Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33649.t1 | XP_013466435.1 | 85.5 | 399 | 57 | 1 | 1 | 399 | 1 | 398 | 1.70E-188 | 668.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33649.t1 | Q8GYX8 | 53.3 | 321 | 144 | 2 | 1 | 316 | 1 | 320 | 6.2e-91 | 335.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33649.t1 | A0A072VFV7 | 85.5 | 399 | 57 | 1 | 1 | 399 | 1 | 398 | 1.2e-188 | 668.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene047628 | MS.gene33649 | PPI |
| MS.gene99200 | MS.gene33649 | PPI |
| MS.gene56778 | MS.gene33649 | PPI |
| MS.gene071680 | MS.gene33649 | PPI |
| MS.gene041083 | MS.gene33649 | PPI |
| MS.gene015154 | MS.gene33649 | PPI |
| MS.gene33649 | MS.gene90510 | PPI |
| MS.gene010354 | MS.gene33649 | PPI |
| MS.gene046974 | MS.gene33649 | PPI |
| MS.gene92388 | MS.gene33649 | PPI |
| MS.gene011817 | MS.gene33649 | PPI |
| MS.gene024992 | MS.gene33649 | PPI |
| MS.gene33649 | MS.gene92387 | PPI |
| MS.gene33649 | MS.gene40413 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33649.t1 | MTR_1g029460 | 89.724 | 399 | 40 | 1 | 1 | 399 | 1 | 398 | 0.0 | 742 |
| MS.gene33649.t1 | MTR_1g029470 | 80.526 | 380 | 70 | 2 | 1 | 377 | 1 | 379 | 0.0 | 575 |
| MS.gene33649.t1 | MTR_8g037810 | 54.286 | 315 | 135 | 3 | 1 | 308 | 1 | 313 | 2.98e-107 | 319 |
| MS.gene33649.t1 | MTR_5g004570 | 57.018 | 228 | 93 | 1 | 1 | 223 | 1 | 228 | 3.46e-91 | 275 |
| MS.gene33649.t1 | MTR_5g004600 | 47.191 | 89 | 45 | 2 | 221 | 308 | 3 | 90 | 4.94e-19 | 84.3 |
| MS.gene33649.t1 | MTR_2g014480 | 45.070 | 71 | 38 | 1 | 6 | 75 | 4 | 74 | 1.48e-14 | 74.7 |
| MS.gene33649.t1 | MTR_3g027580 | 47.297 | 74 | 38 | 1 | 6 | 78 | 89 | 162 | 2.02e-14 | 75.1 |
| MS.gene33649.t1 | MTR_4g023470 | 52.308 | 65 | 31 | 0 | 7 | 71 | 87 | 151 | 5.07e-14 | 73.6 |
| MS.gene33649.t1 | MTR_7g109340 | 38.298 | 94 | 51 | 1 | 7 | 93 | 27 | 120 | 6.52e-14 | 72.8 |
| MS.gene33649.t1 | MTR_8g006430 | 50.704 | 71 | 31 | 2 | 5 | 75 | 13 | 79 | 2.36e-13 | 71.6 |
| MS.gene33649.t1 | MTR_3g108020 | 41.584 | 101 | 47 | 4 | 5 | 93 | 3 | 103 | 2.83e-13 | 70.5 |
| MS.gene33649.t1 | MTR_5g012530 | 50.725 | 69 | 31 | 1 | 6 | 71 | 12 | 80 | 5.78e-13 | 70.9 |
| MS.gene33649.t1 | MTR_4g015840 | 43.662 | 71 | 39 | 1 | 6 | 75 | 4 | 74 | 1.16e-12 | 68.9 |
| MS.gene33649.t1 | MTR_2g104030 | 36.735 | 98 | 54 | 2 | 5 | 95 | 69 | 165 | 2.02e-12 | 68.9 |
| MS.gene33649.t1 | MTR_2g083920 | 40.845 | 71 | 42 | 0 | 6 | 76 | 70 | 140 | 2.94e-12 | 67.0 |
| MS.gene33649.t1 | MTR_4g080350 | 41.333 | 75 | 44 | 0 | 2 | 76 | 68 | 142 | 3.62e-12 | 67.4 |
| MS.gene33649.t1 | MTR_4g078850 | 42.254 | 71 | 40 | 1 | 6 | 75 | 4 | 74 | 5.45e-12 | 67.0 |
| MS.gene33649.t1 | MTR_2g014470 | 38.824 | 85 | 51 | 1 | 6 | 89 | 4 | 88 | 7.33e-12 | 66.6 |
| MS.gene33649.t1 | MTR_2g083920 | 40.845 | 71 | 42 | 0 | 6 | 76 | 70 | 140 | 1.22e-11 | 65.9 |
| MS.gene33649.t1 | MTR_5g065160 | 45.714 | 70 | 38 | 0 | 4 | 73 | 81 | 150 | 1.33e-11 | 66.2 |
| MS.gene33649.t1 | MTR_5g065160 | 45.714 | 70 | 38 | 0 | 4 | 73 | 74 | 143 | 1.44e-11 | 66.2 |
| MS.gene33649.t1 | MTR_5g065160 | 45.714 | 70 | 38 | 0 | 4 | 73 | 80 | 149 | 1.58e-11 | 65.9 |
| MS.gene33649.t1 | MTR_5g065160 | 45.714 | 70 | 38 | 0 | 4 | 73 | 81 | 150 | 1.61e-11 | 65.9 |
| MS.gene33649.t1 | MTR_3g087030 | 40.580 | 69 | 40 | 1 | 4 | 72 | 80 | 147 | 5.22e-11 | 64.3 |
| MS.gene33649.t1 | MTR_4g023490 | 48.485 | 66 | 33 | 1 | 6 | 71 | 16 | 80 | 5.87e-11 | 63.9 |
| MS.gene33649.t1 | MTR_5g065860 | 36.264 | 91 | 58 | 0 | 1 | 91 | 43 | 133 | 8.74e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33649.t1 | AT1G77020 | 62.078 | 385 | 132 | 7 | 1 | 377 | 1 | 379 | 4.32e-157 | 447 |
| MS.gene33649.t1 | AT1G76700 | 49.863 | 365 | 166 | 5 | 1 | 349 | 1 | 364 | 1.51e-117 | 348 |
| MS.gene33649.t1 | AT1G21080 | 48.378 | 370 | 159 | 5 | 1 | 349 | 1 | 359 | 5.45e-115 | 341 |
| MS.gene33649.t1 | AT1G21080 | 51.964 | 331 | 143 | 4 | 1 | 326 | 1 | 320 | 8.04e-115 | 341 |
| MS.gene33649.t1 | AT2G21510 | 49.713 | 348 | 159 | 4 | 1 | 335 | 1 | 345 | 2.25e-105 | 315 |
