AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34682

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34682.t1 MTR_8g055840 99.344 610 4 0 1 610 1 610 0.0 1270
MS.gene34682.t1 MTR_5g040360 84.590 610 93 1 1 610 1 609 0.0 1108
MS.gene34682.t1 MTR_3g040370 71.757 609 166 4 2 609 3 606 0.0 946
MS.gene34682.t1 MTR_4g098890 68.874 604 174 5 2 597 3 600 0.0 912
MS.gene34682.t1 MTR_8g100075 54.160 613 251 6 17 608 25 628 0.0 712
MS.gene34682.t1 MTR_7g076170 55.263 608 245 6 17 601 23 626 0.0 711
MS.gene34682.t1 MTR_0019s0120 54.803 635 247 9 3 609 13 635 0.0 708
MS.gene34682.t1 MTR_1g101370 57.383 596 240 8 18 601 25 618 0.0 708
MS.gene34682.t1 MTR_8g432680 52.883 607 262 6 17 601 27 631 0.0 680
MS.gene34682.t1 MTR_7g006060 52.964 523 234 4 84 594 43 565 0.0 585
MS.gene34682.t1 MTR_0019s0120 52.809 534 212 9 3 508 13 534 0.0 562
MS.gene34682.t1 MTR_8g071280 45.660 530 278 7 84 607 70 595 2.50e-166 488
MS.gene34682.t1 MTR_8g432620 44.821 531 265 8 82 600 86 600 5.63e-164 481
MS.gene34682.t1 MTR_7g076150 45.018 542 270 8 71 600 62 587 2.19e-163 479
MS.gene34682.t1 MTR_5g026930 42.833 600 313 10 9 600 13 590 4.46e-163 479
MS.gene34682.t1 MTR_5g080720 43.178 535 279 11 75 597 116 637 8.46e-154 457
MS.gene34682.t1 MTR_1g442840 41.096 584 302 12 20 575 18 587 3.63e-150 447
MS.gene34682.t1 MTR_1g075900 42.755 559 286 12 73 610 79 624 9.48e-148 441
MS.gene34682.t1 MTR_3g068990 44.465 533 263 12 82 598 151 666 1.30e-147 442
MS.gene34682.t1 MTR_1g069785 42.910 536 273 10 87 602 65 587 1.75e-147 439
MS.gene34682.t1 MTR_1g442840 45.607 478 234 9 111 575 10 474 1.28e-146 434
MS.gene34682.t1 MTR_1g029730 44.234 529 271 12 84 599 141 658 4.11e-145 435
MS.gene34682.t1 MTR_7g076150 45.534 459 222 8 154 600 2 444 6.21e-139 412
MS.gene34682.t1 MTR_5g080720 43.061 490 248 12 63 534 98 574 1.45e-135 408
MS.gene34682.t1 MTR_5g026930 42.913 508 261 10 9 508 13 499 5.76e-133 399
MS.gene34682.t1 MTR_3g096480 41.712 549 280 18 73 600 247 776 6.45e-132 405
MS.gene34682.t1 MTR_5g083150 39.388 523 279 13 92 600 100 598 2.02e-130 395
MS.gene34682.t1 MTR_3g071530 38.803 518 285 11 92 600 152 646 9.18e-127 387
MS.gene34682.t1 MTR_8g093880 41.292 511 267 14 93 584 298 794 1.30e-126 392
MS.gene34682.t1 MTR_8g076650 41.811 519 264 15 93 591 387 887 1.40e-125 392
MS.gene34682.t1 MTR_5g021100 40.406 542 282 16 75 591 305 830 1.52e-125 390
MS.gene34682.t1 MTR_1g051055 38.795 531 292 12 87 600 89 603 1.18e-122 375
MS.gene34682.t1 MTR_3g088790 40.076 529 279 17 92 600 232 742 2.08e-121 377
MS.gene34682.t1 MTR_4g083030 32.065 552 333 11 70 599 72 603 2.62e-93 299
MS.gene34682.t1 MTR_1g022255 33.026 542 312 16 76 600 192 699 1.31e-90 295
MS.gene34682.t1 MTR_3g074780 30.648 571 344 14 70 605 140 693 1.31e-89 292
MS.gene34682.t1 MTR_5g064080 30.212 566 333 14 70 600 132 670 2.05e-84 278
MS.gene34682.t1 MTR_1g022255 28.186 408 248 12 76 467 192 570 2.71e-45 169
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34682.t1 AT1G26850 80.163 615 113 3 3 610 4 616 0.0 1057
MS.gene34682.t1 AT1G26850 80.163 615 113 3 3 610 4 616 0.0 1057
MS.gene34682.t1 AT4G18030 68.272 602 180 4 7 602 9 605 0.0 881
MS.gene34682.t1 AT1G26850 79.000 500 98 2 3 495 4 503 0.0 851
MS.gene34682.t1 AT4G10440 55.122 615 247 5 7 601 12 617 0.0 727
MS.gene34682.t1 AT1G33170 53.155 634 253 6 5 601 9 635 0.0 713
MS.gene34682.t1 AT2G45750 54.058 616 253 9 17 608 19 628 0.0 684
MS.gene34682.t1 AT4G00750 51.809 608 279 4 16 609 24 631 0.0 677
MS.gene34682.t1 AT2G43200 52.031 517 242 4 84 595 91 606 0.0 567
MS.gene34682.t1 AT2G43200 52.031 517 242 4 84 595 91 606 0.0 567
MS.gene34682.t1 AT1G31850 42.114 615 328 14 2 607 8 603 7.67e-173 504
MS.gene34682.t1 AT1G31850 42.114 615 328 14 2 607 8 603 7.67e-173 504
MS.gene34682.t1 AT1G31850 42.114 615 328 14 2 607 8 603 7.67e-173 504
MS.gene34682.t1 AT1G31850 42.114 615 328 14 2 607 8 603 7.67e-173 504
MS.gene34682.t1 AT4G19120 43.942 553 295 9 69 610 52 600 2.43e-169 495
MS.gene34682.t1 AT4G19120 43.942 553 295 9 69 610 52 600 2.43e-169 495
MS.gene34682.t1 AT4G00740 43.049 597 302 11 22 606 29 599 9.25e-165 484
MS.gene34682.t1 AT4G00740 43.049 597 302 11 22 606 29 599 9.25e-165 484
MS.gene34682.t1 AT5G06050 44.090 533 271 12 80 599 145 663 4.10e-150 449
MS.gene34682.t1 AT1G04430 41.799 567 287 12 64 602 64 615 1.49e-145 435
MS.gene34682.t1 AT1G04430 41.799 567 287 12 64 602 64 615 1.49e-145 435
MS.gene34682.t1 AT1G04430 41.799 567 287 12 64 602 64 615 1.49e-145 435
MS.gene34682.t1 AT2G39750 41.423 548 292 11 69 598 154 690 1.52e-145 437
MS.gene34682.t1 AT4G14360 43.444 511 259 10 82 575 74 571 3.44e-143 429
MS.gene34682.t1 AT4G14360 43.444 511 259 10 82 575 74 571 3.44e-143 429
MS.gene34682.t1 AT3G23300 42.329 541 278 12 82 602 77 603 8.57e-143 427
MS.gene34682.t1 AT3G23300 42.329 541 278 12 82 602 77 603 8.57e-143 427
MS.gene34682.t1 AT1G77260 40.418 574 304 14 48 598 96 654 2.26e-140 423
MS.gene34682.t1 AT4G19120 44.789 451 235 8 69 508 52 499 3.53e-139 414
MS.gene34682.t1 AT5G14430 39.234 627 331 16 10 608 8 612 9.29e-137 412
MS.gene34682.t1 AT5G14430 38.915 627 333 16 10 608 8 612 3.70e-135 408
MS.gene34682.t1 AT2G34300 41.714 525 272 13 93 600 250 757 8.75e-130 399
