AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34892

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34892.t1 MTR_8g079492 98.694 919 7 1 1 919 1 914 0.0 1863
MS.gene34892.t1 MTR_8g079492 98.587 920 7 2 1 919 1 915 0.0 1859
MS.gene34892.t1 MTR_8g079492 98.566 837 7 1 83 919 1 832 0.0 1692
MS.gene34892.t1 MTR_2g018690 78.373 934 161 11 1 919 1 908 0.0 1396
MS.gene34892.t1 MTR_5g076270 56.210 934 301 21 1 919 1 841 0.0 918
MS.gene34892.t1 MTR_3g064050 56.446 923 289 24 17 919 20 849 0.0 886
MS.gene34892.t1 MTR_4g124900 61.053 475 165 12 1 467 1 463 3.24e-173 532
MS.gene34892.t1 MTR_4g124900 45.509 167 77 4 723 878 899 1062 6.61e-33 138
MS.gene34892.t1 MTR_4g124900 61.053 475 165 12 1 467 1 463 4.31e-173 533
MS.gene34892.t1 MTR_4g124900 45.509 167 77 4 723 878 922 1085 6.65e-33 138
MS.gene34892.t1 MTR_2g043250 59.267 491 172 13 1 472 1 482 6.75e-167 516
MS.gene34892.t1 MTR_2g043250 43.407 182 84 5 710 878 903 1078 3.29e-32 135
MS.gene34892.t1 MTR_3g064050 47.301 704 261 21 234 919 1 612 5.88e-165 495
MS.gene34892.t1 MTR_8g101360 54.122 558 231 10 5 540 10 564 1.79e-161 501
MS.gene34892.t1 MTR_8g101360 66.667 93 31 0 786 878 984 1076 1.94e-34 143
MS.gene34892.t1 MTR_1g024025 66.757 367 117 4 15 379 35 398 1.17e-157 496
MS.gene34892.t1 MTR_1g024025 50.806 124 61 0 768 891 736 859 7.10e-31 131
MS.gene34892.t1 MTR_1g024025 65.116 86 27 1 215 300 861 943 2.41e-19 94.4
MS.gene34892.t1 MTR_1g024025 38.710 124 57 1 768 891 1160 1264 2.29e-16 84.7
MS.gene34892.t1 MTR_2g005240 54.795 365 161 3 19 382 19 380 5.49e-127 399
MS.gene34892.t1 MTR_2g005240 36.957 92 56 2 784 874 545 635 1.90e-13 74.7
MS.gene34892.t1 MTR_8g100050 52.055 365 172 3 19 382 55 417 1.46e-124 394
MS.gene34892.t1 MTR_8g100050 52.055 365 172 3 19 382 55 417 8.86e-124 395
MS.gene34892.t1 MTR_8g100050 43.434 99 54 2 786 883 710 807 9.55e-17 85.9
MS.gene34892.t1 MTR_8g027440 53.488 344 154 4 20 362 26 364 1.89e-116 371
MS.gene34892.t1 MTR_8g027440 32.653 196 96 7 702 874 463 645 2.18e-16 84.3
MS.gene34892.t1 MTR_2g093740 50.689 363 166 5 23 374 56 416 7.07e-115 367
MS.gene34892.t1 MTR_2g093740 50.689 363 166 5 23 374 56 416 2.77e-114 367
MS.gene34892.t1 MTR_2g093740 40.206 97 55 3 758 853 655 749 2.47e-15 80.9
MS.gene34892.t1 MTR_2g093740 50.689 363 166 5 23 374 56 416 9.45e-114 368
MS.gene34892.t1 MTR_2g093740 39.831 118 68 3 758 874 655 770 1.30e-19 95.1
MS.gene34892.t1 MTR_2g093740 48.936 376 166 6 23 374 56 429 4.71e-111 358
MS.gene34892.t1 MTR_4g021580 52.210 362 162 7 21 377 17 372 8.36e-111 354
MS.gene34892.t1 MTR_4g021580 52.210 362 162 7 21 377 17 372 1.39e-110 355
MS.gene34892.t1 MTR_4g021580 39.560 91 52 2 785 874 554 642 6.38e-14 76.3
MS.gene34892.t1 MTR_2g093740 48.936 376 166 6 23 374 56 429 2.61e-110 357
MS.gene34892.t1 MTR_2g093740 40.206 97 55 3 758 853 668 762 2.78e-15 80.9
MS.gene34892.t1 MTR_2g093740 48.936 376 166 6 23 374 56 429 4.35e-110 358
MS.gene34892.t1 MTR_2g093740 39.831 118 68 3 758 874 668 783 1.35e-19 95.1
MS.gene34892.t1 MTR_7g062540 48.806 377 176 8 15 383 6 373 2.04e-109 352
MS.gene34892.t1 MTR_7g062540 38.710 93 54 2 785 876 569 659 1.76e-14 78.2
MS.gene34892.t1 MTR_4g060460 49.589 365 169 6 23 375 54 415 1.81e-108 353
MS.gene34892.t1 MTR_4g060460 41.489 94 53 2 782 874 659 751 1.31e-17 88.6
MS.gene34892.t1 MTR_4g060460 49.589 365 169 6 23 375 54 415 1.90e-108 353
MS.gene34892.t1 MTR_4g060460 41.489 94 53 2 782 874 654 746 1.35e-17 88.6
MS.gene34892.t1 MTR_2g014770 48.485 363 169 5 4 357 35 388 2.74e-107 345
MS.gene34892.t1 MTR_2g014770 48.485 363 169 5 4 357 35 388 2.12e-106 345
MS.gene34892.t1 MTR_4g088210 46.825 378 169 7 23 382 38 401 1.79e-104 340
MS.gene34892.t1 MTR_4g088210 46.825 378 169 7 23 382 38 401 3.06e-104 340
MS.gene34892.t1 MTR_2g093740 54.297 256 115 2 120 374 32 286 1.41e-88 295
MS.gene34892.t1 MTR_2g093740 40.206 97 55 3 758 853 525 619 2.54e-15 80.9
MS.gene34892.t1 MTR_2g093740 54.297 256 115 2 120 374 32 286 2.97e-88 296
MS.gene34892.t1 MTR_2g093740 39.831 118 68 3 758 874 525 640 9.22e-20 95.1
MS.gene34892.t1 MTR_2g093740 51.673 269 115 3 120 374 32 299 9.90e-85 285
MS.gene34892.t1 MTR_2g093740 40.206 97 55 3 758 853 538 632 2.79e-15 80.5
MS.gene34892.t1 MTR_2g093740 51.673 269 115 3 120 374 32 299 1.98e-84 286
MS.gene34892.t1 MTR_2g093740 39.831 118 68 3 758 874 538 653 1.20e-19 94.7
MS.gene34892.t1 MTR_4g058930 39.150 447 204 11 13 402 2 437 9.12e-84 283
MS.gene34892.t1 MTR_4g058930 39.150 447 204 11 13 402 2 437 1.73e-83 283
MS.gene34892.t1 MTR_2g094570 39.558 407 197 9 17 381 5 404 1.54e-82 280
MS.gene34892.t1 MTR_2g094570 38.592 412 204 8 12 381 56 460 2.78e-82 281
MS.gene34892.t1 MTR_2g094570 38.821 407 200 8 17 381 5 404 3.35e-82 280
MS.gene34892.t1 MTR_1g094960 38.049 410 209 8 13 384 9 411 1.91e-79 270
MS.gene34892.t1 MTR_1g064430 36.160 401 204 6 14 368 18 412 7.51e-73 254
MS.gene34892.t1 MTR_1g064430 36.160 401 204 6 14 368 31 425 7.84e-73 254
MS.gene34892.t1 MTR_3g073420 36.683 398 211 6 11 374 7 397 4.83e-69 241
MS.gene34892.t1 MTR_8g446900 38.415 328 185 7 65 383 3 322 2.65e-65 224
MS.gene34892.t1 MTR_7g101280 35.012 417 212 12 18 383 26 434 5.67e-64 228
MS.gene34892.t1 MTR_0041s0110 35.012 417 212 12 18 383 26 434 5.67e-64 228
MS.gene34892.t1 MTR_5g061220 34.684 395 209 11 10 375 11 385 4.50e-58 208
MS.gene34892.t1 MTR_5g040880 33.071 381 233 9 16 391 4 367 2.12e-57 206
MS.gene34892.t1 MTR_5g074840 59.259 189 42 3 104 288 5 162 1.29e-55 189
MS.gene34892.t1 MTR_7g101275 36.513 304 183 6 32 332 1 297 6.23e-55 196
MS.gene34892.t1 MTR_5g082140 35.813 363 212 10 12 369 3 349 1.53e-54 197
MS.gene34892.t1 MTR_1g058210 33.602 372 221 12 11 375 3 355 6.99e-52 189
MS.gene34892.t1 MTR_0041s0120 35.202 321 176 10 32 332 1 309 2.76e-49 180
MS.gene34892.t1 MTR_2g024430 33.699 365 200 14 11 362 11 346 3.71e-48 180
MS.gene34892.t1 MTR_2g006270 32.386 352 217 8 23 369 13 348 6.98e-46 172
MS.gene34892.t1 MTR_5g040740 31.858 339 176 12 20 336 9 314 6.80e-42 159
MS.gene34892.t1 MTR_2g006380 31.461 356 208 12 23 369 20 348 2.95e-41 158