| MS.gene33649.t1 | AT2G21510 | 49.713 | 348 | 159 | 4 | 1 | 335 | 1 | 345 | 2.25e-105 | 315 |
| MS.gene33649.t1 | AT2G21510 | 52.454 | 326 | 140 | 4 | 1 | 314 | 1 | 323 | 3.02e-105 | 315 |
| MS.gene33649.t1 | AT2G21510 | 52.454 | 326 | 140 | 4 | 1 | 314 | 1 | 323 | 3.02e-105 | 315 |
| MS.gene33649.t1 | AT2G21510 | 52.830 | 318 | 137 | 3 | 1 | 308 | 1 | 315 | 1.68e-104 | 312 |
| MS.gene33649.t1 | AT4G39150 | 52.381 | 315 | 141 | 3 | 1 | 308 | 1 | 313 | 2.98e-102 | 307 |
| MS.gene33649.t1 | AT4G39150 | 52.381 | 315 | 141 | 3 | 1 | 308 | 1 | 313 | 2.98e-102 | 307 |
| MS.gene33649.t1 | AT4G39150 | 52.381 | 315 | 141 | 3 | 1 | 308 | 1 | 313 | 2.98e-102 | 307 |
| MS.gene33649.t1 | AT1G21080 | 44.128 | 281 | 126 | 4 | 90 | 349 | 2 | 272 | 2.19e-70 | 224 |
| MS.gene33649.t1 | AT5G25530 | 39.252 | 107 | 49 | 3 | 6 | 96 | 4 | 110 | 4.01e-15 | 76.3 |
| MS.gene33649.t1 | AT5G48030 | 50.000 | 66 | 33 | 0 | 6 | 71 | 94 | 159 | 4.71e-14 | 73.9 |
| MS.gene33649.t1 | AT1G80030 | 39.175 | 97 | 51 | 2 | 6 | 95 | 75 | 170 | 2.33e-13 | 72.0 |
| MS.gene33649.t1 | AT1G80030 | 39.175 | 97 | 51 | 2 | 6 | 95 | 75 | 170 | 2.33e-13 | 72.0 |
| MS.gene33649.t1 | AT1G80030 | 39.175 | 97 | 51 | 2 | 6 | 95 | 75 | 170 | 2.33e-13 | 72.0 |
| MS.gene33649.t1 | AT1G80030 | 39.175 | 97 | 51 | 2 | 6 | 95 | 75 | 170 | 2.43e-13 | 72.0 |
| MS.gene33649.t1 | AT5G25530 | 37.391 | 115 | 48 | 4 | 6 | 96 | 4 | 118 | 4.98e-13 | 70.1 |
| MS.gene33649.t1 | AT5G01390 | 41.096 | 73 | 42 | 1 | 6 | 77 | 4 | 76 | 5.96e-13 | 68.6 |
| MS.gene33649.t1 | AT4G28480 | 46.479 | 71 | 37 | 1 | 6 | 75 | 4 | 74 | 6.28e-13 | 69.3 |
| MS.gene33649.t1 | AT4G28480 | 46.479 | 71 | 37 | 1 | 6 | 75 | 4 | 74 | 9.09e-13 | 69.3 |
| MS.gene33649.t1 | AT5G01390 | 40.541 | 74 | 43 | 1 | 5 | 77 | 3 | 76 | 9.61e-13 | 67.8 |
| MS.gene33649.t1 | AT5G01390 | 41.096 | 73 | 42 | 1 | 6 | 77 | 4 | 76 | 1.32e-12 | 68.2 |
| MS.gene33649.t1 | AT5G06910 | 32.653 | 147 | 82 | 5 | 4 | 148 | 27 | 158 | 1.84e-12 | 67.8 |
| MS.gene33649.t1 | AT2G20560 | 45.070 | 71 | 38 | 1 | 6 | 75 | 4 | 74 | 2.22e-12 | 68.2 |
| MS.gene33649.t1 | AT5G01390 | 41.096 | 73 | 42 | 1 | 6 | 77 | 4 | 76 | 2.27e-12 | 68.2 |
| MS.gene33649.t1 | AT3G08910 | 43.056 | 72 | 40 | 1 | 6 | 76 | 4 | 75 | 2.51e-12 | 67.8 |
| MS.gene33649.t1 | AT3G62600 | 40.845 | 71 | 42 | 0 | 7 | 77 | 27 | 97 | 3.57e-12 | 67.4 |
| MS.gene33649.t1 | AT1G59725 | 41.096 | 73 | 41 | 1 | 6 | 76 | 4 | 76 | 4.08e-12 | 67.4 |
| MS.gene33649.t1 | AT2G35720 | 41.975 | 81 | 44 | 1 | 6 | 83 | 15 | 95 | 1.05e-11 | 67.0 |
| MS.gene33649.t1 | AT1G10350 | 40.845 | 71 | 41 | 1 | 6 | 75 | 4 | 74 | 1.38e-11 | 65.9 |
| MS.gene33649.t1 | AT1G59980 | 39.437 | 71 | 43 | 0 | 8 | 78 | 25 | 95 | 1.75e-11 | 65.9 |
| MS.gene33649.t1 | AT1G59980 | 39.437 | 71 | 43 | 0 | 8 | 78 | 25 | 95 | 1.92e-11 | 65.5 |
| MS.gene33649.t1 | AT2G42750 | 40.845 | 71 | 42 | 0 | 6 | 76 | 76 | 146 | 2.05e-11 | 65.1 |
| MS.gene33649.t1 | AT1G28210 | 44.444 | 63 | 35 | 0 | 7 | 69 | 49 | 111 | 2.11e-11 | 65.5 |
| MS.gene33649.t1 | AT1G28210 | 44.444 | 63 | 35 | 0 | 7 | 69 | 49 | 111 | 2.13e-11 | 65.5 |
| MS.gene33649.t1 | AT1G28210 | 44.444 | 63 | 35 | 0 | 7 | 69 | 49 | 111 | 2.35e-11 | 65.5 |
| MS.gene33649.t1 | AT4G39960 | 37.234 | 94 | 52 | 2 | 4 | 91 | 83 | 175 | 3.48e-11 | 65.1 |
| MS.gene33649.t1 | AT4G39960 | 37.234 | 94 | 52 | 2 | 4 | 91 | 83 | 175 | 3.48e-11 | 65.1 |
| MS.gene33649.t1 | AT3G12170 | 45.588 | 68 | 37 | 0 | 4 | 71 | 9 | 76 | 3.71e-11 | 63.5 |
| MS.gene33649.t1 | AT3G12170 | 45.588 | 68 | 37 | 0 | 4 | 71 | 45 | 112 | 6.10e-11 | 63.5 |
| MS.gene33649.t1 | AT5G16650 | 37.805 | 82 | 51 | 0 | 6 | 87 | 11 | 92 | 7.70e-11 | 60.1 |
| MS.gene33649.t1 | AT5G16650 | 37.805 | 82 | 51 | 0 | 6 | 87 | 11 | 92 | 8.71e-11 | 60.8 |
Find 75 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATCTGGGAGTGCCATTTC+TGG | 0.146807 | 1.1:+15018093 | MS.gene33649:CDS |
| GTTGCATCATTGGCTTCTTC+TGG | 0.226049 | 1.1:+15017130 | MS.gene33649:CDS |
| AATTCTTGGGAAAATATTTC+AGG | 0.228989 | 1.1:+15018839 | MS.gene33649:CDS |
