Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33836.t1 | XP_024638340.1 | 89.7 | 658 | 46 | 4 | 1 | 637 | 80 | 736 | 0.00E+00 | 1142.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33836.t1 | O81906 | 53.7 | 656 | 275 | 11 | 2 | 633 | 79 | 729 | 5.5e-190 | 665.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33836.t1 | Q2HTU4 | 89.7 | 658 | 46 | 4 | 1 | 637 | 80 | 736 | 0.0e+00 | 1142.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049499 | MS.gene33836 | 0.82507 | 5.73E-54 | -1.69E-46 |
| MS.gene051699 | MS.gene33836 | 0.808308 | 3.30E-50 | -1.69E-46 |
| MS.gene052579 | MS.gene33836 | 0.869818 | 2.33E-66 | -1.69E-46 |
| MS.gene053272 | MS.gene33836 | -0.819121 | 1.37E-52 | -1.69E-46 |
| MS.gene055150 | MS.gene33836 | 0.817946 | 2.53E-52 | -1.69E-46 |
| MS.gene05952 | MS.gene33836 | 0.839305 | 1.72E-57 | -1.69E-46 |
| MS.gene05985 | MS.gene33836 | -0.830102 | 3.55E-55 | -1.69E-46 |
| MS.gene060906 | MS.gene33836 | 0.804 | 2.66E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene33836 | 0.801298 | 9.62E-49 | -1.69E-46 |
| MS.gene060937 | MS.gene33836 | 0.82062 | 6.23E-53 | -1.69E-46 |
| MS.gene061188 | MS.gene33836 | 0.841818 | 3.77E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 131 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTCTTGCTGATTCTGATTT+AGG | 0.105225 | 4.3:-22593378 | MS.gene33836:intron |
| ATGGCTTCTATGCAGGTTTA+AGG | 0.151032 | 4.3:-22592792 | MS.gene33836:CDS |
| TTTGGCTTGGCAAAGATATT+TGG | 0.160241 | 4.3:-22591752 | MS.gene33836:CDS |
| ACCTAATATTATCCCAATTT+TGG | 0.183699 | 4.3:+22592850 | None:intergenic |
| AGATAACTTCCTGTCATATT+TGG | 0.186879 | 4.3:+22593970 | None:intergenic |
| TCTTCTACTTCCAACATTAA+TGG | 0.197108 | 4.3:-22592644 | MS.gene33836:CDS |
| AGAAATCTTGTTAGACTATT+AGG | 0.202134 | 4.3:-22592136 | MS.gene33836:CDS |
| AGTTTGGACCGCTTCTTATT+TGG | 0.207888 | 4.3:-22592058 | MS.gene33836:intron |
| AGTTTATGCAAATGCATAAA+AGG | 0.208208 | 4.3:-22593718 | MS.gene33836:CDS |
| AGACCTTCCATTGCGTATTC+TGG | 0.219213 | 4.3:+22591565 | None:intergenic |
| TTTCTCTATCTGAAAGAATA+AGG | 0.250076 | 4.3:+22594247 | None:intergenic |
| ACCAAAATTGGGATAATATT+AGG | 0.259760 | 4.3:-22592851 | MS.gene33836:CDS |
| TGTTATCAGGGAAGGCTTCC+AGG | 0.269600 | 4.3:-22592256 | MS.gene33836:intron |
| TGAAAGTTCTGCATATTTAG+AGG | 0.275016 | 4.3:+22592536 | None:intergenic |
| GAAGGTGGAGAAGTGGTTAT+TGG | 0.289128 | 4.3:-22594017 | MS.gene33836:CDS |
| TAAAACTCACACTTCTTATT+AGG | 0.290995 | 4.3:+22593784 | None:intergenic |
| TTGGCTTGGCAAAGATATTT+GGG | 0.291035 | 4.3:-22591751 | MS.gene33836:CDS |
| ACTGCTTATGTAAATGCTAT+TGG | 0.316226 | 4.3:-22593477 | MS.gene33836:CDS |
| CAAGCTTGGACAAGGGGATT+TGG | 0.316986 | 4.3:-22592460 | MS.gene33836:CDS |
| AGGCTTAACACAAATGATAA+TGG | 0.317693 | 4.3:-22593937 | MS.gene33836:CDS |
| TATGTAAATGCTATTGGAAT+TGG | 0.322204 | 4.3:-22593471 | MS.gene33836:CDS |
| AAATCTGATGTCTATAGTTT+TGG | 0.338895 | 4.3:-22591532 | MS.gene33836:CDS |
| GCGAGTGGTGAAAGAGGAAT+TGG | 0.348462 | 4.3:-22594156 | MS.gene33836:CDS |
| TCTGCCTTGGAATCTTTGTA+TGG | 0.364727 | 4.3:-22592811 | MS.gene33836:CDS |
| CTCTTGATTTGTTCAGAAAC+TGG | 0.367737 | 4.3:+22592614 | None:intergenic |
| TTGGGTGTATGGTTTGGCAT+GGG | 0.368300 | 4.3:-22593452 | MS.gene33836:CDS |
| GAGAAAATAACAAAGAGATT+TGG | 0.380176 | 4.3:-22594230 | MS.gene33836:CDS |
| AAGGTGGAGAAGTGGTTATT+GGG | 0.381256 | 4.3:-22594016 | MS.gene33836:CDS |
| ATACATGCCAAACAAAAGTT+TGG | 0.383019 | 4.3:-22592074 | MS.gene33836:CDS |
| GAGAGAAGTGGTAATAGTTC+TGG | 0.384889 | 4.3:-22593615 | MS.gene33836:CDS |
| TCGGAGAACAATCCTTCATT+AGG | 0.385469 | 4.3:-22594105 | MS.gene33836:CDS |
| ACGTTACTTCAGCTTATGTT+TGG | 0.386398 | 4.3:-22594434 | None:intergenic |
| CAAGCTGTTCTTCATAATGA+TGG | 0.390023 | 4.3:-22594273 | MS.gene33836:CDS |
| CGTTACTTCAGCTTATGTTT+GGG | 0.390613 | 4.3:-22594433 | None:intergenic |
| ATTGTATAGTTTCCTAATGA+AGG | 0.396776 | 4.3:+22594093 | None:intergenic |
| ATCGCCACAGATAGTGATTA+TGG | 0.397789 | 4.3:-22594052 | MS.gene33836:CDS |
| GGTAACTTAGTTGTTCTTGA+TGG | 0.406855 | 4.3:-22594351 | MS.gene33836:CDS |