MS.gene34682.t1 AT2G34300 41.714 525 272 13 93 600 250 757 8.75e-130 399
MS.gene34682.t1 AT2G34300 41.714 525 272 13 93 600 250 757 8.75e-130 399
MS.gene34682.t1 AT5G04060 40.076 529 285 11 87 600 86 597 1.38e-129 393
MS.gene34682.t1 AT1G29470 41.714 525 272 14 93 600 250 757 5.32e-129 397
MS.gene34682.t1 AT1G29470 41.714 525 272 14 93 600 250 757 5.32e-129 397
MS.gene34682.t1 AT5G64030 42.095 506 262 14 93 580 308 800 5.71e-129 399
MS.gene34682.t1 AT3G10200 39.474 532 286 13 87 600 75 588 4.73e-127 387
MS.gene34682.t1 AT3G56080 38.921 519 282 11 93 600 114 608 2.85e-126 385
MS.gene34682.t1 AT3G51070 39.798 593 302 20 36 600 324 889 3.63e-126 393
MS.gene34682.t1 AT2G40280 37.524 525 286 12 89 600 86 581 6.41e-126 384
MS.gene34682.t1 AT3G10200 38.921 519 275 14 74 573 67 562 3.92e-118 363
MS.gene34682.t1 AT3G56080 40.625 448 239 10 93 529 114 545 2.43e-112 347
MS.gene34682.t1 AT3G51070 40.962 520 260 18 36 529 324 822 4.24e-109 347
MS.gene34682.t1 AT1G13860 34.522 533 297 14 82 585 79 588 1.74e-95 305
MS.gene34682.t1 AT1G13860 34.522 533 297 14 82 585 79 588 1.74e-95 305
MS.gene34682.t1 AT1G13860 34.522 533 297 14 82 585 79 588 1.74e-95 305
MS.gene34682.t1 AT1G13860 34.522 533 297 14 82 585 79 588 1.74e-95 305
MS.gene34682.t1 AT2G03480 30.990 626 347 16 10 599 16 592 1.17e-91 295
MS.gene34682.t1 AT2G03480 31.200 625 358 16 10 599 16 603 9.61e-91 293
MS.gene34682.t1 AT1G13860 37.188 441 239 12 171 585 4 432 5.21e-88 281
MS.gene34682.t1 AT1G19430 31.955 532 317 15 84 600 221 722 1.51e-85 282
MS.gene34682.t1 AT1G19430 31.955 532 317 15 84 600 221 722 1.51e-85 282
MS.gene34682.t1 AT1G78240 30.742 566 337 14 70 599 132 678 3.44e-83 275
MS.gene34682.t1 AT1G78240 30.742 566 337 14 70 599 132 678 3.44e-83 275
MS.gene34682.t1 AT2G03480 31.461 356 219 7 57 395 52 399 4.06e-50 179
MS.gene34682.t1 AT1G19430 27.960 397 247 12 87 469 224 595 4.23e-43 164

Find 155 sgRNAs with CRISPR-Local

Find 243 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGGTTATTGGGTGCTTTC+TGG 0.105198 8.1:-46045554 MS.gene34682:CDS
TATCAGCACCTTGAGGAAAT+TGG 0.176986 8.1:+46046386 None:intergenic
TGCTGTTTCTTCTATATATT+GGG 0.197614 8.1:-46046862 MS.gene34682:CDS
TGTGAATCAAAACTTAAATT+TGG 0.201442 8.1:+46046757 None:intergenic
ACTCCGACTCCTAAAGTTTC+TGG 0.234576 8.1:-46044909 MS.gene34682:CDS
GTGCTGTTTCTTCTATATAT+TGG 0.235126 8.1:-46046863 MS.gene34682:CDS
TTCTAAGGCCTGGTGGTTAT+TGG 0.265507 8.1:-46045565 MS.gene34682:CDS
CAAGTTGGGGTGCATATCTT+TGG 0.273541 8.1:-46045908 MS.gene34682:CDS
GTTTCTAGTGGTTCTATTCC+TGG 0.277975 8.1:-46044837 MS.gene34682:CDS
TCTAAGGCCTGGTGGTTATT+GGG 0.298345 8.1:-46045564 MS.gene34682:CDS
CGGAAGATACCGCAACATTA+TGG 0.304526 8.1:-46044727 MS.gene34682:CDS
AGATCGCCACCAGAAACTTT+AGG 0.312284 8.1:+46044900 None:intergenic
CGAAGTCGATGTGTTAATTA+AGG 0.314319 8.1:-46043549 MS.gene34682:CDS
AATTGCTGTCAAACAGTATT+GGG 0.341304 8.1:-46043444 MS.gene34682:CDS
AACCAAGTGCTGCTGATAAT+AGG 0.347469 8.1:-46046924 MS.gene34682:CDS
CATATGTCAGGTTGCAAGTT+GGG 0.349075 8.1:-46045922 MS.gene34682:intron
ATTAATTCACTGTTGGATTC+CGG 0.352872 8.1:-46044747 MS.gene34682:CDS
CGCCTTCTGGTCGCAATATC+CGG 0.354463 8.1:+46043588 None:intergenic
AGAAGGCTGAAATTGCAATT+TGG 0.354585 8.1:-46045412 MS.gene34682:CDS
GTGCAGATCTTTATAGTAGT+TGG 0.359407 8.1:-46046889 MS.gene34682:CDS
GTTCTCGCTGTTTGATTCCA+TGG 0.364915 8.1:-46045734 MS.gene34682:CDS
ATTAAGGTAAAGAAGTTAAT+CGG 0.370727 8.1:-46043533 MS.gene34682:CDS
GCATGGCAAAGAAGTGGTTT+TGG 0.370846 8.1:-46046838 MS.gene34682:CDS
CGGATTATGACAGCGCCTTC+TGG 0.379691 8.1:+46043575 None:intergenic
AAAGGTGTTACATACCCTTT+TGG 0.379736 8.1:+46046538 None:intergenic
TATGATCTCATTCATGCTAA+TGG 0.387963 8.1:-46044423 MS.gene34682:CDS
ATCTTAAACCATTTCCAAAC+AGG 0.389098 8.1:-46044881 MS.gene34682:CDS
ATCAGCACCTTGAGGAAATT+GGG 0.391471 8.1:+46046387 None:intergenic
TATGGATATGAATGCTGGTT+TGG 0.391975 8.1:-46044709 MS.gene34682:CDS
TCCTCCTTTGGTCTCTGCCA+TGG 0.397409 8.1:+46045500 None:intergenic
TTGAGAAGGCTATTCAGAAT+TGG 0.398684 8.1:-46046453 MS.gene34682:CDS
ACGGCACTCGACACCGGTTG+TGG 0.400333 8.1:-46046310 MS.gene34682:CDS
AATGAGATGGAATATGAAAT+TGG 0.400581 8.1:-46043507 MS.gene34682:CDS
TAGTTGACCTTCCAATTGAT+TGG 0.405243 8.1:+46045527 None:intergenic
GGGACGTAATCCCTACTCTT+AGG 0.411124 8.1:+46046508 None:intergenic
TTCTCGCTGTTTGATTCCAT+GGG 0.411610 8.1:-46045733 MS.gene34682:CDS
AGGGGTGTACCTGCTGTTAT+TGG 0.412993 8.1:-46045813 MS.gene34682:CDS
GCATATAGCCTGTTTGGAAA+TGG 0.416366 8.1:+46044873 None:intergenic
TTGTAAGGTGCATTAGCATA+AGG 0.420580 8.1:+46046487 None:intergenic
GGGATCGCATATAGCCTGTT+TGG 0.420901 8.1:+46044867 None:intergenic
CATAATGTTGCGGTATCTTC+CGG 0.426759 8.1:+46044728 None:intergenic
CAAGAAAATTAATTCACTGT+TGG 0.428445 8.1:-46044754 MS.gene34682:CDS
TGCCATGTCGTTTGCACCGA+GGG 0.428690 8.1:-46045871 MS.gene34682:CDS
TCTTCCTCGAGTTCCTCCTT+TGG 0.435137 8.1:+46045488 None:intergenic
ACAGCAATTAGTACTTTCTC+AGG 0.435226 8.1:+46043458 None:intergenic
AAACACCTTAGTGTTCGAAT+TGG 0.435639 8.1:+46046702 None:intergenic
CAATGTAACTTCTCTTCCTC+TGG 0.435812 8.1:+46046574 None:intergenic
TCAGAATTGGATCCAATATG+AGG 0.436848 8.1:-46046440 MS.gene34682:CDS
AGGTTGCTAAGAAACTTTGC+TGG 0.437795 8.1:-46045448 MS.gene34682:CDS