| TTTGCAGTAACGGACATTAT+TGG | 0.283909 | 1.1:+15018125 | MS.gene33649:CDS |
| GCAGTCTTCGCCCAGCTCTT+TGG | 0.299830 | 1.1:+15017070 | MS.gene33649:CDS |
| TAACGCTGCACACAAATTTC+AGG | 0.307752 | 1.1:+15016025 | MS.gene33649:CDS |
| GCTGCCGCTCTTAAAATTCT+TGG | 0.322500 | 1.1:+15018825 | MS.gene33649:CDS |
| AGAAATGTGTATGATCAGTA+TGG | 0.332172 | 1.1:+15016224 | MS.gene33649:CDS |
| GATCGATTAGTGGTGCTCTA+TGG | 0.334324 | 1.1:-15019194 | None:intergenic |
| CGCGCTGATAGAAACCCTTT+TGG | 0.340584 | 1.1:-15017486 | None:intergenic |
| GAAATGGCACTCCCAGATAA+AGG | 0.344356 | 1.1:-15018090 | None:intergenic |
| TTTGGTCACCACAAACATAT+TGG | 0.347971 | 1.1:-15017468 | None:intergenic |
| GCATCTAGATGTTGCATCAT+TGG | 0.354932 | 1.1:+15017120 | MS.gene33649:CDS |
| GAGTGCCATTTCTGGCTGAA+TGG | 0.390156 | 1.1:+15018101 | MS.gene33649:CDS |
| ACTCAGCAAGCAATCTGAAA+TGG | 0.390884 | 1.1:+15018315 | MS.gene33649:CDS |
| GTGCAGCGTTAGGATCGTTT+TGG | 0.398701 | 1.1:-15016013 | None:intergenic |
| TGAAATTTGTGTGCAGCGTT+AGG | 0.402877 | 1.1:-15016023 | None:intergenic |
| TATGGGTAGGCTCTTCAAAA+AGG | 0.409420 | 1.1:+15019363 | MS.gene33649:CDS |
| AATATAAATGTCTCCTGATC+AGG | 0.411024 | 1.1:-15018376 | None:intergenic |
| CTGCCGCTCTTAAAATTCTT+GGG | 0.413442 | 1.1:+15018826 | MS.gene33649:CDS |
| CTTTGGAAGTGAATTGTTTG+AGG | 0.419359 | 1.1:+15017087 | MS.gene33649:CDS |
| TCTGCTATTGCAGGTGCTAA+AGG | 0.423648 | 1.1:+15018767 | MS.gene33649:intron |
| CATTTATATTGAATTCTTTG+TGG | 0.433120 | 1.1:+15018389 | MS.gene33649:CDS |
| TTTCTCAACCAATATGTTTG+TGG | 0.434290 | 1.1:+15017460 | MS.gene33649:CDS |
| AGCTTTGCGAATTTGATCAT+TGG | 0.435421 | 1.1:-15015849 | None:intergenic |
| ATATGTTTGTGGTGACCAAA+AGG | 0.440721 | 1.1:+15017471 | MS.gene33649:CDS |
| AGTGCCATTTCTGGCTGAAT+GGG | 0.441275 | 1.1:+15018102 | MS.gene33649:CDS |
| ATCGATTAGTGGTGCTCTAT+GGG | 0.452561 | 1.1:-15019193 | None:intergenic |
| ACAATTCACTTCCAAAGAGC+TGG | 0.454176 | 1.1:-15017081 | None:intergenic |
| CTCACATATTCGTCCTGATC+AGG | 0.459025 | 1.1:+15018363 | MS.gene33649:CDS |
| CAAACCCATTCAGCCAGAAA+TGG | 0.461758 | 1.1:-15018106 | None:intergenic |
| AGCTGGGCGAAGACTGCCAT+TGG | 0.462143 | 1.1:-15017064 | None:intergenic |
| CTTCAGGAAAAGAATTCAAA+AGG | 0.463938 | 1.1:+15019096 | MS.gene33649:intron |
| TCAAACTCCCTCTTTCAATC+AGG | 0.468745 | 1.1:+15019215 | MS.gene33649:CDS |
| TCATACACATTTCTCTGTAC+TGG | 0.469083 | 1.1:-15016215 | None:intergenic |
| CTCAGCAAGCAATCTGAAAT+GGG | 0.470144 | 1.1:+15018316 | MS.gene33649:CDS |
| AGACAAGCAGCACAAGAACT+AGG | 0.470629 | 1.1:+15018058 | MS.gene33649:CDS |
| GCAAGACAGCTTTCTCATGC+AGG | 0.472809 | 1.1:+15017520 | MS.gene33649:CDS |
| TGCTTCTGCAGGGTATGGGT+AGG | 0.478733 | 1.1:+15019350 | MS.gene33649:intron |
| TCATCAGCGAGTTTCTTCTT+CGG | 0.481509 | 1.1:-15019126 | None:intergenic |
| GAGGGAGTTTGATCGATTAG+TGG | 0.481751 | 1.1:-15019204 | None:intergenic |
| CAAAGCAAGTTCATCCTGAT+AGG | 0.482643 | 1.1:+15015988 | MS.gene33649:CDS |
| ATGGGAAGCATTCTGTATCT+AGG | 0.484894 | 1.1:+15016243 | MS.gene33649:CDS |
| TATAGGCTGCCAAGAAAGAA+AGG | 0.486517 | 1.1:+15017407 | MS.gene33649:intron |
| AAATGGCACTCCCAGATAAA+GGG | 0.490929 | 1.1:-15018089 | None:intergenic |
| GCTTCTTCTGGACTAGCTGA+TGG | 0.503703 | 1.1:+15017142 | MS.gene33649:CDS |
| GAAAGATGAACTTCAAGGTC+GGG | 0.504278 | 1.1:+15018803 | MS.gene33649:CDS |
| TCTTGAATATATATAGCCTA+TGG | 0.506580 | 1.1:-15018038 | None:intergenic |
| TGCTAAAGGAAAACAACGTT+AGG | 0.507365 | 1.1:+15018781 | MS.gene33649:CDS |
| TATGTTTGTGGTGACCAAAA+GGG | 0.511742 | 1.1:+15017472 | MS.gene33649:CDS |
| GCTGAATGGGTTTGCAGTAA+CGG | 0.513769 | 1.1:+15018115 | MS.gene33649:CDS |
| GTAGTCAAGGTTGCTATGGA+AGG | 0.523234 | 1.1:-15019492 | None:intergenic |
| GTTAGGAAAGATGAACTTCA+AGG | 0.523800 | 1.1:+15018798 | MS.gene33649:CDS |
| CTATCGTACCTGATTGAAAG+AGG | 0.524030 | 1.1:-15019223 | None:intergenic |
| TCACAGTTTACAGCTGCTAA+AGG | 0.530943 | 1.1:+15018151 | MS.gene33649:CDS |
| TTTCTGCTTCTGCAGGGTAT+GGG | 0.531069 | 1.1:+15019346 | MS.gene33649:intron |