MS.gene34892.t1 MTR_5g060630 27.415 383 231 8 18 367 7 375 1.78e-36 145
MS.gene34892.t1 MTR_5g460740 27.415 383 231 8 18 367 7 375 1.78e-36 145
MS.gene34892.t1 MTR_5g062970 36.098 205 124 3 20 222 35 234 5.43e-34 131
MS.gene34892.t1 MTR_5g060780 29.107 347 216 12 20 356 9 335 5.83e-33 132
MS.gene34892.t1 MTR_5g460920 29.395 347 215 12 20 356 9 335 7.44e-33 132
MS.gene34892.t1 MTR_5g061890 28.814 354 208 12 20 356 9 335 7.80e-32 129
MS.gene34892.t1 MTR_5g032260 42.623 122 66 1 234 355 37 154 2.10e-25 110
MS.gene34892.t1 MTR_2g078580 58.571 70 9 1 104 173 5 54 1.05e-14 75.1
MS.gene34892.t1 MTR_5g060770 25.564 266 140 9 76 337 9 220 1.07e-12 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34892.t1 AT1G30330 84.156 486 68 5 1 482 1 481 0.0 825
MS.gene34892.t1 AT1G30330 83.811 488 68 6 1 482 1 483 0.0 820
MS.gene34892.t1 AT1G30330 83.811 488 68 6 1 482 1 483 0.0 820
MS.gene34892.t1 AT1G19850 41.522 920 439 26 13 894 32 890 0.0 587
MS.gene34892.t1 AT1G19850 41.522 920 439 26 13 894 43 901 0.0 587
MS.gene34892.t1 AT1G19220 57.853 503 193 12 1 494 1 493 5.40e-170 524
MS.gene34892.t1 AT1G19220 43.939 198 77 7 711 878 857 1050 1.53e-32 137
MS.gene34892.t1 AT5G20730 59.711 484 156 16 4 467 5 469 1.02e-162 507
MS.gene34892.t1 AT5G20730 61.290 93 36 0 786 878 1037 1129 7.25e-30 128
MS.gene34892.t1 AT5G20730 59.588 485 156 17 4 467 5 470 6.55e-161 502
MS.gene34892.t1 AT5G20730 61.290 93 36 0 786 878 1038 1130 7.75e-30 128
MS.gene34892.t1 AT5G20730 59.588 485 156 17 4 467 5 470 9.10e-161 502
MS.gene34892.t1 AT5G20730 61.290 93 36 0 786 878 1038 1130 8.26e-30 128
MS.gene34892.t1 AT5G62000 50.754 398 169 6 3 375 17 412 2.45e-125 400
MS.gene34892.t1 AT5G62000 40.566 106 61 2 775 879 722 826 3.82e-17 87.0
MS.gene34892.t1 AT5G62000 50.754 398 169 6 3 375 17 412 2.45e-125 400
MS.gene34892.t1 AT5G62000 40.566 106 61 2 775 879 722 826 3.82e-17 87.0
MS.gene34892.t1 AT5G62000 50.754 398 169 6 3 375 17 412 2.45e-125 400
MS.gene34892.t1 AT5G62000 40.566 106 61 2 775 879 722 826 3.82e-17 87.0
MS.gene34892.t1 AT5G62000 50.754 398 169 6 3 375 17 412 2.45e-125 400
MS.gene34892.t1 AT5G62000 40.566 106 61 2 775 879 722 826 3.82e-17 87.0
MS.gene34892.t1 AT5G62000 50.754 398 169 6 3 375 17 412 4.50e-125 399
MS.gene34892.t1 AT5G62000 41.584 101 57 2 775 874 722 821 4.67e-17 86.7
MS.gene34892.t1 AT1G59750 53.261 368 164 5 19 382 18 381 1.63e-122 387
MS.gene34892.t1 AT1G59750 38.043 92 55 2 784 874 535 625 1.40e-13 75.5
MS.gene34892.t1 AT1G59750 53.261 368 164 5 19 382 18 381 1.76e-122 386
MS.gene34892.t1 AT1G59750 38.043 92 55 2 784 874 537 627 1.45e-13 75.1
MS.gene34892.t1 AT1G59750 53.261 368 164 5 19 382 18 381 1.98e-122 386
MS.gene34892.t1 AT1G59750 38.043 92 55 2 784 874 540 630 1.37e-13 75.5
MS.gene34892.t1 AT1G59750 53.261 368 164 5 19 382 18 381 1.98e-122 386
MS.gene34892.t1 AT1G59750 38.043 92 55 2 784 874 540 630 1.37e-13 75.5
MS.gene34892.t1 AT5G60450 51.295 386 166 7 14 381 32 413 7.47e-121 385
MS.gene34892.t1 AT5G60450 35.075 134 81 4 756 885 609 740 4.37e-18 90.1
MS.gene34892.t1 AT5G60450 52.116 378 159 7 22 381 64 437 2.11e-120 385
MS.gene34892.t1 AT5G60450 35.075 134 81 4 756 885 633 764 5.17e-18 89.7
MS.gene34892.t1 AT3G61830 54.046 346 152 6 20 363 22 362 7.67e-117 370
MS.gene34892.t1 AT3G61830 34.783 115 63 2 796 910 500 602 7.31e-12 69.7
MS.gene34892.t1 AT2G46530 53.714 350 154 6 20 367 18 361 2.23e-116 369
MS.gene34892.t1 AT2G46530 29.101 189 104 6 694 879 421 582 2.11e-12 71.2
MS.gene34892.t1 AT2G46530 52.033 369 166 7 1 367 23 382 2.26e-116 369
MS.gene34892.t1 AT2G46530 29.101 189 104 6 694 879 442 603 2.48e-12 71.2
MS.gene34892.t1 AT2G33860 46.615 384 182 6 23 391 54 429 1.45e-107 345
MS.gene34892.t1 AT4G23980 51.111 360 165 6 20 375 9 361 2.28e-106 343
MS.gene34892.t1 AT4G23980 32.000 175 96 5 707 874 452 610 6.19e-14 76.3
MS.gene34892.t1 AT4G23980 51.111 360 165 6 20 375 9 361 2.64e-106 343
MS.gene34892.t1 AT4G23980 32.000 175 96 5 707 874 450 608 6.61e-14 76.3
MS.gene34892.t1 AT3G61830 53.333 315 140 6 51 363 2 311 6.69e-102 328
MS.gene34892.t1 AT3G61830 34.783 115 63 2 796 910 449 551 6.26e-12 69.7
MS.gene34892.t1 AT1G34310 43.213 361 197 4 14 374 18 370 1.36e-91 302
MS.gene34892.t1 AT1G34410 42.382 361 200 4 14 374 18 370 1.84e-90 300
MS.gene34892.t1 AT1G35540 42.775 346 190 4 14 359 18 355 3.50e-90 299
MS.gene34892.t1 AT1G35540 27.273 264 165 7 633 874 339 597 1.10e-14 78.6
MS.gene34892.t1 AT1G35240 42.105 361 201 4 14 374 18 370 7.04e-90 298
MS.gene34892.t1 AT1G35520 42.458 358 198 4 17 374 21 370 2.04e-87 291
MS.gene34892.t1 AT1G34170 43.478 345 183 6 17 358 19 354 1.84e-85 283
MS.gene34892.t1 AT1G34390 42.659 361 197 5 14 374 18 368 4.08e-85 285
MS.gene34892.t1 AT2G46530 54.435 248 109 3 120 367 31 274 4.12e-83 277
MS.gene34892.t1 AT2G46530 29.101 189 104 6 694 879 334 495 1.32e-12 71.6
MS.gene34892.t1 AT2G33860 50.368 272 128 3 126 391 2 272 3.87e-82 273
MS.gene34892.t1 AT2G28350 38.771 423 197 12 16 387 3 414 3.23e-81 276
MS.gene34892.t1 AT2G28350 38.771 423 197 12 16 387 3 414 5.58e-81 276
MS.gene34892.t1 AT4G30080 39.401 401 182 10 11 361 7 396 4.53e-80 273
MS.gene34892.t1 AT1G34170 40.000 345 169 5 17 358 19 328 3.09e-75 254
MS.gene34892.t1 AT1G34170 40.000 345 169 5 17 358 19 328 2.28e-74 254
MS.gene34892.t1 AT1G77850 34.586 399 214 9 18 379 14 402 9.90e-59 212
MS.gene34892.t1 AT1G77850 34.586 399 214 9 18 379 14 402 1.05e-58 212
MS.gene34892.t1 AT1G43950 43.396 212 113 3 14 225 18 222 2.90e-51 179
MS.gene34892.t1 AT5G37020 49.505 202 72 10 687 878 521 702 1.68e-41 163
MS.gene34892.t1 AT5G37020 49.505 202 72 10 687 878 616 797 3.90e-41 163
MS.gene34892.t1 AT5G37020 47.458 177 63 10 687 853 616 772 1.91e-30 129

Find 239 sgRNAs with CRISPR-Local

Find 442 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTGACTTTCTTGATTCTT+TGG 0.189382 4.1:-15745511 None:intergenic
ACTGAACGCCAATGTGAATT+TGG 0.198542 4.1:-15744430 None:intergenic
AGCGAGCTTGCTCGTATGTT+TGG 0.229386 4.1:+15746612 MS.gene34892:CDS
TGGAATCATACAGGATTTAA+AGG 0.245202 4.1:-15742516 None:intergenic
