Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34070.t1 | XP_024641064.1 | 97.4 | 343 | 9 | 0 | 1 | 343 | 1 | 343 | 4.70E-195 | 690.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34070.t1 | Q54P70 | 28.7 | 195 | 116 | 5 | 165 | 341 | 575 | 764 | 7.2e-11 | 69.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34070.t1 | G7I502 | 97.4 | 343 | 9 | 0 | 1 | 343 | 1 | 343 | 3.4e-195 | 690.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene055898 | MS.gene34070 | PPI |
| MS.gene34070 | MS.gene029809 | PPI |
| MS.gene064483 | MS.gene34070 | PPI |
| MS.gene051473 | MS.gene34070 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34070.t1 | MTR_1g094650 | 97.376 | 343 | 9 | 0 | 1 | 343 | 1 | 343 | 0.0 | 698 |
| MS.gene34070.t1 | MTR_1g063900 | 49.853 | 339 | 137 | 6 | 10 | 343 | 8 | 318 | 1.45e-101 | 303 |
| MS.gene34070.t1 | MTR_6g033065 | 56.989 | 186 | 79 | 1 | 156 | 340 | 27 | 212 | 5.85e-75 | 231 |
| MS.gene34070.t1 | MTR_1g063900 | 46.048 | 291 | 124 | 6 | 10 | 295 | 8 | 270 | 3.48e-72 | 225 |
| MS.gene34070.t1 | MTR_3g081150 | 56.213 | 169 | 74 | 0 | 175 | 343 | 47 | 215 | 2.65e-68 | 214 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34070.t1 | AT5G04250 | 52.187 | 343 | 146 | 5 | 4 | 343 | 2 | 329 | 3.18e-110 | 325 |
| MS.gene34070.t1 | AT5G04250 | 52.187 | 343 | 146 | 5 | 4 | 343 | 2 | 329 | 3.18e-110 | 325 |
| MS.gene34070.t1 | AT5G03330 | 53.310 | 287 | 123 | 4 | 54 | 340 | 60 | 335 | 7.56e-89 | 271 |
| MS.gene34070.t1 | AT5G03330 | 53.310 | 287 | 123 | 4 | 54 | 340 | 60 | 335 | 7.56e-89 | 271 |
| MS.gene34070.t1 | AT5G03330 | 51.673 | 269 | 119 | 4 | 54 | 322 | 60 | 317 | 1.23e-76 | 239 |
| MS.gene34070.t1 | AT5G03330 | 51.673 | 269 | 119 | 4 | 54 | 322 | 60 | 317 | 1.23e-76 | 239 |
| MS.gene34070.t1 | AT3G02070 | 59.016 | 183 | 75 | 0 | 158 | 340 | 19 | 201 | 8.60e-76 | 233 |
| MS.gene34070.t1 | AT3G02070 | 59.016 | 183 | 75 | 0 | 158 | 340 | 19 | 201 | 8.60e-76 | 233 |
| MS.gene34070.t1 | AT3G22260 | 52.778 | 180 | 83 | 1 | 166 | 343 | 47 | 226 | 6.00e-64 | 203 |
| MS.gene34070.t1 | AT3G22260 | 52.778 | 180 | 83 | 1 | 166 | 343 | 47 | 226 | 1.01e-63 | 202 |
| MS.gene34070.t1 | AT3G22260 | 52.778 | 180 | 83 | 1 | 166 | 343 | 47 | 226 | 1.01e-63 | 202 |
| MS.gene34070.t1 | AT3G22260 | 52.778 | 180 | 83 | 1 | 166 | 343 | 47 | 226 | 1.01e-63 | 202 |
| MS.gene34070.t1 | AT3G22260 | 52.778 | 180 | 83 | 1 | 166 | 343 | 47 | 226 | 1.01e-63 | 202 |
| MS.gene34070.t1 | AT3G22260 | 52.778 | 180 | 83 | 1 | 166 | 343 | 47 | 226 | 1.01e-63 | 202 |
| MS.gene34070.t1 | AT2G39320 | 40.984 | 122 | 52 | 2 | 223 | 343 | 2 | 104 | 9.14e-24 | 97.1 |
Find 84 sgRNAs with CRISPR-Local
Find 367 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGTAATATTTCTGAGCTTT+TGG | 0.231658 | 1.2:+73732214 | MS.gene34070:intron |
| CTTGATTCCATGGAATCTTC+TGG | 0.245382 | 1.2:+73726939 | MS.gene34070:CDS |
| GAGCATGAAGTTGGAGTATT+TGG | 0.256310 | 1.2:+73727228 | MS.gene34070:CDS |
| CATGATGACATCACATGATA+TGG | 0.308680 | 1.2:+73726722 | None:intergenic |
| ATAGTCAAGTTCAATATGTT+AGG | 0.312757 | 1.2:+73726841 | MS.gene34070:CDS |
| ATATGAACTGATTGAGTCTA+AGG | 0.313550 | 1.2:+73729662 | MS.gene34070:CDS |
| GAGTATTTGGTTCGTCTTCT+AGG | 0.317804 | 1.2:+73727241 | MS.gene34070:CDS |
| ATGACTCATCTACGGGATTC+TGG | 0.332360 | 1.2:-73727155 | None:intergenic |
| ATAAATTTGTTACCTCCTTC+CGG | 0.346210 | 1.2:-73732264 | None:intergenic |
| CGTACAAATTTGTGGAGGTT+TGG | 0.367169 | 1.2:-73730624 | None:intergenic |
| ACCTGTCTAGCAGCCTTTGA+TGG | 0.372482 | 1.2:-73727835 | None:intergenic |
| GGGCGATCATGTCACGTTGC+AGG | 0.384197 | 1.2:+73730946 | MS.gene34070:CDS |
| CTATGCTGGTTATGTTCCTA+TGG | 0.389215 | 1.2:+73730778 | MS.gene34070:CDS |
| GAAGTTACACTTACAGGAAT+AGG | 0.398508 | 1.2:-73727369 | None:intergenic |
| ATTTGTGATTACATCTTTCA+AGG | 0.399824 | 1.2:+73731888 | MS.gene34070:CDS |
| AATCCTCCGCTTCTTTCATA+TGG | 0.401116 | 1.2:-73727179 | None:intergenic |
| TGATGAAATGTGGCGTTCAT+TGG | 0.411463 | 1.2:+73727287 | MS.gene34070:CDS |
| TTGATTCCATGGAATCTTCT+GGG | 0.418354 | 1.2:+73726940 | MS.gene34070:CDS |
| ACATAACCAGCATAGAGATC+TGG | 0.421382 | 1.2:-73730770 | None:intergenic |
| GTTGCAGGCTGCTGCAGATT+GGG | 0.423487 | 1.2:+73730961 | MS.gene34070:CDS |
| CGTTGCAGGCTGCTGCAGAT+TGG | 0.424955 | 1.2:+73730960 | MS.gene34070:CDS |
| ACCATCAAAGGCTGCTAGAC+AGG | 0.427425 | 1.2:+73727834 | MS.gene34070:CDS |
| TTTGGTTCGTCTTCTAGGTC+AGG | 0.429238 | 1.2:+73727246 | MS.gene34070:CDS |
| GTGGCGTTCATTGGAAATAT+CGG | 0.434139 | 1.2:+73727296 | MS.gene34070:CDS |
| GAAAATGATGAGCATGAAGT+TGG | 0.445523 | 1.2:+73727219 | MS.gene34070:CDS |
| TCGGACGAGTCTTCTCTTGA+TGG | 0.446395 | 1.2:+73727315 | MS.gene34070:CDS |
| ACGGGAACAAGTTGTTCAAC+AGG | 0.449520 | 1.2:+73730644 | MS.gene34070:CDS |
| TCAAACAGGAGCTATAACTT+TGG | 0.457569 | 1.2:+73727026 | MS.gene34070:CDS |
| GATCCCCTGGTGTCGTAACT+CGG | 0.467589 | 1.2:+73726805 | MS.gene34070:CDS |
| GGATCCTGACGTTGTTCGAT+GGG | 0.467870 | 1.2:+73726743 | MS.gene34070:CDS |
| GCATTACAACTCAATTTATC+CGG | 0.470926 | 1.2:+73732245 | MS.gene34070:CDS |
| ATTATCACATCTTGATTCCA+TGG | 0.475855 | 1.2:+73726929 | MS.gene34070:CDS |
| CTGATTGAGTCTAAGGTTGA+TGG | 0.477397 | 1.2:+73729669 | MS.gene34070:CDS |
| TGATCAAATCTCACTTCTTG+TGG | 0.477665 | 1.2:-73731950 | None:intergenic |
| AATATTTAAAGAAGATGAGC+AGG | 0.478327 | 1.2:+73730810 | MS.gene34070:CDS |
| AATTTGTTAGGAGTGGTGAA+TGG | 0.479280 | 1.2:+73730924 | MS.gene34070:intron |
| CACATTTCATCAGTAATGAT+AGG | 0.479848 | 1.2:-73727276 | None:intergenic |
| ACTGGCTATCTTCTTCAAAC+AGG | 0.480173 | 1.2:+73727012 | MS.gene34070:CDS |