| CCATTTGACACACGTGTGCA+AGG | 0.540263 | 1.1:-15018441 | None:intergenic |
| CCTTGCACACGTGTGTCAAA+TGG | 0.542422 | 1.1:+15018441 | MS.gene33649:CDS |
| GCTGGGCGAAGACTGCCATT+GGG | 0.553995 | 1.1:-15017063 | None:intergenic |
| AATTGTTTGAGGACTATGTT+GGG | 0.555228 | 1.1:+15017098 | MS.gene33649:CDS |
| AGAAACTATGCTTGACCCAA+TGG | 0.560508 | 1.1:+15017048 | MS.gene33649:CDS |
| GACAAGCAGCACAAGAACTA+GGG | 0.568521 | 1.1:+15018059 | MS.gene33649:CDS |
| CAATTCACTTCCAAAGAGCT+GGG | 0.577908 | 1.1:-15017080 | None:intergenic |
| GAAATGTGTATGATCAGTAT+GGG | 0.580981 | 1.1:+15016225 | MS.gene33649:CDS |
| GCTGATGATTCTGATGATGA+AGG | 0.587114 | 1.1:+15019141 | MS.gene33649:CDS |
| TCGCAAAGCTTATTATCACA+AGG | 0.590412 | 1.1:+15015862 | MS.gene33649:CDS |
| CATTTGACACACGTGTGCAA+GGG | 0.593903 | 1.1:-15018440 | None:intergenic |
| GAATTGTTTGAGGACTATGT+TGG | 0.594999 | 1.1:+15017097 | MS.gene33649:CDS |
| GGAAAGATGAACTTCAAGGT+CGG | 0.604904 | 1.1:+15018802 | MS.gene33649:CDS |
| TAGTCAAGGTTGCTATGGAA+GGG | 0.605268 | 1.1:-15019491 | None:intergenic |
| GTTGACATGTTACATACCAT+AGG | 0.628688 | 1.1:+15018022 | MS.gene33649:CDS |
| TGGACTAGCTGATGGAAGTG+AGG | 0.629403 | 1.1:+15017150 | MS.gene33649:CDS |
| TATCGTACCTGATTGAAAGA+GGG | 0.633970 | 1.1:-15019222 | None:intergenic |
| AGCAAGCAATCTGAAATGGG+TGG | 0.678875 | 1.1:+15018319 | MS.gene33649:CDS |
| AAGCAGAAGAAGAAACATCG+AGG | 0.749133 | 1.1:-15015826 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAATTTTTTTTACATGAT+TGG | + | chr1.1:15016527-15016546 | MS.gene33649:intron | 10.0% |
| !! | ATAAGCTATTTAATAAATTG+TGG | + | chr1.1:15017894-15017913 | MS.gene33649:intron | 15.0% |
| !! | TAAGCTATTTAATAAATTGT+GGG | + | chr1.1:15017895-15017914 | MS.gene33649:intron | 15.0% |
| !!! | TTATTTTCTCATATTATTAC+TGG | + | chr1.1:15019264-15019283 | MS.gene33649:intron | 15.0% |
| !! | AGAAAAAGAAAATTAGGATT+AGG | + | chr1.1:15016958-15016977 | MS.gene33649:intron | 20.0% |
| !! | AGAACCTTGAAAATATAAAT+AGG | - | chr1.1:15017290-15017309 | None:intergenic | 20.0% |
| !! | ATGAACAGAAAAAGAAAATT+AGG | + | chr1.1:15016952-15016971 | MS.gene33649:intron | 20.0% |
| !! | CATTTATATTGAATTCTTTG+TGG | + | chr1.1:15018389-15018408 | MS.gene33649:CDS | 20.0% |
| !! | GTATCAAATAACAACAAAAA+TGG | - | chr1.1:15016653-15016672 | None:intergenic | 20.0% |
| !! | TTTCGCAAAATGTTAATATA+TGG | + | chr1.1:15017013-15017032 | MS.gene33649:intron | 20.0% |
| !!! | ACGATAGTTTTACATTTAAT+CGG | + | chr1.1:15019239-15019258 | MS.gene33649:intron | 20.0% |
| !!! | TATTTCATGGTTTTAAATTG+TGG | - | chr1.1:15016876-15016895 | None:intergenic | 20.0% |
| ! | AATTCTTGGGAAAATATTTC+AGG | + | chr1.1:15018839-15018858 | MS.gene33649:CDS | 25.0% |
| ! | AGTAATATCTGGTGAAATAA+CGG | - | chr1.1:15017966-15017985 | None:intergenic | 25.0% |
| ! | ATAAGAAGAAACTGACATTA+AGG | - | chr1.1:15018210-15018229 | None:intergenic | 25.0% |
| ! | ATACACTTTCTTATTGTTAC+AGG | + | chr1.1:15015965-15015984 | MS.gene33649:intron | 25.0% |
| ! | ATATTGTGCACATATGATTT+AGG | + | chr1.1:15018262-15018281 | MS.gene33649:intron | 25.0% |
| ! | ATTATGTTGTGCTTCAATAT+AGG | + | chr1.1:15017390-15017409 | MS.gene33649:intron | 25.0% |
| ! | GATAACTAGTTAGTAATATC+TGG | - | chr1.1:15017977-15017996 | None:intergenic | 25.0% |
| ! | GCATAATATAGGAAATGAAA+AGG | + | chr1.1:15018722-15018741 | MS.gene33649:intron | 25.0% |
| ! | GCTATTGGTATGAAAATAAA+AGG | + | chr1.1:15018570-15018589 | MS.gene33649:intron | 25.0% |
| ! | GGATATTACAATGTCAAAAT+TGG | + | chr1.1:15017823-15017842 | MS.gene33649:intron | 25.0% |
| ! | GTATTCTCTGATTTCATATA+CGG | + | chr1.1:15016581-15016600 | MS.gene33649:intron | 25.0% |
| ! | TAAGAAGAAACTGACATTAA+GGG | - | chr1.1:15018209-15018228 | None:intergenic | 25.0% |
| ! | TAATGTCAGTTTCTTCTTAT+TGG | + | chr1.1:15018210-15018229 | MS.gene33649:intron | 25.0% |
| ! | TATAGCATGTTATTGTATCA+AGG | + | chr1.1:15017802-15017821 | MS.gene33649:intron | 25.0% |
| ! | TATTACTGGTATCTATATGT+TGG | + | chr1.1:15019278-15019297 | MS.gene33649:intron | 25.0% |