| GGTGAGTGCTGTTGATAGTA+AGG | 0.410064 | 4.3:-22593535 | MS.gene33836:CDS |
| TTGGAATTGGGTGTATGGTT+TGG | 0.412293 | 4.3:-22593458 | MS.gene33836:CDS |
| ATAATATTAGGTGTTGTGGC+GGG | 0.413363 | 4.3:-22592839 | MS.gene33836:CDS |
| ATGGACAAAACAACGAGGTT+TGG | 0.414463 | 4.3:-22594332 | MS.gene33836:CDS |
| TGCTATTGGAATTGGGTGTA+TGG | 0.415832 | 4.3:-22593463 | MS.gene33836:CDS |
| CCAACTGATACATATCTTCC+AGG | 0.419031 | 4.3:-22594192 | MS.gene33836:CDS |
| CCACTTCTCTCACCCTTCAA+TGG | 0.421496 | 4.3:+22593627 | None:intergenic |
| TGGCTTCTATGCAGGTTTAA+GGG | 0.422399 | 4.3:-22592791 | MS.gene33836:CDS |
| GGGAATACAGAGAGAGTAGT+TGG | 0.424899 | 4.3:-22591713 | MS.gene33836:CDS |
| AGGTTTCAGCTTGGATATGA+TGG | 0.425381 | 4.3:-22593868 | MS.gene33836:CDS |
| TCTTTGTATGGCTTCTATGC+AGG | 0.432342 | 4.3:-22592799 | MS.gene33836:CDS |
| AAGTTTGGAATAGTGGGAAT+TGG | 0.434601 | 4.3:-22593674 | MS.gene33836:intron |
| TCTTCCAGGTATGAAAGTTC+CGG | 0.442337 | 4.3:-22594178 | MS.gene33836:CDS |
| AATAGTTCTGGTGGAGAAGA+TGG | 0.445032 | 4.3:-22593603 | MS.gene33836:CDS |
| TACATATTTACCTTGTAGAC+AGG | 0.447834 | 4.3:+22592436 | None:intergenic |
| TGGGTGTATGGTTTGGCATG+GGG | 0.448597 | 4.3:-22593451 | MS.gene33836:CDS |
| GTGGCGGGGCTTATCTGCCT+TGG | 0.451943 | 4.3:-22592824 | MS.gene33836:CDS |
| TTCTCAGAAGAAAACAAGCT+TGG | 0.454400 | 4.3:-22592474 | MS.gene33836:intron |
| GGAATGAAGAAGAGAAAGAA+TGG | 0.455248 | 4.3:-22593825 | MS.gene33836:CDS |
| CTCACCAAACGTGCAAAATC+AGG | 0.456111 | 4.3:+22593552 | None:intergenic |
| TGGAAGGAGAGAACAGAAGG+TGG | 0.457309 | 4.3:-22594032 | MS.gene33836:CDS |
| GTTTATGCAAATGCATAAAA+GGG | 0.459026 | 4.3:-22593717 | MS.gene33836:intron |
| GAGAACAGAAGGTGGAGAAG+TGG | 0.460299 | 4.3:-22594024 | MS.gene33836:CDS |
| ATTGGGTGTATGGTTTGGCA+TGG | 0.463922 | 4.3:-22593453 | MS.gene33836:CDS |
| ATGTAAATGCTATTGGAATT+GGG | 0.464111 | 4.3:-22593470 | MS.gene33836:CDS |
| ATTGGTCAAAAGGGTGTAAG+AGG | 0.473400 | 4.3:-22593656 | MS.gene33836:CDS |
| ATGGATATGAGAGACAATTC+AGG | 0.482662 | 4.3:-22593849 | MS.gene33836:CDS |
| CTATTAGGATGTTCAATTGA+AGG | 0.490149 | 4.3:-22592121 | MS.gene33836:CDS |
| TATTAGGATGTTCAATTGAA+GGG | 0.490646 | 4.3:-22592120 | MS.gene33836:CDS |
| TAAGAGGATGACTCCATTGA+AGG | 0.493490 | 4.3:-22593640 | MS.gene33836:CDS |
| TAATATTAGGTGTTGTGGCG+GGG | 0.497816 | 4.3:-22592838 | MS.gene33836:CDS |
| GTTATCAGGGAAGGCTTCCA+GGG | 0.507606 | 4.3:-22592255 | MS.gene33836:intron |
| GTTCAAAGGTTAGAAAATCA+AGG | 0.510113 | 4.3:-22593417 | MS.gene33836:CDS |
| AATAGTGGGAATTGGTCAAA+AGG | 0.511482 | 4.3:-22593666 | MS.gene33836:intron |
| CAATCGATCTTCACTTAGAC+GGG | 0.520998 | 4.3:-22592562 | MS.gene33836:CDS |
| AAGAGTGGAAACTTATCAGC+AGG | 0.524080 | 4.3:-22592596 | MS.gene33836:CDS |
| TGGGATAATATTAGGTGTTG+TGG | 0.524718 | 4.3:-22592843 | MS.gene33836:CDS |
| TGGAAAATAGTGATGAGGTA+AGG | 0.527720 | 4.3:-22593888 | MS.gene33836:CDS |
| CCTGGAAGATATGTATCAGT+TGG | 0.530853 | 4.3:+22594192 | None:intergenic |
| TCTTGAACTCATCTAAACCT+TGG | 0.532182 | 4.3:+22592191 | None:intergenic |
| AGAAGTGGTAATAGTTCTGG+TGG | 0.533157 | 4.3:-22593612 | MS.gene33836:CDS |
| TTATGGAAGGAGAGAACAGA+AGG | 0.537941 | 4.3:-22594035 | MS.gene33836:CDS |
| CTCGCCGGAACTTTCATACC+TGG | 0.538981 | 4.3:+22594174 | None:intergenic |
| ACACAAATGATAATGGAGAA+AGG | 0.548575 | 4.3:-22593930 | MS.gene33836:CDS |
| GAAGAAAACAAGCTTGGACA+AGG | 0.549005 | 4.3:-22592468 | MS.gene33836:CDS |
| GGGAGTTAGTCGATGTTCAA+AGG | 0.554447 | 4.3:-22593431 | MS.gene33836:CDS |
| ATTCCTCTTTCACCACTCGC+CGG | 0.555225 | 4.3:+22594159 | None:intergenic |
| TCAATCGATCTTCACTTAGA+CGG | 0.556240 | 4.3:-22592563 | MS.gene33836:CDS |
| GGGATTTGGTCCTGTCTACA+AGG | 0.556272 | 4.3:-22592446 | MS.gene33836:intron |
| TGGAGAAGTGGTTATTGGGA+TGG | 0.556952 | 4.3:-22594012 | MS.gene33836:CDS |
| GAAAGTTCTGCATATTTAGA+GGG | 0.558216 | 4.3:+22592537 | None:intergenic |
| GTTGGAAGTAGAAGAAGTTG+AGG | 0.558217 | 4.3:+22592652 | None:intergenic |
| TGTCTTCAAATACAGGTGAT+GGG | 0.560455 | 4.3:-22592883 | MS.gene33836:intron |
| CGAGTGGTGAAAGAGGAATT+GGG | 0.560859 | 4.3:-22594155 | MS.gene33836:CDS |
