | 3.80e-51 | 174 |
| MS.gene33493.t1 | MTR_4g131800 | 40.310 | 258 | 143 | 5 | 2 | 257 | 744 | 992 | 1.30e-50 | 178 |
| MS.gene33493.t1 | MTR_2g079580 | 38.431 | 255 | 143 | 6 | 2 | 253 | 260 | 503 | 1.34e-50 | 173 |
| MS.gene33493.t1 | MTR_7g051650 | 37.354 | 257 | 141 | 7 | 1 | 253 | 292 | 532 | 2.47e-48 | 167 |
| MS.gene33493.t1 | MTR_7g051650 | 37.354 | 257 | 141 | 7 | 1 | 253 | 288 | 528 | 2.50e-48 | 167 |
| MS.gene33493.t1 | MTR_2g079550 | 37.255 | 255 | 146 | 6 | 2 | 253 | 258 | 501 | 3.14e-48 | 167 |
| MS.gene33493.t1 | MTR_7g033860 | 37.308 | 260 | 141 | 6 | 2 | 256 | 272 | 514 | 7.29e-48 | 166 |
| MS.gene33493.t1 | MTR_0108s0030 | 37.891 | 256 | 126 | 5 | 2 | 256 | 228 | 451 | 3.16e-47 | 163 |
| MS.gene33493.t1 | MTR_7g051610 | 36.576 | 257 | 146 | 5 | 2 | 256 | 293 | 534 | 6.80e-47 | 164 |
| MS.gene33493.t1 | MTR_7g051510 | 35.968 | 253 | 147 | 5 | 2 | 253 | 293 | 531 | 9.08e-47 | 163 |
| MS.gene33493.t1 | MTR_7g056747 | 33.205 | 259 | 144 | 4 | 1 | 258 | 172 | 402 | 8.51e-44 | 153 |
| MS.gene33493.t1 | MTR_3g028720 | 51.497 | 167 | 69 | 4 | 2 | 166 | 269 | 425 | 9.77e-44 | 153 |
| MS.gene33493.t1 | MTR_4g066580 | 50.000 | 168 | 72 | 4 | 1 | 166 | 269 | 426 | 1.85e-42 | 150 |
| MS.gene33493.t1 | MTR_4g016920 | 35.686 | 255 | 141 | 5 | 2 | 253 | 162 | 396 | 1.26e-38 | 139 |
| MS.gene33493.t1 | MTR_4g016920 | 35.686 | 255 | 141 | 5 | 2 | 253 | 255 | 489 | 4.31e-38 | 140 |
| MS.gene33493.t1 | MTR_4g066240 | 42.941 | 170 | 85 | 3 | 1 | 168 | 266 | 425 | 5.81e-38 | 138 |
| MS.gene33493.t1 | MTR_5g068740 | 32.171 | 258 | 154 | 4 | 2 | 257 | 254 | 492 | 1.37e-37 | 138 |
| MS.gene33493.t1 | MTR_4g066630 | 45.783 | 166 | 78 | 3 | 1 | 164 | 269 | 424 | 8.27e-37 | 135 |
| MS.gene33493.t1 | MTR_7g068910 | 32.941 | 255 | 150 | 5 | 2 | 254 | 269 | 504 | 4.40e-36 | 134 |
| MS.gene33493.t1 | MTR_7g068910 | 32.941 | 255 | 150 | 5 | 2 | 254 | 259 | 494 | 4.76e-36 | 134 |
| MS.gene33493.t1 | MTR_1g088610 | 31.765 | 255 | 152 | 4 | 2 | 254 | 254 | 488 | 3.92e-35 | 132 |
| MS.gene33493.t1 | MTR_1g088610 | 39.167 | 120 | 66 | 2 | 139 | 257 | 503 | 616 | 1.20e-19 | 88.6 |
| MS.gene33493.t1 | MTR_7g068900 | 33.591 | 259 | 144 | 6 | 2 | 254 | 183 | 419 | 8.40e-35 | 130 |
| MS.gene33493.t1 | MTR_4g067040 | 44.805 | 154 | 73 | 4 | 1 | 152 | 264 | 407 | 2.19e-31 | 120 |
| MS.gene33493.t1 | MTR_2g022710 | 34.653 | 202 | 120 | 5 | 2 | 200 | 263 | 455 | 4.20e-29 | 114 |
| MS.gene33493.t1 | MTR_2g022710 | 34.653 | 202 | 120 | 5 | 2 | 200 | 263 | 455 | 4.94e-29 | 114 |
| MS.gene33493.t1 | MTR_1g088630 | 30.973 | 226 | 133 | 5 | 34 | 257 | 231 | 435 | 3.37e-27 | 109 |
| MS.gene33493.t1 | MTR_3g028720 | 56.667 | 90 | 38 | 1 | 2 | 90 | 269 | 358 | 1.68e-26 | 106 |
| MS.gene33493.t1 | MTR_4g067040 | 54.839 | 93 | 41 | 1 | 1 | 92 | 264 | 356 | 3.17e-25 | 103 |
| MS.gene33493.t1 | MTR_2g022710 | 36.747 | 166 | 93 | 5 | 2 | 164 | 263 | 419 | 4.55e-25 | 103 |
| MS.gene33493.t1 | MTR_2g079580 | 34.940 | 166 | 95 | 5 | 2 | 164 | 260 | 415 | 5.73e-23 | 97.1 |
| MS.gene33493.t1 | MTR_5g069350 | 45.000 | 120 | 36 | 4 | 145 | 254 | 89 | 188 | 6.18e-22 | 90.5 |
| MS.gene33493.t1 | MTR_6g078330 | 48.387 | 93 | 47 | 1 | 1 | 92 | 267 | 359 | 1.14e-21 | 93.2 |
| MS.gene33493.t1 | MTR_4g066630 | 48.387 | 93 | 47 | 1 | 1 | 92 | 269 | 361 | 2.99e-21 | 92.0 |
| MS.gene33493.t1 | MTR_3g026400 | 50.575 | 87 | 42 | 1 | 2 | 87 | 265 | 351 | 1.76e-20 | 89.7 |