| ! | TCTTGAATATATATAGCCTA+TGG | - | chr1.1:15018041-15018060 | None:intergenic | 25.0% |
| ! | TGTTTCAGATACATTACTTT+AGG | - | chr1.1:15018644-15018663 | None:intergenic | 25.0% |
| ! | TTTCATTTCCTATATTATGC+TGG | - | chr1.1:15018722-15018741 | None:intergenic | 25.0% |
| !! | AATATGTGAGTCAACATTTT+CGG | - | chr1.1:15018353-15018372 | None:intergenic | 25.0% |
| !! | AGTAGTTTTCTTCAAATTTC+TGG | - | chr1.1:15018925-15018944 | None:intergenic | 25.0% |
| !! | GAAAAAACAGTTTTCACAAA+AGG | - | chr1.1:15018691-15018710 | None:intergenic | 25.0% |
| !! | GAGACCTATTTATATTTTCA+AGG | + | chr1.1:15017283-15017302 | MS.gene33649:intron | 25.0% |
| !! | TGTTTTTCGCATTGTAATTT+TGG | + | chr1.1:15017230-15017249 | MS.gene33649:intron | 25.0% |
| !!! | AAACAAGTGATAGTGAATTT+TGG | + | chr1.1:15018659-15018678 | MS.gene33649:intron | 25.0% |
| !!! | AATACAGAGGTATTATAGAT+TGG | + | chr1.1:15016710-15016729 | MS.gene33649:intron | 25.0% |
| !!! | TTAAGAAGTATTGCGTTTAT+GGG | - | chr1.1:15018980-15018999 | None:intergenic | 25.0% |
| !!! | TTTAAGAAGTATTGCGTTTA+TGG | - | chr1.1:15018981-15019000 | None:intergenic | 25.0% |
| AACAATTCTTTGTGCACATA+TGG | + | chr1.1:15018488-15018507 | MS.gene33649:intron | 30.0% | |
| AAGCTTAGAAGTTAAATGTG+GGG | - | chr1.1:15017626-15017645 | None:intergenic | 30.0% | |
| AATATAAATGTCTCCTGATC+AGG | - | chr1.1:15018379-15018398 | None:intergenic | 30.0% | |
| AATTGTTTGAGGACTATGTT+GGG | + | chr1.1:15017098-15017117 | MS.gene33649:CDS | 30.0% | |
| AGAAATGTGTATGATCAGTA+TGG | + | chr1.1:15016224-15016243 | MS.gene33649:CDS | 30.0% | |
| ATTATGTAGCAATGATGGTT+TGG | + | chr1.1:15016374-15016393 | MS.gene33649:intron | 30.0% | |
| ATTTCCTATATTATGCTGGT+TGG | - | chr1.1:15018718-15018737 | None:intergenic | 30.0% | |
| CAAGCTTAGAAGTTAAATGT+GGG | - | chr1.1:15017627-15017646 | None:intergenic | 30.0% | |
| CAATTCCACATTTCATCATA+TGG | - | chr1.1:15018602-15018621 | None:intergenic | 30.0% | |
| CATATGGTAAAGTTGTTGAT+CGG | + | chr1.1:15018504-15018523 | MS.gene33649:intron | 30.0% | |
| CATGTATGATGTCTATTTCA+TGG | - | chr1.1:15016889-15016908 | None:intergenic | 30.0% | |
| CTTACATTTCTCATCAAAAC+TGG | + | chr1.1:15017687-15017706 | MS.gene33649:intron | 30.0% | |
| CTTCAGGAAAAGAATTCAAA+AGG | + | chr1.1:15019096-15019115 | MS.gene33649:intron | 30.0% | |
| GAAATGTGTATGATCAGTAT+GGG | + | chr1.1:15016225-15016244 | MS.gene33649:CDS | 30.0% | |
| TCAAGCTTAGAAGTTAAATG+TGG | - | chr1.1:15017628-15017647 | None:intergenic | 30.0% | |
| TGGATAACACTATAATGTAG+TGG | + | chr1.1:15017843-15017862 | MS.gene33649:intron | 30.0% | |
| TTTCTAACTTTCAGCTTTCT+AGG | + | chr1.1:15018891-15018910 | MS.gene33649:intron | 30.0% | |
| TTTCTCAACCAATATGTTTG+TGG | + | chr1.1:15017460-15017479 | MS.gene33649:CDS | 30.0% | |
| ! | ATATGTGAGTCAACATTTTC+GGG | - | chr1.1:15018352-15018371 | None:intergenic | 30.0% |
| ! | CTTTTCTTTCCTTTCTTTCT+TGG | - | chr1.1:15017419-15017438 | None:intergenic | 30.0% |
| ! | TAAATATTTCTGCTTCTGCA+GGG | + | chr1.1:15019340-15019359 | MS.gene33649:intron | 30.0% |
| ! | TTTCAGGTATAGAAGTTTCT+CGG | + | chr1.1:15016041-15016060 | MS.gene33649:intron | 30.0% |
| ! | TTTTCATACCAATAGCTTCA+TGG | - | chr1.1:15018566-15018585 | None:intergenic | 30.0% |
| !! | CTATATGTTGGTGTTTTCAT+AGG | + | chr1.1:15019290-15019309 | MS.gene33649:intron | 30.0% |
| !! | GCTATTTTCATTGCTATTGT+GGG | + | chr1.1:15019454-15019473 | MS.gene33649:CDS | 30.0% |
| !! | TTTCCCAAGAATTTTAAGAG+CGG | - | chr1.1:15018832-15018851 | None:intergenic | 30.0% |
| !! | TTTGGTGTTAGTATCTTTGT+CGG | + | chr1.1:15016472-15016491 | MS.gene33649:intron | 30.0% |
| !!! | TGCTATTTTCATTGCTATTG+TGG | + | chr1.1:15019453-15019472 | MS.gene33649:CDS | 30.0% |
| AAGAAACTGACATTAAGGGA+AGG | - | chr1.1:15018205-15018224 | None:intergenic | 35.0% | |
| AAGTCACAATTCTTCTTCTC+TGG | + | chr1.1:15016743-15016762 | MS.gene33649:intron | 35.0% | |
| ACTGATAAATCTGCTATTGC+AGG | + | chr1.1:15018758-15018777 | MS.gene33649:intron | 35.0% | |
| AGAAACTGACATTAAGGGAA+GGG | - | chr1.1:15018204-15018223 | None:intergenic | 35.0% | |