| AAGCTGTTCTTCATAATGAT+GGG | 0.562415 | 4.3:-22594272 | MS.gene33836:CDS |
| AAGAAAACAAGCTTGGACAA+GGG | 0.569546 | 4.3:-22592467 | MS.gene33836:CDS |
| GTTCCGGCGAGTGGTGAAAG+AGG | 0.571699 | 4.3:-22594162 | MS.gene33836:CDS |
| TGGTAGATCACCATTAATGT+TGG | 0.572874 | 4.3:+22592634 | None:intergenic |
| GAGAACAAATTGCGGTGAAG+AGG | 0.573876 | 4.3:-22592231 | MS.gene33836:CDS |
| TTATTCTAAGACGTGAATCT+CGG | 0.578070 | 4.3:+22591840 | None:intergenic |
| AGAAAACAAGCTTGGACAAG+GGG | 0.580661 | 4.3:-22592466 | MS.gene33836:CDS |
| ATAGTGGGAATTGGTCAAAA+GGG | 0.584139 | 4.3:-22593665 | MS.gene33836:intron |
| GGCTTGGCAAAGATATTTGG+GGG | 0.585019 | 4.3:-22591749 | MS.gene33836:CDS |
| GATAATATTAGGTGTTGTGG+CGG | 0.585902 | 4.3:-22592840 | MS.gene33836:CDS |
| GATGAGGTAAGGTTTCAGCT+TGG | 0.592182 | 4.3:-22593877 | MS.gene33836:CDS |
| ATTAGGATGTTCAATTGAAG+GGG | 0.592407 | 4.3:-22592119 | MS.gene33836:CDS |
| GAAGCCATACAAAGATTCCA+AGG | 0.592993 | 4.3:+22592807 | None:intergenic |
| TGGTGAAAGAGGAATTGGGA+AGG | 0.594970 | 4.3:-22594151 | MS.gene33836:CDS |
| TGGCTTGGCAAAGATATTTG+GGG | 0.601658 | 4.3:-22591750 | MS.gene33836:CDS |
| GTTTCTGAACAAATCAAGAG+TGG | 0.609571 | 4.3:-22592611 | MS.gene33836:CDS |
| ACAGGTGTACCAAATATGAC+AGG | 0.610875 | 4.3:-22593979 | MS.gene33836:CDS |
| TCTCCAGAATACGCAATGGA+AGG | 0.614249 | 4.3:-22591568 | MS.gene33836:CDS |
| GAAACATACCAAATAAGAAG+CGG | 0.614295 | 4.3:+22592050 | None:intergenic |
| CTTTCTAGACAGTCGAACCA+AGG | 0.614432 | 4.3:-22592208 | MS.gene33836:CDS |
| TGTTGATAGTAAGGATTGTG+AGG | 0.617666 | 4.3:-22593526 | MS.gene33836:CDS |
| CCACAGATAGTGATTATGGA+AGG | 0.628416 | 4.3:-22594048 | MS.gene33836:CDS |
| ATCATCGAGGGCATTGCAAG+AGG | 0.629025 | 4.3:-22591878 | MS.gene33836:CDS |
| TTATCAGGGAAGGCTTCCAG+GGG | 0.631002 | 4.3:-22592254 | MS.gene33836:intron |
| AGGTTTAAGGGAAAACTCAA+AGG | 0.631879 | 4.3:-22592779 | MS.gene33836:intron |
| GGTATGAAAGTTCCGGCGAG+TGG | 0.632318 | 4.3:-22594171 | MS.gene33836:CDS |
| AAGAGGATGACTCCATTGAA+GGG | 0.635698 | 4.3:-22593639 | MS.gene33836:CDS |
| TATGTCTCCAGAATACGCAA+TGG | 0.647640 | 4.3:-22591572 | MS.gene33836:CDS |
| AGCATTGGAAAATAGTGATG+AGG | 0.647737 | 4.3:-22593893 | MS.gene33836:CDS |
| CCTTCCATAATCACTATCTG+TGG | 0.652212 | 4.3:+22594048 | None:intergenic |
| GATATGAGAGACAATTCAGG+TGG | 0.659141 | 4.3:-22593846 | MS.gene33836:CDS |
| AGGAAACTATACAATGAGTG+TGG | 0.664588 | 4.3:-22594085 | MS.gene33836:CDS |
| CCATTGAAGGGTGAGAGAAG+TGG | 0.673497 | 4.3:-22593627 | MS.gene33836:CDS |
| CAAAACTAGACAGCTCAAGA+CGG | 0.676554 | 4.3:-22591907 | MS.gene33836:CDS |
| AGACGGTATGAAATCATCGA+GGG | 0.695939 | 4.3:-22591890 | MS.gene33836:CDS |
| CTACTACTAGAGATTGTGAG+TGG | 0.699432 | 4.3:-22591505 | MS.gene33836:CDS |
| GTTGATAGTAAGGATTGTGA+GGG | 0.706220 | 4.3:-22593525 | MS.gene33836:CDS |
| AAGACGGTATGAAATCATCG+AGG | 0.727889 | 4.3:-22591891 | MS.gene33836:CDS |
| TATCAGGGAAGGCTTCCAGG+GGG | 0.744347 | 4.3:-22592253 | MS.gene33836:intron |
| TCTTGATGGACAAAACAACG+AGG | 0.787947 | 4.3:-22594337 | MS.gene33836:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTATTTTCAGATTATTA+TGG | - | chr4.3:22593587-22593606 | MS.gene33836:CDS | 10.0% |
| !! | AAACTAATAAATGGAAAATA+AGG | + | chr4.3:22592579-22592598 | None:intergenic | 15.0% |
| !! | AGTTGTAAAAAAGTTATTAA+TGG | + | chr4.3:22592679-22592698 | None:intergenic | 15.0% |
| !!! | AATTTTCAGCATTTTAAATT+TGG | - | chr4.3:22593901-22593920 | MS.gene33836:CDS | 15.0% |
| !!! | TATTTTAACATAATACAGAA+AGG | + | chr4.3:22593511-22593530 | None:intergenic | 15.0% |
| !! | AAAATTGGGAAACTAATAAA+TGG | + | chr4.3:22592588-22592607 | None:intergenic | 20.0% |
| !! | AAGAGAAAATAATAAACTTG+AGG | + | chr4.3:22593169-22593188 | None:intergenic | 20.0% |
| !! | TAAAAATGAGTGTTACATTT+GGG | + | chr4.3:22593543-22593562 | None:intergenic | 20.0% |
| !! | TAAATTTACATGTTTGAATC+AGG | + | chr4.3:22593573-22593592 | None:intergenic | 20.0% |
| !! | TCTGTTACAATAAAAAATGA+TGG | - | chr4.3:22591536-22591555 | MS.gene33836:CDS | 20.0% |
| !! | TTAAAAATGAGTGTTACATT+TGG | + | chr4.3:22593544-22593563 | None:intergenic | 20.0% |