GGCTTGAAGGATGATGATTT+TGG 0.256318 4.1:+15745187 MS.gene34892:intron
TGGGGAGGCAAGCTTGGATT+TGG 0.258643 4.1:-15742271 None:intergenic
TACATTGGAAAGGTTGTTAA+TGG 0.261279 4.1:-15744689 None:intergenic
CTCGGGGTAGTTGGAGAATT+TGG 0.262748 4.1:-15746583 None:intergenic
TTTCAGTTGGTATGCGCTTC+AGG 0.267893 4.1:+15743822 MS.gene34892:CDS
TATGGCAGCTGCTGCACTTC+AGG 0.270423 4.1:+15745351 MS.gene34892:CDS
GTGATTCAGTGCTGTTTATA+TGG 0.300184 4.1:+15743153 MS.gene34892:CDS
GTGGACCCTCTCCTCTCTTC+AGG 0.319064 4.1:+15746000 MS.gene34892:CDS
ATCAGTTGCTTCTAGGTATT+CGG 0.320485 4.1:+15743522 MS.gene34892:CDS
TCTCCTTTGCACAATATGTT+AGG 0.328788 4.1:+15745874 MS.gene34892:CDS
AGCTGCCAGCCTGATCTTAC+AGG 0.338609 4.1:-15746657 None:intergenic
AGCAAGCTCGCTGCGTAGCT+CGG 0.341770 4.1:-15746601 None:intergenic
ATACCGTGGGTTATAGAAAA+TGG 0.343955 4.1:-15743657 None:intergenic
GCGAGCTTGCTCGTATGTTT+GGG 0.344249 4.1:+15746613 MS.gene34892:CDS
TATGAAGTTGACAAATAAGT+TGG 0.354297 4.1:-15742291 None:intergenic
ATGCAAGCCATTTCTTCAAT+TGG 0.357005 4.1:+15745811 MS.gene34892:CDS
GCAAGCTCGCTGCGTAGCTC+GGG 0.363954 4.1:-15746600 None:intergenic
AGTTGCTATTGACCCTCTTA+AGG 0.364462 4.1:-15746218 None:intergenic
TTCATGCAAACTCCAGAAAA+TGG 0.365340 4.1:+15746345 MS.gene34892:CDS
ATATTGTGCAAAGGAGAAAC+TGG 0.366291 4.1:-15745868 None:intergenic
TGAACAGGAACCCAAGAGTT+TGG 0.366298 4.1:-15745943 None:intergenic
AAGAGGCATTTGCTTACAAC+AGG 0.373664 4.1:+15743092 MS.gene34892:CDS
GGTAGGGAGTGTGCTATAGA+AGG 0.374075 4.1:+15746114 MS.gene34892:CDS
GCCATAGCTTGGTACATATC+TGG 0.374274 4.1:-15745334 None:intergenic
AGATACATGGGAACAATAAC+TGG 0.380369 4.1:+15744379 MS.gene34892:intron
TATTCGCAGGTTTACAAGTC+AGG 0.381678 4.1:+15746534 MS.gene34892:intron
GACTTGAGTTGTAGGTTGGC+TGG 0.385986 4.1:+15744612 MS.gene34892:intron
ATGAAGTTGACAAATAAGTT+GGG 0.388997 4.1:-15742290 None:intergenic
CACACTCCCTACCAGGAAAT+GGG 0.390694 4.1:-15746104 None:intergenic
CTGCGTCTCGAAGCCACAAC+AGG 0.392277 4.1:-15745222 None:intergenic
GCTCGTATGTTTGGGCTTGA+AGG 0.392587 4.1:+15746621 MS.gene34892:CDS
GGGGAGGCAAGCTTGGATTT+GGG 0.394256 4.1:-15742270 None:intergenic
GCACACTCCCTACCAGGAAA+TGG 0.395718 4.1:-15746105 None:intergenic
CTTGTTTGTTTGCCAGCTGA+TGG 0.397601 4.1:+15741602 MS.gene34892:CDS
ATCTGGTTGCAAATTCATAA+TGG 0.399783 4.1:-15745317 None:intergenic
CCATGGAATGAAGGCAGTCC+TGG 0.403897 4.1:-15744752 None:intergenic
ATGAGATGTCTAACCTTAAG+AGG 0.410321 4.1:+15746205 MS.gene34892:CDS
GCTGCGTAGCTCGGGGTAGT+TGG 0.412765 4.1:-15746592 None:intergenic
AAGGTGAGATGTTTCGTCAT+TGG 0.413056 4.1:-15745905 None:intergenic
GCTGATTCTTCTCTGAATCC+TGG 0.420963 4.1:+15746294 MS.gene34892:CDS
AAGGGATGGGTGTTAATCCT+TGG 0.424232 4.1:+15745272 MS.gene34892:CDS
AGATACCATTAGAGAGCCTC+TGG 0.425190 4.1:-15746993 None:intergenic
ACTTTCCTAGACCAAACTCT+TGG 0.427845 4.1:+15745932 MS.gene34892:CDS
AGGTTGCTGTATCTACCAAC+AGG 0.429734 4.1:+15742230 MS.gene34892:intron
GCAGCAATCTCAACCTCATC+AGG 0.429884 4.1:+15745483 MS.gene34892:CDS
GAAATGAAGCTTTCTTCAGC+TGG 0.431077 4.1:+15741210 None:intergenic
GAACTTTGGCATGCTTGTGC+TGG 0.433280 4.1:+15741575 MS.gene34892:CDS
AAGAAATGGCTTGCATGGGC+TGG 0.435175 4.1:-15745804 None:intergenic
GAAGCAGGATGCTGTTTAGA+AGG 0.435618 4.1:-15745391 None:intergenic
AGGTTTCTCTGTTCCTCGCC+GGG 0.436191 4.1:+15742722 MS.gene34892:CDS
GGCATATCTTCCTGCAGAGT+TGG 0.437497 4.1:+15742629 MS.gene34892:CDS
ATAAGTTGGGGAGGCAAGCT+TGG 0.441494 4.1:-15742277 None:intergenic
GTTGTAAGCAAATGCCTCTT+CGG 0.441630 4.1:-15743089 None:intergenic
ATTAATGCTCGCAGGCTTGA+AGG 0.444037 4.1:+15745174 MS.gene34892:intron
GTTTGGGCTTGAAGGTGAGT+TGG 0.444151 4.1:+15746629 MS.gene34892:CDS
TGTTAAAACCAAACAAAAGA+TGG 0.446571 4.1:-15746155 None:intergenic
CCCATTTGCTGCACTTCCTG+AGG 0.448578 4.1:-15746934 None:intergenic
TTGATGGCCAATTGAAGAAA+TGG 0.451631 4.1:-15745818 None:intergenic
GTTTACAAGTCAGGGTCCTT+CGG 0.452335 4.1:+15746543 MS.gene34892:CDS
AATTGAAGAAATGGCTTGCA+TGG 0.453786 4.1:-15745809 None:intergenic
ATTAAAGCAGCATTACCATT+GGG 0.454667 4.1:-15745445 None:intergenic
TCCACCTACTTGAATACAAC+AGG 0.455023 4.1:+15746270 MS.gene34892:CDS
CCAGGACTGCCTTCATTCCA+TGG 0.458099 4.1:+15744752 MS.gene34892:CDS
TTCTCCTCGGTGATGGTCCA+TGG 0.461154 4.1:+15746709 MS.gene34892:CDS
TACATTCTCATGCAGATACA+TGG 0.463139 4.1:+15744366 MS.gene34892:intron
TCCACAAGGTCACAGTGAAC+AGG 0.463370 4.1:+15741643 MS.gene34892:CDS
CCCTCAGGAAGTGCAGCAAA+TGG 0.463515 4.1:+15746933 MS.gene34892:CDS
CCTCAGGAAGTGCAGCAAAT+GGG 0.464104 4.1:+15746934 MS.gene34892:CDS
GCATATCTTCCTGCAGAGTT+GGG 0.465141 4.1:+15742630 MS.gene34892:CDS
CCAACCCAGAGGCTCTCTAA+TGG 0.466585 4.1:+15746988 MS.gene34892:CDS
CTGCCTCAAGTGGAGCAACT+AGG 0.466657 4.1:+15746039 MS.gene34892:CDS
ACACACGGCGTCGGTGAGTC+GGG 0.468905 4.1:+15746321 MS.gene34892:CDS
CTTTCCTAGACCAAACTCTT+GGG 0.472118 4.1:+15745933 MS.gene34892:CDS
GACACACGGCGTCGGTGAGT+CGG 0.474133 4.1:+15746320 MS.gene34892:CDS
TAAGCAAATGCCTCTTCGGC+TGG 0.475169 4.1:-15743085 None:intergenic
TTTGCAGTTCCCAACTCTGC+AGG 0.476648 4.1:-15742639 None:intergenic
GAGGTTTCTCTGTTCCTCGC+CGG 0.477951 4.1:+15742721 MS.gene34892:CDS
AGAAATGGCTTGCATGGGCT+GGG 0.479926 4.1:-15745803 None:intergenic
GGGAATTTGTAAATAGTGTA+TGG 0.480304 4.1:+15746893 MS.gene34892:intron
GTGCAGCAGCTGCCATAGCT+TGG 0.481330 4.1:-15745345 None:intergenic
CCATTTGCTGCACTTCCTGA+GGG 0.482915 4.1:-15746933 None:intergenic
CTTAAAAGACCATGGCCTCC+AGG 0.488344 4.1:+15744734 MS.gene34892:CDS
TCAGCATCCATCTCAATCTC+AGG 0.490548 4.1:+15745528 MS.gene34892:CDS
TCGAGCCTTGCCTGCATCCA+AGG 0.490879 4.1:-15745289 None:intergenic
CCGACGCCGTGTGTCAATCC+AGG 0.491733 4.1:-15746312 None:intergenic
GCATGAATTCTCCCCTGTTG+TGG 0.492582 4.1:+15745209 MS.gene34892:CDS
CGTGCAGTTGAAGATTGAAC+AGG 0.494375 4.1:-15745958 None:intergenic
TCCCCTAGCGAAGTATGTTA+AGG 0.498659 4.1:+15743781 MS.gene34892:CDS
CTTTCCGATTCAGGCAGATA+CGG 0.499296 4.1:+15742458 MS.gene34892:intron
CTGCTGCACTTCAGGATATG+AGG 0.502048 4.1:+15745359 MS.gene34892:CDS
GACTCAAGAAATTTAAGCAC+CGG 0.503839 4.1:+15747039 MS.gene34892:CDS
CAGCCTTAACATACTTCGCT+AGG 0.504229 4.1:-15743784 None:intergenic