| MS.gene33493.t1 | MTR_4g066640 | 54.023 | 87 | 38 | 2 | 2 | 86 | 267 | 353 | 4.03e-20 | 89.0 |
| MS.gene33493.t1 | MTR_2g022710 | 33.333 | 153 | 92 | 4 | 2 | 152 | 263 | 407 | 1.14e-19 | 87.8 |
| MS.gene33493.t1 | MTR_0110s0040 | 45.263 | 95 | 49 | 2 | 2 | 93 | 270 | 364 | 1.99e-16 | 78.6 |
| MS.gene33493.t1 | MTR_4g016920 | 39.024 | 123 | 73 | 2 | 2 | 122 | 162 | 284 | 5.27e-16 | 76.6 |
| MS.gene33493.t1 | MTR_8g038650 | 42.697 | 89 | 50 | 1 | 2 | 89 | 62 | 150 | 2.12e-15 | 72.0 |
| MS.gene33493.t1 | MTR_2g022710 | 35.246 | 122 | 73 | 3 | 2 | 121 | 263 | 380 | 6.26e-15 | 74.3 |
| MS.gene33493.t1 | MTR_4g122980 | 31.658 | 199 | 89 | 7 | 62 | 258 | 384 | 537 | 6.50e-14 | 71.6 |
| MS.gene33493.t1 | MTR_4g061170 | 65.854 | 41 | 12 | 1 | 202 | 240 | 24 | 64 | 7.33e-11 | 57.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33493.t1 | AT2G44450 | 47.490 | 259 | 119 | 6 | 1 | 257 | 110 | 353 | 1.14e-72 | 226 |
| MS.gene33493.t1 | AT5G44640 | 47.308 | 260 | 119 | 6 | 1 | 257 | 261 | 505 | 6.64e-72 | 229 |
| MS.gene33493.t1 | AT2G44450 | 47.490 | 259 | 119 | 6 | 1 | 257 | 261 | 504 | 6.25e-71 | 226 |
| MS.gene33493.t1 | AT3G60130 | 46.875 | 256 | 118 | 5 | 2 | 254 | 209 | 449 | 1.33e-69 | 221 |
| MS.gene33493.t1 | AT3G60130 | 46.875 | 256 | 118 | 5 | 2 | 254 | 261 | 501 | 4.90e-69 | 221 |
| MS.gene33493.t1 | AT5G42260 | 47.619 | 252 | 114 | 6 | 1 | 249 | 261 | 497 | 3.80e-68 | 219 |
| MS.gene33493.t1 | AT5G54570 | 44.574 | 258 | 126 | 5 | 2 | 253 | 162 | 408 | 3.13e-67 | 215 |
| MS.gene33493.t1 | AT5G54570 | 44.574 | 258 | 126 | 5 | 2 | 253 | 259 | 505 | 2.00e-66 | 215 |
| MS.gene33493.t1 | AT2G44480 | 41.634 | 257 | 138 | 3 | 2 | 256 | 59 | 305 | 4.70e-66 | 208 |
| MS.gene33493.t1 | AT3G60130 | 45.490 | 255 | 112 | 5 | 2 | 254 | 209 | 438 | 2.29e-65 | 210 |
| MS.gene33493.t1 | AT2G44480 | 41.634 | 257 | 138 | 3 | 2 | 256 | 163 | 409 | 1.58e-64 | 207 |
| MS.gene33493.t1 | AT2G44480 | 41.634 | 257 | 138 | 3 | 2 | 256 | 265 | 511 | 1.24e-63 | 207 |
| MS.gene33493.t1 | AT5G36890 | 42.412 | 257 | 135 | 4 | 1 | 254 | 234 | 480 | 2.00e-63 | 206 |
| MS.gene33493.t1 | AT2G44480 | 41.634 | 257 | 138 | 3 | 2 | 256 | 296 | 542 | 2.17e-63 | 207 |
| MS.gene33493.t1 | AT5G36890 | 42.412 | 257 | 135 | 4 | 1 | 254 | 234 | 480 | 2.18e-63 | 206 |
| MS.gene33493.t1 | AT1G26560 | 44.922 | 256 | 128 | 6 | 2 | 253 | 260 | 506 | 2.56e-63 | 206 |
| MS.gene33493.t1 | AT2G44490 | 41.221 | 262 | 139 | 6 | 2 | 257 | 244 | 496 | 5.41e-62 | 204 |
| MS.gene33493.t1 | AT3G18070 | 43.295 | 261 | 128 | 7 | 2 | 257 | 66 | 311 | 9.49e-62 | 197 |
| MS.gene33493.t1 | AT5G24540 | 43.629 | 259 | 136 | 5 | 1 | 256 | 261 | 512 | 1.25e-61 | 202 |
| MS.gene33493.t1 | AT5G24550 | 43.511 | 262 | 132 | 5 | 1 | 256 | 261 | 512 | 6.07e-61 | 201 |
| MS.gene33493.t1 | AT3G18070 | 43.295 | 261 | 128 | 7 | 2 | 257 | 178 | 423 | 1.52e-60 | 197 |
| MS.gene33493.t1 | AT3G18070 | 43.295 | 261 | 128 | 7 | 2 | 257 | 249 | 494 | 5.46e-60 | 197 |
| MS.gene33493.t1 | AT3G18070 | 43.295 | 261 | 128 | 7 | 2 | 257 | 255 | 500 | 7.58e-60 | 197 |
| MS.gene33493.t1 | AT2G25630 | 43.922 | 255 | 110 | 6 | 1 | 253 | 260 | 483 | 2.34e-59 | 196 |
| MS.gene33493.t1 | AT3G60120 | 40.602 | 266 | 131 | 8 | 1 | 255 | 242 | 491 | 5.23e-59 | 196 |
| MS.gene33493.t1 | AT3G60140 | 42.857 | 259 | 133 | 6 | 1 | 254 | 255 | 503 | 3.00e-58 | 194 |
| MS.gene33493.t1 | AT3G18080 | 43.462 | 260 | 127 | 7 | 2 | 256 | 266 | 510 | 3.77e-58 | 193 |