| TAGTCAAGTTCAATATGTTA+GGG | 0.494117 | 1.2:+73726842 | MS.gene34070:CDS |
| TAGCCAGTCCTGTGCATCTA+CGG | 0.494897 | 1.2:-73726997 | None:intergenic |
| TGGATCCTGACGTTGTTCGA+TGG | 0.500356 | 1.2:+73726742 | MS.gene34070:CDS |
| AGGCCCCATCGAACAACGTC+AGG | 0.501197 | 1.2:-73726747 | None:intergenic |
| CTTGTTCCCGTACAAATTTG+TGG | 0.501678 | 1.2:-73730632 | None:intergenic |
| CATATGGTATGACTCATCTA+CGG | 0.505093 | 1.2:-73727163 | None:intergenic |
| TCTTCTCTTGATGGTGAAGT+AGG | 0.505900 | 1.2:+73727324 | MS.gene34070:CDS |
| TTTCCACATGGTCGATCCCC+TGG | 0.508416 | 1.2:+73726792 | MS.gene34070:CDS |
| ATATGGTATGACTCATCTAC+GGG | 0.510485 | 1.2:-73727162 | None:intergenic |
| TTACAGGAATAGGAACCATC+TGG | 0.510872 | 1.2:-73727359 | None:intergenic |
| CATAACCAGCATAGAGATCT+GGG | 0.512866 | 1.2:-73730769 | None:intergenic |
| AGGATTGTGGTCCAAGTGAA+AGG | 0.513940 | 1.2:+73727196 | MS.gene34070:CDS |
| CAAACCTCCACAAATTTGTA+CGG | 0.514664 | 1.2:+73730625 | MS.gene34070:CDS |
| ATTTGTTAGGAGTGGTGAAT+GGG | 0.523506 | 1.2:+73730925 | MS.gene34070:intron |
| CATCCGTAGATGCACAGGAC+TGG | 0.527233 | 1.2:+73726994 | MS.gene34070:CDS |
| CATCCTCCCAGAAGATTCCA+TGG | 0.533488 | 1.2:-73726946 | None:intergenic |
| AAGAAGTATCAGACCATCAA+AGG | 0.544120 | 1.2:+73727822 | MS.gene34070:CDS |
| TCCGACCCAGATCTCTATGC+TGG | 0.548139 | 1.2:+73730764 | MS.gene34070:CDS |
| GATACTTCTTCGTTCTCAGA+TGG | 0.551344 | 1.2:-73727809 | None:intergenic |
| AAATATTCACTATAAACCAT+AGG | 0.553433 | 1.2:-73730794 | None:intergenic |
| GCGAGCATCCGTAGATGCAC+AGG | 0.562509 | 1.2:+73726989 | MS.gene34070:CDS |
| CAAGTTCAATATGTTAGGGA+AGG | 0.564597 | 1.2:+73726846 | MS.gene34070:CDS |
| ATGAAAGAAGCGGAGGATTG+TGG | 0.568765 | 1.2:+73727183 | MS.gene34070:CDS |
| TGATGGAGATGGTAACTGTC+AGG | 0.570584 | 1.2:+73729686 | MS.gene34070:CDS |
| TACAACTCAATTTATCCGGA+AGG | 0.580859 | 1.2:+73732249 | MS.gene34070:CDS |
| GGATTGTGGTCCAAGTGAAA+GGG | 0.581256 | 1.2:+73727197 | MS.gene34070:CDS |
| GAGTCTAAGGTTGATGGAGA+TGG | 0.583074 | 1.2:+73729675 | MS.gene34070:CDS |
| AAACCTCCACAAATTTGTAC+GGG | 0.584066 | 1.2:+73730626 | MS.gene34070:CDS |
| AGGCAAAAGATTAAACCAGA+TGG | 0.599929 | 1.2:+73727344 | MS.gene34070:CDS |
| TCACACCGAGTTACGACACC+AGG | 0.603061 | 1.2:-73726810 | None:intergenic |
| AACTCAATTTATCCGGAAGG+AGG | 0.611887 | 1.2:+73732252 | MS.gene34070:CDS |
| TGCAAACATCTAGAAGATGT+AGG | 0.621131 | 1.2:-73726767 | None:intergenic |
| CTTGTGGACTTCTGTATCTG+CGG | 0.625166 | 1.2:-73731934 | None:intergenic |
| TTTGTTAGGAGTGGTGAATG+GGG | 0.625472 | 1.2:+73730926 | MS.gene34070:intron |
| GTCATACCATATGAAAGAAG+CGG | 0.641922 | 1.2:+73727173 | MS.gene34070:CDS |
| ACCAGCATAGAGATCTGGGT+CGG | 0.658906 | 1.2:-73730765 | None:intergenic |
| ATACCATATGAAAGAAGCGG+AGG | 0.659464 | 1.2:+73727176 | MS.gene34070:CDS |
| TTCAAATGTTGAACATGACG+AGG | 0.665749 | 1.2:+73726881 | MS.gene34070:CDS |
| GATGTTTGCACATTTCCACA+TGG | 0.675781 | 1.2:+73726780 | MS.gene34070:CDS |
| GTTCCCGTACAAATTTGTGG+AGG | 0.677176 | 1.2:-73730629 | None:intergenic |
| ACACCAGGGGATCGACCATG+TGG | 0.680011 | 1.2:-73726795 | None:intergenic |
| GATCCTGACGTTGTTCGATG+GGG | 0.691921 | 1.2:+73726744 | MS.gene34070:CDS |
| CTATCATTACTGATGAAATG+TGG | 0.702769 | 1.2:+73727277 | MS.gene34070:CDS |
| ATTCCATGGAATCTTCTGGG+AGG | 0.705324 | 1.2:+73726943 | MS.gene34070:CDS |
| CACACCGAGTTACGACACCA+GGG | 0.709258 | 1.2:-73726809 | None:intergenic |
| ACACCGAGTTACGACACCAG+GGG | 0.746885 | 1.2:-73726808 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAACCAAA+TGG | - | chr1.2:73727971-73727990 | None:intergenic | 10.0% |
| !! | AAAAAATATAATAAAAGCTT+CGG | + | chr1.2:73728811-73728830 | MS.gene34070:intron | 10.0% |
| !! | AAAAATTATTTGTCTTTAAA+TGG | + | chr1.2:73731628-73731647 | MS.gene34070:intron | 10.0% |
| !! | AAAACATTCATAAATTTATT+GGG | + | chr1.2:73729786-73729805 | MS.gene34070:intron | 10.0% |
| !! | ACTACTAATTAATAATTATT+TGG | - | chr1.2:73728917-73728936 | None:intergenic | 10.0% |
| !! | ATTAATTAAAATTGATGTAT+AGG | - | chr1.2:73731120-73731139 | None:intergenic | 10.0% |
| !! | TAAAACATTCATAAATTTAT+TGG | + | chr1.2:73729785-73729804 | MS.gene34070:intron | 10.0% |
| !! | TAAATTCTTTAATTATGTAA+AGG | + | chr1.2:73731705-73731724 | MS.gene34070:intron | 10.0% |
| !! | TAATAATTATTTGGTATAAT+AGG | - | chr1.2:73728908-73728927 | None:intergenic | 10.0% |
| !! | TGAAATAAATATTATAATAC+TGG | - | chr1.2:73729758-73729777 | None:intergenic | 10.0% |
| !! | TTATTAATTAGTAGTTATAT+TGG | + | chr1.2:73728922-73728941 | MS.gene34070:intron | 10.0% |
| !!! | AAGTTATTTATAAGTTATTT+TGG | + | chr1.2:73727069-73727088 | MS.gene34070:intron | 10.0% |
| !!! | ATCAATTTTAATTAATCAAA+TGG | + | chr1.2:73731124-73731143 | MS.gene34070:intron | 10.0% |
| !! | ATGAAAAAGATTTAATAAGA+TGG | + | chr1.2:73729486-73729505 | MS.gene34070:intron | 15.0% |
| !! | ATTGGTATTATAATCTTTAT+TGG | + | chr1.2:73731602-73731621 | MS.gene34070:intron | 15.0% |
| !! | GAAGCAAAAAAAAAAAAAAA+AGG | - | chr1.2:73727526-73727545 | None:intergenic | 15.0% |
| !! | GTAGAAAAAAATATAAAAAG+AGG | - | chr1.2:73729538-73729557 | None:intergenic | 15.0% |
| !! | TTAATTATGTAAAGGAATTA+AGG | + | chr1.2:73731713-73731732 | MS.gene34070:intron | 15.0% |
| !!! | AATTTATGAATGTTTTAACA+AGG | - | chr1.2:73729782-73729801 | None:intergenic | 15.0% |
| !!! | ATTATATTTTTTACGAAAAC+AGG | - | chr1.2:73728803-73728822 | None:intergenic | 15.0% |
| !!! | ATTTTATTTTTTATGTCTGT+TGG | + | chr1.2:73727866-73727885 | MS.gene34070:intron | 15.0% |
| !!! | ATTTTTTAGCATTATTAACT+TGG | + | chr1.2:73730488-73730507 | MS.gene34070:intron | 15.0% |