TGGCTTCGAGACGCAGATAG+AGG 0.506368 4.1:+15745229 MS.gene34892:CDS
AGGGTCCACTGCAACACGCT+TGG 0.506935 4.1:-15745986 None:intergenic
TCCGTGAGTGCTTGTATCAC+TGG 0.508076 4.1:-15742700 None:intergenic
AAACAGAGGAATCTAGTGTT+CGG 0.509576 4.1:+15743855 MS.gene34892:CDS
GATGTTCTTCTCCTCGGTGA+TGG 0.510947 4.1:+15746702 MS.gene34892:CDS
GAAGGCAGTCCTGGAGGCCA+TGG 0.511226 4.1:-15744743 None:intergenic
CTTGCAATCAACTCTTGAGC+AGG 0.511437 4.1:-15742874 None:intergenic
ACCACACGGCTTCCATCAGC+TGG 0.511446 4.1:-15741614 None:intergenic
TTGGTCTAGGAAAGTTGAGA+AGG 0.513336 4.1:-15745924 None:intergenic
ATGGGCTGGGTTGATTGAGA+TGG 0.514302 4.1:-15745790 None:intergenic
ACTTGAGTTGTAGGTTGGCT+GGG 0.515012 4.1:+15744613 MS.gene34892:intron
TCACTTGACAACACTGATGA+AGG 0.515777 4.1:-15743572 None:intergenic
CATCAAGATACTTTCCCCTC+AGG 0.517145 4.1:+15746918 MS.gene34892:CDS
AGTGCTAAAAGACTTGTTGC+TGG 0.517965 4.1:+15743131 MS.gene34892:CDS
GCTGATGCTGAAGAAGCTGC+TGG 0.519478 4.1:-15745567 None:intergenic
AAATGAAGCTTTCTTCAGCT+GGG 0.519795 4.1:+15741211 None:intergenic
TTGGAGGACCCTGTAAGATC+AGG 0.519960 4.1:+15746648 MS.gene34892:CDS
TGAAATTGAAGCAAGGAAGC+AGG 0.524510 4.1:-15745406 None:intergenic
GGAACCCAAGAGTTTGGTCT+AGG 0.525232 4.1:-15745937 None:intergenic
GCCTTCCAAGCGTGTTGCAG+TGG 0.529518 4.1:+15745981 MS.gene34892:CDS
GGGATTTGCATGGTAATGAC+TGG 0.530676 4.1:+15742896 MS.gene34892:CDS
GGTTGCAAATTCATAATGGA+TGG 0.532001 4.1:-15745313 None:intergenic
TGCCCTAGTTGCTCCACTTG+AGG 0.532182 4.1:-15746042 None:intergenic
GAGAATGATGTTCTTCTCCT+CGG 0.532335 4.1:+15746696 MS.gene34892:CDS
TGGGCTTGAAGGTGAGTTGG+AGG 0.533111 4.1:+15746632 MS.gene34892:CDS
ATGCTCCTGAAGAGAGGAGA+GGG 0.533115 4.1:-15746005 None:intergenic
TGCCTCAAGTGGAGCAACTA+GGG 0.534716 4.1:+15746040 MS.gene34892:CDS
CATTAAAGCAGCATTACCAT+TGG 0.538149 4.1:-15745446 None:intergenic
GGGTTCTAGATTCAGAACTT+TGG 0.538993 4.1:+15741561 MS.gene34892:CDS
GGCTGGGTTGATTGAGATGG+AGG 0.539093 4.1:-15745787 None:intergenic
GGGTGTTAATCCTTGGATGC+AGG 0.542296 4.1:+15745279 MS.gene34892:CDS
CAACTACCTTCTTGAGGTGG+AGG 0.543165 4.1:-15741240 None:intergenic
GGCTGGGATGAGTCTACAGC+AGG 0.544791 4.1:+15744629 MS.gene34892:CDS
TTAATCCTTGGATGCAGGCA+AGG 0.545851 4.1:+15745284 MS.gene34892:CDS
ACCTGTTCACTGTGACCTTG+TGG 0.547238 4.1:-15741644 None:intergenic
TTGGCCATCGGACAGAATCC+AGG 0.547551 4.1:-15744411 None:intergenic
TTCACATTGGCGTTCAGTGA+AGG 0.548810 4.1:+15744435 MS.gene34892:CDS
TCATTATGTTCTGCCTCAAG+TGG 0.551572 4.1:+15746029 MS.gene34892:CDS
TGCTCAAGAGTTGATTGCAA+GGG 0.552602 4.1:+15742876 MS.gene34892:CDS
TTAAATTTCTTGAGTCCTCA+CGG 0.552610 4.1:-15747032 None:intergenic
GTCAAGTGATAGCATGCACT+TGG 0.552772 4.1:+15743586 MS.gene34892:CDS
TCAAGTGATAGCATGCACTT+GGG 0.553043 4.1:+15743587 MS.gene34892:CDS
TCTATAGCACACTCCCTACC+AGG 0.553587 4.1:-15746111 None:intergenic
CTCAGGAAGTGCAGCAAATG+GGG 0.553810 4.1:+15746935 MS.gene34892:CDS
ACTCCAGAAAATGGAGGTCA+AGG 0.554636 4.1:+15746354 MS.gene34892:CDS
AAGTAGGTGGAAGATTGAAA+AGG 0.555292 4.1:-15746258 None:intergenic
TTTCTCCAGGCCAGCCGAAG+AGG 0.555501 4.1:+15743075 MS.gene34892:intron
AGGGGAATGACAAATTCTGA+TGG 0.555697 4.1:-15743764 None:intergenic
AGCACCGGGCTAACAACTGT+GGG 0.556315 4.1:+15747054 MS.gene34892:CDS
AATAACTGGCATCAGTGACC+TGG 0.557935 4.1:+15744393 MS.gene34892:CDS
CCATTAGAGAGCCTCTGGGT+TGG 0.558285 4.1:-15746988 None:intergenic
TACAGGATTTAAAGGTTGCA+AGG 0.559293 4.1:-15742508 None:intergenic
AGCCTTAACATACTTCGCTA+GGG 0.561434 4.1:-15743783 None:intergenic
TCCACTGCAACACGCTTGGA+AGG 0.562459 4.1:-15745982 None:intergenic
ATTTCCCACAGAGATACTCT+AGG 0.563427 4.1:-15744662 None:intergenic
AGACCCCACAGTTGTTAGCC+CGG 0.563613 4.1:-15747058 None:intergenic
CAAGCTCGCTGCGTAGCTCG+GGG 0.569479 4.1:-15746599 None:intergenic
ACCAGATATGTACCAAGCTA+TGG 0.570485 4.1:+15745333 MS.gene34892:CDS
GGGAACGGAGATGGATACAT+TGG 0.570572 4.1:-15744704 None:intergenic
GAAATTCAACTACCTTCTTG+AGG 0.571278 4.1:-15741246 None:intergenic
AGGGTCCTTCGGAAGATCGT+TGG 0.572201 4.1:+15746554 MS.gene34892:CDS
ATATACATACCATGGAATGA+AGG 0.572440 4.1:-15744761 None:intergenic
GTTCAGAAGCTCTAGACCAT+TGG 0.572551 4.1:-15746959 None:intergenic
TATCATACTCGAGTTTCAGT+TGG 0.576668 4.1:+15743809 MS.gene34892:CDS
CTGCTCAAGAGTTGATTGCA+AGG 0.576835 4.1:+15742875 MS.gene34892:CDS
CCCTTAGGCTTAAAAGACCA+TGG 0.577894 4.1:+15744726 MS.gene34892:CDS
GTGCAGCAAATGGGGACCAA+TGG 0.578418 4.1:+15746943 MS.gene34892:CDS
ATTCGCAGGTTTACAAGTCA+GGG 0.579457 4.1:+15746535 MS.gene34892:intron
ATTGTAAACTAGATGTGATG+AGG 0.582412 4.1:-15746184 None:intergenic
TGAAGTTGACAAATAAGTTG+GGG 0.582623 4.1:-15742289 None:intergenic
ATGTGGAGTACTTACGGCCA+TGG 0.583406 4.1:-15746726 None:intergenic
CTGTTCAATCTTCAACTGCA+CGG 0.586537 4.1:+15745959 MS.gene34892:CDS
CTGAATCCTGGATTGACACA+CGG 0.591407 4.1:+15746306 MS.gene34892:CDS
GCCAGTGATACAAGCACTCA+CGG 0.594666 4.1:+15742699 MS.gene34892:CDS
ATAAGTATCAACTTCCCTGT+TGG 0.595354 4.1:-15742245 None:intergenic
TTCAGTCCTCCACCTCAAGA+AGG 0.597165 4.1:+15741234 MS.gene34892:CDS
GGCTTCGAGACGCAGATAGA+GGG 0.597637 4.1:+15745230 MS.gene34892:CDS
TGCGTCTCGAAGCCACAACA+GGG 0.598435 4.1:-15745221 None:intergenic
TTACCATTGGGGAAATTCTG+TGG 0.598510 4.1:-15745433 None:intergenic
GCCAATGTGAATTTGGCCAT+CGG 0.598997 4.1:-15744423 None:intergenic
GTTTGAGCCTGAGATTGAGA+TGG 0.599594 4.1:-15745535 None:intergenic
GGGGAATGACAAATTCTGAT+GGG 0.599780 4.1:-15743763 None:intergenic
GCAATCAACTCTTGAGCAGG+AGG 0.600892 4.1:-15742871 None:intergenic
CGTGTGGTTTACTTTCCACA+AGG 0.600967 4.1:+15741629 MS.gene34892:CDS
ATTCAACTACCTTCTTGAGG+TGG 0.602322 4.1:-15741243 None:intergenic
GAACCTAACATATTGTGCAA+AGG 0.604600 4.1:-15745877 None:intergenic
AAACTGAGACATTGTGGAGA+CGG 0.604719 4.1:-15745755 None:intergenic
GTAGGGAGTGTGCTATAGAA+GGG 0.607907 4.1:+15746115 MS.gene34892:CDS
ACCTGTTGTATTCAAGTAGG+TGG 0.609048 4.1:-15746271 None:intergenic
TTGATTGCAAGGGATTTGCA+TGG 0.612121 4.1:+15742886 MS.gene34892:CDS
GTGACAAATGTTACCAATGG+AGG 0.615770 4.1:-15742762 None:intergenic
AAGCACCGGGCTAACAACTG+TGG 0.618900 4.1:+15747053 MS.gene34892:CDS
TTGTAAACTAGATGTGATGA+GGG 0.620621 4.1:-15746183 None:intergenic