| MS.gene33493.t1 | AT2G44460 | 43.023 | 258 | 134 | 5 | 1 | 254 | 111 | 359 | 4.55e-57 | 188 |
| MS.gene33493.t1 | AT1G51470 | 42.913 | 254 | 130 | 6 | 2 | 253 | 269 | 509 | 8.68e-56 | 187 |
| MS.gene33493.t1 | AT2G44460 | 43.023 | 258 | 134 | 5 | 1 | 254 | 257 | 505 | 8.99e-56 | 188 |
| MS.gene33493.t1 | AT1G47600 | 43.307 | 254 | 129 | 7 | 2 | 253 | 269 | 509 | 9.05e-56 | 187 |
| MS.gene33493.t1 | AT3G03640 | 42.802 | 257 | 132 | 6 | 4 | 254 | 266 | 513 | 1.19e-55 | 187 |
| MS.gene33493.t1 | AT1G61820 | 40.310 | 258 | 142 | 6 | 2 | 256 | 120 | 368 | 2.92e-55 | 182 |
| MS.gene33493.t1 | AT1G47600 | 43.307 | 254 | 128 | 8 | 2 | 253 | 269 | 508 | 2.56e-54 | 183 |
| MS.gene33493.t1 | AT4G21760 | 40.000 | 260 | 140 | 6 | 2 | 259 | 282 | 527 | 2.56e-54 | 184 |
| MS.gene33493.t1 | AT1G61820 | 40.310 | 258 | 142 | 6 | 2 | 256 | 259 | 507 | 6.36e-54 | 182 |
| MS.gene33493.t1 | AT1G61810 | 38.760 | 258 | 146 | 5 | 2 | 256 | 162 | 410 | 2.52e-51 | 173 |
| MS.gene33493.t1 | AT4G21760 | 38.996 | 259 | 134 | 6 | 2 | 259 | 282 | 517 | 3.45e-51 | 175 |
| MS.gene33493.t1 | AT1G61810 | 38.760 | 258 | 146 | 5 | 2 | 256 | 262 | 510 | 1.79e-50 | 173 |
| MS.gene33493.t1 | AT1G75940 | 40.310 | 258 | 143 | 6 | 1 | 254 | 268 | 518 | 1.93e-50 | 173 |
| MS.gene33493.t1 | AT5G26000 | 40.392 | 255 | 139 | 5 | 2 | 253 | 267 | 511 | 2.00e-50 | 173 |
| MS.gene33493.t1 | AT2G44470 | 39.147 | 258 | 140 | 6 | 2 | 253 | 259 | 505 | 3.28e-50 | 173 |
| MS.gene33493.t1 | AT2G32860 | 37.165 | 261 | 149 | 6 | 4 | 259 | 327 | 577 | 8.54e-49 | 170 |
| MS.gene33493.t1 | AT1G66270 | 41.825 | 263 | 126 | 8 | 2 | 253 | 262 | 508 | 8.82e-49 | 168 |
| MS.gene33493.t1 | AT1G66270 | 41.825 | 263 | 126 | 8 | 2 | 253 | 264 | 510 | 9.30e-49 | 168 |
| MS.gene33493.t1 | AT3G21370 | 40.541 | 259 | 139 | 8 | 1 | 254 | 264 | 512 | 2.37e-48 | 167 |
| MS.gene33493.t1 | AT5G25980 | 40.467 | 257 | 138 | 9 | 2 | 254 | 278 | 523 | 2.90e-48 | 167 |
| MS.gene33493.t1 | AT2G32860 | 35.849 | 265 | 145 | 8 | 4 | 259 | 328 | 576 | 7.80e-48 | 167 |
| MS.gene33493.t1 | AT1G66280 | 40.467 | 257 | 140 | 6 | 1 | 253 | 263 | 510 | 7.95e-48 | 166 |
| MS.gene33493.t1 | AT5G28510 | 38.760 | 258 | 143 | 6 | 1 | 253 | 272 | 519 | 1.95e-47 | 165 |
| MS.gene33493.t1 | AT1G52400 | 39.608 | 255 | 139 | 8 | 4 | 254 | 273 | 516 | 2.52e-46 | 162 |
| MS.gene33493.t1 | AT1G52400 | 39.608 | 255 | 139 | 8 | 4 | 254 | 273 | 516 | 2.52e-46 | 162 |
| MS.gene33493.t1 | AT3G09260 | 38.610 | 259 | 146 | 5 | 1 | 255 | 263 | 512 | 2.98e-46 | 162 |
| MS.gene33493.t1 | AT1G61810 | 39.149 | 235 | 132 | 4 | 2 | 233 | 262 | 488 | 7.18e-45 | 158 |
| MS.gene33493.t1 | AT4G27830 | 35.827 | 254 | 142 | 6 | 2 | 253 | 162 | 396 | 1.84e-41 | 147 |
| MS.gene33493.t1 | AT4G27820 | 35.433 | 254 | 144 | 6 | 2 | 253 | 162 | 397 | 2.13e-41 | 147 |
| MS.gene33493.t1 | AT4G27820 | 35.433 | 254 | 144 | 6 | 2 | 253 | 162 | 397 | 2.13e-41 | 147 |
| MS.gene33493.t1 | AT5G54570 | 39.216 | 204 | 108 | 4 | 2 | 200 | 259 | 451 | 8.37e-41 | 146 |
| MS.gene33493.t1 | AT4G27820 | 35.433 | 254 | 144 | 6 | 2 | 253 | 247 | 482 | 1.04e-40 | 147 |
| MS.gene33493.t1 | AT4G27830 | 35.827 | 254 | 142 | 6 | 2 | 253 | 250 | 484 | 1.09e-40 | 147 |
| MS.gene33493.t1 | AT1G02850 | 33.594 | 256 | 146 | 5 | 2 | 254 | 275 | 509 | 1.24e-38 | 141 |
| MS.gene33493.t1 | AT1G02850 | 33.594 | 256 | 146 | 5 | 2 | 254 | 252 | 486 | 1.32e-38 | 141 |
| MS.gene33493.t1 | AT3G62750 | 31.890 | 254 | 153 | 5 | 2 | 253 | 153 | 388 | 1.70e-37 | 136 |