| !!! | CAAATTCATAATTTTCTTAA+AGG | - | chr1.2:73728076-73728095 | None:intergenic | 15.0% |
| !!! | GATTTCTATATATATTGTTT+TGG | - | chr1.2:73729291-73729310 | None:intergenic | 15.0% |
| !!! | TAATTGTTATTAGGAAAATT+GGG | - | chr1.2:73731356-73731375 | None:intergenic | 15.0% |
| !!! | TTAATTGTTATTAGGAAAAT+TGG | - | chr1.2:73731357-73731376 | None:intergenic | 15.0% |
| !!! | TTCTATCATAAACTAAATTT+TGG | - | chr1.2:73731219-73731238 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTTTGCTTC+TGG | + | chr1.2:73727526-73727545 | MS.gene34070:intron | 15.0% |
| !! | AAAAAAAAAAACATGTTTGC+TGG | - | chr1.2:73728842-73728861 | None:intergenic | 20.0% |
| !! | AAAAAAAAAACATGTTTGCT+GGG | - | chr1.2:73728841-73728860 | None:intergenic | 20.0% |
| !! | AAAAAAAAGCAACAAAGAAA+AGG | + | chr1.2:73728268-73728287 | MS.gene34070:intron | 20.0% |
| !! | AAATATTCACTATAAACCAT+AGG | - | chr1.2:73730797-73730816 | None:intergenic | 20.0% |
| !! | AAGTTATTGAGAAACTAATT+TGG | - | chr1.2:73728553-73728572 | None:intergenic | 20.0% |
| !! | ATATCATAGGTTTAAATGAT+TGG | + | chr1.2:73731584-73731603 | MS.gene34070:intron | 20.0% |
| !! | ATTAAGAAACTAACTCATTA+AGG | - | chr1.2:73728580-73728599 | None:intergenic | 20.0% |
| !! | CACTCAAATTAAAATTTGAT+AGG | - | chr1.2:73732104-73732123 | None:intergenic | 20.0% |
| !! | GAATCAATACATATGATTAA+AGG | - | chr1.2:73730714-73730733 | None:intergenic | 20.0% |
| !! | GTATTTAATTAACTTCTTCT+AGG | - | chr1.2:73727904-73727923 | None:intergenic | 20.0% |
| !! | TCATAACATTTGTAGAAAAA+AGG | - | chr1.2:73730305-73730324 | None:intergenic | 20.0% |
| !! | TGTTATGAATCTTATGATAT+AGG | + | chr1.2:73730317-73730336 | MS.gene34070:intron | 20.0% |
| !! | TTAAACCATTTGAACTATTT+GGG | - | chr1.2:73731538-73731557 | None:intergenic | 20.0% |
| !! | TTTAAACCTATGATATATCA+AGG | - | chr1.2:73731580-73731599 | None:intergenic | 20.0% |
| !! | TTTAATCCTTGATATATCAT+AGG | + | chr1.2:73731571-73731590 | MS.gene34070:intron | 20.0% |
| !!! | AATTGTTATTAGGAAAATTG+GGG | - | chr1.2:73731355-73731374 | None:intergenic | 20.0% |
| !!! | ATCAAATTTTAATTTGAGTG+TGG | + | chr1.2:73732104-73732123 | MS.gene34070:intron | 20.0% |
| !!! | GTATGTTTTTGTTGATTTTA+GGG | - | chr1.2:73727790-73727809 | None:intergenic | 20.0% |
| !!! | GTATTATAGTTATTTTAGAG+AGG | + | chr1.2:73728102-73728121 | MS.gene34070:intron | 20.0% |
| !!! | TGGTCAACTTATATATTTTT+TGG | - | chr1.2:73730191-73730210 | None:intergenic | 20.0% |
| ! | AAAGAGATCATCTTATTAGT+TGG | - | chr1.2:73729363-73729382 | None:intergenic | 25.0% |
| ! | AAATGAAAACTGTACTAGAT+AGG | - | chr1.2:73728420-73728439 | None:intergenic | 25.0% |
| ! | AAGAGATCATCTTATTAGTT+GGG | - | chr1.2:73729362-73729381 | None:intergenic | 25.0% |
| ! | AATATTTAAAGAAGATGAGC+AGG | + | chr1.2:73730810-73730829 | MS.gene34070:CDS | 25.0% |
| ! | ACAAAATATTGTCTGTTACA+AGG | - | chr1.2:73727996-73728015 | None:intergenic | 25.0% |
| ! | ACACCTAAAAACAACTATAT+TGG | - | chr1.2:73729034-73729053 | None:intergenic | 25.0% |
| ! | AGTACATGTAAATGTGAATA+TGG | + | chr1.2:73732013-73732032 | MS.gene34070:intron | 25.0% |
| ! | AGTTTATGATAGAACATCAT+TGG | + | chr1.2:73731225-73731244 | MS.gene34070:intron | 25.0% |
| ! | ATAAGTAAATATCATGTCAC+CGG | - | chr1.2:73731676-73731695 | None:intergenic | 25.0% |
| ! | ATAGTCAAGTTCAATATGTT+AGG | + | chr1.2:73726841-73726860 | MS.gene34070:CDS | 25.0% |
| ! | ATATTGGTGTATCACTATAT+TGG | - | chr1.2:73729018-73729037 | None:intergenic | 25.0% |
| ! | ATTTACTTGAATGACTGATA+TGG | + | chr1.2:73731830-73731849 | MS.gene34070:intron | 25.0% |
| ! | ATTTGTGATTACATCTTTCA+AGG | + | chr1.2:73731888-73731907 | MS.gene34070:CDS | 25.0% |
| ! | CTTAAACCATTTGAACTATT+TGG | - | chr1.2:73731539-73731558 | None:intergenic | 25.0% |
| ! | GTGATATATAATCAACATGT+AGG | + | chr1.2:73727120-73727139 | MS.gene34070:intron | 25.0% |
| ! | TAAAATTGATGTATAGGAGT+TGG | - | chr1.2:73731114-73731133 | None:intergenic | 25.0% |
| ! | TACGTATGAATTTCTGAATT+TGG | + | chr1.2:73729153-73729172 | MS.gene34070:intron | 25.0% |
| ! | TAGACCTTGAAAAACTATAA+GGG | + | chr1.2:73731155-73731174 | MS.gene34070:intron | 25.0% |
| ! | TAGTCAAGTTCAATATGTTA+GGG | + | chr1.2:73726842-73726861 | MS.gene34070:CDS | 25.0% |
| ! | TATGAATTTCTGAATTTGGT+AGG | + | chr1.2:73729157-73729176 | MS.gene34070:intron | 25.0% |
| ! | TATTGGTGTATCACTATATT+GGG | - | chr1.2:73729017-73729036 | None:intergenic | 25.0% |
| ! | TCTCAAAGAGAAGTTAAAAT+GGG | + | chr1.2:73728217-73728236 | MS.gene34070:intron | 25.0% |
| ! | TTAAAATAAACTCTGACACT+TGG | - | chr1.2:73731089-73731108 | None:intergenic | 25.0% |
| ! | TTAGACCTTGAAAAACTATA+AGG | + | chr1.2:73731154-73731173 | MS.gene34070:intron | 25.0% |
| ! | TTATCAGAAGTAAATCCTTT+GGG | + | chr1.2:73730251-73730270 | MS.gene34070:intron | 25.0% |
| ! | TTATGTTTCTTATGCCAATA+TGG | + | chr1.2:73730858-73730877 | MS.gene34070:intron | 25.0% |
| ! | TTCTCAAAGAGAAGTTAAAA+TGG | + | chr1.2:73728216-73728235 | MS.gene34070:intron | 25.0% |
| ! | TTTATCAGAAGTAAATCCTT+TGG | + | chr1.2:73730250-73730269 | MS.gene34070:intron | 25.0% |
| !! | AAAAAAAAACATGTTTGCTG+GGG | - | chr1.2:73728840-73728859 | None:intergenic | 25.0% |
| !! | AAATATATAAGTTGACCACA+TGG | + | chr1.2:73730193-73730212 | MS.gene34070:intron | 25.0% |
| !! | AATAATAAAGAGTGACTTGT+TGG | + | chr1.2:73730552-73730571 | MS.gene34070:intron | 25.0% |
| !! | ACTAATAAGATGATCTCTTT+TGG | + | chr1.2:73729363-73729382 | MS.gene34070:intron | 25.0% |
| !! | ATGTTATAACTTGTGAAAGT+AGG | + | chr1.2:73729829-73729848 | MS.gene34070:intron | 25.0% |
| !! | ATTTGGGACAATTAACTATT+TGG | - | chr1.2:73731522-73731541 | None:intergenic | 25.0% |