| !! | TTAAGTACCAAAATTACATT+GGG | + | chr4.3:22592838-22592857 | None:intergenic | 20.0% |
| !!! | ATTTTTATGTCTTCAAATAC+AGG | - | chr4.3:22593018-22593037 | MS.gene33836:intron | 20.0% |
| !!! | TGTAACACTCATTTTTAATT+TGG | - | chr4.3:22593546-22593565 | MS.gene33836:CDS | 20.0% |
| ! | AAACCAATTAAAAACAGAGA+AGG | - | chr4.3:22591512-22591531 | MS.gene33836:CDS | 25.0% |
| ! | AATCCAAAAATTTCAGACTT+TGG | - | chr4.3:22594138-22594157 | MS.gene33836:CDS | 25.0% |
| ! | ACCAAAATTGGGATAATATT+AGG | - | chr4.3:22593057-22593076 | MS.gene33836:intron | 25.0% |
| ! | AGAAATCTTGTTAGACTATT+AGG | - | chr4.3:22593772-22593791 | MS.gene33836:CDS | 25.0% |
| ! | AGTTTATGCAAATGCATAAA+AGG | - | chr4.3:22592190-22592209 | MS.gene33836:CDS | 25.0% |
| ! | ATGTAAATGCTATTGGAATT+GGG | - | chr4.3:22592438-22592457 | MS.gene33836:intron | 25.0% |
| ! | ATTGTATAGTTTCCTAATGA+AGG | + | chr4.3:22591818-22591837 | None:intergenic | 25.0% |
| ! | GAGAAAATAACAAAGAGATT+TGG | - | chr4.3:22591678-22591697 | MS.gene33836:intron | 25.0% |
| ! | GTTAAGTACCAAAATTACAT+TGG | + | chr4.3:22592839-22592858 | None:intergenic | 25.0% |
| ! | GTTTATGCAAATGCATAAAA+GGG | - | chr4.3:22592191-22592210 | MS.gene33836:CDS | 25.0% |
| ! | TAAAACTCACACTTCTTATT+AGG | + | chr4.3:22592127-22592146 | None:intergenic | 25.0% |
| ! | TATGTAAATGCTATTGGAAT+TGG | - | chr4.3:22592437-22592456 | MS.gene33836:intron | 25.0% |
| ! | TATTAGGATGTTCAATTGAA+GGG | - | chr4.3:22593788-22593807 | MS.gene33836:CDS | 25.0% |
| ! | TGATTCTAGTAAGAATTAAG+AGG | + | chr4.3:22594272-22594291 | None:intergenic | 25.0% |
| ! | TGTTGTGTATGAATAAGATA+TGG | - | chr4.3:22592901-22592920 | MS.gene33836:intron | 25.0% |
| ! | TTTCTCTATCTGAAAGAATA+AGG | + | chr4.3:22591664-22591683 | None:intergenic | 25.0% |
| !! | AAATCTGATGTCTATAGTTT+TGG | - | chr4.3:22594376-22594395 | MS.gene33836:CDS | 25.0% |
| !! | ACCTAATATTATCCCAATTT+TGG | + | chr4.3:22593061-22593080 | None:intergenic | 25.0% |
| !! | GTATTTTGTATATGAAGCAT+TGG | - | chr4.3:22592000-22592019 | MS.gene33836:intron | 25.0% |
| !!! | GAAGTTATCTTTTTGGTTTT+AGG | - | chr4.3:22591951-22591970 | MS.gene33836:intron | 25.0% |
| !!! | TACTTTTTGTTCATGGAAAT+CGG | - | chr4.3:22591784-22591803 | MS.gene33836:CDS | 25.0% |
| !!! | TCACTTTTATTCTGTTATCA+GGG | - | chr4.3:22593640-22593659 | MS.gene33836:CDS | 25.0% |
| !!! | TGTGAGTTTTATAATTCATG+TGG | - | chr4.3:22592136-22592155 | MS.gene33836:CDS | 25.0% |
| !!! | TTCACTTTTATTCTGTTATC+AGG | - | chr4.3:22593639-22593658 | MS.gene33836:CDS | 25.0% |
| AAAAATTTCAGACTTTGGCT+TGG | - | chr4.3:22594143-22594162 | MS.gene33836:CDS | 30.0% | |
| AAACTGTGGGAAAATAGAAA+AGG | + | chr4.3:22593236-22593255 | None:intergenic | 30.0% | |
| AAGCTGTTCTTCATAATGAT+GGG | - | chr4.3:22591636-22591655 | MS.gene33836:intron | 30.0% | |
| ACTGCTTATGTAAATGCTAT+TGG | - | chr4.3:22592431-22592450 | MS.gene33836:intron | 30.0% | |
| AGATAACTTCCTGTCATATT+TGG | + | chr4.3:22591941-22591960 | None:intergenic | 30.0% | |
| AGGCTTAACACAAATGATAA+TGG | - | chr4.3:22591971-22591990 | MS.gene33836:intron | 30.0% | |
| ATACATGCCAAACAAAAGTT+TGG | - | chr4.3:22593834-22593853 | MS.gene33836:CDS | 30.0% | |
| ATCATAGATTCTAGTGACTT+GGG | + | chr4.3:22592961-22592980 | None:intergenic | 30.0% | |
| ATTAGGATGTTCAATTGAAG+GGG | - | chr4.3:22593789-22593808 | MS.gene33836:CDS | 30.0% | |
| ATTGATGTGTGCATCAAAAT+TGG | + | chr4.3:22592603-22592622 | None:intergenic | 30.0% | |
| CTATTAGGATGTTCAATTGA+AGG | - | chr4.3:22593787-22593806 | MS.gene33836:CDS | 30.0% | |
| GAAACATACCAAATAAGAAG+CGG | + | chr4.3:22593861-22593880 | None:intergenic | 30.0% | |
| GAAAGTTCTGCATATTTAGA+GGG | + | chr4.3:22593374-22593393 | None:intergenic | 30.0% | |
| GGAAGAAAAAGACCAAAATT+GGG | - | chr4.3:22593046-22593065 | MS.gene33836:intron | 30.0% | |
| GTTCAAAGGTTAGAAAATCA+AGG | - | chr4.3:22592491-22592510 | MS.gene33836:intron | 30.0% | |
| TACATATTTACCTTGTAGAC+AGG | + | chr4.3:22593475-22593494 | None:intergenic | 30.0% | |
| TCTTCTACTTCCAACATTAA+TGG | - | chr4.3:22593264-22593283 | MS.gene33836:intron | 30.0% | |
| TGAAAGTTCTGCATATTTAG+AGG | + | chr4.3:22593375-22593394 | None:intergenic | 30.0% | |