| MS.gene33493.t1 | AT3G62750 | 31.890 | 254 | 153 | 5 | 2 | 253 | 153 | 388 | 1.70e-37 | 136 |
| MS.gene33493.t1 | AT4G22100 | 35.798 | 257 | 147 | 7 | 2 | 256 | 245 | 485 | 2.75e-37 | 137 |
| MS.gene33493.t1 | AT3G62750 | 31.890 | 254 | 153 | 5 | 2 | 253 | 238 | 473 | 6.57e-37 | 136 |
| MS.gene33493.t1 | AT1G02850 | 33.463 | 257 | 146 | 6 | 2 | 254 | 275 | 510 | 6.70e-37 | 136 |
| MS.gene33493.t1 | AT3G62750 | 31.496 | 254 | 154 | 5 | 2 | 253 | 264 | 499 | 8.73e-37 | 136 |
| MS.gene33493.t1 | AT1G02850 | 34.914 | 232 | 127 | 5 | 26 | 254 | 249 | 459 | 5.58e-36 | 133 |
| MS.gene33493.t1 | AT5G24540 | 38.308 | 201 | 115 | 4 | 1 | 199 | 261 | 454 | 2.82e-34 | 128 |
| MS.gene33493.t1 | AT3G62740 | 31.518 | 257 | 149 | 7 | 2 | 253 | 244 | 478 | 2.11e-33 | 127 |
| MS.gene33493.t1 | AT1G45191 | 32.549 | 255 | 148 | 5 | 2 | 254 | 252 | 484 | 1.54e-31 | 122 |
| MS.gene33493.t1 | AT5G26000 | 36.500 | 200 | 116 | 3 | 2 | 200 | 267 | 456 | 2.84e-30 | 117 |
| MS.gene33493.t1 | AT1G45191 | 32.157 | 255 | 160 | 5 | 2 | 254 | 252 | 495 | 4.25e-30 | 118 |
| MS.gene33493.t1 | AT1G45191 | 32.157 | 255 | 160 | 5 | 2 | 254 | 264 | 507 | 4.57e-30 | 118 |
| MS.gene33493.t1 | AT1G45191 | 32.157 | 255 | 155 | 6 | 2 | 254 | 252 | 490 | 5.26e-30 | 117 |
| MS.gene33493.t1 | AT1G60090 | 31.765 | 255 | 154 | 6 | 2 | 254 | 247 | 483 | 6.21e-30 | 117 |
| MS.gene33493.t1 | AT5G48375 | 36.818 | 220 | 93 | 7 | 2 | 218 | 235 | 411 | 6.51e-30 | 116 |
| MS.gene33493.t1 | AT5G25980 | 37.313 | 201 | 113 | 7 | 2 | 200 | 278 | 467 | 1.62e-29 | 115 |
| MS.gene33493.t1 | AT5G25980 | 37.313 | 201 | 113 | 7 | 2 | 200 | 278 | 467 | 1.62e-29 | 115 |
| MS.gene33493.t1 | AT3G18070 | 39.412 | 170 | 86 | 5 | 2 | 166 | 66 | 223 | 7.62e-29 | 109 |
| MS.gene33493.t1 | AT3G18070 | 39.412 | 170 | 86 | 5 | 2 | 166 | 178 | 335 | 7.16e-28 | 109 |
| MS.gene33493.t1 | AT1G60090 | 30.651 | 261 | 156 | 7 | 2 | 254 | 247 | 490 | 1.10e-27 | 111 |
| MS.gene33493.t1 | AT2G44470 | 34.975 | 203 | 116 | 5 | 2 | 199 | 259 | 450 | 7.02e-27 | 108 |
| MS.gene33493.t1 | AT3G60140 | 40.000 | 170 | 88 | 6 | 1 | 166 | 255 | 414 | 2.50e-25 | 104 |
| MS.gene33493.t1 | AT5G16580 | 33.491 | 212 | 119 | 8 | 2 | 210 | 107 | 299 | 2.01e-22 | 94.0 |
| MS.gene33493.t1 | AT1G52400 | 35.149 | 202 | 117 | 7 | 1 | 199 | 270 | 460 | 9.50e-22 | 94.0 |
| MS.gene33493.t1 | AT3G62750 | 27.723 | 202 | 127 | 4 | 2 | 202 | 264 | 447 | 2.51e-20 | 90.1 |
| MS.gene33493.t1 | AT1G61810 | 33.133 | 166 | 100 | 4 | 2 | 164 | 262 | 419 | 7.96e-20 | 88.6 |
| MS.gene33493.t1 | AT3G62740 | 30.256 | 195 | 110 | 6 | 2 | 192 | 244 | 416 | 5.07e-19 | 86.3 |
| MS.gene33493.t1 | AT3G06510 | 30.846 | 201 | 112 | 5 | 69 | 258 | 364 | 548 | 2.61e-17 | 81.6 |
| MS.gene33493.t1 | AT3G18070 | 43.820 | 89 | 49 | 1 | 2 | 89 | 255 | 343 | 7.77e-17 | 79.7 |
| MS.gene33493.t1 | AT1G02850 | 30.303 | 165 | 98 | 3 | 2 | 164 | 275 | 424 | 2.82e-15 | 75.5 |
| MS.gene33493.t1 | AT3G06510 | 31.250 | 192 | 89 | 6 | 69 | 258 | 364 | 514 | 5.89e-15 | 74.7 |
| MS.gene33493.t1 | AT2G44470 | 43.333 | 90 | 49 | 2 | 2 | 89 | 259 | 348 | 8.79e-15 | 73.6 |
| MS.gene33493.t1 | AT3G62750 | 35.484 | 93 | 59 | 1 | 2 | 93 | 238 | 330 | 1.69e-12 | 67.0 |
| MS.gene33493.t1 | AT3G62750 | 35.484 | 93 | 59 | 1 | 2 | 93 | 238 | 330 | 1.69e-12 | 67.0 |
| MS.gene33493.t1 | AT3G62750 | 35.484 | 93 | 59 | 1 | 2 | 93 | 264 | 356 | 2.20e-12 | 66.6 |