| !! | GAGTTAGTTTCTTAATTACT+TGG | + | chr1.2:73728584-73728603 | MS.gene34070:intron | 25.0% |
| !! | GCTTTATGTATGAATTTGTT+AGG | + | chr1.2:73730912-73730931 | MS.gene34070:intron | 25.0% |
| !! | TCATAATTTTCTTAAACGAG+AGG | - | chr1.2:73728071-73728090 | None:intergenic | 25.0% |
| !! | TCATAATTTTCTTAAAGGAG+AGG | - | chr1.2:73728159-73728178 | None:intergenic | 25.0% |
| !!! | AAGTTATTTTGGTATGTAAG+AGG | + | chr1.2:73727080-73727099 | MS.gene34070:intron | 25.0% |
| !!! | ACACCAATATAGTTGTTTTT+AGG | + | chr1.2:73729028-73729047 | MS.gene34070:intron | 25.0% |
| !!! | ACTGCGTTTTAATTGTTATT+AGG | - | chr1.2:73731365-73731384 | None:intergenic | 25.0% |
| !!! | AGTAATATTTCTGAGCTTTT+GGG | + | chr1.2:73732215-73732234 | MS.gene34070:intron | 25.0% |
| !!! | AGTTTTTCAAGGTCTAAATA+TGG | - | chr1.2:73731151-73731170 | None:intergenic | 25.0% |
| !!! | GGTATGTTTTTGTTGATTTT+AGG | - | chr1.2:73727791-73727810 | None:intergenic | 25.0% |
| !!! | TTTTTATCTAGAGAAGTGTA+GGG | + | chr1.2:73728476-73728495 | MS.gene34070:intron | 25.0% |
| !!! | TTTTTTATCTAGAGAAGTGT+AGG | + | chr1.2:73728475-73728494 | MS.gene34070:intron | 25.0% |
| !!! | TTTTTTTTCTTTTCAAGCTG+TGG | - | chr1.2:73728255-73728274 | None:intergenic | 25.0% |
| AAAGCTATCAGCAAAACATA+AGG | - | chr1.2:73730897-73730916 | None:intergenic | 30.0% | |
| AAAGTAGGATTAAGAATGAG+GGG | + | chr1.2:73729844-73729863 | MS.gene34070:intron | 30.0% | |
| AACTATAAGGGGAAACTATT+AGG | + | chr1.2:73731167-73731186 | MS.gene34070:intron | 30.0% | |
| AACTTCTAAATACACCCATT+CGG | + | chr1.2:73728983-73729002 | MS.gene34070:intron | 30.0% | |
| AATCATCTCTAGTATGTGAA+AGG | - | chr1.2:73728325-73728344 | None:intergenic | 30.0% | |
| AATGAAAACTGTACTAGAGA+AGG | - | chr1.2:73728455-73728474 | None:intergenic | 30.0% | |
| AATGGGAATGAATATGCTAT+TGG | - | chr1.2:73730006-73730025 | None:intergenic | 30.0% | |
| AATTATTGCTTAGTCGTGTA+TGG | - | chr1.2:73728957-73728976 | None:intergenic | 30.0% | |
| AATTTGTGCCTTTCATTAGA+AGG | + | chr1.2:73728504-73728523 | MS.gene34070:intron | 30.0% | |
| ACTGCATAAATCACATGTAA+AGG | - | chr1.2:73732198-73732217 | None:intergenic | 30.0% | |
| AGACCTTGAAAAACTATAAG+GGG | + | chr1.2:73731156-73731175 | MS.gene34070:intron | 30.0% | |
| ATATGAACTGATTGAGTCTA+AGG | + | chr1.2:73729662-73729681 | MS.gene34070:CDS | 30.0% | |
| ATCAGTCATTCAAGTAAATG+AGG | - | chr1.2:73731829-73731848 | None:intergenic | 30.0% | |
| ATTATCACATCTTGATTCCA+TGG | + | chr1.2:73726929-73726948 | MS.gene34070:CDS | 30.0% | |
| ATTATTGCTTAGTCGTGTAT+GGG | - | chr1.2:73728956-73728975 | None:intergenic | 30.0% | |
| ATTGTCCCAAATAGTTCAAA+TGG | + | chr1.2:73731530-73731549 | MS.gene34070:intron | 30.0% | |
| ATTTACATTGTTGTCTCTCT+TGG | - | chr1.2:73730096-73730115 | None:intergenic | 30.0% | |
| CACATTTCATCAGTAATGAT+AGG | - | chr1.2:73727279-73727298 | None:intergenic | 30.0% | |
| CTATCATTACTGATGAAATG+TGG | + | chr1.2:73727277-73727296 | MS.gene34070:CDS | 30.0% | |
| CTCAAAGAGAAGTTAAAATG+GGG | + | chr1.2:73728218-73728237 | MS.gene34070:intron | 30.0% | |
| CTGCATAAATCACATGTAAA+GGG | - | chr1.2:73732197-73732216 | None:intergenic | 30.0% | |
| CTTCTTGACTTAGTTTCTAA+AGG | + | chr1.2:73729247-73729266 | MS.gene34070:intron | 30.0% | |
| GAAAGTAGGATTAAGAATGA+GGG | + | chr1.2:73729843-73729862 | MS.gene34070:intron | 30.0% | |
| GACTTTCAATAAAGCCATAT+TGG | - | chr1.2:73730875-73730894 | None:intergenic | 30.0% | |
| GATTGTTCCCTTAAATCTTT+GGG | + | chr1.2:73728341-73728360 | MS.gene34070:intron | 30.0% | |
| GCATTACAACTCAATTTATC+CGG | + | chr1.2:73732245-73732264 | MS.gene34070:CDS | 30.0% | |
| TAAATGGAACTGCTGTAAAA+AGG | + | chr1.2:73731644-73731663 | MS.gene34070:intron | 30.0% | |
| TAACTTTGGTACTAGAAACT+TGG | + | chr1.2:73727040-73727059 | MS.gene34070:intron | 30.0% | |
| TAGTTAGTTACTTGAATCGT+GGG | + | chr1.2:73727577-73727596 | MS.gene34070:intron | 30.0% | |
| TATCAGAAGTAAATCCTTTG+GGG | + | chr1.2:73730252-73730271 | MS.gene34070:intron | 30.0% | |
| TATGCTATTAATGAACCATG+TGG | - | chr1.2:73730211-73730230 | None:intergenic | 30.0% | |
| TGAAAGTAGGATTAAGAATG+AGG | + | chr1.2:73729842-73729861 | MS.gene34070:intron | 30.0% | |
| TGATTGTTCCCTTAAATCTT+TGG | + | chr1.2:73728340-73728359 | MS.gene34070:intron | 30.0% | |
| TGTAATTTGATCCATGTAGA+GGG | + | chr1.2:73731248-73731267 | MS.gene34070:intron | 30.0% | |
| TGTACTAGATAGGATATAAG+AGG | - | chr1.2:73728410-73728429 | None:intergenic | 30.0% | |
| TTCAAAAAGAATCCAGTCAA+AGG | - | chr1.2:73729437-73729456 | None:intergenic | 30.0% | |
| ! | ATATATGTCTGAAGTCTTCA+CGG | - | chr1.2:73729970-73729989 | None:intergenic | 30.0% |
| ! | GATGATTTTGCATAGAATTC+AGG | + | chr1.2:73727423-73727442 | MS.gene34070:intron | 30.0% |
| ! | TTTCCCCTTATAGTTTTTCA+AGG | - | chr1.2:73731162-73731181 | None:intergenic | 30.0% |
| !! | ATGGAGAAGTCTTTTTAAAG+TGG | - | chr1.2:73727931-73727950 | None:intergenic | 30.0% |
| !! | ATGTATGAATTTGTTAGGAG+TGG | + | chr1.2:73730917-73730936 | MS.gene34070:intron | 30.0% |
| !! | CAATGATGTTTTTACCTGTT+TGG | + | chr1.2:73730680-73730699 | MS.gene34070:intron | 30.0% |
| !! | CAGTAATATTTCTGAGCTTT+TGG | + | chr1.2:73732214-73732233 | MS.gene34070:intron | 30.0% |
| !! | TTTTATCTAGAGAAGTGTAG+GGG | + | chr1.2:73728477-73728496 | MS.gene34070:intron | 30.0% |
| !!! | ACTTAGCATTTTTCTGAAAC+AGG | - | chr1.2:73732169-73732188 | None:intergenic | 30.0% |
| AAACCTCCACAAATTTGTAC+GGG | + | chr1.2:73730626-73730645 | MS.gene34070:CDS | 35.0% | |
| AAAGAAGAGACATGAAGAAG+TGG | - | chr1.2:73727402-73727421 | None:intergenic | 35.0% | |
| AAGTTGTTCAACAGGTTTGT+TGG | + | chr1.2:73730652-73730671 | MS.gene34070:intron | 35.0% | |