TAATTGCTGTCAAACAGTAT+TGG 0.437862 8.1:-46043445 MS.gene34682:CDS
ATCTTGACACGGAGTGTAAT+CGG 0.437871 8.1:+46046657 None:intergenic
TGAATGAGATCATATGTTCT+TGG 0.437879 8.1:+46044432 None:intergenic
ATGGATATGAATGCTGGTTT+GGG 0.443758 8.1:-46044708 MS.gene34682:CDS
ATTTGGAACTACATCACATT+CGG 0.450872 8.1:+46046774 None:intergenic
TTCTTACCATTTGCTCCCCA+TGG 0.455409 8.1:+46045717 None:intergenic
TTGTCTGCTACGACATGATT+CGG 0.455765 8.1:+46045373 None:intergenic
CTCACTGTCCCATCATTGAT+AGG 0.457820 8.1:+46046334 None:intergenic
TGATTGGCATCTATCATGAT+TGG 0.458687 8.1:-46044584 MS.gene34682:intron
CATGCATACCAGACATCATC+AGG 0.462999 8.1:+46045314 None:intergenic
TGGAAGTTGATAGAGTTCTA+AGG 0.464058 8.1:-46045580 MS.gene34682:CDS
AACATTATGGATATGAATGC+TGG 0.465021 8.1:-46044714 MS.gene34682:CDS
GCCATGTCGAAGGCTCTTGA+TGG 0.465360 8.1:+46045762 None:intergenic
TTGATTCCATGGGGAGCAAA+TGG 0.467921 8.1:-46045723 MS.gene34682:intron
TCTGTTATTCCTATCAATGA+TGG 0.468006 8.1:-46046343 MS.gene34682:CDS
TTTCTGGTCCTCCAATCAAT+TGG 0.468116 8.1:-46045538 MS.gene34682:CDS
TGTATGATCCCAGCACCAAA+AGG 0.471853 8.1:-46046553 MS.gene34682:CDS
CCTCAGATCCTGATGATGTC+TGG 0.472305 8.1:-46045322 MS.gene34682:intron
AAGTACAATTTGCTCTAGAA+AGG 0.476126 8.1:-46045833 MS.gene34682:CDS
AGTACAATTTGCTCTAGAAA+GGG 0.480566 8.1:-46045832 MS.gene34682:CDS
GGAAATTGGGTTCCACCACC+AGG 0.486235 8.1:+46046400 None:intergenic
ACATAAACATACCCCACAAC+CGG 0.490951 8.1:+46046297 None:intergenic
AAAAGGAGATAGTATAGCAT+TGG 0.491210 8.1:-46046815 MS.gene34682:CDS
TGTAAGGTGCATTAGCATAA+GGG 0.497446 8.1:+46046488 None:intergenic
ATATATGAGCGAGGATTGAT+TGG 0.505447 8.1:-46044600 MS.gene34682:CDS
GTCCTATTATCAGCAGCACT+TGG 0.509665 8.1:+46046922 None:intergenic
CGGCACTCGACACCGGTTGT+GGG 0.509777 8.1:-46046309 MS.gene34682:CDS
TCTTCTATATATTGGGAGCA+TGG 0.513373 8.1:-46046855 MS.gene34682:CDS
TGGCCTCTTTAGTTTGTACC+AGG 0.518458 8.1:-46044403 MS.gene34682:CDS
CTATTCATTCATCTAAGTCA+TGG 0.518486 8.1:-46044671 MS.gene34682:CDS
TCGAAGGCTCTTGATGGGTA+TGG 0.523510 8.1:+46045768 None:intergenic
CTACTCTTAGGCCATGGAAA+AGG 0.529226 8.1:+46046520 None:intergenic
ACATTCTTCTCGAGATGGAC+CGG 0.531231 8.1:-46043607 MS.gene34682:CDS
TTGACCTTCCAATTGATTGG+AGG 0.532026 8.1:+46045530 None:intergenic
TATGTCTCAGAAGAAACTCC+AGG 0.532169 8.1:+46044819 None:intergenic
TATCCTGGTACAAACTAAAG+AGG 0.534977 8.1:+46044400 None:intergenic
TCATATGTCAGGTTGCAAGT+TGG 0.542053 8.1:-46045923 MS.gene34682:intron
CAAGAGTCTCACAGTTGAGA+AGG 0.546705 8.1:-46046467 MS.gene34682:CDS
GAAGGAACACTTACTTATCC+TGG 0.549922 8.1:+46044385 None:intergenic
ATATGTCAGGTTGCAAGTTG+GGG 0.550068 8.1:-46045921 MS.gene34682:intron
AAACAGTATTGGGTTACTGA+TGG 0.550680 8.1:-46043434 MS.gene34682:CDS
TCAACTGTGAGACTCTTGTA+AGG 0.555125 8.1:+46046472 None:intergenic
GGCACTCGACACCGGTTGTG+GGG 0.556598 8.1:-46046308 MS.gene34682:intron
AGTTTCTTCTGAGACATACC+AGG 0.557089 8.1:-46044814 MS.gene34682:CDS
GTTGATAGAGTTCTAAGGCC+TGG 0.557635 8.1:-46045575 MS.gene34682:CDS
CTGTTATTCCTATCAATGAT+GGG 0.558379 8.1:-46046342 MS.gene34682:CDS
TGAATCCAATTCGAACACTA+AGG 0.559388 8.1:-46046707 MS.gene34682:CDS
CAGTGATTATTGTGTTGATG+TGG 0.563280 8.1:+46043406 None:intergenic
AGAACAAAGAAAGATTGAAG+AGG 0.565209 8.1:-46045468 MS.gene34682:CDS
TGGTCCTCCAATCAATTGGA+AGG 0.566122 8.1:-46045534 MS.gene34682:CDS
AGTTAATCGGAGGAATGAGA+TGG 0.569106 8.1:-46043520 MS.gene34682:CDS
CAGAATTGGATCCAATATGA+GGG 0.569553 8.1:-46046439 MS.gene34682:CDS
TGTGCTTCGTGAGAGTCCCT+CGG 0.570141 8.1:+46045855 None:intergenic
ATAGAACCACTAGAAACTCT+AGG 0.570235 8.1:+46044843 None:intergenic
TATTCATTCATCTAAGTCAT+GGG 0.572388 8.1:-46044670 MS.gene34682:CDS
GGTTGCTAAGAAACTTTGCT+GGG 0.577899 8.1:-46045447 MS.gene34682:CDS
CCATGTCGAAGGCTCTTGAT+GGG 0.579790 8.1:+46045763 None:intergenic
TAATCCCTACTCTTAGGCCA+TGG 0.581203 8.1:+46046514 None:intergenic
GTGAGGACGGCACTCGACAC+CGG 0.585130 8.1:-46046316 MS.gene34682:CDS
CCAGACATCATCAGGATCTG+AGG 0.586281 8.1:+46045322 None:intergenic
CTGGGAGAAGAAGTCTGAGA+AGG 0.587700 8.1:-46045429 MS.gene34682:CDS
AGAAGACATTCTTCTCGAGA+TGG 0.592742 8.1:-46043612 MS.gene34682:CDS
AGTACTTTCTCAGGAACAAG+AGG 0.593177 8.1:+46043467 None:intergenic
CTTTAGGTATAAGAAAATGA+AGG 0.594138 8.1:-46044940 MS.gene34682:intron
GTATGATCCCAGCACCAAAA+GGG 0.596741 8.1:-46046552 MS.gene34682:CDS
TATGAAATTGGTTGATCATG+AGG 0.596829 8.1:-46043495 MS.gene34682:CDS
TTGGGAGCATGGCAAAGAAG+TGG 0.598147 8.1:-46046844 MS.gene34682:CDS
ACCAGGATGATAACAAAATG+TGG 0.598954 8.1:-46044797 MS.gene34682:CDS
CCACCAGAAACTTTAGGAGT+CGG 0.599866 8.1:+46044906 None:intergenic
GACCGGATATTGCGACCAGA+AGG 0.601380 8.1:-46043590 MS.gene34682:CDS
GTCCCTCGGTGCAAACGACA+TGG 0.602825 8.1:+46045869 None:intergenic
TGCAGATGGAATGTATATGA+TGG 0.612639 8.1:-46045600 MS.gene34682:intron
CAATGATGGGACAGTGAGGA+CGG 0.612966 8.1:-46046329 MS.gene34682:CDS
TTTGACTAACTTCACCAGCA+TGG 0.614335 8.1:+46046734 None:intergenic
CATTCATATCCATAATGTTG+CGG 0.623801 8.1:+46044718 None:intergenic
GAGACCAAAGGAGGAACTCG+AGG 0.624522 8.1:-46045492 MS.gene34682:CDS
ATAGCTGAGAAAAGTACGCT+CGG 0.625053 8.1:-46044627 MS.gene34682:CDS
GAACCACTAGAAACTCTAGG+AGG 0.628946 8.1:+46044846 None:intergenic
CCCATCAAGAGCCTTCGACA+TGG 0.629295 8.1:-46045763 MS.gene34682:CDS
AGAGAGACATTGTCCTCCAG+AGG 0.632063 8.1:-46046590 MS.gene34682:CDS