Find 59 sgRNAs with CRISPR-Local
Find 85 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGAACATAATAGAATTAT+TGG | 0.142938 | 4.2:+85852129 | MS.gene33493:CDS |
| GAGCAATCTAAGAGTCTTAT+TGG | 0.231240 | 4.2:+85851039 | MS.gene33493:CDS |
| ACTGTTAATGTGACTTTAAC+AGG | 0.248704 | 4.2:+85851180 | MS.gene33493:CDS |
| CAGGCTCAAAATGGTATAAT+AGG | 0.277472 | 4.2:+85850750 | None:intergenic |
| ACGATTATCATAACAGAAAA+TGG | 0.280720 | 4.2:+85851506 | MS.gene33493:CDS |
| ATACTTTGCATGGTCCCTTT+TGG | 0.290939 | 4.2:+85851993 | MS.gene33493:CDS |
| TGTTTGTCCAAAGGGGATTC+AGG | 0.305206 | 4.2:+85851445 | MS.gene33493:CDS |
| AGCTCTCTGCCCGGTGGTTT+AGG | 0.309537 | 4.2:+85852100 | MS.gene33493:CDS |
| GACGGATACACTGTGCGTTT+TGG | 0.311280 | 4.2:+85852033 | MS.gene33493:CDS |
| GACGCCCTTGATTTCATGTT+TGG | 0.322541 | 4.2:+85850840 | MS.gene33493:CDS |
| ACCACATATCAGGCTCAAAA+TGG | 0.345183 | 4.2:+85850741 | None:intergenic |
| TCTAATGGGTCAGTTGAGTA+TGG | 0.349718 | 4.2:-85850801 | None:intergenic |
| CATGAAATCAAGGGCGTCTT+CGG | 0.355937 | 4.2:-85850835 | None:intergenic |
| GCAGTGAACGTTGGTAAATC+TGG | 0.366493 | 4.2:-85851015 | None:intergenic |
| GATCCAGACTGTATAGGAAT+TGG | 0.386737 | 4.2:-85851123 | None:intergenic |
| AGGCAAGGTGTGAATGTAAA+AGG | 0.387936 | 4.2:+85851970 | MS.gene33493:intron |
| TCCATTCAAAGTTGTCCAAA+AGG | 0.405927 | 4.2:-85852008 | None:intergenic |
| TGGCTATATGTTTGTCCAAA+GGG | 0.410402 | 4.2:+85851437 | MS.gene33493:CDS |
| TTTATACAGCCGCTAACAAC+AGG | 0.426920 | 4.2:+85850961 | MS.gene33493:CDS |
| ACATAAGACACCAAGCTTGC+TGG | 0.447607 | 4.2:-85850991 | None:intergenic |
| AACCACCGGGCAGAGAGCTT+AGG | 0.450563 | 4.2:-85852096 | None:intergenic |
| ATGACAGATAAGAATAAAGA+TGG | 0.458312 | 4.2:+85851313 | MS.gene33493:intron |
| CCGCCTGATCCAGACTGTAT+AGG | 0.458956 | 4.2:-85851129 | None:intergenic |
| ACCATCCAAACATGAAATCA+AGG | 0.473106 | 4.2:-85850845 | None:intergenic |
| ACCACCGGGCAGAGAGCTTA+GGG | 0.475465 | 4.2:-85852095 | None:intergenic |
| ATCACTCGAAGAGGCGCTCA+TGG | 0.478154 | 4.2:+85851775 | MS.gene33493:CDS |
| AATAAAGATGGGACATACAT+TGG | 0.483048 | 4.2:+85851325 | MS.gene33493:CDS |
| ATTCCTATACAGTCTGGATC+AGG | 0.483543 | 4.2:+85851126 | MS.gene33493:CDS |
| AGTAGGTCCTGAATCCCCTT+TGG | 0.484753 | 4.2:-85851452 | None:intergenic |
| CAAAATGGTATAATAGGCAT+TGG | 0.486147 | 4.2:+85850756 | MS.gene33493:CDS |
| GCATTGGATTAAACTCTCAC+TGG | 0.490284 | 4.2:+85850772 | MS.gene33493:CDS |
| AGCAATCTAAGAGTCTTATT+GGG | 0.490733 | 4.2:+85851040 | MS.gene33493:CDS |
| CCATTCAAAGTTGTCCAAAA+GGG | 0.499789 | 4.2:-85852007 | None:intergenic |
| CCCTTGATTTCATGTTTGGA+TGG | 0.504970 | 4.2:+85850844 | MS.gene33493:CDS |
| TCTGGATCAGGCGGCGCTGA+CGG | 0.508743 | 4.2:+85851138 | MS.gene33493:CDS |
| AGGAATTGGTTTCGTTGCAT+TGG | 0.510612 | 4.2:-85851109 | None:intergenic |
| AAACCAATTCCTATACAGTC+TGG | 0.511299 | 4.2:+85851120 | MS.gene33493:CDS |
| AGGAAAGTATCCAGCAAGCT+TGG | 0.526086 | 4.2:+85850981 | MS.gene33493:CDS |
| GACAACTTTGAATGGAATGA+CGG | 0.527539 | 4.2:+85852015 | MS.gene33493:CDS |
| GGATACTTTCCTGTTGTTAG+CGG | 0.535598 | 4.2:-85850970 | None:intergenic |
| AATATGTGCAGGCTGCAACT+TGG | 0.539391 | 4.2:+85851417 | MS.gene33493:intron |
| CAAGAAACTTCCTAAACCAC+CGG | 0.545200 | 4.2:-85852110 | None:intergenic |
| TTGGCTATATGTTTGTCCAA+AGG | 0.547740 | 4.2:+85851436 | MS.gene33493:CDS |
| TTTCCTTTGTGTACAACAGT+AGG | 0.554600 | 4.2:-85851469 | None:intergenic |