| AATCTTCTCTATCCTTTGAC+TGG | + | chr1.2:73729422-73729441 | MS.gene34070:intron | 35.0% | |
| ACGCAGTCTTCAAAAAGAAT+TGG | + | chr1.2:73731378-73731397 | MS.gene34070:intron | 35.0% | |
| ACTTCTAAATACACCCATTC+GGG | + | chr1.2:73728984-73729003 | MS.gene34070:intron | 35.0% | |
| ACTTCTTCATGTCTCTTCTT+TGG | + | chr1.2:73727401-73727420 | MS.gene34070:intron | 35.0% | |
| AGGATAAACTGAGTATTCTG+TGG | + | chr1.2:73731733-73731752 | MS.gene34070:intron | 35.0% | |
| AGGCAAAAGATTAAACCAGA+TGG | + | chr1.2:73727344-73727363 | MS.gene34070:CDS | 35.0% | |
| ATATGGTATGACTCATCTAC+GGG | - | chr1.2:73727165-73727184 | None:intergenic | 35.0% | |
| CAAACCTCCACAAATTTGTA+CGG | + | chr1.2:73730625-73730644 | MS.gene34070:CDS | 35.0% | |
| CAAGTTCAATATGTTAGGGA+AGG | + | chr1.2:73726846-73726865 | MS.gene34070:CDS | 35.0% | |
| CAATATTCTTCGACAGGAAT+GGG | - | chr1.2:73730023-73730042 | None:intergenic | 35.0% | |
| CACGATTCAAGTAACTAACT+AGG | - | chr1.2:73727578-73727597 | None:intergenic | 35.0% | |
| CATATGGTATGACTCATCTA+CGG | - | chr1.2:73727166-73727185 | None:intergenic | 35.0% | |
| CTAGTTAGTTACTTGAATCG+TGG | + | chr1.2:73727576-73727595 | MS.gene34070:intron | 35.0% | |
| CTTAAAGGAGAGGATATGAA+AGG | - | chr1.2:73728149-73728168 | None:intergenic | 35.0% | |
| CTTCTGATAAACTCTCAGTA+TGG | - | chr1.2:73730241-73730260 | None:intergenic | 35.0% | |
| GAAAATGATGAGCATGAAGT+TGG | + | chr1.2:73727219-73727238 | MS.gene34070:CDS | 35.0% | |
| GAAATGCAATATTCTTCGAC+AGG | - | chr1.2:73730029-73730048 | None:intergenic | 35.0% | |
| GAAGATTACAATGACTTCCT+AGG | - | chr1.2:73729409-73729428 | None:intergenic | 35.0% | |
| GAAGTTACACTTACAGGAAT+AGG | - | chr1.2:73727372-73727391 | None:intergenic | 35.0% | |
| GAATCATAAAGAGCCAGATT+GGG | + | chr1.2:73729454-73729473 | MS.gene34070:intron | 35.0% | |
| GAGGAATAAACAAAACGCAA+TGG | - | chr1.2:73731810-73731829 | None:intergenic | 35.0% | |
| GGAAACTATTAGGAAAGACT+TGG | + | chr1.2:73731177-73731196 | MS.gene34070:intron | 35.0% | |
| GGATAAACTGAGTATTCTGT+GGG | + | chr1.2:73731734-73731753 | MS.gene34070:intron | 35.0% | |
| GGATATAAATGTAGCAACCA+GGG | + | chr1.2:73727547-73727566 | MS.gene34070:intron | 35.0% | |
| GGTTCTACCCAAAGATTTAA+GGG | - | chr1.2:73728351-73728370 | None:intergenic | 35.0% | |
| GTCATACCATATGAAAGAAG+CGG | + | chr1.2:73727173-73727192 | MS.gene34070:CDS | 35.0% | |
| GTGTAATTTGATCCATGTAG+AGG | + | chr1.2:73731247-73731266 | MS.gene34070:intron | 35.0% | |
| TAACTAACTAGGAATTACCC+TGG | - | chr1.2:73727567-73727586 | None:intergenic | 35.0% | |
| TACAACTCAATTTATCCGGA+AGG | + | chr1.2:73732249-73732268 | MS.gene34070:CDS | 35.0% | |
| TATAAGAGGATATGAGCACT+AGG | - | chr1.2:73728396-73728415 | None:intergenic | 35.0% | |
| TCAAACAGGAGCTATAACTT+TGG | + | chr1.2:73727026-73727045 | MS.gene34070:CDS | 35.0% | |
| TGAACTGAAGTTACACTTAC+AGG | - | chr1.2:73727378-73727397 | None:intergenic | 35.0% | |
| TGAATCATAAAGAGCCAGAT+TGG | + | chr1.2:73729453-73729472 | MS.gene34070:intron | 35.0% | |
| TGATCAAATCTCACTTCTTG+TGG | - | chr1.2:73731953-73731972 | None:intergenic | 35.0% | |
| TGCAAACATCTAGAAGATGT+AGG | - | chr1.2:73726770-73726789 | None:intergenic | 35.0% | |
| TGGATATAAATGTAGCAACC+AGG | + | chr1.2:73727546-73727565 | MS.gene34070:intron | 35.0% | |
| TGTGGAGAAAAATTCCAAAC+TGG | + | chr1.2:73729936-73729955 | MS.gene34070:intron | 35.0% | |
| TGTGTGTGTGATATGATCAA+CGG | + | chr1.2:73731060-73731079 | MS.gene34070:intron | 35.0% | |
| TTCAAATGTTGAACATGACG+AGG | + | chr1.2:73726881-73726900 | MS.gene34070:CDS | 35.0% | |
| TTGATTCCATGGAATCTTCT+GGG | + | chr1.2:73726940-73726959 | MS.gene34070:CDS | 35.0% | |
| TTTCTCATGTCCTTTCAGTA+TGG | + | chr1.2:73731856-73731875 | MS.gene34070:intron | 35.0% | |
| ! | AGTAATTTGTCCTCTCTTCT+TGG | - | chr1.2:73728027-73728046 | None:intergenic | 35.0% |
| ! | ATTTGTTAGGAGTGGTGAAT+GGG | + | chr1.2:73730925-73730944 | MS.gene34070:intron | 35.0% |
| ! | CTCTTTTCACTATGAACAGA+AGG | + | chr1.2:73730154-73730173 | MS.gene34070:intron | 35.0% |
| ! | TATATGTCTGAAGTCTTCAC+GGG | - | chr1.2:73729969-73729988 | None:intergenic | 35.0% |
| ! | TCATCATTTTCCCTTTCACT+TGG | - | chr1.2:73727210-73727229 | None:intergenic | 35.0% |
| ! | TGGTTCTACCCAAAGATTTA+AGG | - | chr1.2:73728352-73728371 | None:intergenic | 35.0% |
| !! | AAGAAGTATCAGACCATCAA+AGG | + | chr1.2:73727822-73727841 | MS.gene34070:CDS | 35.0% |
| !! | AATTTGTTAGGAGTGGTGAA+TGG | + | chr1.2:73730924-73730943 | MS.gene34070:intron | 35.0% |
| !! | AGCATTATTAACTTGGTGTG+TGG | + | chr1.2:73730495-73730514 | MS.gene34070:intron | 35.0% |
| !! | AGTTTGGAATTTTTCTCCAC+AGG | - | chr1.2:73729937-73729956 | None:intergenic | 35.0% |
| !! | GCATTATTAACTTGGTGTGT+GGG | + | chr1.2:73730496-73730515 | MS.gene34070:intron | 35.0% |
| !! | TGATGTTTTTACCTGTTTGG+TGG | + | chr1.2:73730683-73730702 | MS.gene34070:intron | 35.0% |
| !!! | AACCAAATGGCTGTGTTTTT+TGG | - | chr1.2:73727958-73727977 | None:intergenic | 35.0% |
| !!! | ACCAAATGGCTGTGTTTTTT+GGG | - | chr1.2:73727957-73727976 | None:intergenic | 35.0% |
| !!! | TATTGTTTTGGCAGCTAGTA+TGG | - | chr1.2:73729279-73729298 | None:intergenic | 35.0% |
| !!! | TATTTTGACGCCATACTGAA+AGG | - | chr1.2:73731869-73731888 | None:intergenic | 35.0% |
| AAAAAAGGATGTGTTCCTGC+AGG | - | chr1.2:73727511-73727530 | None:intergenic | 40.0% | |
| AAACTGAGTATTCTGTGGGT+GGG | + | chr1.2:73731738-73731757 | MS.gene34070:intron | 40.0% | |
| AAGAAGACACCAAGCAAGAT+CGG | - | chr1.2:73729233-73729252 | None:intergenic | 40.0% | |
| AAGCTCCTGTTTATTGCACA+GGG | - | chr1.2:73727643-73727662 | None:intergenic | 40.0% | |