| TTGATGTGTGCATCAAAATT+GGG | + | chr4.3:22592602-22592621 | None:intergenic | 30.0% | |
| TTTATACTCTCTCTTAAGCA+AGG | + | chr4.3:22592800-22592819 | None:intergenic | 30.0% | |
| TTTCTCTTTGATGAATCACT+AGG | - | chr4.3:22593181-22593200 | MS.gene33836:intron | 30.0% | |
| ! | AAAAGCAAGCAACATTTTGT+TGG | - | chr4.3:22594104-22594123 | MS.gene33836:CDS | 30.0% |
| ! | ATGACAGGAAGTTATCTTTT+TGG | - | chr4.3:22591944-22591963 | MS.gene33836:intron | 30.0% |
| ! | ATGTGAAAAGTTTGGAATAG+TGG | - | chr4.3:22592227-22592246 | MS.gene33836:CDS | 30.0% |
| ! | TGTGAAAAGTTTGGAATAGT+GGG | - | chr4.3:22592228-22592247 | MS.gene33836:CDS | 30.0% |
| ! | TTTTATTCTGTTATCAGGGA+AGG | - | chr4.3:22593644-22593663 | MS.gene33836:CDS | 30.0% |
| !! | AAGCCAAAGTCTGAAATTTT+TGG | + | chr4.3:22594144-22594163 | None:intergenic | 30.0% |
| !! | ACACAAATGATAATGGAGAA+AGG | - | chr4.3:22591978-22591997 | MS.gene33836:intron | 30.0% |
| !! | TTATTCTAAGACGTGAATCT+CGG | + | chr4.3:22594071-22594090 | None:intergenic | 30.0% |
| !!! | GAACCTTCTCTGTTTTTAAT+TGG | + | chr4.3:22591518-22591537 | None:intergenic | 30.0% |
| !!! | TCTAGTTTTGTTTTCTTGAC+TGG | + | chr4.3:22593991-22594010 | None:intergenic | 30.0% |
| AAGAAAACAAGCTTGGACAA+GGG | - | chr4.3:22593441-22593460 | MS.gene33836:CDS | 35.0% | |
| AATATAACCCTATGTGTACG+TGG | - | chr4.3:22594302-22594321 | MS.gene33836:CDS | 35.0% | |
| ACCAAAGGATGTGAAAAGTT+TGG | - | chr4.3:22592219-22592238 | MS.gene33836:CDS | 35.0% | |
| AGGAAACTATACAATGAGTG+TGG | - | chr4.3:22591823-22591842 | MS.gene33836:CDS | 35.0% | |
| AGGTTTAAGGGAAAACTCAA+AGG | - | chr4.3:22593129-22593148 | MS.gene33836:intron | 35.0% | |
| ATGGATATGAGAGACAATTC+AGG | - | chr4.3:22592059-22592078 | MS.gene33836:CDS | 35.0% | |
| ATGTCTTCAAATACAGGTGA+TGG | - | chr4.3:22593024-22593043 | MS.gene33836:intron | 35.0% | |
| CAAGCTGTTCTTCATAATGA+TGG | - | chr4.3:22591635-22591654 | MS.gene33836:intron | 35.0% | |
| CAGCACATTTGCATAACAAT+CGG | - | chr4.3:22593945-22593964 | MS.gene33836:CDS | 35.0% | |
| CATAAAAGGGTTTGAACCAA+AGG | - | chr4.3:22592204-22592223 | MS.gene33836:CDS | 35.0% | |
| CATCATAGATTCTAGTGACT+TGG | + | chr4.3:22592962-22592981 | None:intergenic | 35.0% | |
| CTGGTTGACCATCTTTAATT+GGG | - | chr4.3:22592744-22592763 | MS.gene33836:intron | 35.0% | |
| GGAATGAAGAAGAGAAAGAA+TGG | - | chr4.3:22592083-22592102 | MS.gene33836:CDS | 35.0% | |
| GGGAAGAAAAAGACCAAAAT+TGG | - | chr4.3:22593045-22593064 | MS.gene33836:intron | 35.0% | |
| GGTAACTTAGTTGTTCTTGA+TGG | - | chr4.3:22591557-22591576 | MS.gene33836:CDS | 35.0% | |
| GTTTCTGAACAAATCAAGAG+TGG | - | chr4.3:22593297-22593316 | MS.gene33836:intron | 35.0% | |
| TCAATCGATCTTCACTTAGA+CGG | - | chr4.3:22593345-22593364 | MS.gene33836:intron | 35.0% | |
| TCACTAGAATCTATGATGTC+AGG | - | chr4.3:22592964-22592983 | MS.gene33836:intron | 35.0% | |
| TCTGGTTGACCATCTTTAAT+TGG | - | chr4.3:22592743-22592762 | MS.gene33836:intron | 35.0% | |
| TCTTGAACTCATCTAAACCT+TGG | + | chr4.3:22593720-22593739 | None:intergenic | 35.0% | |
| TGGAAAATAGTGATGAGGTA+AGG | - | chr4.3:22592020-22592039 | MS.gene33836:intron | 35.0% | |
| TGGTAGATCACCATTAATGT+TGG | + | chr4.3:22593277-22593296 | None:intergenic | 35.0% | |
| TGTCTTCAAATACAGGTGAT+GGG | - | chr4.3:22593025-22593044 | MS.gene33836:intron | 35.0% | |
| TTCTCAGAAGAAAACAAGCT+TGG | - | chr4.3:22593434-22593453 | MS.gene33836:CDS | 35.0% | |
| TTGGGGGAAATCAAAATGAA+GGG | - | chr4.3:22594175-22594194 | MS.gene33836:CDS | 35.0% | |
| TTTGGGGGAAATCAAAATGA+AGG | - | chr4.3:22594174-22594193 | MS.gene33836:CDS | 35.0% | |
| ! | AACTTATCAGCAGGATTTTC+AGG | - | chr4.3:22593321-22593340 | MS.gene33836:intron | 35.0% |
| ! | AAGTTTGGAATAGTGGGAAT+TGG | - | chr4.3:22592234-22592253 | MS.gene33836:CDS | 35.0% |
| ! | AATAGTGGGAATTGGTCAAA+AGG | - | chr4.3:22592242-22592261 | MS.gene33836:CDS | 35.0% |
| ! | AGCATTGGAAAATAGTGATG+AGG | - | chr4.3:22592015-22592034 | MS.gene33836:intron | 35.0% |
| ! | ATAATATTAGGTGTTGTGGC+GGG | - | chr4.3:22593069-22593088 | MS.gene33836:intron | 35.0% |