| AGCTTCATGGTCTAAACAAA+AGG | - | chr1.1:15018553-15018572 | None:intergenic | 35.0% | |
| AGCTTTGCGAATTTGATCAT+TGG | - | chr1.1:15015852-15015871 | None:intergenic | 35.0% | |
| ATATGTTTGTGGTGACCAAA+AGG | + | chr1.1:15017471-15017490 | MS.gene33649:CDS | 35.0% | |
| ATCAAGAACCACAACAACAA+AGG | - | chr1.1:15016800-15016819 | None:intergenic | 35.0% | |
| ATGACCAACCAGCATAATAT+AGG | + | chr1.1:15018711-15018730 | MS.gene33649:intron | 35.0% | |
| CAAAAAGGAGAAAGTTATCG+TGG | + | chr1.1:15019378-15019397 | MS.gene33649:CDS | 35.0% | |
| CACGTCATTGTGACTATATT+AGG | - | chr1.1:15019031-15019050 | None:intergenic | 35.0% | |
| GAATTCTACCTGCATTTCTT+TGG | + | chr1.1:15017548-15017567 | MS.gene33649:intron | 35.0% | |
| GAATTGTTTGAGGACTATGT+TGG | + | chr1.1:15017097-15017116 | MS.gene33649:CDS | 35.0% | |
| GCAATATCAATGTAGCATAG+TGG | + | chr1.1:15017928-15017947 | MS.gene33649:intron | 35.0% | |
| GCATAAATCAGCATAGTTCA+TGG | - | chr1.1:15017744-15017763 | None:intergenic | 35.0% | |
| GCGATATTATGTAGCAATGA+TGG | + | chr1.1:15016369-15016388 | MS.gene33649:intron | 35.0% | |
| GGAAACTCTAACGTTTATTC+AGG | - | chr1.1:15016632-15016651 | None:intergenic | 35.0% | |
| GTTAGGAAAGATGAACTTCA+AGG | + | chr1.1:15018798-15018817 | MS.gene33649:CDS | 35.0% | |
| GTTGACATGTTACATACCAT+AGG | + | chr1.1:15018022-15018041 | MS.gene33649:CDS | 35.0% | |
| TATCGTACCTGATTGAAAGA+GGG | - | chr1.1:15019225-15019244 | None:intergenic | 35.0% | |
| TATGTTTGTGGTGACCAAAA+GGG | + | chr1.1:15017472-15017491 | MS.gene33649:CDS | 35.0% | |
| TCATACACATTTCTCTGTAC+TGG | - | chr1.1:15016218-15016237 | None:intergenic | 35.0% | |
| TCGCAAAGCTTATTATCACA+AGG | + | chr1.1:15015862-15015881 | MS.gene33649:CDS | 35.0% | |
| TCTCACCATATGATGAAATG+TGG | + | chr1.1:15018594-15018613 | MS.gene33649:intron | 35.0% | |
| TGCTAAAGGAAAACAACGTT+AGG | + | chr1.1:15018781-15018800 | MS.gene33649:CDS | 35.0% | |
| TGTTTAGACCATGAAGCTAT+TGG | + | chr1.1:15018555-15018574 | MS.gene33649:intron | 35.0% | |
| TTTGGTCACCACAAACATAT+TGG | - | chr1.1:15017471-15017490 | None:intergenic | 35.0% | |
| ! | AGGTATTATAGATTGGTGTC+TGG | + | chr1.1:15016717-15016736 | MS.gene33649:intron | 35.0% |
| ! | CTTTGGAAGTGAATTGTTTG+AGG | + | chr1.1:15017087-15017106 | MS.gene33649:CDS | 35.0% |
| ! | GTAAATATTTCTGCTTCTGC+AGG | + | chr1.1:15019339-15019358 | MS.gene33649:intron | 35.0% |
| ! | TATGTGAGTCAACATTTTCG+GGG | - | chr1.1:15018351-15018370 | None:intergenic | 35.0% |
| !! | GGATTTTCAGGAAAAGCTAA+AGG | + | chr1.1:15017171-15017190 | MS.gene33649:CDS | 35.0% |
| !! | TTTGCAGTAACGGACATTAT+TGG | + | chr1.1:15018125-15018144 | MS.gene33649:CDS | 35.0% |
| !!! | ATTTTCAAAAGAGCGTTTGC+TGG | + | chr1.1:15016685-15016704 | MS.gene33649:intron | 35.0% |
| !!! | TGCTGAGTTCTTTTTGAAGT+TGG | - | chr1.1:15018303-15018322 | None:intergenic | 35.0% |
| AAATGGCACTCCCAGATAAA+GGG | - | chr1.1:15018092-15018111 | None:intergenic | 40.0% | |
| AAGCAGAAGAAGAAACATCG+AGG | - | chr1.1:15015829-15015848 | None:intergenic | 40.0% | |
| ACAATTCACTTCCAAAGAGC+TGG | - | chr1.1:15017084-15017103 | None:intergenic | 40.0% | |
| ACTCAGCAAGCAATCTGAAA+TGG | + | chr1.1:15018315-15018334 | MS.gene33649:CDS | 40.0% | |
| AGAAACTATGCTTGACCCAA+TGG | + | chr1.1:15017048-15017067 | MS.gene33649:CDS | 40.0% | |
| AGGGAAAAATGCCCTTTATC+TGG | + | chr1.1:15018078-15018097 | MS.gene33649:CDS | 40.0% | |
| ATCGATTAGTGGTGCTCTAT+GGG | - | chr1.1:15019196-15019215 | None:intergenic | 40.0% | |
| ATTAAGGGAAGGGTTGCTAA+TGG | - | chr1.1:15018194-15018213 | None:intergenic | 40.0% | |
| CAAAGCAAGTTCATCCTGAT+AGG | + | chr1.1:15015988-15016007 | MS.gene33649:CDS | 40.0% | |
| CAAGCATAGTTTCTCTGTCA+AGG | - | chr1.1:15017042-15017061 | None:intergenic | 40.0% | |
| CAATTCACTTCCAAAGAGCT+GGG | - | chr1.1:15017083-15017102 | None:intergenic | 40.0% | |
| CTATCGTACCTGATTGAAAG+AGG | - | chr1.1:15019226-15019245 | None:intergenic | 40.0% | |
| CTGCCGCTCTTAAAATTCTT+GGG | + | chr1.1:15018826-15018845 | MS.gene33649:CDS | 40.0% | |