ATCCCTCCTAGAGTTTCTAG+TGG 0.638071 8.1:-46044849 MS.gene34682:CDS
GGATTCGCAAAATTCTACAC+TGG 0.639914 8.1:+46045343 None:intergenic
AACCACTAGAAACTCTAGGA+GGG 0.640857 8.1:+46044847 None:intergenic
ACACTCCGTGTCAAGATCAA+CGG 0.641064 8.1:-46046651 MS.gene34682:CDS
GTACAATTTGCTCTAGAAAG+GGG 0.642156 8.1:-46045831 MS.gene34682:CDS
AGAACAATGAGCCATGTCGA+AGG 0.642478 8.1:+46045752 None:intergenic
TTAACACATCGACTTCGTCA+CGG 0.644355 8.1:+46043555 None:intergenic
GGTGGAACCCAATTTCCTCA+AGG 0.645103 8.1:-46046394 MS.gene34682:CDS
GAAAGCACCCAATAACCACC+AGG 0.649776 8.1:+46045557 None:intergenic
GGAAGGTCAACTACAAACCA+TGG 0.650669 8.1:-46045517 MS.gene34682:CDS
CCGACTCCTAAAGTTTCTGG+TGG 0.658204 8.1:-46044906 MS.gene34682:CDS
ATATATTTATCAGCACCTTG+AGG 0.663185 8.1:+46046379 None:intergenic
TGTAACTTCTCTTCCTCTGG+AGG 0.663464 8.1:+46046577 None:intergenic
AAGGTAAAGAAGTTAATCGG+AGG 0.666069 8.1:-46043530 MS.gene34682:CDS
CAAACCATGGCAGAGACCAA+AGG 0.668045 8.1:-46045504 MS.gene34682:CDS
TTGCCATGTCGTTTGCACCG+AGG 0.669899 8.1:-46045872 MS.gene34682:CDS
TCTCGCTGTTTGATTCCATG+GGG 0.671713 8.1:-46045732 MS.gene34682:CDS
AAATTGGTTGATCATGAGGA+TGG 0.677273 8.1:-46043491 MS.gene34682:CDS
GAAATTGGGTTCCACCACCA+GGG 0.677362 8.1:+46046401 None:intergenic
ACCATGGCAGAGACCAAAGG+AGG 0.677739 8.1:-46045501 MS.gene34682:CDS
TCGGTATAACGAGCATCACA+AGG 0.677771 8.1:+46046676 None:intergenic
GATAGAGTTCTAAGGCCTGG+TGG 0.678122 8.1:-46045572 MS.gene34682:CDS
ATATCTTTGGAGCAGAAATG+TGG 0.695730 8.1:-46045895 MS.gene34682:CDS
CTCGGTGTGATATATGAGCG+AGG 0.696906 8.1:-46044609 MS.gene34682:CDS
CTATCAATGATGGGACAGTG+AGG 0.728235 8.1:-46046333 MS.gene34682:CDS
GCACGCCGTTGATCTTGACA+CGG 0.740888 8.1:+46046646 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATTATATAACAACAAAA+CGG + chr8.1:46045063-46045082 None:intergenic 10.0%
!!! TTTTTTCATATTTTTTATGA+TGG + chr8.1:46046182-46046201 None:intergenic 10.0%
!! AATATATAAGAAAAAAGAAC+AGG + chr8.1:46045849-46045868 None:intergenic 15.0%
!! TAATGTTGTATATAAATAAG+AGG - chr8.1:46045349-46045368 MS.gene34682:CDS 15.0%
!! TAATTATATAACAACAAAAC+GGG + chr8.1:46045062-46045081 None:intergenic 15.0%
!!! ACTATTTGACATTATAATTT+TGG - chr8.1:46044711-46044730 MS.gene34682:CDS 15.0%
!!! TGCACATTTTAATAAAAATT+AGG - chr8.1:46046290-46046309 MS.gene34682:intron 15.0%
!! AAAACAACATATAGCTTATA+TGG + chr8.1:46044202-46044221 None:intergenic 20.0%
!! AATTATATAACAACAAAACG+GGG + chr8.1:46045061-46045080 None:intergenic 20.0%
!! ATTAAGGTAAAGAAGTTAAT+CGG - chr8.1:46046810-46046829 MS.gene34682:CDS 20.0%
!! TGTGAATCAAAACTTAAATT+TGG + chr8.1:46043589-46043608 None:intergenic 20.0%
!!! GATTTTAATAGCCATTTTAT+CGG + chr8.1:46046456-46046475 None:intergenic 20.0%
! AAAACTATTAGCTGCAAATA+AGG - chr8.1:46044684-46044703 MS.gene34682:CDS 25.0%
! AATGAGATGGAATATGAAAT+TGG - chr8.1:46046836-46046855 MS.gene34682:CDS 25.0%
! AATGTATGTATTCATATGTC+AGG - chr8.1:46044409-46044428 MS.gene34682:CDS 25.0%
! AGATCTGACATGAATAAAAT+AGG + chr8.1:46045807-46045826 None:intergenic 25.0%
! ATTATATAACAACAAAACGG+GGG + chr8.1:46045060-46045079 None:intergenic 25.0%
! CAAGAAAATTAATTCACTGT+TGG - chr8.1:46045589-46045608 MS.gene34682:CDS 25.0%
! CTTTAGGTATAAGAAAATGA+AGG - chr8.1:46045403-46045422 MS.gene34682:CDS 25.0%
! TAAAAACATTTCCCTCATAT+TGG + chr8.1:46043918-46043937 None:intergenic 25.0%
! TAAAATAGGATGGAATAGTT+AGG + chr8.1:46045793-46045812 None:intergenic 25.0%
! TACCTATTACTTTGACTATT+CGG - chr8.1:46044367-46044386 MS.gene34682:intron 25.0%
! TATTCATTCATCTAAGTCAT+GGG - chr8.1:46045673-46045692 MS.gene34682:intron 25.0%
! TGAGAACTTAAAGAAATAAG+CGG - chr8.1:46044235-46044254 MS.gene34682:intron 25.0%
!! AAAAACAAGTTTTCTGCTAA+TGG + chr8.1:46046628-46046647 None:intergenic 25.0%
!! TTTTATGATGGCCATATTTA+GGG + chr8.1:46046170-46046189 None:intergenic 25.0%
!! TTTTTATGATGGCCATATTT+AGG + chr8.1:46046171-46046190 None:intergenic 25.0%
!!! ATAGTTCTAAATTGCAATTG+CGG - chr8.1:46045147-46045166 MS.gene34682:intron 25.0%
!!! CACACTTTTTTCTTCAATTT+TGG - chr8.1:46046322-46046341 MS.gene34682:CDS 25.0%
!!! CTCATTTTTCTGCAATATAA+AGG + chr8.1:46045184-46045203 None:intergenic 25.0%
!!! TGCTGTTTCTTCTATATATT+GGG - chr8.1:46043481-46043500 MS.gene34682:CDS 25.0%
!!! TTTTTGTTGCTTTTTTATCC+AGG - chr8.1:46045867-46045886 MS.gene34682:CDS 25.0%
AAAAGGAGATAGTATAGCAT+TGG - chr8.1:46043528-46043547 MS.gene34682:CDS 30.0%
AACATTATGGATATGAATGC+TGG - chr8.1:46045629-46045648 MS.gene34682:intron 30.0%
AACCGAATAGTCAAAGTAAT+AGG + chr8.1:46044372-46044391 None:intergenic 30.0%
AATTGCTGTCAAACAGTATT+GGG - chr8.1:46046899-46046918 MS.gene34682:CDS 30.0%
AGAACAAAGAAAGATTGAAG+AGG - chr8.1:46044875-46044894 MS.gene34682:CDS 30.0%
ATATATTTATCAGCACCTTG+AGG + chr8.1:46043967-46043986 None:intergenic 30.0%
ATCTTAAACCATTTCCAAAC+AGG - chr8.1:46045462-46045481 MS.gene34682:CDS 30.0%
ATTAAGCTGTTTAAGCAAAC+AGG + chr8.1:46044119-46044138 None:intergenic 30.0%
ATTAATTCACTGTTGGATTC+CGG - chr8.1:46045596-46045615 MS.gene34682:CDS 30.0%
CATTCATATCCATAATGTTG+CGG + chr8.1:46045628-46045647 None:intergenic 30.0%
CTATTCATTCATCTAAGTCA+TGG - chr8.1:46045672-46045691 MS.gene34682:intron 30.0%
CTGACATGAATAAAATAGGA+TGG + chr8.1:46045803-46045822 None:intergenic 30.0%