| ! | ATAGTGGGAATTGGTCAAAA+GGG | - | chr4.3:22592243-22592262 | MS.gene33836:CDS | 35.0% |
| ! | GATAATATTAGGTGTTGTGG+CGG | - | chr4.3:22593068-22593087 | MS.gene33836:intron | 35.0% |
| ! | TCCAAACTTTTCACATCCTT+TGG | + | chr4.3:22592223-22592242 | None:intergenic | 35.0% |
| ! | TGGGATAATATTAGGTGTTG+TGG | - | chr4.3:22593065-22593084 | MS.gene33836:intron | 35.0% |
| !! | CTCTTGATTTGTTCAGAAAC+TGG | + | chr4.3:22593297-22593316 | None:intergenic | 35.0% |
| !! | GTTGATAGTAAGGATTGTGA+GGG | - | chr4.3:22592383-22592402 | MS.gene33836:intron | 35.0% |
| !! | TGCATAACAATCGGTTTTTC+TGG | - | chr4.3:22593954-22593973 | MS.gene33836:CDS | 35.0% |
| !! | TGTTGATAGTAAGGATTGTG+AGG | - | chr4.3:22592382-22592401 | MS.gene33836:intron | 35.0% |
| !! | TTGGCTTGGCAAAGATATTT+GGG | - | chr4.3:22594157-22594176 | MS.gene33836:CDS | 35.0% |
| !! | TTTGGCTTGGCAAAGATATT+TGG | - | chr4.3:22594156-22594175 | MS.gene33836:CDS | 35.0% |
| !!! | AAGATGGTTTTTTGGTGCAA+AGG | - | chr4.3:22592321-22592340 | MS.gene33836:intron | 35.0% |
| !!! | AGGATGCTACTTTTTGTTCA+TGG | - | chr4.3:22591777-22591796 | MS.gene33836:CDS | 35.0% |
| AACTTGAGTGAGATATGCTG+AGG | + | chr4.3:22592936-22592955 | None:intergenic | 40.0% | |
| AAGACGGTATGAAATCATCG+AGG | - | chr4.3:22594017-22594036 | MS.gene33836:CDS | 40.0% | |
| AAGAGGATGACTCCATTGAA+GGG | - | chr4.3:22592269-22592288 | MS.gene33836:intron | 40.0% | |
| AAGAGTGGAAACTTATCAGC+AGG | - | chr4.3:22593312-22593331 | MS.gene33836:intron | 40.0% | |
| AAGGTGGAGAAGTGGTTATT+GGG | - | chr4.3:22591892-22591911 | MS.gene33836:CDS | 40.0% | |
| ACAGGTGTACCAAATATGAC+AGG | - | chr4.3:22591929-22591948 | MS.gene33836:intron | 40.0% | |
| AGAAAACAAGCTTGGACAAG+GGG | - | chr4.3:22593442-22593461 | MS.gene33836:CDS | 40.0% | |
| AGAAGAAGTTGAGGAAACTG+TGG | + | chr4.3:22593250-22593269 | None:intergenic | 40.0% | |
| AGACGGTATGAAATCATCGA+GGG | - | chr4.3:22594018-22594037 | MS.gene33836:CDS | 40.0% | |
| AGGTTTCAGCTTGGATATGA+TGG | - | chr4.3:22592040-22592059 | MS.gene33836:intron | 40.0% | |
| AGTTTGGACCGCTTCTTATT+TGG | - | chr4.3:22593850-22593869 | MS.gene33836:CDS | 40.0% | |
| ATCGCCACAGATAGTGATTA+TGG | - | chr4.3:22591856-22591875 | MS.gene33836:CDS | 40.0% | |
| ATGGACAAAACAACGAGGTT+TGG | - | chr4.3:22591576-22591595 | MS.gene33836:CDS | 40.0% | |
| ATGGCTTCTATGCAGGTTTA+AGG | - | chr4.3:22593116-22593135 | MS.gene33836:intron | 40.0% | |
| CAAAACTAGACAGCTCAAGA+CGG | - | chr4.3:22594001-22594020 | MS.gene33836:CDS | 40.0% | |
| CAATCGATCTTCACTTAGAC+GGG | - | chr4.3:22593346-22593365 | MS.gene33836:intron | 40.0% | |
| CCAACTGATACATATCTTCC+AGG | - | chr4.3:22591716-22591735 | MS.gene33836:CDS | 40.0% | |
| CCACAGATAGTGATTATGGA+AGG | - | chr4.3:22591860-22591879 | MS.gene33836:CDS | 40.0% | |
| CCTGGAAGATATGTATCAGT+TGG | + | chr4.3:22591719-22591738 | None:intergenic | 40.0% | |
| CCTTCCATAATCACTATCTG+TGG | + | chr4.3:22591863-22591882 | None:intergenic | 40.0% | |
| CTAATTTCCGTCAGGAAATC+TGG | - | chr4.3:22592725-22592744 | MS.gene33836:intron | 40.0% | |
| CTACTACTAGAGATTGTGAG+TGG | - | chr4.3:22594403-22594422 | MS.gene33836:CDS | 40.0% | |
| CTGTTTGCAACCCAAACATA+AGG | + | chr4.3:22591488-22591507 | None:intergenic | 40.0% | |
| GAAGAAAACAAGCTTGGACA+AGG | - | chr4.3:22593440-22593459 | MS.gene33836:CDS | 40.0% | |
| GAAGAAGTTGAGGAAACTGT+GGG | + | chr4.3:22593249-22593268 | None:intergenic | 40.0% | |
| GAAGCCATACAAAGATTCCA+AGG | + | chr4.3:22593104-22593123 | None:intergenic | 40.0% | |
| GAGAGAAGTGGTAATAGTTC+TGG | - | chr4.3:22592293-22592312 | MS.gene33836:intron | 40.0% | |
| GATATGAGAGACAATTCAGG+TGG | - | chr4.3:22592062-22592081 | MS.gene33836:CDS | 40.0% | |
| GTTGGAAGTAGAAGAAGTTG+AGG | + | chr4.3:22593259-22593278 | None:intergenic | 40.0% | |
| TAAGAGGATGACTCCATTGA+AGG | - | chr4.3:22592268-22592287 | MS.gene33836:intron | 40.0% | |
| TATGTCTCCAGAATACGCAA+TGG | - | chr4.3:22594336-22594355 | MS.gene33836:CDS | 40.0% | |
| TCCTGACGGAAATTAGTCAT+CGG | + | chr4.3:22592721-22592740 | None:intergenic | 40.0% | |
| TCGGAGAACAATCCTTCATT+AGG | - | chr4.3:22591803-22591822 | MS.gene33836:CDS | 40.0% | |