| GAAAGATGAACTTCAAGGTC+GGG | + | chr1.1:15018803-15018822 | MS.gene33649:CDS | 40.0% | |
| GCATCTAGATGTTGCATCAT+TGG | + | chr1.1:15017120-15017139 | MS.gene33649:CDS | 40.0% | |
| GCGTTTATGGGATAGCAATT+TGG | - | chr1.1:15018968-15018987 | None:intergenic | 40.0% | |
| GGAAAGATGAACTTCAAGGT+CGG | + | chr1.1:15018802-15018821 | MS.gene33649:CDS | 40.0% | |
| GGGAAAAATGCCCTTTATCT+GGG | + | chr1.1:15018079-15018098 | MS.gene33649:CDS | 40.0% | |
| GTATCATGTAGCGTCATGTT+TGG | + | chr1.1:15016454-15016473 | MS.gene33649:intron | 40.0% | |
| TAAAGTGACGTGCTTACTTC+AGG | + | chr1.1:15019080-15019099 | MS.gene33649:intron | 40.0% | |
| TAACGCTGCACACAAATTTC+AGG | + | chr1.1:15016025-15016044 | MS.gene33649:CDS | 40.0% | |
| TATAGGCTGCCAAGAAAGAA+AGG | + | chr1.1:15017407-15017426 | MS.gene33649:intron | 40.0% | |
| TATGGGTAGGCTCTTCAAAA+AGG | + | chr1.1:15019363-15019382 | MS.gene33649:CDS | 40.0% | |
| TCAAACTCCCTCTTTCAATC+AGG | + | chr1.1:15019215-15019234 | MS.gene33649:CDS | 40.0% | |
| TCACAGTTTACAGCTGCTAA+AGG | + | chr1.1:15018151-15018170 | MS.gene33649:CDS | 40.0% | |
| TCATCAGCGAGTTTCTTCTT+CGG | - | chr1.1:15019129-15019148 | None:intergenic | 40.0% | |
| TGAAATTTGTGTGCAGCGTT+AGG | - | chr1.1:15016026-15016045 | None:intergenic | 40.0% | |
| ! | AGAGAGCTCAGGTTATGTTT+TGG | + | chr1.1:15017261-15017280 | MS.gene33649:intron | 40.0% |
| ! | CTCAGCAAGCAATCTGAAAT+GGG | + | chr1.1:15018316-15018335 | MS.gene33649:CDS | 40.0% |
| ! | GCCAAAACTACGAGTTTTTG+GGG | - | chr1.1:15016854-15016873 | None:intergenic | 40.0% |
| ! | GCTGATGATTCTGATGATGA+AGG | + | chr1.1:15019141-15019160 | MS.gene33649:CDS | 40.0% |
| ! | GGCCAAAACTACGAGTTTTT+GGG | - | chr1.1:15016855-15016874 | None:intergenic | 40.0% |
| ! | TCCCCAAAAACTCGTAGTTT+TGG | + | chr1.1:15016850-15016869 | MS.gene33649:intron | 40.0% |
| ! | TGATGGAAGTGAGGATTTTC+AGG | + | chr1.1:15017159-15017178 | MS.gene33649:CDS | 40.0% |
| ! | TGGCCAAAACTACGAGTTTT+TGG | - | chr1.1:15016856-15016875 | None:intergenic | 40.0% |
| !! | ATGGGAAGCATTCTGTATCT+AGG | + | chr1.1:15016243-15016262 | MS.gene33649:CDS | 40.0% |
| !! | TGCATTAGCCTTTGTTGTTG+TGG | + | chr1.1:15016789-15016808 | MS.gene33649:intron | 40.0% |
| !! | TTTGGTGCTGTCATCAATCA+CGG | - | chr1.1:15018950-15018969 | None:intergenic | 40.0% |
| AAGCAATTGCACGATGCGTT+TGG | - | chr1.1:15017576-15017595 | None:intergenic | 45.0% | |
| AGACAAGCAGCACAAGAACT+AGG | + | chr1.1:15018058-15018077 | MS.gene33649:CDS | 45.0% | |
| ATTTCTGCTTCTGCAGGGTA+TGG | + | chr1.1:15019345-15019364 | MS.gene33649:intron | 45.0% | |
| CAAACCCATTCAGCCAGAAA+TGG | - | chr1.1:15018109-15018128 | None:intergenic | 45.0% | |
| CATTTGACACACGTGTGCAA+GGG | - | chr1.1:15018443-15018462 | None:intergenic | 45.0% | |
| CTCACATATTCGTCCTGATC+AGG | + | chr1.1:15018363-15018382 | MS.gene33649:CDS | 45.0% | |
| GAAATGGCACTCCCAGATAA+AGG | - | chr1.1:15018093-15018112 | None:intergenic | 45.0% | |
| GACAAGCAGCACAAGAACTA+GGG | + | chr1.1:15018059-15018078 | MS.gene33649:CDS | 45.0% | |
| GAGGGAGTTTGATCGATTAG+TGG | - | chr1.1:15019207-15019226 | None:intergenic | 45.0% | |
| GATCGATTAGTGGTGCTCTA+TGG | - | chr1.1:15019197-15019216 | None:intergenic | 45.0% | |
| GCTGCCGCTCTTAAAATTCT+TGG | + | chr1.1:15018825-15018844 | MS.gene33649:CDS | 45.0% | |
| GTGTCTCTGTTTGCAGAGTT+TGG | + | chr1.1:15017998-15018017 | MS.gene33649:intron | 45.0% | |
| GTTTGGCACCAAAGAAATGC+AGG | - | chr1.1:15017559-15017578 | None:intergenic | 45.0% | |
| TCTGCTATTGCAGGTGCTAA+AGG | + | chr1.1:15018767-15018786 | MS.gene33649:intron | 45.0% | |
| TGATCGTGAGTCCTGATTGA+TGG | + | chr1.1:15016825-15016844 | MS.gene33649:intron | 45.0% | |
| TGGTTAGACAAAGAGAGCTC+AGG | + | chr1.1:15017250-15017269 | MS.gene33649:intron | 45.0% | |
| TTTCTGCTTCTGCAGGGTAT+GGG | + | chr1.1:15019346-15019365 | MS.gene33649:intron | 45.0% | |
| ! | AGCAAGCAATCTGAAATGGG+TGG | + | chr1.1:15018319-15018338 | MS.gene33649:CDS | 45.0% |
| ! | AGCATAGTTCATGGCTTGCA+AGG | - | chr1.1:15017735-15017754 | None:intergenic | 45.0% |