CTGTTATTCCTATCAATGAT+GGG - chr8.1:46044001-46044020 MS.gene34682:intron 30.0%
TAAAATAGTCATTTGACCGA+AGG + chr8.1:46045979-46045998 None:intergenic 30.0%
TAATTGCTGTCAAACAGTAT+TGG - chr8.1:46046898-46046917 MS.gene34682:CDS 30.0%
TATGAAATTGGTTGATCATG+AGG - chr8.1:46046848-46046867 MS.gene34682:CDS 30.0%
TATGATCTCATTCATGCTAA+TGG - chr8.1:46045920-46045939 MS.gene34682:intron 30.0%
TCTGTTATTCCTATCAATGA+TGG - chr8.1:46044000-46044019 MS.gene34682:intron 30.0%
TGAATGAGATCATATGTTCT+TGG + chr8.1:46045914-46045933 None:intergenic 30.0%
TTAAGCTGTTTAAGCAAACA+GGG + chr8.1:46044118-46044137 None:intergenic 30.0%
TTATATAACAACAAAACGGG+GGG + chr8.1:46045059-46045078 None:intergenic 30.0%
! ATTTGGAACTACATCACATT+CGG + chr8.1:46043572-46043591 None:intergenic 30.0%
! CTATAGTTCATGTTTTCTCT+CGG + chr8.1:46043733-46043752 None:intergenic 30.0%
! CTTTAAATGCTTTTGTTCTG+TGG - chr8.1:46045380-46045399 MS.gene34682:CDS 30.0%
! GATTCTTTTAGTCGTATACT+TGG + chr8.1:46045227-46045246 None:intergenic 30.0%
! GCTAATTTGAGTTTATCTAC+TGG + chr8.1:46044328-46044347 None:intergenic 30.0%
! TGCAGCTAATAGTTTTTACA+TGG + chr8.1:46044680-46044699 None:intergenic 30.0%
!! AAGTACAATTTGCTCTAGAA+AGG - chr8.1:46044510-46044529 MS.gene34682:intron 30.0%
!! AGTACAATTTGCTCTAGAAA+GGG - chr8.1:46044511-46044530 MS.gene34682:intron 30.0%
!! GTGCTGTTTCTTCTATATAT+TGG - chr8.1:46043480-46043499 MS.gene34682:CDS 30.0%
!! TGTAGGTTTTAACGTAAGAT+GGG + chr8.1:46046247-46046266 None:intergenic 30.0%
AAACACCTTAGTGTTCGAAT+TGG + chr8.1:46043644-46043663 None:intergenic 35.0%
AAATTAGCCACAATCCAAAC+TGG - chr8.1:46044340-46044359 MS.gene34682:intron 35.0%
AAATTGGTTGATCATGAGGA+TGG - chr8.1:46046852-46046871 MS.gene34682:CDS 35.0%
AACTTCACACAGTATTGCAT+TGG - chr8.1:46046055-46046074 MS.gene34682:intron 35.0%
AAGGTAAAGAAGTTAATCGG+AGG - chr8.1:46046813-46046832 MS.gene34682:CDS 35.0%
AATGCAATACTGTGTGAAGT+TGG + chr8.1:46046056-46046075 None:intergenic 35.0%
ACAGCAATTAGTACTTTCTC+AGG + chr8.1:46046888-46046907 None:intergenic 35.0%
ACCAGGATGATAACAAAATG+TGG - chr8.1:46045546-46045565 MS.gene34682:CDS 35.0%
ACTTCACACAGTATTGCATT+GGG - chr8.1:46046056-46046075 MS.gene34682:intron 35.0%
AGAAGGCTGAAATTGCAATT+TGG - chr8.1:46044931-46044950 MS.gene34682:CDS 35.0%
AGGATAAGTAAGTGTTCCTT+CGG - chr8.1:46045960-46045979 MS.gene34682:intron 35.0%
ATAGAACCACTAGAAACTCT+AGG + chr8.1:46045503-46045522 None:intergenic 35.0%
ATATATGAGCGAGGATTGAT+TGG - chr8.1:46045743-46045762 MS.gene34682:CDS 35.0%
ATGCAAAATCAAGACACAGT+TGG + chr8.1:46046604-46046623 None:intergenic 35.0%
CAGAATTGGATCCAATATGA+GGG - chr8.1:46043904-46043923 MS.gene34682:intron 35.0%
CGAAGTCGATGTGTTAATTA+AGG - chr8.1:46046794-46046813 MS.gene34682:CDS 35.0%
CTTATCATCGAGAATAGTGT+AGG + chr8.1:46046264-46046283 None:intergenic 35.0%
GACAAGTAGAGAGAACTAAA+AGG + chr8.1:46045104-46045123 None:intergenic 35.0%
GAGGTTTAACAAAACTGATC+AGG + chr8.1:46044090-46044109 None:intergenic 35.0%
GTGCAGATCTTTATAGTAGT+TGG - chr8.1:46043454-46043473 MS.gene34682:CDS 35.0%
GTTTGTAGACTCAACAAACA+AGG + chr8.1:46046093-46046112 None:intergenic 35.0%
TAAGCCAGTTCTTATTCTGT+AGG - chr8.1:46046021-46046040 MS.gene34682:intron 35.0%
TAGTTGACCTTCCAATTGAT+TGG + chr8.1:46044819-46044838 None:intergenic 35.0%
TATCCTGGTACAAACTAAAG+AGG + chr8.1:46045946-46045965 None:intergenic 35.0%
TCAGAATTGGATCCAATATG+AGG - chr8.1:46043903-46043922 MS.gene34682:intron 35.0%
TCCATTTCAGTCCCTAAATA+TGG - chr8.1:46046156-46046175 MS.gene34682:intron 35.0%
TCTTCTATATATTGGGAGCA+TGG - chr8.1:46043488-46043507 MS.gene34682:CDS 35.0%
TGAATCCAATTCGAACACTA+AGG - chr8.1:46043636-46043655 MS.gene34682:intron 35.0%
TGAGTCTACAAACTGTTACA+TGG - chr8.1:46046100-46046119 MS.gene34682:intron 35.0%
TGATTGGCATCTATCATGAT+TGG - chr8.1:46045759-46045778 MS.gene34682:CDS 35.0%
TGCAGATGGAATGTATATGA+TGG - chr8.1:46044743-46044762 MS.gene34682:CDS 35.0%
TGTAAGGTGCATTAGCATAA+GGG + chr8.1:46043858-46043877 None:intergenic 35.0%
TTCTTTCGAAGCCGATAAAA+TGG - chr8.1:46046442-46046461 MS.gene34682:CDS 35.0%
TTGAGAAGGCTATTCAGAAT+TGG - chr8.1:46043890-46043909 MS.gene34682:intron 35.0%
TTGTAAGGTGCATTAGCATA+AGG + chr8.1:46043859-46043878 None:intergenic 35.0%
! AAACAGTATTGGGTTACTGA+TGG - chr8.1:46046909-46046928 MS.gene34682:CDS 35.0%
! AGAGTAGTTCAAGTTTCTTC+TGG + chr8.1:46046219-46046238 None:intergenic 35.0%
! AGTAGTTCAAGTTTCTTCTG+GGG + chr8.1:46046217-46046236 None:intergenic 35.0%
! GAGTAGTTCAAGTTTCTTCT+GGG + chr8.1:46046218-46046237 None:intergenic 35.0%
! GTACTTTTCTCAGCTATAGT+AGG + chr8.1:46045713-46045732 None:intergenic 35.0%
! TATGGATATGAATGCTGGTT+TGG - chr8.1:46045634-46045653 MS.gene34682:intron 35.0%
!! ATATCTTTGGAGCAGAAATG+TGG - chr8.1:46044448-46044467 MS.gene34682:CDS 35.0%
!! ATGGATATGAATGCTGGTTT+GGG - chr8.1:46045635-46045654 MS.gene34682:intron 35.0%
!! GTACAATTTGCTCTAGAAAG+GGG - chr8.1:46044512-46044531 MS.gene34682:intron 35.0%
!! GTGTAGGTTTTAACGTAAGA+TGG + chr8.1:46046248-46046267 None:intergenic 35.0%
!! TCCACATTTTGTTATCATCC+TGG + chr8.1:46045550-46045569 None:intergenic 35.0%
!! TGATGGGTATGGCAATTTTA+TGG + chr8.1:46044567-46044586 None:intergenic 35.0%
!! TGGAAGTTGATAGAGTTCTA+AGG - chr8.1:46044763-46044782 MS.gene34682:CDS 35.0%
!!! AAAGGTGTTACATACCCTTT+TGG + chr8.1:46043808-46043827 None:intergenic 35.0%