| TCTCTCTTAAGCAAGGTTTC+AGG | + | chr4.3:22592793-22592812 | None:intergenic | 40.0% | |
| TCTGCCTTGGAATCTTTGTA+TGG | - | chr4.3:22593097-22593116 | MS.gene33836:intron | 40.0% | |
| TCTTCCAGGTATGAAAGTTC+CGG | - | chr4.3:22591730-22591749 | MS.gene33836:CDS | 40.0% | |
| TCTTTGTATGGCTTCTATGC+AGG | - | chr4.3:22593109-22593128 | MS.gene33836:intron | 40.0% | |
| TGCTATTGGAATTGGGTGTA+TGG | - | chr4.3:22592445-22592464 | MS.gene33836:intron | 40.0% | |
| TGGCTTCTATGCAGGTTTAA+GGG | - | chr4.3:22593117-22593136 | MS.gene33836:intron | 40.0% | |
| TTATGGAAGGAGAGAACAGA+AGG | - | chr4.3:22591873-22591892 | MS.gene33836:CDS | 40.0% | |
| TTGGAATTGGGTGTATGGTT+TGG | - | chr4.3:22592450-22592469 | MS.gene33836:CDS | 40.0% | |
| ! | AAGCGGTCCAAACTTTTGTT+TGG | + | chr4.3:22593844-22593863 | None:intergenic | 40.0% |
| ! | ATTGGTCAAAAGGGTGTAAG+AGG | - | chr4.3:22592252-22592271 | MS.gene33836:intron | 40.0% |
| ! | CACTCGACCCAATGTAATTT+TGG | - | chr4.3:22592828-22592847 | MS.gene33836:CDS | 40.0% |
| ! | TAATATTAGGTGTTGTGGCG+GGG | - | chr4.3:22593070-22593089 | MS.gene33836:intron | 40.0% |
| ! | TCTTGATGGACAAAACAACG+AGG | - | chr4.3:22591571-22591590 | MS.gene33836:CDS | 40.0% |
| ! | TGGCTTGGCAAAGATATTTG+GGG | - | chr4.3:22594158-22594177 | MS.gene33836:CDS | 40.0% |
| !! | AATAGTTCTGGTGGAGAAGA+TGG | - | chr4.3:22592305-22592324 | MS.gene33836:intron | 40.0% |
| !! | AGAAGTGGTAATAGTTCTGG+TGG | - | chr4.3:22592296-22592315 | MS.gene33836:intron | 40.0% |
| !! | CGTCTTGCTGATTCTGATTT+AGG | - | chr4.3:22592530-22592549 | MS.gene33836:CDS | 40.0% |
| !!! | TGGTGGAGAAGATGGTTTTT+TGG | - | chr4.3:22592313-22592332 | MS.gene33836:intron | 40.0% |
| ACCGATGACTAATTTCCGTC+AGG | - | chr4.3:22592717-22592736 | MS.gene33836:intron | 45.0% | |
| AGACCTTCCATTGCGTATTC+TGG | + | chr4.3:22594346-22594365 | None:intergenic | 45.0% | |
| AGGGGAGACCCAATTAAAGA+TGG | + | chr4.3:22592755-22592774 | None:intergenic | 45.0% | |
| CGAGTGGTGAAAGAGGAATT+GGG | - | chr4.3:22591753-22591772 | MS.gene33836:CDS | 45.0% | |
| CTCACCAAACGTGCAAAATC+AGG | + | chr4.3:22592359-22592378 | None:intergenic | 45.0% | |
| CTTTCTAGACAGTCGAACCA+AGG | - | chr4.3:22593700-22593719 | MS.gene33836:intron | 45.0% | |
| GAAGGTGGAGAAGTGGTTAT+TGG | - | chr4.3:22591891-22591910 | MS.gene33836:CDS | 45.0% | |
| GAGAACAAATTGCGGTGAAG+AGG | - | chr4.3:22593677-22593696 | MS.gene33836:intron | 45.0% | |
| GATGAGGTAAGGTTTCAGCT+TGG | - | chr4.3:22592031-22592050 | MS.gene33836:intron | 45.0% | |
| GGCTTGGCAAAGATATTTGG+GGG | - | chr4.3:22594159-22594178 | MS.gene33836:CDS | 45.0% | |
| GGGAATACAGAGAGAGTAGT+TGG | - | chr4.3:22594195-22594214 | MS.gene33836:CDS | 45.0% | |
| GGGAGTTAGTCGATGTTCAA+AGG | - | chr4.3:22592477-22592496 | MS.gene33836:intron | 45.0% | |
| GTTTCAGGCACAAGCCTAAT+GGG | + | chr4.3:22592778-22592797 | None:intergenic | 45.0% | |
| TCTCCAGAATACGCAATGGA+AGG | - | chr4.3:22594340-22594359 | MS.gene33836:CDS | 45.0% | |
| TGGAGAAGTGGTTATTGGGA+TGG | - | chr4.3:22591896-22591915 | MS.gene33836:CDS | 45.0% | |
| TGGTCAACCAGATTTCCTGA+CGG | + | chr4.3:22592735-22592754 | None:intergenic | 45.0% | |
| TGGTGAAAGAGGAATTGGGA+AGG | - | chr4.3:22591757-22591776 | MS.gene33836:CDS | 45.0% | |
| TTGAGTGAGATATGCTGAGG+AGG | + | chr4.3:22592933-22592952 | None:intergenic | 45.0% | |
| ! | ATTGGGTGTATGGTTTGGCA+TGG | - | chr4.3:22592455-22592474 | MS.gene33836:CDS | 45.0% |
| ! | GTTGCCTGATTTTGCACGTT+TGG | - | chr4.3:22592352-22592371 | MS.gene33836:intron | 45.0% |
| ! | TGGGATGGTAGAGTTTTCAC+AGG | - | chr4.3:22591911-22591930 | MS.gene33836:CDS | 45.0% |
| ! | TTGGGTGTATGGTTTGGCAT+GGG | - | chr4.3:22592456-22592475 | MS.gene33836:CDS | 45.0% |
| !! | GGTGAGTGCTGTTGATAGTA+AGG | - | chr4.3:22592373-22592392 | MS.gene33836:intron | 45.0% |
| !! | AATAATGTATAATATATTAA+TGG | + | chr4.3:22592861-22592880 | None:intergenic | 5.0% |
| ATTCCTCTTTCACCACTCGC+CGG | + | chr4.3:22591752-22591771 | None:intergenic | 50.0% | |
| CAAGCTTGGACAAGGGGATT+TGG | - | chr4.3:22593448-22593467 | MS.gene33836:CDS | 50.0% | |
| CACTGCACCACGTACACATA+GGG | + | chr4.3:22594312-22594331 | None:intergenic | 50.0% | |