| AATCCTCCGCTTCTTTCATA+TGG | - | chr1.2:73727182-73727201 | None:intergenic | 40.0% | |
| ACATAACCAGCATAGAGATC+TGG | - | chr1.2:73730773-73730792 | None:intergenic | 40.0% | |
| ACCTAGACGTTAATTACCTG+TGG | + | chr1.2:73729918-73729937 | MS.gene34070:intron | 40.0% | |
| ACTGGCTATCTTCTTCAAAC+AGG | + | chr1.2:73727012-73727031 | MS.gene34070:CDS | 40.0% | |
| AGACTTGGAGATCAATGAGT+TGG | + | chr1.2:73731192-73731211 | MS.gene34070:intron | 40.0% | |
| ATACCATATGAAAGAAGCGG+AGG | + | chr1.2:73727176-73727195 | MS.gene34070:CDS | 40.0% | |
| ATTAACGTCTAGGTGAAGGT+AGG | - | chr1.2:73729912-73729931 | None:intergenic | 40.0% | |
| CATAACCAGCATAGAGATCT+GGG | - | chr1.2:73730772-73730791 | None:intergenic | 40.0% | |
| CGTACAAATTTGTGGAGGTT+TGG | - | chr1.2:73730627-73730646 | None:intergenic | 40.0% | |
| CTATACCCTGTGCAATAAAC+AGG | + | chr1.2:73727635-73727654 | MS.gene34070:intron | 40.0% | |
| CTTGATTCCATGGAATCTTC+TGG | + | chr1.2:73726939-73726958 | MS.gene34070:CDS | 40.0% | |
| CTTGTTCCCGTACAAATTTG+TGG | - | chr1.2:73730635-73730654 | None:intergenic | 40.0% | |
| GAAGTTAAAATGGGGAGACA+AGG | + | chr1.2:73728226-73728245 | MS.gene34070:intron | 40.0% | |
| GAATCGGAAATTGTTGGGAA+CGG | + | chr1.2:73728694-73728713 | MS.gene34070:intron | 40.0% | |
| GAGAGGACAAATTACTGCAA+AGG | + | chr1.2:73728031-73728050 | MS.gene34070:intron | 40.0% | |
| GATACTTCTTCGTTCTCAGA+TGG | - | chr1.2:73727812-73727831 | None:intergenic | 40.0% | |
| GATGTTTGCACATTTCCACA+TGG | + | chr1.2:73726780-73726799 | MS.gene34070:CDS | 40.0% | |
| GCAATATTCTTCGACAGGAA+TGG | - | chr1.2:73730024-73730043 | None:intergenic | 40.0% | |
| GCATGAGACCTTCTAATGAA+AGG | - | chr1.2:73728515-73728534 | None:intergenic | 40.0% | |
| GGGTGTTTAATATAGCTGTG+AGG | - | chr1.2:73729891-73729910 | None:intergenic | 40.0% | |
| GGTAATTAACGTCTAGGTGA+AGG | - | chr1.2:73729916-73729935 | None:intergenic | 40.0% | |
| GGTGTATCACTATATTGGGA+AGG | - | chr1.2:73729013-73729032 | None:intergenic | 40.0% | |
| GTATGTGAAAGGAATTGAGC+AGG | - | chr1.2:73728314-73728333 | None:intergenic | 40.0% | |
| GTCCAGAATCGGAAATTGTT+GGG | + | chr1.2:73728689-73728708 | MS.gene34070:intron | 40.0% | |
| GTGGCGTTCATTGGAAATAT+CGG | + | chr1.2:73727296-73727315 | MS.gene34070:CDS | 40.0% | |
| GTTACCATAACCAAGAAGAG+AGG | + | chr1.2:73728014-73728033 | MS.gene34070:intron | 40.0% | |
| TAAACTGAGTATTCTGTGGG+TGG | + | chr1.2:73731737-73731756 | MS.gene34070:intron | 40.0% | |
| TACAATGACTTCCTAGGTCA+AGG | - | chr1.2:73729403-73729422 | None:intergenic | 40.0% | |
| TCCACAGGTAATTAACGTCT+AGG | - | chr1.2:73729922-73729941 | None:intergenic | 40.0% | |
| TGATGAAATGTGGCGTTCAT+TGG | + | chr1.2:73727287-73727306 | MS.gene34070:CDS | 40.0% | |
| TGTTGTCTCTCTTGGATAGA+CGG | - | chr1.2:73730088-73730107 | None:intergenic | 40.0% | |
| TTAACGTCTAGGTGAAGGTA+GGG | - | chr1.2:73729911-73729930 | None:intergenic | 40.0% | |
| TTACAGGAATAGGAACCATC+TGG | - | chr1.2:73727362-73727381 | None:intergenic | 40.0% | |
| TTCCCAACAATTTCCGATTC+TGG | - | chr1.2:73728694-73728713 | None:intergenic | 40.0% | |
| TTGTCCTCTCTTCTTGGTTA+TGG | - | chr1.2:73728021-73728040 | None:intergenic | 40.0% | |
| TTTGTTAGGAGTGGTGAATG+GGG | + | chr1.2:73730926-73730945 | MS.gene34070:intron | 40.0% | |
| ! | CTATGCTGGTTATGTTCCTA+TGG | + | chr1.2:73730778-73730797 | MS.gene34070:CDS | 40.0% |
| ! | CTGATTGAGTCTAAGGTTGA+TGG | + | chr1.2:73729669-73729688 | MS.gene34070:CDS | 40.0% |
| ! | GAGCATGAAGTTGGAGTATT+TGG | + | chr1.2:73727228-73727247 | MS.gene34070:CDS | 40.0% |
| ! | GAGTATTTGGTTCGTCTTCT+AGG | + | chr1.2:73727241-73727260 | MS.gene34070:CDS | 40.0% |
| ! | GTTCTAACTTGCACGCAAAA+AGG | - | chr1.2:73729562-73729581 | None:intergenic | 40.0% |
| !! | AGAAGTAAATCCTTTGGGGT+GGG | + | chr1.2:73730256-73730275 | MS.gene34070:intron | 40.0% |
| !! | TCTTCTCTTGATGGTGAAGT+AGG | + | chr1.2:73727324-73727343 | MS.gene34070:CDS | 40.0% |
| !!! | CCAAATGGCTGTGTTTTTTG+GGG | - | chr1.2:73727956-73727975 | None:intergenic | 40.0% |
| !!! | GCATGTAGTGTGTTTTGAAG+TGG | + | chr1.2:73731774-73731793 | MS.gene34070:intron | 40.0% |
| ACGGGAACAAGTTGTTCAAC+AGG | + | chr1.2:73730644-73730663 | MS.gene34070:CDS | 45.0% | |
| AGAGGATATGAGCACTAGGT+AGG | - | chr1.2:73728392-73728411 | None:intergenic | 45.0% | |
| AGGATTGTGGTCCAAGTGAA+AGG | + | chr1.2:73727196-73727215 | MS.gene34070:CDS | 45.0% | |
| AGTGTGGTGCATAATCTCTG+TGG | + | chr1.2:73732120-73732139 | MS.gene34070:intron | 45.0% | |
| ATCTCTGTGGTGTGTACTGT+TGG | + | chr1.2:73732133-73732152 | MS.gene34070:intron | 45.0% | |
| ATGAAAGAAGCGGAGGATTG+TGG | + | chr1.2:73727183-73727202 | MS.gene34070:CDS | 45.0% | |
| ATGACTCATCTACGGGATTC+TGG | - | chr1.2:73727158-73727177 | None:intergenic | 45.0% | |
| ATGACTTCCTAGGTCAAGGT+TGG | - | chr1.2:73729399-73729418 | None:intergenic | 45.0% | |
| ATTCCATGGAATCTTCTGGG+AGG | + | chr1.2:73726943-73726962 | MS.gene34070:CDS | 45.0% | |
| ATTGGGAAGGTTTCCCGAAT+GGG | - | chr1.2:73729000-73729019 | None:intergenic | 45.0% | |
| CAAGCTCCTGTTTATTGCAC+AGG | - | chr1.2:73727644-73727663 | None:intergenic | 45.0% | |
| CCCCAAAAAACACAGCCATT+TGG | + | chr1.2:73727953-73727972 | MS.gene34070:intron | 45.0% | |
| CTTGTGGACTTCTGTATCTG+CGG | - | chr1.2:73731937-73731956 | None:intergenic | 45.0% | |
| GGAACTGCTGTAAAAAGGTG+AGG | + | chr1.2:73731649-73731668 | MS.gene34070:intron | 45.0% | |
| GGATTGTGGTCCAAGTGAAA+GGG | + | chr1.2:73727197-73727216 | MS.gene34070:CDS | 45.0% | |
| GGGGTCACAAGATCATGAAT+CGG | - | chr1.2:73729208-73729227 | None:intergenic | 45.0% | |
| GGGTCACAAGATCATGAATC+GGG | - | chr1.2:73729207-73729226 | None:intergenic | 45.0% | |