| ! | GCTGAATGGGTTTGCAGTAA+CGG | + | chr1.1:15018115-15018134 | MS.gene33649:CDS | 45.0% |
| !! | AGTGCCATTTCTGGCTGAAT+GGG | + | chr1.1:15018102-15018121 | MS.gene33649:CDS | 45.0% |
| !! | GTTGCATCATTGGCTTCTTC+TGG | + | chr1.1:15017130-15017149 | MS.gene33649:CDS | 45.0% |
| !! | TTATCTGGGAGTGCCATTTC+TGG | + | chr1.1:15018093-15018112 | MS.gene33649:CDS | 45.0% |
| !! | TTTTGGGGACTCCATCAATC+AGG | - | chr1.1:15016839-15016858 | None:intergenic | 45.0% |
| !!! | GGATCGTTTTGGTTCCTATC+AGG | - | chr1.1:15016005-15016024 | None:intergenic | 45.0% |
| CCATTTGACACACGTGTGCA+AGG | - | chr1.1:15018444-15018463 | None:intergenic | 50.0% | |
| CCTTGCACACGTGTGTCAAA+TGG | + | chr1.1:15018441-15018460 | MS.gene33649:CDS | 50.0% | |
| GCAAGACAGCTTTCTCATGC+AGG | + | chr1.1:15017520-15017539 | MS.gene33649:CDS | 50.0% | |
| ! | GCGTTTGCTGGCTAATACAG+AGG | + | chr1.1:15016697-15016716 | MS.gene33649:intron | 50.0% |
| ! | GTGCAGCGTTAGGATCGTTT+TGG | - | chr1.1:15016016-15016035 | None:intergenic | 50.0% |
| ! | TAGTTCATGGCTTGCAAGGC+AGG | - | chr1.1:15017731-15017750 | None:intergenic | 50.0% |
| !! | CGCGCTGATAGAAACCCTTT+TGG | - | chr1.1:15017489-15017508 | None:intergenic | 50.0% |
| !! | GAGTGCCATTTCTGGCTGAA+TGG | + | chr1.1:15018101-15018120 | MS.gene33649:CDS | 50.0% |
| !! | GCTTCTTCTGGACTAGCTGA+TGG | + | chr1.1:15017142-15017161 | MS.gene33649:CDS | 50.0% |
| !! | TGGACTAGCTGATGGAAGTG+AGG | + | chr1.1:15017150-15017169 | MS.gene33649:CDS | 50.0% |
| TGCTTCTGCAGGGTATGGGT+AGG | + | chr1.1:15019350-15019369 | MS.gene33649:intron | 55.0% | |
| AGCTGGGCGAAGACTGCCAT+TGG | - | chr1.1:15017067-15017086 | None:intergenic | 60.0% | |
| GCAGTCTTCGCCCAGCTCTT+TGG | + | chr1.1:15017070-15017089 | MS.gene33649:CDS | 60.0% | |
| GCTGGGCGAAGACTGCCATT+GGG | - | chr1.1:15017066-15017085 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 15015797 | 15019501 | 15015797 | ID=MS.gene33649 |
| chr1.1 | mRNA | 15015797 | 15019501 | 15015797 | ID=MS.gene33649.t1;Parent=MS.gene33649 |
| chr1.1 | exon | 15015797 | 15015883 | 15015797 | ID=MS.gene33649.t1.exon1;Parent=MS.gene33649.t1 |
| chr1.1 | CDS | 15015797 | 15015883 | 15015797 | ID=cds.MS.gene33649.t1;Parent=MS.gene33649.t1 |
| chr1.1 | exon | 15015987 | 15016046 | 15015987 | ID=MS.gene33649.t1.exon2;Parent=MS.gene33649.t1 |
| chr1.1 | CDS | 15015987 | 15016046 | 15015987 | ID=cds.MS.gene33649.t1;Parent=MS.gene33649.t1 |
| chr1.1 | exon | 15016182 | 15016264 | 15016182 | ID=MS.gene33649.t1.exon3;Parent=MS.gene33649.t1 |
| chr1.1 | CDS | 15016182 | 15016264 | 15016182 | ID=cds.MS.gene33649.t1;Parent=MS.gene33649.t1 |
| chr1.1 | exon | 15017048 | 15017192 | 15017048 | ID=MS.gene33649.t1.exon4;Parent=MS.gene33649.t1 |
| chr1.1 | CDS | 15017048 | 15017192 | 15017048 | ID=cds.MS.gene33649.t1;Parent=MS.gene33649.t1 |
| chr1.1 | exon | 15017412 | 15017541 | 15017412 | ID=MS.gene33649.t1.exon5;Parent=MS.gene33649.t1 |
| chr1.1 | CDS | 15017412 | 15017541 | 15017412 | ID=cds.MS.gene33649.t1;Parent=MS.gene33649.t1 |
| chr1.1 | exon | 15018014 | 15018172 | 15018014 | ID=MS.gene33649.t1.exon6;Parent=MS.gene33649.t1 |
| chr1.1 | CDS | 15018014 | 15018172 | 15018014 | ID=cds.MS.gene33649.t1;Parent=MS.gene33649.t1 |
| chr1.1 | exon | 15018284 | 15018462 | 15018284 | ID=MS.gene33649.t1.exon7;Parent=MS.gene33649.t1 |
| chr1.1 | CDS | 15018284 | 15018462 | 15018284 | ID=cds.MS.gene33649.t1;Parent=MS.gene33649.t1 |
| chr1.1 | exon | 15018780 | 15018860 | 15018780 | ID=MS.gene33649.t1.exon8;Parent=MS.gene33649.t1 |
| chr1.1 | CDS | 15018780 | 15018860 | 15018780 | ID=cds.MS.gene33649.t1;Parent=MS.gene33649.t1 |
| chr1.1 | exon | 15019102 | 15019236 | 15019102 | ID=MS.gene33649.t1.exon9;Parent=MS.gene33649.t1 |
| chr1.1 | CDS | 15019102 | 15019236 | 15019102 | ID=cds.MS.gene33649.t1;Parent=MS.gene33649.t1 |
| chr1.1 | exon | 15019361 | 15019501 | 15019361 | ID=MS.gene33649.t1.exon10;Parent=MS.gene33649.t1 |
| chr1.1 | CDS | 15019361 | 15019501 | 15019361 | ID=cds.MS.gene33649.t1;Parent=MS.gene33649.t1 |
| Gene Sequence |
| Protein sequence |