!!! AATGTTTTTAGATTCCCTGG+TGG - chr8.1:46043928-46043947 MS.gene34682:intron 35.0%
!!! CAAAGAAGTGGTTTTGGAAA+AGG - chr8.1:46043511-46043530 MS.gene34682:CDS 35.0%
!!! GGAAATGTTTTTAGATTCCC+TGG - chr8.1:46043925-46043944 MS.gene34682:intron 35.0%
!!! TCAGTTTTGTTAAACCTCCT+TGG - chr8.1:46044092-46044111 MS.gene34682:intron 35.0%
ACATAAACATACCCCACAAC+CGG + chr8.1:46044049-46044068 None:intergenic 40.0%
AGAAGACATTCTTCTCGAGA+TGG - chr8.1:46046731-46046750 MS.gene34682:CDS 40.0%
AGGTTGCTAAGAAACTTTGC+TGG - chr8.1:46044895-46044914 MS.gene34682:CDS 40.0%
AGTACTTTCTCAGGAACAAG+AGG + chr8.1:46046879-46046898 None:intergenic 40.0%
AGTTAATCGGAGGAATGAGA+TGG - chr8.1:46046823-46046842 MS.gene34682:CDS 40.0%
ATCAGCACCTTGAGGAAATT+GGG + chr8.1:46043959-46043978 None:intergenic 40.0%
ATCTTGACACGGAGTGTAAT+CGG + chr8.1:46043689-46043708 None:intergenic 40.0%
CAATGTAACTTCTCTTCCTC+TGG + chr8.1:46043772-46043791 None:intergenic 40.0%
CATAATGTTGCGGTATCTTC+CGG + chr8.1:46045618-46045637 None:intergenic 40.0%
CCAAAAACACCAATAACAGC+AGG + chr8.1:46044542-46044561 None:intergenic 40.0%
GAAGGAACACTTACTTATCC+TGG + chr8.1:46045961-46045980 None:intergenic 40.0%
GCATATAGCCTGTTTGGAAA+TGG + chr8.1:46045473-46045492 None:intergenic 40.0%
GCCATATTTAGGGACTGAAA+TGG + chr8.1:46046160-46046179 None:intergenic 40.0%
GGATTCGCAAAATTCTACAC+TGG + chr8.1:46045003-46045022 None:intergenic 40.0%
GGCATCTATCATGATTGGTA+TGG - chr8.1:46045764-46045783 MS.gene34682:CDS 40.0%
GGTTGCTAAGAAACTTTGCT+GGG - chr8.1:46044896-46044915 MS.gene34682:CDS 40.0%
GTAATAGGTACAAGCCAGTT+TGG + chr8.1:46044357-46044376 None:intergenic 40.0%
TACGCCTACAGAATAAGAAC+TGG + chr8.1:46046028-46046047 None:intergenic 40.0%
TATCAGCACCTTGAGGAAAT+TGG + chr8.1:46043960-46043979 None:intergenic 40.0%
TATGTCTCAGAAGAAACTCC+AGG + chr8.1:46045527-46045546 None:intergenic 40.0%
TCAACTGTGAGACTCTTGTA+AGG + chr8.1:46043874-46043893 None:intergenic 40.0%
TTCTCGCTGTTTGATTCCAT+GGG - chr8.1:46044610-46044629 MS.gene34682:CDS 40.0%
TTGACCTTCCAATTGATTGG+AGG + chr8.1:46044816-46044835 None:intergenic 40.0%
TTGTCTGCTACGACATGATT+CGG + chr8.1:46044973-46044992 None:intergenic 40.0%
TTTGACTAACTTCACCAGCA+TGG + chr8.1:46043612-46043631 None:intergenic 40.0%
! AACCAAGTGCTGCTGATAAT+AGG - chr8.1:46043419-46043438 MS.gene34682:CDS 40.0%
! AACCACTAGAAACTCTAGGA+GGG + chr8.1:46045499-46045518 None:intergenic 40.0%
! ATAGCTGAGAAAAGTACGCT+CGG - chr8.1:46045716-46045735 MS.gene34682:intron 40.0%
! ATATGTCAGGTTGCAAGTTG+GGG - chr8.1:46044422-46044441 MS.gene34682:CDS 40.0%
! CATATGTCAGGTTGCAAGTT+GGG - chr8.1:46044421-46044440 MS.gene34682:CDS 40.0%
! GGTATGTAACACCTTTTCCA+TGG - chr8.1:46043812-46043831 MS.gene34682:intron 40.0%
! TCATATGTCAGGTTGCAAGT+TGG - chr8.1:46044420-46044439 MS.gene34682:CDS 40.0%
! TGCTTTTGTTCTGTGGCTTT+AGG - chr8.1:46045387-46045406 MS.gene34682:CDS 40.0%
! TTTCTGGTCCTCCAATCAAT+TGG - chr8.1:46044805-46044824 MS.gene34682:CDS 40.0%
! TTTTCCATGGCCTAAGAGTA+GGG - chr8.1:46043825-46043844 MS.gene34682:intron 40.0%
!! AGTTTCTTCTGAGACATACC+AGG - chr8.1:46045529-46045548 MS.gene34682:CDS 40.0%
!! CCTGCTGTTATTGGTGTTTT+TGG - chr8.1:46044539-46044558 MS.gene34682:intron 40.0%
!! GTTTCTAGTGGTTCTATTCC+TGG - chr8.1:46045506-46045525 MS.gene34682:CDS 40.0%
!! GTTTTAACGTAAGATGGGAG+AGG + chr8.1:46046242-46046261 None:intergenic 40.0%
!! TTAACACATCGACTTCGTCA+CGG + chr8.1:46046791-46046810 None:intergenic 40.0%
!! TTTGGCTGTTGATTTGCAGA+TGG - chr8.1:46044729-46044748 MS.gene34682:CDS 40.0%
!!! AGTTTTGATTCACACCATGC+TGG - chr8.1:46043595-46043614 MS.gene34682:CDS 40.0%
!!! GCTTTTTTATCCAGGTGTGA+AGG - chr8.1:46045875-46045894 MS.gene34682:CDS 40.0%
!!! TTACATACCCTTTTGGTGCT+GGG + chr8.1:46043801-46043820 None:intergenic 40.0%
AAATGGACACACTCAAGCAC+AGG + chr8.1:46046143-46046162 None:intergenic 45.0%
ACACTCCGTGTCAAGATCAA+CGG - chr8.1:46043692-46043711 MS.gene34682:intron 45.0%
ACATTCTTCTCGAGATGGAC+CGG - chr8.1:46046736-46046755 MS.gene34682:CDS 45.0%
ACTCCGACTCCTAAAGTTTC+TGG - chr8.1:46045434-46045453 MS.gene34682:CDS 45.0%
AGAACAATGAGCCATGTCGA+AGG + chr8.1:46044594-46044613 None:intergenic 45.0%
AGATCGCCACCAGAAACTTT+AGG + chr8.1:46045446-46045465 None:intergenic 45.0%
CAAGAGTCTCACAGTTGAGA+AGG - chr8.1:46043876-46043895 MS.gene34682:intron 45.0%
CATGCATACCAGACATCATC+AGG + chr8.1:46045032-46045051 None:intergenic 45.0%
CGGAAGATACCGCAACATTA+TGG - chr8.1:46045616-46045635 MS.gene34682:intron 45.0%
CTACTCTTAGGCCATGGAAA+AGG + chr8.1:46043826-46043845 None:intergenic 45.0%
CTCACTGTCCCATCATTGAT+AGG + chr8.1:46044012-46044031 None:intergenic 45.0%
GAACCACTAGAAACTCTAGG+AGG + chr8.1:46045500-46045519 None:intergenic 45.0%
GGAAGGTCAACTACAAACCA+TGG - chr8.1:46044826-46044845 MS.gene34682:CDS 45.0%
GTACAAGCCAGTTTGGATTG+TGG + chr8.1:46044350-46044369 None:intergenic 45.0%
GTATGATCCCAGCACCAAAA+GGG - chr8.1:46043791-46043810 MS.gene34682:intron 45.0%
GTCCTATTATCAGCAGCACT+TGG + chr8.1:46043424-46043443 None:intergenic 45.0%
GTTCTCGCTGTTTGATTCCA+TGG - chr8.1:46044609-46044628 MS.gene34682:CDS 45.0%
TAATCCCTACTCTTAGGCCA+TGG + chr8.1:46043832-46043851 None:intergenic 45.0%
TCGGTATAACGAGCATCACA+AGG + chr8.1:46043670-46043689 None:intergenic 45.0%