| GGGTTTAGACCAACAAGAGA+GGG | - | chr1.2:73731335-73731354 | None:intergenic | 45.0% | |
| GGTCACAAGATCATGAATCG+GGG | - | chr1.2:73729206-73729225 | None:intergenic | 45.0% | |
| GGTCCAGAATCGGAAATTGT+TGG | + | chr1.2:73728688-73728707 | MS.gene34070:intron | 45.0% | |
| GTCACAAGATCATGAATCGG+GGG | - | chr1.2:73729205-73729224 | None:intergenic | 45.0% | |
| GTTCCCGTACAAATTTGTGG+AGG | - | chr1.2:73730632-73730651 | None:intergenic | 45.0% | |
| TATAGCTGTGAGGCAGTGTT+TGG | - | chr1.2:73729881-73729900 | None:intergenic | 45.0% | |
| TATTGGGAAGGTTTCCCGAA+TGG | - | chr1.2:73729001-73729020 | None:intergenic | 45.0% | |
| TCATCCAACACATCCCAATC+TGG | - | chr1.2:73729470-73729489 | None:intergenic | 45.0% | |
| TCTCTCTTGGATAGACGGTT+GGG | - | chr1.2:73730083-73730102 | None:intergenic | 45.0% | |
| TGACTTCCTAGGTCAAGGTT+GGG | - | chr1.2:73729398-73729417 | None:intergenic | 45.0% | |
| TGATGGAGATGGTAACTGTC+AGG | + | chr1.2:73729686-73729705 | MS.gene34070:CDS | 45.0% | |
| TGCTGCAGATTGGGTATGAA+GGG | + | chr1.2:73730970-73730989 | MS.gene34070:intron | 45.0% | |
| TGCTGTAAAAAGGTGAGGAC+CGG | + | chr1.2:73731654-73731673 | MS.gene34070:intron | 45.0% | |
| TGCTTAGTCGTGTATGGGTA+AGG | - | chr1.2:73728951-73728970 | None:intergenic | 45.0% | |
| TGCTTGAGTAGGTCCAGAAT+CGG | + | chr1.2:73728678-73728697 | MS.gene34070:intron | 45.0% | |
| ! | AAGCCTTTTCCCACTAAGTG+GGG | - | chr1.2:73731274-73731293 | None:intergenic | 45.0% |
| ! | ACCTTCAGAAGAAGGGGTTT+TGG | - | chr1.2:73729326-73729345 | None:intergenic | 45.0% |
| ! | ATTTCTGAGCTTTTGGGCAG+AGG | + | chr1.2:73732221-73732240 | MS.gene34070:CDS | 45.0% |
| ! | CAAGCCTTTTCCCACTAAGT+GGG | - | chr1.2:73731275-73731294 | None:intergenic | 45.0% |
| ! | CAGAAGTAAATCCTTTGGGG+TGG | + | chr1.2:73730255-73730274 | MS.gene34070:intron | 45.0% |
| ! | GAGAGGGCTCACAAAGATTT+TGG | - | chr1.2:73731319-73731338 | None:intergenic | 45.0% |
| ! | GGGCTCACAAAGATTTTGGA+AGG | - | chr1.2:73731315-73731334 | None:intergenic | 45.0% |
| ! | TTTGGTTCGTCTTCTAGGTC+AGG | + | chr1.2:73727246-73727265 | MS.gene34070:CDS | 45.0% |
| !! | GAAGTAAATCCTTTGGGGTG+GGG | + | chr1.2:73730257-73730276 | MS.gene34070:intron | 45.0% |
| !! | GAGTCTAAGGTTGATGGAGA+TGG | + | chr1.2:73729675-73729694 | MS.gene34070:CDS | 45.0% |
| !! | TAAAGGAAGCACCACCAAAC+AGG | - | chr1.2:73730697-73730716 | None:intergenic | 45.0% |
| ACACCAAGCAAGATCGGTAG+GGG | - | chr1.2:73729227-73729246 | None:intergenic | 50.0% | |
| ACCAGCATAGAGATCTGGGT+CGG | - | chr1.2:73730768-73730787 | None:intergenic | 50.0% | |
| ACCATCAAAGGCTGCTAGAC+AGG | + | chr1.2:73727834-73727853 | MS.gene34070:CDS | 50.0% | |
| ACCTGTCTAGCAGCCTTTGA+TGG | - | chr1.2:73727838-73727857 | None:intergenic | 50.0% | |
| AGACACCAAGCAAGATCGGT+AGG | - | chr1.2:73729229-73729248 | None:intergenic | 50.0% | |
| AGAGCCAGATTGGGATGTGT+TGG | + | chr1.2:73729463-73729482 | MS.gene34070:intron | 50.0% | |
| CACACACACACATGCATGCA+TGG | - | chr1.2:73731048-73731067 | None:intergenic | 50.0% | |
| CATCCTCCCAGAAGATTCCA+TGG | - | chr1.2:73726949-73726968 | None:intergenic | 50.0% | |
| CCACTTAGTGGGAAAAGGCT+TGG | + | chr1.2:73731273-73731292 | MS.gene34070:intron | 50.0% | |
| CTGCAGACCTTCAGAAGAAG+GGG | - | chr1.2:73729332-73729351 | None:intergenic | 50.0% | |
| CTGCTGCAGATTGGGTATGA+AGG | + | chr1.2:73730969-73730988 | MS.gene34070:intron | 50.0% | |
| CTTTGGGTAGAACCACAGAG+TGG | + | chr1.2:73728357-73728376 | MS.gene34070:intron | 50.0% | |
| CTTTGTGAGCCCTCTCTTGT+TGG | + | chr1.2:73731323-73731342 | MS.gene34070:intron | 50.0% | |
| GACACCAAGCAAGATCGGTA+GGG | - | chr1.2:73729228-73729247 | None:intergenic | 50.0% | |
| GATCCTGACGTTGTTCGATG+GGG | + | chr1.2:73726744-73726763 | MS.gene34070:CDS | 50.0% | |
| GCCAAAACCCCTTCTTCTGA+AGG | + | chr1.2:73729322-73729341 | MS.gene34070:intron | 50.0% | |
| GCTGCAGACCTTCAGAAGAA+GGG | - | chr1.2:73729333-73729352 | None:intergenic | 50.0% | |
| GGAGATGGTAACTGTCAGGT+TGG | + | chr1.2:73729690-73729709 | MS.gene34070:intron | 50.0% | |
| GGATCCTGACGTTGTTCGAT+GGG | + | chr1.2:73726743-73726762 | MS.gene34070:CDS | 50.0% | |
| GGGGTTTAGACCAACAAGAG+AGG | - | chr1.2:73731336-73731355 | None:intergenic | 50.0% | |
| GTCTCTCTTGGATAGACGGT+TGG | - | chr1.2:73730084-73730103 | None:intergenic | 50.0% | |
| TACCATCTGCGTGCTTGAGT+AGG | + | chr1.2:73728667-73728686 | MS.gene34070:intron | 50.0% | |
| TAGCCAGTCCTGTGCATCTA+CGG | - | chr1.2:73727000-73727019 | None:intergenic | 50.0% | |
| TCCTAGGTCAAGGTTGGGAT+GGG | - | chr1.2:73729393-73729412 | None:intergenic | 50.0% | |
| TCGGACGAGTCTTCTCTTGA+TGG | + | chr1.2:73727315-73727334 | MS.gene34070:CDS | 50.0% | |
| TGAATCGGGGGATCACAACA+CGG | - | chr1.2:73729193-73729212 | None:intergenic | 50.0% | |
| TGCTGCAGACCTTCAGAAGA+AGG | - | chr1.2:73729334-73729353 | None:intergenic | 50.0% | |
| TGGATCCTGACGTTGTTCGA+TGG | + | chr1.2:73726742-73726761 | MS.gene34070:CDS | 50.0% | |
| TTCCTAGGTCAAGGTTGGGA+TGG | - | chr1.2:73729394-73729413 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTTTCCCACTAAG+TGG | - | chr1.2:73731276-73731295 | None:intergenic | 50.0% |
| !!! | GGCTGTGTTTTTTGGGGAGA+TGG | - | chr1.2:73727950-73727969 | None:intergenic | 50.0% |
| ACACCGAGTTACGACACCAG+GGG | - | chr1.2:73726811-73726830 | None:intergenic | 55.0% | |
| ACGCGTGGAAGCGGTGAAAT+CGG | + | chr1.2:73728734-73728753 | MS.gene34070:intron | 55.0% | |
| ACTAAGTGGGGCCCTCTACA+TGG | - | chr1.2:73731262-73731281 | None:intergenic | 55.0% | |
| ATGTAGAGGGCCCCACTTAG+TGG | + | chr1.2:73731261-73731280 | MS.gene34070:intron | 55.0% | |
| CACACCGAGTTACGACACCA+GGG | - | chr1.2:73726812-73726831 | None:intergenic | 55.0% | |