| CCACTTCTCTCACCCTTCAA+TGG | + | chr4.3:22592284-22592303 | None:intergenic | 50.0% | |
| CCATTGAAGGGTGAGAGAAG+TGG | - | chr4.3:22592281-22592300 | MS.gene33836:intron | 50.0% | |
| GAGAACAGAAGGTGGAGAAG+TGG | - | chr4.3:22591884-22591903 | MS.gene33836:CDS | 50.0% | |
| GCGAGTGGTGAAAGAGGAAT+TGG | - | chr4.3:22591752-22591771 | MS.gene33836:CDS | 50.0% | |
| GGTTTCAGGCACAAGCCTAA+TGG | + | chr4.3:22592779-22592798 | None:intergenic | 50.0% | |
| GTTATCAGGGAAGGCTTCCA+GGG | - | chr4.3:22593653-22593672 | MS.gene33836:CDS | 50.0% | |
| TCCAGGGGGAGAACAAATTG+CGG | - | chr4.3:22593669-22593688 | MS.gene33836:intron | 50.0% | |
| TGGAAGGAGAGAACAGAAGG+TGG | - | chr4.3:22591876-22591895 | MS.gene33836:CDS | 50.0% | |
| TGTTATCAGGGAAGGCTTCC+AGG | - | chr4.3:22593652-22593671 | MS.gene33836:CDS | 50.0% | |
| TTATCAGGGAAGGCTTCCAG+GGG | - | chr4.3:22593654-22593673 | MS.gene33836:CDS | 50.0% | |
| ! | GGGATTTGGTCCTGTCTACA+AGG | - | chr4.3:22593462-22593481 | MS.gene33836:CDS | 50.0% |
| ! | TGGGTGTATGGTTTGGCATG+GGG | - | chr4.3:22592457-22592476 | MS.gene33836:CDS | 50.0% |
| !! | ATCATCGAGGGCATTGCAAG+AGG | - | chr4.3:22594030-22594049 | MS.gene33836:CDS | 50.0% |
| AGGCACAAGCCTAATGGGAG+GGG | + | chr4.3:22592773-22592792 | None:intergenic | 55.0% | |
| ATTGGGTCTCCCCTCCCATT+AGG | - | chr4.3:22592761-22592780 | MS.gene33836:intron | 55.0% | |
| CAGGCACAAGCCTAATGGGA+GGG | + | chr4.3:22592774-22592793 | None:intergenic | 55.0% | |
| CCACTGCACCACGTACACAT+AGG | + | chr4.3:22594313-22594332 | None:intergenic | 55.0% | |
| CCTATGTGTACGTGGTGCAG+TGG | - | chr4.3:22594310-22594329 | MS.gene33836:CDS | 55.0% | |
| CTCGCCGGAACTTTCATACC+TGG | + | chr4.3:22591737-22591756 | None:intergenic | 55.0% | |
| GGTATGAAAGTTCCGGCGAG+TGG | - | chr4.3:22591737-22591756 | MS.gene33836:CDS | 55.0% | |
| TATCAGGGAAGGCTTCCAGG+GGG | - | chr4.3:22593655-22593674 | MS.gene33836:CDS | 55.0% | |
| TCAGGCACAAGCCTAATGGG+AGG | + | chr4.3:22592775-22592794 | None:intergenic | 55.0% | |
| ! | ACCGCAATTTGTTCTCCCCC+TGG | + | chr4.3:22593673-22593692 | None:intergenic | 55.0% |
| GTTCCGGCGAGTGGTGAAAG+AGG | - | chr4.3:22591746-22591765 | MS.gene33836:CDS | 60.0% | |
| ! | GTGGCGGGGCTTATCTGCCT+TGG | - | chr4.3:22593084-22593103 | MS.gene33836:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 22591486 | 22594444 | 22591486 | ID=MS.gene33836 |
| chr4.3 | mRNA | 22591486 | 22594444 | 22591486 | ID=MS.gene33836.t1;Parent=MS.gene33836 |
| chr4.3 | exon | 22593718 | 22594444 | 22593718 | ID=MS.gene33836.t1.exon1;Parent=MS.gene33836.t1 |
| chr4.3 | CDS | 22593718 | 22594444 | 22593718 | ID=cds.MS.gene33836.t1;Parent=MS.gene33836.t1 |
| chr4.3 | exon | 22593379 | 22593683 | 22593379 | ID=MS.gene33836.t1.exon2;Parent=MS.gene33836.t1 |
| chr4.3 | CDS | 22593379 | 22593683 | 22593379 | ID=cds.MS.gene33836.t1;Parent=MS.gene33836.t1 |
| chr4.3 | exon | 22592780 | 22592890 | 22592780 | ID=MS.gene33836.t1.exon3;Parent=MS.gene33836.t1 |
| chr4.3 | CDS | 22592780 | 22592890 | 22592780 | ID=cds.MS.gene33836.t1;Parent=MS.gene33836.t1 |
| chr4.3 | exon | 22592515 | 22592677 | 22592515 | ID=MS.gene33836.t1.exon4;Parent=MS.gene33836.t1 |
| chr4.3 | CDS | 22592515 | 22592677 | 22592515 | ID=cds.MS.gene33836.t1;Parent=MS.gene33836.t1 |
| chr4.3 | exon | 22592447 | 22592489 | 22592447 | ID=MS.gene33836.t1.exon5;Parent=MS.gene33836.t1 |
| chr4.3 | CDS | 22592447 | 22592489 | 22592447 | ID=cds.MS.gene33836.t1;Parent=MS.gene33836.t1 |
| chr4.3 | exon | 22592059 | 22592269 | 22592059 | ID=MS.gene33836.t1.exon6;Parent=MS.gene33836.t1 |
| chr4.3 | CDS | 22592059 | 22592269 | 22592059 | ID=cds.MS.gene33836.t1;Parent=MS.gene33836.t1 |
| chr4.3 | exon | 22591707 | 22591944 | 22591707 | ID=MS.gene33836.t1.exon7;Parent=MS.gene33836.t1 |
| chr4.3 | CDS | 22591707 | 22591944 | 22591707 | ID=cds.MS.gene33836.t1;Parent=MS.gene33836.t1 |
| chr4.3 | exon | 22591486 | 22591600 | 22591486 | ID=MS.gene33836.t1.exon8;Parent=MS.gene33836.t1 |
| chr4.3 | CDS | 22591486 | 22591600 | 22591486 | ID=cds.MS.gene33836.t1;Parent=MS.gene33836.t1 |
| Gene Sequence |
| Protein sequence |