TCTCGCTGTTTGATTCCATG+GGG - chr8.1:46044611-46044630 MS.gene34682:CDS 45.0%
TGGTCCTCCAATCAATTGGA+AGG - chr8.1:46044809-46044828 MS.gene34682:CDS 45.0%
TGTAACTTCTCTTCCTCTGG+AGG + chr8.1:46043769-46043788 None:intergenic 45.0%
TGTAGAAAAGCCTTCACACC+TGG + chr8.1:46045888-46045907 None:intergenic 45.0%
TGTATGATCCCAGCACCAAA+AGG - chr8.1:46043790-46043809 MS.gene34682:intron 45.0%
TGTTTAAGCAAACAGGGCCA+AGG + chr8.1:46044112-46044131 None:intergenic 45.0%
TTCTTACCATTTGCTCCCCA+TGG + chr8.1:46044629-46044648 None:intergenic 45.0%
TTGATTCCATGGGGAGCAAA+TGG - chr8.1:46044620-46044639 MS.gene34682:CDS 45.0%
! ATCCCTCCTAGAGTTTCTAG+TGG - chr8.1:46045494-46045513 MS.gene34682:CDS 45.0%
! CAAGTTGGGGTGCATATCTT+TGG - chr8.1:46044435-46044454 MS.gene34682:CDS 45.0%
! CCACCAGAAACTTTAGGAGT+CGG + chr8.1:46045440-46045459 None:intergenic 45.0%
! CTATCAATGATGGGACAGTG+AGG - chr8.1:46044010-46044029 MS.gene34682:intron 45.0%
! CTTTTCCATGGCCTAAGAGT+AGG - chr8.1:46043824-46043843 MS.gene34682:intron 45.0%
! GCATGGCAAAGAAGTGGTTT+TGG - chr8.1:46043505-46043524 MS.gene34682:CDS 45.0%
! TCTAAGGCCTGGTGGTTATT+GGG - chr8.1:46044779-46044798 MS.gene34682:CDS 45.0%
!! GTTACATACCCTTTTGGTGC+TGG + chr8.1:46043802-46043821 None:intergenic 45.0%
!! GTTGATAGAGTTCTAAGGCC+TGG - chr8.1:46044768-46044787 MS.gene34682:CDS 45.0%
!! GTTTTTAGATTCCCTGGTGG+TGG - chr8.1:46043931-46043950 MS.gene34682:intron 45.0%
!! TGGCCTCTTTAGTTTGTACC+AGG - chr8.1:46045940-46045959 MS.gene34682:intron 45.0%
!! TTCAAGTTTCTTCTGGGGCA+GGG + chr8.1:46046212-46046231 None:intergenic 45.0%
!! TTCTAAGGCCTGGTGGTTAT+TGG - chr8.1:46044778-46044797 MS.gene34682:CDS 45.0%
ACGCACTTGCGAGACTGTTT+GGG + chr8.1:46044302-46044321 None:intergenic 50.0%
AGACTGTTTGGGAGAGCTTG+TGG + chr8.1:46044291-46044310 None:intergenic 50.0%
AGAGAGACATTGTCCTCCAG+AGG - chr8.1:46043753-46043772 MS.gene34682:intron 50.0%
CAAACCATGGCAGAGACCAA+AGG - chr8.1:46044839-46044858 MS.gene34682:CDS 50.0%
CCAGACATCATCAGGATCTG+AGG + chr8.1:46045024-46045043 None:intergenic 50.0%
CCATGTCGAAGGCTCTTGAT+GGG + chr8.1:46044583-46044602 None:intergenic 50.0%
CTGGGAGAAGAAGTCTGAGA+AGG - chr8.1:46044914-46044933 MS.gene34682:CDS 50.0%
GAAATTGGGTTCCACCACCA+GGG + chr8.1:46043945-46043964 None:intergenic 50.0%
GGGACGTAATCCCTACTCTT+AGG + chr8.1:46043838-46043857 None:intergenic 50.0%
GGGATCGCATATAGCCTGTT+TGG + chr8.1:46045479-46045498 None:intergenic 50.0%
GGTGGAACCCAATTTCCTCA+AGG - chr8.1:46043949-46043968 MS.gene34682:intron 50.0%
GGTGGTTATTGGGTGCTTTC+TGG - chr8.1:46044789-46044808 MS.gene34682:CDS 50.0%
TACGCACTTGCGAGACTGTT+TGG + chr8.1:46044303-46044322 None:intergenic 50.0%
TCTTCCTCGAGTTCCTCCTT+TGG + chr8.1:46044858-46044877 None:intergenic 50.0%
TTAAGCAAACAGGGCCAAGG+AGG + chr8.1:46044109-46044128 None:intergenic 50.0%
! AGGGGTGTACCTGCTGTTAT+TGG - chr8.1:46044530-46044549 MS.gene34682:intron 50.0%
! CAATGATGGGACAGTGAGGA+CGG - chr8.1:46044014-46044033 MS.gene34682:intron 50.0%
! CCGACTCCTAAAGTTTCTGG+TGG - chr8.1:46045437-46045456 MS.gene34682:CDS 50.0%
! CCTCAGATCCTGATGATGTC+TGG - chr8.1:46045021-46045040 MS.gene34682:intron 50.0%
! CTCGGTGTGATATATGAGCG+AGG - chr8.1:46045734-46045753 MS.gene34682:CDS 50.0%
! TCGAAGGCTCTTGATGGGTA+TGG + chr8.1:46044578-46044597 None:intergenic 50.0%
! TTGGGAGCATGGCAAAGAAG+TGG - chr8.1:46043499-46043518 MS.gene34682:CDS 50.0%
!! GAAAGCACCCAATAACCACC+AGG + chr8.1:46044789-46044808 None:intergenic 50.0%
!! GATAGAGTTCTAAGGCCTGG+TGG - chr8.1:46044771-46044790 MS.gene34682:CDS 50.0%
!! GTTCAAGTTTCTTCTGGGGC+AGG + chr8.1:46046213-46046232 None:intergenic 50.0%
ACCATGGCAGAGACCAAAGG+AGG - chr8.1:46044842-46044861 MS.gene34682:CDS 55.0%
CCCATCAAGAGCCTTCGACA+TGG - chr8.1:46044580-46044599 MS.gene34682:intron 55.0%
CGCCTTCTGGTCGCAATATC+CGG + chr8.1:46046758-46046777 None:intergenic 55.0%
CGGATTATGACAGCGCCTTC+TGG + chr8.1:46046771-46046790 None:intergenic 55.0%
GACCGGATATTGCGACCAGA+AGG - chr8.1:46046753-46046772 MS.gene34682:CDS 55.0%
GAGACCAAAGGAGGAACTCG+AGG - chr8.1:46044851-46044870 MS.gene34682:CDS 55.0%
GCACGCCGTTGATCTTGACA+CGG + chr8.1:46043700-46043719 None:intergenic 55.0%
GCCATGTCGAAGGCTCTTGA+TGG + chr8.1:46044584-46044603 None:intergenic 55.0%
GGAAATTGGGTTCCACCACC+AGG + chr8.1:46043946-46043965 None:intergenic 55.0%
TCCTCCTTTGGTCTCTGCCA+TGG + chr8.1:46044846-46044865 None:intergenic 55.0%
TGTGCTTCGTGAGAGTCCCT+CGG + chr8.1:46044491-46044510 None:intergenic 55.0%
! TGCCATGTCGTTTGCACCGA+GGG - chr8.1:46044472-46044491 MS.gene34682:intron 55.0%
! TTGCCATGTCGTTTGCACCG+AGG - chr8.1:46044471-46044490 MS.gene34682:intron 55.0%
! GTCCCTCGGTGCAAACGACA+TGG + chr8.1:46044477-46044496 None:intergenic 60.0%
GTGAGGACGGCACTCGACAC+CGG - chr8.1:46044027-46044046 MS.gene34682:intron 65.0%
! ACGGCACTCGACACCGGTTG+TGG - chr8.1:46044033-46044052 MS.gene34682:intron 65.0%
! CGGCACTCGACACCGGTTGT+GGG - chr8.1:46044034-46044053 MS.gene34682:intron 65.0%
! GGCACTCGACACCGGTTGTG+GGG - chr8.1:46044035-46044054 MS.gene34682:intron 65.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 46043412 46046953 46043412 ID=MS.gene34682
chr8.1 mRNA 46043412 46046953 46043412 ID=MS.gene34682.t1;Parent=MS.gene34682
chr8.1 exon 46046309 46046953 46046309 ID=MS.gene34682.t1.exon1;Parent=MS.gene34682.t1