ACAAAACAAAACCTTTGTGA+AGG 0.621374 4.1:+15746383 MS.gene34892:CDS
TTCTTTGGAAAAGCCTGATG+AGG 0.623103 4.1:-15745496 None:intergenic
AATGAGATGCTCCTGAAGAG+AGG 0.623824 4.1:-15746011 None:intergenic
CACTCCCTACCAGGAAATGG+GGG 0.625279 4.1:-15746102 None:intergenic
TTAAAGCAGCATTACCATTG+GGG 0.625568 4.1:-15745444 None:intergenic
GTGACCTGGATTCTGTCCGA+TGG 0.625572 4.1:+15744407 MS.gene34892:CDS
ACTCAAGAAATTTAAGCACC+GGG 0.627306 4.1:+15747040 MS.gene34892:CDS
ACACTCCCTACCAGGAAATG+GGG 0.632565 4.1:-15746103 None:intergenic
AGGACCCTGTAAGATCAGGC+TGG 0.634660 4.1:+15746652 MS.gene34892:CDS
ACATTCTCATGCAGATACAT+GGG 0.635397 4.1:+15744367 MS.gene34892:intron
TGAGATGTCTAACCTTAAGA+GGG 0.641318 4.1:+15746206 MS.gene34892:CDS
AAATTCAAACATATCTTCCG+TGG 0.642080 4.1:+15742919 MS.gene34892:CDS
ATGAGTCTACAGCAGGTGAG+AGG 0.642295 4.1:+15744636 MS.gene34892:CDS
TGGCTGCTGAAATTGAAGCA+AGG 0.648136 4.1:-15745413 None:intergenic
GGCATTTGCTTACAACAGGG+TGG 0.648334 4.1:+15743096 MS.gene34892:CDS
GCCTTAACATACTTCGCTAG+GGG 0.649114 4.1:-15743782 None:intergenic
CGGAGATGGATACATTGGAA+AGG 0.649481 4.1:-15744699 None:intergenic
ATTGAAGAAATGGCTTGCAT+GGG 0.649927 4.1:-15745808 None:intergenic
TCAGCTGGCAAACAAACAAG+AGG 0.650775 4.1:-15741599 None:intergenic
TCCGATGGCCAAATTCACAT+TGG 0.651255 4.1:+15744422 MS.gene34892:CDS
TATTGTGCAAAGGAGAAACT+GGG 0.652854 4.1:-15745867 None:intergenic
AGTTGACAAATAAGTTGGGG+AGG 0.654219 4.1:-15742286 None:intergenic
AGCACCTGTTGTATTCAAGT+AGG 0.655572 4.1:-15746274 None:intergenic
CCTGGATTGACACACGGCGT+CGG 0.655958 4.1:+15746312 MS.gene34892:CDS
GCTGCCAGCCTGATCTTACA+GGG 0.660689 4.1:-15746656 None:intergenic
GCAACCTAGAGTATCTCTGT+GGG 0.661759 4.1:+15744658 MS.gene34892:CDS
GATATCCAACGATCTTCCGA+AGG 0.662259 4.1:-15746559 None:intergenic
CAGCCACAGAATTTCCCCAA+TGG 0.663679 4.1:+15745430 MS.gene34892:CDS
GGCAACCTAGAGTATCTCTG+TGG 0.664195 4.1:+15744657 MS.gene34892:CDS
ATGCAAACTCCAGAAAATGG+AGG 0.664767 4.1:+15746348 MS.gene34892:CDS
CATTTGCTGCACTTCCTGAG+GGG 0.665248 4.1:-15746932 None:intergenic
TGGAATGAAGGCAGTCCTGG+AGG 0.674670 4.1:-15744749 None:intergenic
GATGCTCCTGAAGAGAGGAG+AGG 0.678168 4.1:-15746006 None:intergenic
GCCAGCTGATGGAAGCCGTG+TGG 0.680240 4.1:+15741613 MS.gene34892:CDS
GATACCATTAGAGAGCCTCT+GGG 0.685450 4.1:-15746992 None:intergenic
CAGAGGAATCTAGTGTTCGG+CGG 0.695262 4.1:+15743858 MS.gene34892:CDS
GGAAACAAACTGAGACATTG+TGG 0.695886 4.1:-15745761 None:intergenic
GGTATCTGTGATGACTACAC+TGG 0.700699 4.1:+15747009 MS.gene34892:CDS
CTTGTGGAAAGTAAACCACA+CGG 0.702035 4.1:-15741628 None:intergenic
CAAGTGATAGCATGCACTTG+GGG 0.704154 4.1:+15743588 MS.gene34892:CDS
TGAACTCAGCTCCAACCCAG+AGG 0.710806 4.1:+15746977 MS.gene34892:CDS
AGAGGCATTTGCTTACAACA+GGG 0.723052 4.1:+15743093 MS.gene34892:CDS
GATGAAGGCATCATATGTTG+TGG 0.726564 4.1:-15743557 None:intergenic
GCGTCTCGAAGCCACAACAG+GGG 0.732410 4.1:-15745220 None:intergenic
GGTTGATTGAGATGGAGGTG+CGG 0.732986 4.1:-15745782 None:intergenic
TGATGACTACACTGGCCGTG+AGG 0.736330 4.1:+15747017 MS.gene34892:CDS
GGTTGCTGTATCTACCAACA+GGG 0.736678 4.1:+15742231 MS.gene34892:intron
GCACCGGGCTAACAACTGTG+GGG 0.750709 4.1:+15747055 MS.gene34892:CDS
ACGGCCATGGACCATCACCG+AGG 0.789227 4.1:-15746713 None:intergenic
AGTGATACAAGCACTCACGG+AGG 0.828898 4.1:+15742702 MS.gene34892:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAATAATAATAATAAT+TGG + chr4.1:15741760-15741779 MS.gene34892:intron 0.0%
!! ATCAATGAAATATATTATAA+AGG - chr4.1:15744473-15744492 None:intergenic 10.0%
!! GTAAAAAAATAAAAAATAAG+AGG - chr4.1:15742971-15742990 None:intergenic 10.0%
!! TAATTGTGATATTATATAAT+TGG + chr4.1:15743458-15743477 MS.gene34892:intron 10.0%
!!! AAAAGTTCTTAAATATTTTT+TGG - chr4.1:15744800-15744819 None:intergenic 10.0%
!!! AAGAATTTTTCTATTAAATT+AGG - chr4.1:15744024-15744043 None:intergenic 10.0%
!!! TAACAATTTTTTTTCATTTT+GGG + chr4.1:15741320-15741339 MS.gene34892:intron 10.0%
!! AAAAAAAATTGTTACCAAAA+AGG - chr4.1:15741314-15741333 None:intergenic 15.0%
!! AACTAATAGAAATATATGAT+AGG - chr4.1:15743684-15743703 None:intergenic 15.0%
!! AATTTGTATGTCTAATAATA+TGG + chr4.1:15741394-15741413 MS.gene34892:intron 15.0%
!! TAATAATGAAAGAGATAAAT+TGG + chr4.1:15746777-15746796 MS.gene34892:intron 15.0%
!!! AACAATTTTTTTTCATTTTG+GGG + chr4.1:15741321-15741340 MS.gene34892:intron 15.0%
!!! GTAACAATTTTTTTTCATTT+TGG + chr4.1:15741319-15741338 MS.gene34892:intron 15.0%
!!! TGAATAAACATTTTTAATTG+TGG + chr4.1:15744585-15744604 MS.gene34892:intron 15.0%
!! AAAAAATTAAACACAGAACA+AGG - chr4.1:15746758-15746777 None:intergenic 20.0%
!! AAAGCTAGATTAATTGATTA+TGG - chr4.1:15745092-15745111 None:intergenic 20.0%
!! AAGAAATGAACAAATTGTTA+AGG - chr4.1:15742441-15742460 None:intergenic 20.0%
!! AGAATAAGTAGATTAGTAAA+AGG - chr4.1:15745140-15745159 None:intergenic 20.0%
!! ATAATTGTTGAAAATGATAG+TGG + chr4.1:15743891-15743910 MS.gene34892:intron 20.0%
!! CCAAATTTAAACCTTATAAA+TGG - chr4.1:15743048-15743067 None:intergenic 20.0%
!! CCATTTATAAGGTTTAAATT+TGG + chr4.1:15743045-15743064 MS.gene34892:intron 20.0%
!! TATATAATTGGTGTGATTTA+TGG + chr4.1:15743470-15743489 MS.gene34892:intron 20.0%
!!! AAGAACTTTTCTTACTATTT+AGG + chr4.1:15744810-15744829 MS.gene34892:intron 20.0%
!!! AATATTTTTTGGCTTAAATG+TGG - chr4.1:15744789-15744808 None:intergenic 20.0%
!!! ACATTCAACTTTTTAACTTT+TGG + chr4.1:15742574-15742593 MS.gene34892:intron 20.0%
!!! ATAATTTTGATTAGTGAATG+AGG - chr4.1:15745593-15745612 None:intergenic 20.0%
!!! GATATTATTGATGTTTTGTT+TGG - chr4.1:15744532-15744551 None:intergenic 20.0%
!!! TAATTTTGATTAGTGAATGA+GGG - chr4.1:15745592-15745611 None:intergenic 20.0%
!!! TATTATTTTTTAACACACCA+TGG - chr4.1:15741752-15741771 None:intergenic 20.0%
!!! TTTCTTAGTTTTTCTAATCT+AGG + chr4.1:15743409-15743428 MS.gene34892:intron 20.0%
!!! TTTTCTTATGTTTGAAATGT+TGG + chr4.1:15743924-15743943 MS.gene34892:intron 20.0%
! AAAGTTCCTTTATCATTTGT+GGG + chr4.1:15741465-15741484 MS.gene34892:intron 25.0%
! AAGACTAAATTTGAGTCAAA+AGG - chr4.1:15744170-15744189 None:intergenic 25.0%
! AAGTTCACATTCCATTTATA+AGG + chr4.1:15743034-15743053 MS.gene34892:intron 25.0%