| GACACCCTAAGCTCTCTGCC+CGG | 0.573913 | 4.2:+85852091 | MS.gene33493:CDS |
| TGGGACATACATTGGAGCAT+GGG | 0.581493 | 4.2:+85851333 | MS.gene33493:CDS |
| ATGGGACATACATTGGAGCA+TGG | 0.582897 | 4.2:+85851332 | MS.gene33493:CDS |
| GATTGCTCTGCAGTGAACGT+TGG | 0.602380 | 4.2:-85851024 | None:intergenic |
| GGCTATATGTTTGTCCAAAG+GGG | 0.602874 | 4.2:+85851438 | MS.gene33493:CDS |
| TGACAGATAAGAATAAAGAT+GGG | 0.612129 | 4.2:+85851314 | MS.gene33493:intron |
| ATGTAAAAGGATACTTTGCA+TGG | 0.622027 | 4.2:+85851983 | MS.gene33493:CDS |
| CCATCCAAACATGAAATCAA+GGG | 0.640294 | 4.2:-85850844 | None:intergenic |
| TGCATTGGCAGCATACATGC+TGG | 0.650774 | 4.2:-85851094 | None:intergenic |
| CCTATACAGTCTGGATCAGG+CGG | 0.652705 | 4.2:+85851129 | MS.gene33493:CDS |
| TCCTACACTATCACTCGAAG+AGG | 0.658030 | 4.2:+85851766 | MS.gene33493:CDS |
| GGACCTACTGTTGTACACAA+AGG | 0.659998 | 4.2:+85851466 | MS.gene33493:CDS |
| AAGAAACTTCCTAAACCACC+GGG | 0.661886 | 4.2:-85852109 | None:intergenic |
| ACCCTAAGCTCTCTGCCCGG+TGG | 0.683098 | 4.2:+85852094 | MS.gene33493:CDS |
| GCCTCTTCGAGTGATAGTGT+AGG | 0.709813 | 4.2:-85851767 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAGATTTCAAATTATA+CGG | - | chr4.2:85850928-85850947 | None:intergenic | 10.0% |
| !! | TTCTAATAAATTTAAATCAT+AGG | + | chr4.2:85851725-85851744 | MS.gene33493:intron | 10.0% |
| !! | AAAACAATTTATGTCAAACA+AGG | - | chr4.2:85851281-85851300 | None:intergenic | 20.0% |
| !! | ATTCTGATTTAAGTAAATAG+AGG | - | chr4.2:85851866-85851885 | None:intergenic | 20.0% |
| !! | CTTGAACATAATAGAATTAT+TGG | + | chr4.2:85852129-85852148 | MS.gene33493:CDS | 20.0% |
| !! | TTCTGATTTAAGTAAATAGA+GGG | - | chr4.2:85851865-85851884 | None:intergenic | 20.0% |
| !!! | AATCTTTTTTATCTGTTTAC+AGG | + | chr4.2:85850938-85850957 | MS.gene33493:intron | 20.0% |
| !!! | TTGACTATATTGTTGTTTTT+TGG | + | chr4.2:85851935-85851954 | MS.gene33493:intron | 20.0% |
| ! | ACGATTATCATAACAGAAAA+TGG | + | chr4.2:85851506-85851525 | MS.gene33493:CDS | 25.0% |
| ! | ATGACAGATAAGAATAAAGA+TGG | + | chr4.2:85851313-85851332 | MS.gene33493:intron | 25.0% |
| ! | GTTTATTAGACACTGAAAAA+AGG | - | chr4.2:85851692-85851711 | None:intergenic | 25.0% |
| ! | TGACAGATAAGAATAAAGAT+GGG | + | chr4.2:85851314-85851333 | MS.gene33493:intron | 25.0% |
| !! | ATTATCTTTTATCTGCAATG+AGG | + | chr4.2:85851834-85851853 | MS.gene33493:CDS | 25.0% |
| !! | ATTGGGTCATATGATTTTAT+TGG | + | chr4.2:85851057-85851076 | MS.gene33493:CDS | 25.0% |
| !! | GTTTGACATAAATTGTTTTC+TGG | + | chr4.2:85851282-85851301 | MS.gene33493:intron | 25.0% |
| !! | TTTTCTGTTATGATAATCGT+AGG | - | chr4.2:85851506-85851525 | None:intergenic | 25.0% |
| !!! | TTTTTTGGTTTTTTGTGTGA+AGG | + | chr4.2:85851950-85851969 | MS.gene33493:intron | 25.0% |
| AACAACTAAACAATATGTGC+AGG | + | chr4.2:85851406-85851425 | MS.gene33493:intron | 30.0% | |
| AATAAAGATGGGACATACAT+TGG | + | chr4.2:85851325-85851344 | MS.gene33493:CDS | 30.0% | |
| ACTGTTAATGTGACTTTAAC+AGG | + | chr4.2:85851180-85851199 | MS.gene33493:CDS | 30.0% | |
| ATGTAAAAGGATACTTTGCA+TGG | + | chr4.2:85851983-85852002 | MS.gene33493:CDS | 30.0% | |
| CAAAATGGTATAATAGGCAT+TGG | + | chr4.2:85850756-85850775 | MS.gene33493:CDS | 30.0% | |
| !! | AGCAATCTAAGAGTCTTATT+GGG | + | chr4.2:85851040-85851059 | MS.gene33493:CDS | 30.0% |
| AAACCAATTCCTATACAGTC+TGG | + | chr4.2:85851120-85851139 | MS.gene33493:CDS | 35.0% | |
| ACCATCCAAACATGAAATCA+AGG | - | chr4.2:85850848-85850867 | None:intergenic | 35.0% | |