| CATCCGTAGATGCACAGGAC+TGG | + | chr1.2:73726994-73727013 | MS.gene34070:CDS | 55.0% | |
| CCCGATACTTCAAGGAGACG+CGG | - | chr1.2:73728760-73728779 | None:intergenic | 55.0% | |
| CCTGCGAACCCGATACTTCA+AGG | - | chr1.2:73728768-73728787 | None:intergenic | 55.0% | |
| CTCTTGGATAGACGGTTGGG+TGG | - | chr1.2:73730080-73730099 | None:intergenic | 55.0% | |
| GAATCGGGGGATCACAACAC+GGG | - | chr1.2:73729192-73729211 | None:intergenic | 55.0% | |
| GACCTACTCAAGCACGCAGA+TGG | - | chr1.2:73728672-73728691 | None:intergenic | 55.0% | |
| GCCGCGTCTCCTTGAAGTAT+CGG | + | chr1.2:73728756-73728775 | MS.gene34070:intron | 55.0% | |
| GGAAATTGTTGGGAACGGCC+AGG | + | chr1.2:73728699-73728718 | MS.gene34070:intron | 55.0% | |
| GGGTAGAACCACAGAGTGGA+GGG | + | chr1.2:73728361-73728380 | MS.gene34070:intron | 55.0% | |
| GGTAGAACCACAGAGTGGAG+GGG | + | chr1.2:73728362-73728381 | MS.gene34070:intron | 55.0% | |
| GTTGCAGGCTGCTGCAGATT+GGG | + | chr1.2:73730961-73730980 | MS.gene34070:CDS | 55.0% | |
| TCACACCGAGTTACGACACC+AGG | - | chr1.2:73726813-73726832 | None:intergenic | 55.0% | |
| TCCCATCCCAACCTTGACCT+AGG | + | chr1.2:73729389-73729408 | MS.gene34070:intron | 55.0% | |
| TCCGACCCAGATCTCTATGC+TGG | + | chr1.2:73730764-73730783 | MS.gene34070:CDS | 55.0% | |
| TGACCCCTACCGATCTTGCT+TGG | + | chr1.2:73729221-73729240 | MS.gene34070:intron | 55.0% | |
| TGGGTAGAACCACAGAGTGG+AGG | + | chr1.2:73728360-73728379 | MS.gene34070:intron | 55.0% | |
| TGTAGAGGGCCCCACTTAGT+GGG | + | chr1.2:73731262-73731281 | MS.gene34070:intron | 55.0% | |
| TTTCCACATGGTCGATCCCC+TGG | + | chr1.2:73726792-73726811 | MS.gene34070:CDS | 55.0% | |
| ! | ACCGCTTCCACGCGTTTTTG+CGG | - | chr1.2:73728729-73728748 | None:intergenic | 55.0% |
| ! | CCGCGTCTCCTTGAAGTATC+GGG | + | chr1.2:73728757-73728776 | MS.gene34070:intron | 55.0% |
| !! | AATCCTTTGGGGTGGGGTAG+AGG | + | chr1.2:73730263-73730282 | MS.gene34070:intron | 55.0% |
| !! | ATCCTTTGGGGTGGGGTAGA+GGG | + | chr1.2:73730264-73730283 | MS.gene34070:intron | 55.0% |
| !! | CCTTGAAGTATCGGGTTCGC+AGG | + | chr1.2:73728765-73728784 | MS.gene34070:intron | 55.0% |
| !! | GAAGTATCGGGTTCGCAGGT+CGG | + | chr1.2:73728769-73728788 | MS.gene34070:intron | 55.0% |
| !! | GATCCCCTGGTGTCGTAACT+CGG | + | chr1.2:73726805-73726824 | MS.gene34070:CDS | 55.0% |
| AACCCTCTACCCCACCCCAA+AGG | - | chr1.2:73730269-73730288 | None:intergenic | 60.0% | |
| ACACCAGGGGATCGACCATG+TGG | - | chr1.2:73726798-73726817 | None:intergenic | 60.0% | |
| AGGATCGCCGCAAAAACGCG+TGG | + | chr1.2:73728719-73728738 | MS.gene34070:intron | 60.0% | |
| AGGCCCCATCGAACAACGTC+AGG | - | chr1.2:73726750-73726769 | None:intergenic | 60.0% | |
| CACATAACGCTGCGACCTGC+AGG | + | chr1.2:73727493-73727512 | MS.gene34070:intron | 60.0% | |
| CGTTGCAGGCTGCTGCAGAT+TGG | + | chr1.2:73730960-73730979 | MS.gene34070:CDS | 60.0% | |
| GCCGCAAAAACGCGTGGAAG+CGG | + | chr1.2:73728725-73728744 | MS.gene34070:intron | 60.0% | |
| GCGAGCATCCGTAGATGCAC+AGG | + | chr1.2:73726989-73727008 | MS.gene34070:CDS | 60.0% | |
| GGGCCCCACTTAGTGGGAAA+AGG | + | chr1.2:73731268-73731287 | MS.gene34070:intron | 60.0% | |
| GGGCGATCATGTCACGTTGC+AGG | + | chr1.2:73730946-73730965 | MS.gene34070:CDS | 60.0% | |
| TCACGGGAGCAGCACCAGTT+TGG | - | chr1.2:73729953-73729972 | None:intergenic | 60.0% | |
| ! | ACGCGTTTTTGCGGCGATCC+TGG | - | chr1.2:73728720-73728739 | None:intergenic | 60.0% |
| AGGTGTGCCCCTCCACTCTG+TGG | - | chr1.2:73728372-73728391 | None:intergenic | 65.0% | |
| ! | CGGGTTCGCAGGTCGGTTCA+CGG | + | chr1.2:73728776-73728795 | MS.gene34070:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 73726723 | 73732273 | 73726723 | ID=MS.gene34070 |
| chr1.2 | mRNA | 73726723 | 73732273 | 73726723 | ID=MS.gene34070.t1;Parent=MS.gene34070 |
| chr1.2 | exon | 73726723 | 73727047 | 73726723 | ID=MS.gene34070.t1.exon1;Parent=MS.gene34070.t1 |
| chr1.2 | CDS | 73726723 | 73727047 | 73726723 | ID=cds.MS.gene34070.t1;Parent=MS.gene34070.t1 |
| chr1.2 | exon | 73727142 | 73727377 | 73727142 | ID=MS.gene34070.t1.exon2;Parent=MS.gene34070.t1 |
| chr1.2 | CDS | 73727142 | 73727377 | 73727142 | ID=cds.MS.gene34070.t1;Parent=MS.gene34070.t1 |
| chr1.2 | exon | 73727782 | 73727855 | 73727782 | ID=MS.gene34070.t1.exon3;Parent=MS.gene34070.t1 |
| chr1.2 | CDS | 73727782 | 73727855 | 73727782 | ID=cds.MS.gene34070.t1;Parent=MS.gene34070.t1 |
| chr1.2 | exon | 73729653 | 73729707 | 73729653 | ID=MS.gene34070.t1.exon4;Parent=MS.gene34070.t1 |
| chr1.2 | CDS | 73729653 | 73729707 | 73729653 | ID=cds.MS.gene34070.t1;Parent=MS.gene34070.t1 |
| chr1.2 | exon | 73730591 | 73730665 | 73730591 | ID=MS.gene34070.t1.exon5;Parent=MS.gene34070.t1 |
| chr1.2 | CDS | 73730591 | 73730665 | 73730591 | ID=cds.MS.gene34070.t1;Parent=MS.gene34070.t1 |
| chr1.2 | exon | 73730758 | 73730831 | 73730758 | ID=MS.gene34070.t1.exon6;Parent=MS.gene34070.t1 |
| chr1.2 | CDS | 73730758 | 73730831 | 73730758 | ID=cds.MS.gene34070.t1;Parent=MS.gene34070.t1 |
| chr1.2 | exon | 73730934 | 73730982 | 73730934 | ID=MS.gene34070.t1.exon7;Parent=MS.gene34070.t1 |
| chr1.2 | CDS | 73730934 | 73730982 | 73730934 | ID=cds.MS.gene34070.t1;Parent=MS.gene34070.t1 |
| chr1.2 | exon | 73731874 | 73731958 | 73731874 | ID=MS.gene34070.t1.exon8;Parent=MS.gene34070.t1 |
| chr1.2 | CDS | 73731874 | 73731958 | 73731874 | ID=cds.MS.gene34070.t1;Parent=MS.gene34070.t1 |
| chr1.2 | exon | 73732217 | 73732273 | 73732217 | ID=MS.gene34070.t1.exon9;Parent=MS.gene34070.t1 |
| chr1.2 | CDS | 73732217 | 73732273 | 73732217 | ID=cds.MS.gene34070.t1;Parent=MS.gene34070.t1 |
| Gene Sequence |
| Protein sequence |