! ACATCAATAATATCTTGCTT+CGG + chr4.1:15744538-15744557 MS.gene34892:intron 25.0%
! AGTGAGATAAAGTAAGAATA+TGG + chr4.1:15744216-15744235 MS.gene34892:intron 25.0%
! ATGAAGTTGACAAATAAGTT+GGG - chr4.1:15742293-15742312 None:intergenic 25.0%
! ATTAGTTCCAAGTTAGAATA+TGG + chr4.1:15743697-15743716 MS.gene34892:intron 25.0%
! GTTAAGCATTAGTATAAACA+CGG - chr4.1:15742022-15742041 None:intergenic 25.0%
! TATGAAGTTGACAAATAAGT+TGG - chr4.1:15742294-15742313 None:intergenic 25.0%
! TGATTAAATTCATCATTGAG+TGG + chr4.1:15744296-15744315 MS.gene34892:intron 25.0%
! TGTTAAAACCAAACAAAAGA+TGG - chr4.1:15746158-15746177 None:intergenic 25.0%
! TTAAGCATTAGTATAAACAC+GGG - chr4.1:15742021-15742040 None:intergenic 25.0%
! TTATCCTATATTCTTCTGAA+TGG - chr4.1:15743289-15743308 None:intergenic 25.0%
! TTGTATGTCTAATAATATGG+TGG + chr4.1:15741397-15741416 MS.gene34892:intron 25.0%
!! AGAATCTATTTTCAATCGAA+TGG + chr4.1:15746800-15746819 MS.gene34892:intron 25.0%
!! AGCTTTTCATGTTTATTACT+TGG + chr4.1:15743001-15743020 MS.gene34892:intron 25.0%
!! ATGTTTGAAATGTTGGTTAA+TGG + chr4.1:15743931-15743950 MS.gene34892:intron 25.0%
!! TATGTCTGAAATTTAACCTT+TGG + chr4.1:15743197-15743216 MS.gene34892:intron 25.0%
!! TGTTTCATATTGATGACATT+AGG + chr4.1:15741513-15741532 MS.gene34892:intron 25.0%
!! TTCAGACTCTTAATTTTCAA+GGG + chr4.1:15745254-15745273 MS.gene34892:CDS 25.0%
!! TTTTCATGTTTATTACTTGG+TGG + chr4.1:15743004-15743023 MS.gene34892:intron 25.0%
!!! AATACTTGTTTTTCAAACCA+TGG + chr4.1:15741732-15741751 MS.gene34892:intron 25.0%
!!! ATTAGGATGCATTTTTTTGT+AGG + chr4.1:15741530-15741549 MS.gene34892:intron 25.0%
!!! ATTTATGGTGCTTTTTTCTT+TGG + chr4.1:15743485-15743504 MS.gene34892:intron 25.0%
!!! ATTTTGCAAAAGTAGTTTGT+TGG - chr4.1:15742672-15742691 None:intergenic 25.0%
!!! ATTTTTTTGTAGGAGAAAAG+CGG + chr4.1:15741540-15741559 MS.gene34892:intron 25.0%
AAAGGATTGAGAAAGTGAAA+TGG - chr4.1:15741296-15741315 None:intergenic 30.0%
AAATTCAAACATATCTTCCG+TGG + chr4.1:15742919-15742938 MS.gene34892:CDS 30.0%
AAGAGTGAAAATCAAGATGT+TGG - chr4.1:15746443-15746462 None:intergenic 30.0%
AATAAGCTGAAAACAACTCA+TGG + chr4.1:15744975-15744994 MS.gene34892:intron 30.0%
AATATATGATAGGTATACCG+TGG - chr4.1:15743674-15743693 None:intergenic 30.0%
AATTTAATCTCTCTATTCGC+AGG + chr4.1:15746521-15746540 MS.gene34892:intron 30.0%
ACAAAACAAAACCTTTGTGA+AGG + chr4.1:15746383-15746402 MS.gene34892:CDS 30.0%
ACAAATCGAAGACATGAAAA+AGG - chr4.1:15741788-15741807 None:intergenic 30.0%
ACATATTTGAGCTTATCTAC+TGG - chr4.1:15745056-15745075 None:intergenic 30.0%
ACGTTACTCAAATTCAATTC+AGG + chr4.1:15744071-15744090 MS.gene34892:intron 30.0%
ACTTCATAATTATGACCTAC+AGG + chr4.1:15742834-15742853 MS.gene34892:intron 30.0%
ATAATCTGACTATGCATGTA+AGG + chr4.1:15742311-15742330 MS.gene34892:intron 30.0%
ATATACATACCATGGAATGA+AGG - chr4.1:15744764-15744783 None:intergenic 30.0%
ATATATGATAGGTATACCGT+GGG - chr4.1:15743673-15743692 None:intergenic 30.0%
ATCTGGTTGCAAATTCATAA+TGG - chr4.1:15745320-15745339 None:intergenic 30.0%
ATTAAAGCAGCATTACCATT+GGG - chr4.1:15745448-15745467 None:intergenic 30.0%
ATTGTAAACTAGATGTGATG+AGG - chr4.1:15746187-15746206 None:intergenic 30.0%
CAAAGTTCCTTTATCATTTG+TGG + chr4.1:15741464-15741483 MS.gene34892:intron 30.0%
CAATTCAGGATATGGAATTA+CGG + chr4.1:15744085-15744104 MS.gene34892:intron 30.0%
CACAAATGATAAAGGAACTT+TGG - chr4.1:15741466-15741485 None:intergenic 30.0%
CTCAAATTCAATTCAGGATA+TGG + chr4.1:15744077-15744096 MS.gene34892:intron 30.0%
CTCAGATTTATAACTTACCA+CGG - chr4.1:15742939-15742958 None:intergenic 30.0%
CTTAAACCCACAAATGATAA+AGG - chr4.1:15741474-15741493 None:intergenic 30.0%
CTTAACTGAAACCAGATATT+TGG + chr4.1:15742542-15742561 MS.gene34892:intron 30.0%
CTTTATCATTTGTGGGTTTA+AGG + chr4.1:15741472-15741491 MS.gene34892:intron 30.0%
GAAAAAAATCAGTTGCTTCT+AGG + chr4.1:15743515-15743534 MS.gene34892:CDS 30.0%
GGGAATTTGTAAATAGTGTA+TGG + chr4.1:15746893-15746912 MS.gene34892:intron 30.0%
GTTAAGAAATGGAATCATAC+AGG - chr4.1:15742528-15742547 None:intergenic 30.0%
TAAGTAGCCATATTCTAACT+TGG - chr4.1:15743707-15743726 None:intergenic 30.0%
TACATTGGAAAGGTTGTTAA+TGG - chr4.1:15744692-15744711 None:intergenic 30.0%
TGAAGTTGACAAATAAGTTG+GGG - chr4.1:15742292-15742311 None:intergenic 30.0%
TGGAATCATACAGGATTTAA+AGG - chr4.1:15742519-15742538 None:intergenic 30.0%
TTAAATTTCTTGAGTCCTCA+CGG - chr4.1:15747035-15747054 None:intergenic 30.0%
TTAATTGATTATGGTCTGCT+AGG - chr4.1:15745083-15745102 None:intergenic 30.0%
TTAGATTTAGATGATTGCTG+AGG + chr4.1:15741366-15741385 MS.gene34892:intron 30.0%
TTATCTAGACGTGTCATAAA+TGG + chr4.1:15744124-15744143 MS.gene34892:intron 30.0%
TTGTAAACTAGATGTGATGA+GGG - chr4.1:15746186-15746205 None:intergenic 30.0%
TTTGCCATTCAGAAGAATAT+AGG + chr4.1:15743282-15743301 MS.gene34892:intron 30.0%
! AAAACTTTTCGGACTCAAAT+GGG + chr4.1:15745842-15745861 MS.gene34892:CDS 30.0%
! ATATGTGAGAGTATGAAACA+AGG - chr4.1:15742397-15742416 None:intergenic 30.0%
! ATCTGGTTTCAGTTAAGAAA+TGG - chr4.1:15742539-15742558 None:intergenic 30.0%
! CTTCAGACTCTTAATTTTCA+AGG + chr4.1:15745253-15745272 MS.gene34892:CDS 30.0%
! TTCAACAGTGATTTTTCTCT+AGG - chr4.1:15741704-15741723 None:intergenic 30.0%
! TTCACTTTCTCAATCCTTTT+TGG + chr4.1:15741297-15741316 MS.gene34892:intron 30.0%
! TTGGCTATTACAATGTTTTC+AGG + chr4.1:15742593-15742612 MS.gene34892:intron 30.0%
!! ACTCTTAATTTTCAAGGGAT+GGG + chr4.1:15745259-15745278 MS.gene34892:CDS 30.0%
!!! TCACAAAGGTTTTGTTTTGT+GGG - chr4.1:15746383-15746402 None:intergenic 30.0%
!!! TTCACAAAGGTTTTGTTTTG+TGG - chr4.1:15746384-15746403 None:intergenic 30.0%
!!! TTTTTTTGTAGGAGAAAAGC+GGG + chr4.1:15741541-15741560 MS.gene34892:intron 30.0%
AAACAGAGGAATCTAGTGTT+CGG + chr4.1:15743855-15743874 MS.gene34892:CDS 35.0%
AACAGTTAGTGTTTGTGCTT+AGG - chr4.1:15742050-15742069 None:intergenic 35.0%
AAGGCCAATTTGACAAAATC+AGG - chr4.1:15741934-15741953 None:intergenic 35.0%
AAGTAGGTGGAAGATTGAAA+AGG - chr4.1:15746261-15746280 None:intergenic 35.0%
ACAGTGACAAATGTTACCAA+TGG - chr4.1:15742768-15742787 None:intergenic 35.0%