chr8.1 CDS 46046309 46046953 46046309 ID=cds.MS.gene34682.t1;Parent=MS.gene34682.t1
chr8.1 exon 46045724 46045934 46045724 ID=MS.gene34682.t1.exon2;Parent=MS.gene34682.t1
chr8.1 CDS 46045724 46045934 46045724 ID=cds.MS.gene34682.t1;Parent=MS.gene34682.t1
chr8.1 exon 46045323 46045617 46045323 ID=MS.gene34682.t1.exon3;Parent=MS.gene34682.t1
chr8.1 CDS 46045323 46045617 46045323 ID=cds.MS.gene34682.t1;Parent=MS.gene34682.t1
chr8.1 exon 46044585 46044956 46044585 ID=MS.gene34682.t1.exon4;Parent=MS.gene34682.t1
chr8.1 CDS 46044585 46044956 46044585 ID=cds.MS.gene34682.t1;Parent=MS.gene34682.t1
chr8.1 exon 46044399 46044476 46044399 ID=MS.gene34682.t1.exon5;Parent=MS.gene34682.t1
chr8.1 CDS 46044399 46044476 46044399 ID=cds.MS.gene34682.t1;Parent=MS.gene34682.t1
chr8.1 exon 46043412 46043643 46043412 ID=MS.gene34682.t1.exon6;Parent=MS.gene34682.t1
chr8.1 CDS 46043412 46043643 46043412 ID=cds.MS.gene34682.t1;Parent=MS.gene34682.t1
Gene Sequence

>MS.gene34682

ATGGCAAAACCAAGTGCTGCTGATAATAGGACTAGAAGTTCAGTGCAGATCTTTATAGTAGTTGGTTTGTGCTGTTTCTTCTATATATTGGGAGCATGGCAAAGAAGTGGTTTTGGAAAAGGAGATAGTATAGCATTGGAGATTACAAAGAATAACGCCGAATGTGATGTAGTTCCAAATTTAAGTTTTGATTCACACCATGCTGGTGAAGTTAGTCAAATCGATGAATCCAATTCGAACACTAAGGTGTTTAAACCTTGTGATGCTCGTTATACCGATTACACTCCGTGTCAAGATCAACGGCGTGCTATGACGTTTCCGAGAGAAAACATGAACTATAGAGAGAGACATTGTCCTCCAGAGGAAGAGAAGTTACATTGTATGATCCCAGCACCAAAAGGGTATGTAACACCTTTTCCATGGCCTAAGAGTAGGGATTACGTCCCTTATGCTAATGCACCTTACAAGAGTCTCACAGTTGAGAAGGCTATTCAGAATTGGATCCAATATGAGGGAAATGTTTTTAGATTCCCTGGTGGTGGAACCCAATTTCCTCAAGGTGCTGATAAATATATTGATCAACTCGCATCTGTTATTCCTATCAATGATGGGACAGTGAGGACGGCACTCGACACCGGTTGTGGGGTATGTTTATGTTTTTATTTATCTCAAATTCCTGATCAGTTTTGTTAAACCTCCTTGGCCCTGTTTGCTTAAACAGCTTAATTGATTACTTATAGTATAAGCTATTTTTGTTACAAAGATAAAATATTGTCAAAATGTTTTTCCATATAAGCTATATGTTGTTTTTACAAGCTATCGTTGAGAACTTAAAGAAATAAGCGGAAAACAACTTATGTATATCATAAACTGTTTCCACAAGCTCTCCCAAACAGTCTCGCAAGTGCGTATGCCAGTAGATAAACTCAAATTAGCCACAATCCAAACTGGCTTGTACCTATTACTTTGACTATTCGGTTCATTATTTGTATTAAGTAATGTATGTATTCATATGTCAGGTTGCAAGTTGGGGTGCATATCTTTGGAGCAGAAATGTGGTTGCCATGTCGTTTGCACCGAGGGACTCTCACGAAGCACAAGTACAATTTGCTCTAGAAAGGGGTGTACCTGCTGTTATTGGTGTTTTTGGAACCATAAAATTGCCATACCCATCAAGAGCCTTCGACATGGCTCATTGTTCTCGCTGTTTGATTCCATGGGGAGCAAATGGTAAGAACATCACAGTTAAAGTAAACAATGTTTTACCATGTAAAAACTATTAGCTGCAAATAAGGAAGCACTATTTGACATTATAATTTTGGCTGTTGATTTGCAGATGGAATGTATATGATGGAAGTTGATAGAGTTCTAAGGCCTGGTGGTTATTGGGTGCTTTCTGGTCCTCCAATCAATTGGAAGGTCAACTACAAACCATGGCAGAGACCAAAGGAGGAACTCGAGGAAGAACAAAGAAAGATTGAAGAGGTTGCTAAGAAACTTTGCTGGGAGAAGAAGTCTGAGAAGGCTGAAATTGCAATTTGGCAAAAGATGACAGACACCGAATCATGTCGTAGCAGACAAGATGACTCCAGTGTAGAATTTTGCGAATCCTCAGATCCTGATGATGTCTGGTATGCATGCTTACCCCCCGTTTTGTTGTTATATAATTAATATTTGTTTATCAATGTTCCTTTTAGTTCTCTCTACTTGTCATGAGAACATACATGTGTGTGATATAGTTCTAAATTGCAATTGCGGTTAAACTCAAACCTTTATATTGCAGAAAAATGAGACAATTTTAAAATCATGCATCCAAGTATACGACTAAAAGAATCTGATATTCTCTAGTAATGTATTAGATATTGACACTTGTTGTATTGTATATGTTATTGATATCGTCTCTATTGATTTTTAATTGTATAAATATGAGCAATGTTTAATGTTGTATATAAATAAGAGGTGCACTGACTTTAAATGCTTTTGTTCTGTGGCTTTAGGTATAAGAAAATGAAGGCATGCGTTACTCCGACTCCTAAAGTTTCTGGTGGCGATCTTAAACCATTTCCAAACAGGCTATATGCGATCCCTCCTAGAGTTTCTAGTGGTTCTATTCCTGGAGTTTCTTCTGAGACATACCAGGATGATAACAAAATGTGGAAAAAGCATGTCAATGCATACAAGAAAATTAATTCACTGTTGGATTCCGGAAGATACCGCAACATTATGGATATGAATGCTGGTTTGGGTAGTTTTGCTGCTGCTATTCATTCATCTAAGTCATGGGTCATGAATGTTGTGCCTACTATAGCTGAGAAAAGTACGCTCGGTGTGATATATGAGCGAGGATTGATTGGCATCTATCATGATTGGTATGGTTTCCTAACTATTCCATCCTATTTTATTCATGTCAGATCTCGATCTTTAACTATTCGATCCTGTTCTTTTTTCTTATATATTTTTGTTGCTTTTTTATCCAGGTGTGAAGGCTTTTCTACATATCCAAGAACATATGATCTCATTCATGCTAATGGCCTCTTTAGTTTGTACCAGGATAAGTAAGTGTTCCTTCGGTCAAATGACTATTTTACTATTCGTCTTGTTAAGTTTTATAAGCCAGTTCTTATTCTGTAGGCGTAGACAACCAACTTCACACAGTATTGCATTGGGATCTGTAGTGACCTTGTTTGTTGAGTCTACAAACTGTTACATGGTTAAAAAGCACTTTTTACCTGTGCTTGAGTGTGTCCATTTCAGTCCCTAAATATGGCCATCATAAAAAATATGAAAAAATTACACTCCCTGCCCCAGAAGAAACTTGAACTACTCTCCTCTCCCATCTTACGTTAAAACCTACACTATTCTCGATGATAAGTGAATATGCACATTTTAATAAAAATTAGGATTCTTATGCACACTTTTTTCTTCAATTTTGGCTCTTATTATCTTTTACATATAGTTTTGAAATCTTACTAGTATCAATGTTAATTTATATCAACATAAAACAATAAAGATAAACTAAAGTTCTGAGCATTCTTTCGAAGCCGATAAAATGGCTATTAAAATCTTCATTTCATCTTCTAAAGTCATACAAACAATAATGTGTTCAAAATTTGTTAACAATGATATTGAAAATAAAAAATAACAGCTTTTGCATTTGTTACTCTTTTTATTTTTTGTTTAATTAAGCATCCAACTGTGTCTTGATTTTGCATGCCATTAGCAGAAAACTTGTTTTTAGTTTCGTGAGTTATCTTTTATAGCTGTGTTCTTTCATGTGACTCAAGCATGTCTATGATGTAATTGAACGCAGATGCAATACAGAAGACATTCTTCTCGAGATGGACCGGATATTGCGACCAGAAGGCGCTGTCATAATCCGTGACGAAGTCGATGTGTTAATTAAGGTAAAGAAGTTAATCGGAGGAATGAGATGGAATATGAAATTGGTTGATCATGAGGATGGTCCTCTTGTTCCTGAGAAAGTACTAATTGCTGTCAAACAGTATTGGGTTACTGATGGAAATTCCACATCAACACAATAA
Protein sequence

>MS.gene34682.t1

MAKPSAADNRTRSSVQIFIVVGLCCFFYILGAWQRSGFGKGDSIALEITKNNAECDVVPNLSFDSHHAGEVSQIDESNSNTKVFKPCDARYTDYTPCQDQRRAMTFPRENMNYRERHCPPEEEKLHCMIPAPKGYVTPFPWPKSRDYVPYANAPYKSLTVEKAIQNWIQYEGNVFRFPGGGTQFPQGADKYIDQLASVIPINDGTVRTALDTGCGVASWGAYLWSRNVVAMSFAPRDSHEAQVQFALERGVPAVIGVFGTIKLPYPSRAFDMAHCSRCLIPWGANDGMYMMEVDRVLRPGGYWVLSGPPINWKVNYKPWQRPKEELEEEQRKIEEVAKKLCWEKKSEKAEIAIWQKMTDTESCRSRQDDSSVEFCESSDPDDVWYKKMKACVTPTPKVSGGDLKPFPNRLYAIPPRVSSGSIPGVSSETYQDDNKMWKKHVNAYKKINSLLDSGRYRNIMDMNAGLGSFAAAIHSSKSWVMNVVPTIAEKSTLGVIYERGLIGIYHDWCEGFSTYPRTYDLIHANGLFSLYQDKCNTEDILLEMDRILRPEGAVIIRDEVDVLIKVKKLIGGMRWNMKLVDHEDGPLVPEKVLIAVKQYWVTDGNSTSTQ