| ATCCATGGTTGTTGTAGAAA+CGG | - | chr4.2:85850889-85850908 | None:intergenic | 35.0% | |
| CCATCCAAACATGAAATCAA+GGG | - | chr4.2:85850847-85850866 | None:intergenic | 35.0% | |
| CCATTCAAAGTTGTCCAAAA+GGG | - | chr4.2:85852010-85852029 | None:intergenic | 35.0% | |
| GACAACTTTGAATGGAATGA+CGG | + | chr4.2:85852015-85852034 | MS.gene33493:CDS | 35.0% | |
| TCCATTCAAAGTTGTCCAAA+AGG | - | chr4.2:85852011-85852030 | None:intergenic | 35.0% | |
| TGATGTATGCCATCTTCATT+AGG | - | chr4.2:85851228-85851247 | None:intergenic | 35.0% | |
| TGGCTATATGTTTGTCCAAA+GGG | + | chr4.2:85851437-85851456 | MS.gene33493:CDS | 35.0% | |
| TTCATTAGGAGTGGTAAGAA+AGG | - | chr4.2:85851214-85851233 | None:intergenic | 35.0% | |
| TTGGCTATATGTTTGTCCAA+AGG | + | chr4.2:85851436-85851455 | MS.gene33493:CDS | 35.0% | |
| TTTCCTTTGTGTACAACAGT+AGG | - | chr4.2:85851472-85851491 | None:intergenic | 35.0% | |
| ! | GAAACGGTCAAAAAGTATAG+TGG | - | chr4.2:85850873-85850892 | None:intergenic | 35.0% |
| ! | GAGCAATCTAAGAGTCTTAT+TGG | + | chr4.2:85851039-85851058 | MS.gene33493:CDS | 35.0% |
| AAGAAACTTCCTAAACCACC+GGG | - | chr4.2:85852112-85852131 | None:intergenic | 40.0% | |
| ACCATGGATCACGACAAAAT+TGG | + | chr4.2:85850900-85850919 | MS.gene33493:intron | 40.0% | |
| AGGCAAGGTGTGAATGTAAA+AGG | + | chr4.2:85851970-85851989 | MS.gene33493:intron | 40.0% | |
| ATTCCTATACAGTCTGGATC+AGG | + | chr4.2:85851126-85851145 | MS.gene33493:CDS | 40.0% | |
| CAAGAAACTTCCTAAACCAC+CGG | - | chr4.2:85852113-85852132 | None:intergenic | 40.0% | |
| CCATGGATCACGACAAAATT+GGG | + | chr4.2:85850901-85850920 | MS.gene33493:intron | 40.0% | |
| CCCTTGATTTCATGTTTGGA+TGG | + | chr4.2:85850844-85850863 | MS.gene33493:CDS | 40.0% | |
| CTTACCACTCCTAATGAAGA+TGG | + | chr4.2:85851216-85851235 | MS.gene33493:intron | 40.0% | |
| GATCCAGACTGTATAGGAAT+TGG | - | chr4.2:85851126-85851145 | None:intergenic | 40.0% | |
| GCATTGGATTAAACTCTCAC+TGG | + | chr4.2:85850772-85850791 | MS.gene33493:CDS | 40.0% | |
| GGATACTTTCCTGTTGTTAG+CGG | - | chr4.2:85850973-85850992 | None:intergenic | 40.0% | |
| GGCTATATGTTTGTCCAAAG+GGG | + | chr4.2:85851438-85851457 | MS.gene33493:CDS | 40.0% | |
| TATGCCATCTTCATTAGGAG+TGG | - | chr4.2:85851223-85851242 | None:intergenic | 40.0% | |
| TTTATACAGCCGCTAACAAC+AGG | + | chr4.2:85850961-85850980 | MS.gene33493:CDS | 40.0% | |
| ! | AGGAATTGGTTTCGTTGCAT+TGG | - | chr4.2:85851112-85851131 | None:intergenic | 40.0% |
| ! | ATACTTTGCATGGTCCCTTT+TGG | + | chr4.2:85851993-85852012 | MS.gene33493:CDS | 40.0% |
| ! | CCCTTTTGGACAACTTTGAA+TGG | + | chr4.2:85852007-85852026 | MS.gene33493:CDS | 40.0% |
| ! | CGGCAGCTTTTAGATCTAAT+GGG | - | chr4.2:85850818-85850837 | None:intergenic | 40.0% |
| ! | TCGGCAGCTTTTAGATCTAA+TGG | - | chr4.2:85850819-85850838 | None:intergenic | 40.0% |
| ! | TCTAATGGGTCAGTTGAGTA+TGG | - | chr4.2:85850804-85850823 | None:intergenic | 40.0% |
| !!! | TGGTTTTTTGTGTGAAGGCA+AGG | + | chr4.2:85851955-85851974 | MS.gene33493:intron | 40.0% |
| AATATGTGCAGGCTGCAACT+TGG | + | chr4.2:85851417-85851436 | MS.gene33493:intron | 45.0% | |
| ACATAAGACACCAAGCTTGC+TGG | - | chr4.2:85850994-85851013 | None:intergenic | 45.0% | |
| ATGGGACATACATTGGAGCA+TGG | + | chr4.2:85851332-85851351 | MS.gene33493:CDS | 45.0% | |
| GACCGTTTCTACAACAACCA+TGG | + | chr4.2:85850884-85850903 | MS.gene33493:intron | 45.0% | |
| GACGCCCTTGATTTCATGTT+TGG | + | chr4.2:85850840-85850859 | MS.gene33493:CDS | 45.0% | |