ACATTCTCATGCAGATACAT+GGG + chr4.1:15744367-15744386 MS.gene34892:intron 35.0%
ACGACGTTTATGTAATTCAG+TGG - chr4.1:15746838-15746857 None:intergenic 35.0%
ACTCAAGAAATTTAAGCACC+GGG + chr4.1:15747040-15747059 MS.gene34892:CDS 35.0%
AGATACATGGGAACAATAAC+TGG + chr4.1:15744379-15744398 MS.gene34892:intron 35.0%
ATAAGTATCAACTTCCCTGT+TGG - chr4.1:15742248-15742267 None:intergenic 35.0%
ATATTGTGCAAAGGAGAAAC+TGG - chr4.1:15745871-15745890 None:intergenic 35.0%
ATCAGTTGCTTCTAGGTATT+CGG + chr4.1:15743522-15743541 MS.gene34892:CDS 35.0%
ATCTTTATAGAATGCACGCT+TGG - chr4.1:15744275-15744294 None:intergenic 35.0%
ATGAGATGTCTAACCTTAAG+AGG + chr4.1:15746205-15746224 MS.gene34892:CDS 35.0%
ATGCAAGCCATTTCTTCAAT+TGG + chr4.1:15745811-15745830 MS.gene34892:CDS 35.0%
ATGCACTTGTAAGACTGTTT+GGG - chr4.1:15745030-15745049 None:intergenic 35.0%
ATGTGGCAATATACATACCA+TGG - chr4.1:15744772-15744791 None:intergenic 35.0%
ATTAAACACAGAACAAGGCA+AGG - chr4.1:15746753-15746772 None:intergenic 35.0%
CATTAAAGCAGCATTACCAT+TGG - chr4.1:15745449-15745468 None:intergenic 35.0%
CTTACTATTTAGGCTCTGTT+TGG + chr4.1:15744820-15744839 MS.gene34892:intron 35.0%
GAAACCAGATATTTGGACTA+TGG + chr4.1:15742549-15742568 MS.gene34892:intron 35.0%
GAAATTCAACTACCTTCTTG+AGG - chr4.1:15741249-15741268 None:intergenic 35.0%
GAACCTAACATATTGTGCAA+AGG - chr4.1:15745880-15745899 None:intergenic 35.0%
GACTCAAGAAATTTAAGCAC+CGG + chr4.1:15747039-15747058 MS.gene34892:CDS 35.0%
GGCTATGACTTATGATAACT+TGG - chr4.1:15744003-15744022 None:intergenic 35.0%
TAAAAAGCTCACCTTCACAA+AGG - chr4.1:15746397-15746416 None:intergenic 35.0%
TACAGGATTTAAAGGTTGCA+AGG - chr4.1:15742511-15742530 None:intergenic 35.0%
TACATTCTCATGCAGATACA+TGG + chr4.1:15744366-15744385 MS.gene34892:intron 35.0%
TATCATACTCGAGTTTCAGT+TGG + chr4.1:15743809-15743828 MS.gene34892:CDS 35.0%
TATCATTTGTGGGTTTAAGG+TGG + chr4.1:15741475-15741494 MS.gene34892:intron 35.0%
TATTGTGCAAAGGAGAAACT+GGG - chr4.1:15745870-15745889 None:intergenic 35.0%
TCTCCTTTGCACAATATGTT+AGG + chr4.1:15745874-15745893 MS.gene34892:CDS 35.0%
TCTTTATAGAATGCACGCTT+GGG - chr4.1:15744274-15744293 None:intergenic 35.0%
TGAAAAAGTCTTTCCTCCAT+TGG + chr4.1:15742749-15742768 MS.gene34892:CDS 35.0%
TGAGATGTCTAACCTTAAGA+GGG + chr4.1:15746206-15746225 MS.gene34892:CDS 35.0%
TGATCCAATGTTCCATCAAT+GGG + chr4.1:15743351-15743370 MS.gene34892:intron 35.0%
TGTTCATTTCTTTCCGATTC+AGG + chr4.1:15742449-15742468 MS.gene34892:intron 35.0%
TTAAAGCAGCATTACCATTG+GGG - chr4.1:15745447-15745466 None:intergenic 35.0%
TTCATGCAAACTCCAGAAAA+TGG + chr4.1:15746345-15746364 MS.gene34892:CDS 35.0%
TTGATCCAATGTTCCATCAA+TGG + chr4.1:15743350-15743369 MS.gene34892:intron 35.0%
TTGTGTCTTTGTGATGCAAT+GGG + chr4.1:15741804-15741823 MS.gene34892:intron 35.0%
TTTAACCTTTGGCAGTTAAG+TGG + chr4.1:15743208-15743227 MS.gene34892:intron 35.0%
TTTGTGTCTTTGTGATGCAA+TGG + chr4.1:15741803-15741822 MS.gene34892:intron 35.0%
! AAATCTGCAATTTTCTGCTC+AGG + chr4.1:15742210-15742229 MS.gene34892:intron 35.0%
! AATTGAAGAAATGGCTTGCA+TGG - chr4.1:15745812-15745831 None:intergenic 35.0%
! ATACCGTGGGTTATAGAAAA+TGG - chr4.1:15743660-15743679 None:intergenic 35.0%
! ATCATTTGTGGGTTTAAGGT+GGG + chr4.1:15741476-15741495 MS.gene34892:intron 35.0%
! ATTGAAGAAATGGCTTGCAT+GGG - chr4.1:15745811-15745830 None:intergenic 35.0%
! CAAAACTTTTCGGACTCAAA+TGG + chr4.1:15745841-15745860 MS.gene34892:CDS 35.0%
! CCACAAAACCATCTTTTGTT+TGG + chr4.1:15746147-15746166 MS.gene34892:CDS 35.0%
! GGTTGCAAATTCATAATGGA+TGG - chr4.1:15745316-15745335 None:intergenic 35.0%
! GTGTAGCTTTTGCTAAAATC+AGG - chr4.1:15741882-15741901 None:intergenic 35.0%
! TCACCATTTTCTATAACCCA+CGG + chr4.1:15743654-15743673 MS.gene34892:CDS 35.0%
! TGGCCATCAACAAAACTTTT+CGG + chr4.1:15745831-15745850 MS.gene34892:CDS 35.0%
! TTGATGGCCAATTGAAGAAA+TGG - chr4.1:15745821-15745840 None:intergenic 35.0%
! TTGTTAAGGAAAAAGAGTGC+TGG - chr4.1:15742427-15742446 None:intergenic 35.0%
!! ATAAACACGGGTCATTTTAG+TGG - chr4.1:15742009-15742028 None:intergenic 35.0%
!! ATGTTTTCAGGAAGAGCAAA+AGG + chr4.1:15742605-15742624 MS.gene34892:intron 35.0%
!! ATTTGACTTGAGTTGTAGGT+TGG + chr4.1:15744608-15744627 MS.gene34892:intron 35.0%
!! CCAAACAAAAGATGGTTTTG+TGG - chr4.1:15746150-15746169 None:intergenic 35.0%
!! GACTCTTAATTTTCAAGGGA+TGG + chr4.1:15745258-15745277 MS.gene34892:CDS 35.0%
!! GTGATTCAGTGCTGTTTATA+TGG + chr4.1:15743153-15743172 MS.gene34892:CDS 35.0%
!!! AGTCCGAAAAGTTTTGTTGA+TGG - chr4.1:15745837-15745856 None:intergenic 35.0%
!!! CAAAAGATGGTTTTGTGGAT+CGG - chr4.1:15746145-15746164 None:intergenic 35.0%
AAACTGAGACATTGTGGAGA+CGG - chr4.1:15745758-15745777 None:intergenic 40.0%
AAGGTGAGATGTTTCGTCAT+TGG - chr4.1:15745908-15745927 None:intergenic 40.0%
ACCAGATATGTACCAAGCTA+TGG + chr4.1:15745333-15745352 MS.gene34892:CDS 40.0%
ACCTGTTGTATTCAAGTAGG+TGG - chr4.1:15746274-15746293 None:intergenic 40.0%
ACTGAACGCCAATGTGAATT+TGG - chr4.1:15744433-15744452 None:intergenic 40.0%
ACTTGTAAGACTGTTTGGGA+GGG - chr4.1:15745026-15745045 None:intergenic 40.0%
ACTTTCCTAGACCAAACTCT+TGG + chr4.1:15745932-15745951 MS.gene34892:CDS 40.0%
AGATATTGTCAGTCACACGT+TGG + chr4.1:15744321-15744340 MS.gene34892:intron 40.0%
AGCACCTGTTGTATTCAAGT+AGG - chr4.1:15746277-15746296 None:intergenic 40.0%
AGCCTTAACATACTTCGCTA+GGG - chr4.1:15743786-15743805 None:intergenic 40.0%
AGGGGAATGACAAATTCTGA+TGG - chr4.1:15743767-15743786 None:intergenic 40.0%
ATATTGTCAGTCACACGTTG+GGG + chr4.1:15744323-15744342 MS.gene34892:intron 40.0%
ATGCAAACTCCAGAAAATGG+AGG + chr4.1:15746348-15746367 MS.gene34892:CDS 40.0%
ATTCAACTACCTTCTTGAGG+TGG - chr4.1:15741246-15741265 None:intergenic 40.0%
ATTCCAAACATACAAGCGAC+GGG + chr4.1:15741955-15741974 MS.gene34892:intron 40.0%
ATTCGCAGGTTTACAAGTCA+GGG + chr4.1:15746535-15746554 MS.gene34892:intron 40.0%
ATTTCCCACAGAGATACTCT+AGG - chr4.1:15744665-15744684 None:intergenic 40.0%
CACTGAGTTTGGCAGAATTA+CGG + chr4.1:15741852-15741871 MS.gene34892:intron 40.0%
CATGCACTTGTAAGACTGTT+TGG - chr4.1:15745031-15745050 None:intergenic 40.0%
CTGTTCAATCTTCAACTGCA+CGG + chr4.1:15745959-15745978 MS.gene34892:CDS 40.0%