| GGACCTACTGTTGTACACAA+AGG | + | chr4.2:85851466-85851485 | MS.gene33493:CDS | 45.0% | |
| TCCTACACTATCACTCGAAG+AGG | + | chr4.2:85851766-85851785 | MS.gene33493:CDS | 45.0% | |
| TGGGACATACATTGGAGCAT+GGG | + | chr4.2:85851333-85851352 | MS.gene33493:CDS | 45.0% | |
| TGTTTGTCCAAAGGGGATTC+AGG | + | chr4.2:85851445-85851464 | MS.gene33493:CDS | 45.0% | |
| ! | CCCAATTTTGTCGTGATCCA+TGG | - | chr4.2:85850904-85850923 | None:intergenic | 45.0% |
| ! | GCAGTGAACGTTGGTAAATC+TGG | - | chr4.2:85851018-85851037 | None:intergenic | 45.0% |
| !! | AGGAAAGTATCCAGCAAGCT+TGG | + | chr4.2:85850981-85851000 | MS.gene33493:CDS | 45.0% |
| !! | CATGAAATCAAGGGCGTCTT+CGG | - | chr4.2:85850838-85850857 | None:intergenic | 45.0% |
| AGTAGGTCCTGAATCCCCTT+TGG | - | chr4.2:85851455-85851474 | None:intergenic | 50.0% | |
| CCTATACAGTCTGGATCAGG+CGG | + | chr4.2:85851129-85851148 | MS.gene33493:CDS | 50.0% | |
| GATTGCTCTGCAGTGAACGT+TGG | - | chr4.2:85851027-85851046 | None:intergenic | 50.0% | |
| ! | GACGGATACACTGTGCGTTT+TGG | + | chr4.2:85852033-85852052 | MS.gene33493:CDS | 50.0% |
| ! | GCCTCTTCGAGTGATAGTGT+AGG | - | chr4.2:85851770-85851789 | None:intergenic | 50.0% |
| ! | TGCATTGGCAGCATACATGC+TGG | - | chr4.2:85851097-85851116 | None:intergenic | 50.0% |
| CCGCCTGATCCAGACTGTAT+AGG | - | chr4.2:85851132-85851151 | None:intergenic | 55.0% | |
| !! | ATCACTCGAAGAGGCGCTCA+TGG | + | chr4.2:85851775-85851794 | MS.gene33493:CDS | 55.0% |
| AACCACCGGGCAGAGAGCTT+AGG | - | chr4.2:85852099-85852118 | None:intergenic | 60.0% | |
| ACCACCGGGCAGAGAGCTTA+GGG | - | chr4.2:85852098-85852117 | None:intergenic | 60.0% | |
| AGCTCTCTGCCCGGTGGTTT+AGG | + | chr4.2:85852100-85852119 | MS.gene33493:CDS | 60.0% | |
| GACACCCTAAGCTCTCTGCC+CGG | + | chr4.2:85852091-85852110 | MS.gene33493:CDS | 60.0% | |
| ACCCTAAGCTCTCTGCCCGG+TGG | + | chr4.2:85852094-85852113 | MS.gene33493:CDS | 65.0% | |
| ! | TCTGGATCAGGCGGCGCTGA+CGG | + | chr4.2:85851138-85851157 | MS.gene33493:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 85850753 | 85852155 | 85850753 | ID=MS.gene33493 |
| chr4.2 | mRNA | 85850753 | 85852155 | 85850753 | ID=MS.gene33493.t1;Parent=MS.gene33493 |
| chr4.2 | exon | 85850753 | 85850865 | 85850753 | ID=MS.gene33493.t1.exon1;Parent=MS.gene33493.t1 |
| chr4.2 | CDS | 85850753 | 85850865 | 85850753 | ID=cds.MS.gene33493.t1;Parent=MS.gene33493.t1 |
| chr4.2 | exon | 85850960 | 85851201 | 85850960 | ID=MS.gene33493.t1.exon2;Parent=MS.gene33493.t1 |
| chr4.2 | CDS | 85850960 | 85851201 | 85850960 | ID=cds.MS.gene33493.t1;Parent=MS.gene33493.t1 |
| chr4.2 | exon | 85851320 | 85851354 | 85851320 | ID=MS.gene33493.t1.exon3;Parent=MS.gene33493.t1 |
| chr4.2 | CDS | 85851320 | 85851354 | 85851320 | ID=cds.MS.gene33493.t1;Parent=MS.gene33493.t1 |
| chr4.2 | exon | 85851428 | 85851527 | 85851428 | ID=MS.gene33493.t1.exon4;Parent=MS.gene33493.t1 |
| chr4.2 | CDS | 85851428 | 85851527 | 85851428 | ID=cds.MS.gene33493.t1;Parent=MS.gene33493.t1 |
| chr4.2 | exon | 85851747 | 85851855 | 85851747 | ID=MS.gene33493.t1.exon5;Parent=MS.gene33493.t1 |
| chr4.2 | CDS | 85851747 | 85851855 | 85851747 | ID=cds.MS.gene33493.t1;Parent=MS.gene33493.t1 |
| chr4.2 | exon | 85851972 | 85852155 | 85851972 | ID=MS.gene33493.t1.exon6;Parent=MS.gene33493.t1 |
| chr4.2 | CDS | 85851972 | 85852155 | 85851972 | ID=cds.MS.gene33493.t1;Parent=MS.gene33493.t1 |
| Gene Sequence |
| Protein sequence |