CTTGTGGAAAGTAAACCACA+CGG - chr4.1:15741631-15741650 None:intergenic 40.0%
CTTTCCTAGACCAAACTCTT+GGG + chr4.1:15745933-15745952 MS.gene34892:CDS 40.0%
GAGAATGATGTTCTTCTCCT+CGG + chr4.1:15746696-15746715 MS.gene34892:CDS 40.0%
GATATTGTCAGTCACACGTT+GGG + chr4.1:15744322-15744341 MS.gene34892:intron 40.0%
GATTCCAAACATACAAGCGA+CGG + chr4.1:15741954-15741973 MS.gene34892:intron 40.0%
GCCAATTTGACAAAATCAGG+TGG - chr4.1:15741931-15741950 None:intergenic 40.0%
GGAAACAAACTGAGACATTG+TGG - chr4.1:15745764-15745783 None:intergenic 40.0%
GGGGAATGACAAATTCTGAT+GGG - chr4.1:15743766-15743785 None:intergenic 40.0%
GTAGCCATAGTCCAAATATC+TGG - chr4.1:15742556-15742575 None:intergenic 40.0%
GTGACAAATGTTACCAATGG+AGG - chr4.1:15742765-15742784 None:intergenic 40.0%
GTTGTAAGCAAATGCCTCTT+CGG - chr4.1:15743092-15743111 None:intergenic 40.0%
TATTCGCAGGTTTACAAGTC+AGG + chr4.1:15746534-15746553 MS.gene34892:intron 40.0%
TCAAGTGATAGCATGCACTT+GGG + chr4.1:15743587-15743606 MS.gene34892:CDS 40.0%
TCACTTGACAACACTGATGA+AGG - chr4.1:15743575-15743594 None:intergenic 40.0%
TCATTATGTTCTGCCTCAAG+TGG + chr4.1:15746029-15746048 MS.gene34892:CDS 40.0%
TCCACCTACTTGAATACAAC+AGG + chr4.1:15746270-15746289 MS.gene34892:CDS 40.0%
TGAAATTGAAGCAAGGAAGC+AGG - chr4.1:15745409-15745428 None:intergenic 40.0%
TGCAAATTGCAACTGTAGTG+TGG + chr4.1:15743375-15743394 MS.gene34892:intron 40.0%
TGCAATTTGCAACCCATTGA+TGG - chr4.1:15743366-15743385 None:intergenic 40.0%
TTACCATTGGGGAAATTCTG+TGG - chr4.1:15745436-15745455 None:intergenic 40.0%
TTGATTGCAAGGGATTTGCA+TGG + chr4.1:15742886-15742905 MS.gene34892:CDS 40.0%
TTGGTCTAGGAAAGTTGAGA+AGG - chr4.1:15745927-15745946 None:intergenic 40.0%
! AACTTTTGTGAAACGCAACG+TGG - chr4.1:15746469-15746488 None:intergenic 40.0%
! AGTTGACAAATAAGTTGGGG+AGG - chr4.1:15742289-15742308 None:intergenic 40.0%
! AGTTGCTATTGACCCTCTTA+AGG - chr4.1:15746221-15746240 None:intergenic 40.0%
! ATGGTCTTTTAAGCCTAAGG+GGG - chr4.1:15744727-15744746 None:intergenic 40.0%
! CAAGGAATGTGGAGTACTTA+CGG - chr4.1:15746735-15746754 None:intergenic 40.0%
! CATGGTCTTTTAAGCCTAAG+GGG - chr4.1:15744728-15744747 None:intergenic 40.0%
! CCATGGTCTTTTAAGCCTAA+GGG - chr4.1:15744729-15744748 None:intergenic 40.0%
! CGCTTGTATGTTTGGAATCA+AGG - chr4.1:15741953-15741972 None:intergenic 40.0%
! CGTTCAGTGAAGGTATGTAT+TGG + chr4.1:15744445-15744464 MS.gene34892:intron 40.0%
! GAAGGTGAGCTTTTTATGCT+GGG + chr4.1:15746401-15746420 MS.gene34892:intron 40.0%
! GCCACCTGATTTTGTCAAAT+TGG + chr4.1:15741927-15741946 MS.gene34892:intron 40.0%
! GGCTTGAAGGATGATGATTT+TGG + chr4.1:15745187-15745206 MS.gene34892:intron 40.0%
! GGGCTGCTAATTTGTATGTT+CGG + chr4.1:15741824-15741843 MS.gene34892:intron 40.0%
! TGAAGGTGAGCTTTTTATGC+TGG + chr4.1:15746400-15746419 MS.gene34892:intron 40.0%
! TGCTCAAGAGTTGATTGCAA+GGG + chr4.1:15742876-15742895 MS.gene34892:CDS 40.0%
! TTTCCTTGACCTCCATTTTC+TGG - chr4.1:15746360-15746379 None:intergenic 40.0%
!! AAGAGGCATTTGCTTACAAC+AGG + chr4.1:15743092-15743111 MS.gene34892:CDS 40.0%
!! AGAGGCATTTGCTTACAACA+GGG + chr4.1:15743093-15743112 MS.gene34892:CDS 40.0%
!! AGTGCTAAAAGACTTGTTGC+TGG + chr4.1:15743131-15743150 MS.gene34892:CDS 40.0%
!! CTTGTTGTCGCGTGATATTT+TGG + chr4.1:15746864-15746883 MS.gene34892:intron 40.0%
!! GATGAAGGCATCATATGTTG+TGG - chr4.1:15743560-15743579 None:intergenic 40.0%
!! GCGTGATATTTTGGATGACA+GGG + chr4.1:15746873-15746892 MS.gene34892:intron 40.0%
!! GGGTTCTAGATTCAGAACTT+TGG + chr4.1:15741561-15741580 MS.gene34892:CDS 40.0%
!! GTGGATTTGACTTGAGTTGT+AGG + chr4.1:15744604-15744623 MS.gene34892:intron 40.0%
!! TTTTCAGGAAGAGCAAAAGG+AGG + chr4.1:15742608-15742627 MS.gene34892:intron 40.0%
!!! ATGGTGCTTTTTTCTTTGGC+AGG + chr4.1:15743489-15743508 MS.gene34892:intron 40.0%
!!! ATTTGGCGTCTTTTTTCTCC+AGG + chr4.1:15743062-15743081 MS.gene34892:intron 40.0%
!!! CAGGATGCTTTTTGAAACAG+AGG + chr4.1:15743841-15743860 MS.gene34892:CDS 40.0%
AAGGGATGGGTGTTAATCCT+TGG + chr4.1:15745272-15745291 MS.gene34892:CDS 45.0%
AATAACTGGCATCAGTGACC+TGG + chr4.1:15744393-15744412 MS.gene34892:CDS 45.0%
AATGAGATGCTCCTGAAGAG+AGG - chr4.1:15746014-15746033 None:intergenic 45.0%
ACAGAACAAGGCAAGGAATG+TGG - chr4.1:15746746-15746765 None:intergenic 45.0%
ACCAACCACTTAACTGCCAA+AGG - chr4.1:15743216-15743235 None:intergenic 45.0%
ACCTTTGGCAGTTAAGTGGT+TGG + chr4.1:15743212-15743231 MS.gene34892:intron 45.0%
ACTCCAGAAAATGGAGGTCA+AGG + chr4.1:15746354-15746373 MS.gene34892:CDS 45.0%
AGATACCATTAGAGAGCCTC+TGG - chr4.1:15746996-15747015 None:intergenic 45.0%
AGGTTGCTGTATCTACCAAC+AGG + chr4.1:15742230-15742249 MS.gene34892:intron 45.0%
ATTAATGCTCGCAGGCTTGA+AGG + chr4.1:15745174-15745193 MS.gene34892:intron 45.0%
CAAGCCTGCGAGCATTAATT+GGG - chr4.1:15745173-15745192 None:intergenic 45.0%
CAAGTGATAGCATGCACTTG+GGG + chr4.1:15743588-15743607 MS.gene34892:CDS 45.0%
CACTTGTAAGACTGTTTGGG+AGG - chr4.1:15745027-15745046 None:intergenic 45.0%
CAGCCTTAACATACTTCGCT+AGG - chr4.1:15743787-15743806 None:intergenic 45.0%
CATCAAGATACTTTCCCCTC+AGG + chr4.1:15746918-15746937 MS.gene34892:CDS 45.0%
CCCTTAGGCTTAAAAGACCA+TGG + chr4.1:15744726-15744745 MS.gene34892:CDS 45.0%
CCTGAAATCAGCACATGGAT+CGG + chr4.1:15742111-15742130 MS.gene34892:intron 45.0%
CGGAGATGGATACATTGGAA+AGG - chr4.1:15744702-15744721 None:intergenic 45.0%
CGTGCAGTTGAAGATTGAAC+AGG - chr4.1:15745961-15745980 None:intergenic 45.0%
CGTGTGGTTTACTTTCCACA+AGG + chr4.1:15741629-15741648 MS.gene34892:CDS 45.0%
CTGAATCCTGGATTGACACA+CGG + chr4.1:15746306-15746325 MS.gene34892:CDS 45.0%
CTTGCAATCAACTCTTGAGC+AGG - chr4.1:15742877-15742896 None:intergenic 45.0%
CTTGTTTGTTTGCCAGCTGA+TGG + chr4.1:15741602-15741621 MS.gene34892:CDS 45.0%
CTTTCCGATTCAGGCAGATA+CGG + chr4.1:15742458-15742477 MS.gene34892:intron 45.0%
GATACCATTAGAGAGCCTCT+GGG - chr4.1:15746995-15747014 None:intergenic 45.0%
GATATCCAACGATCTTCCGA+AGG - chr4.1:15746562-15746581 None:intergenic 45.0%
GCAACCCATTGATGGAACAT+TGG - chr4.1:15743358-15743377 None:intergenic 45.0%
GCACAAACACTAACTGTTGC+AGG + chr4.1:15742052-15742071 MS.gene34892:intron 45.0%
GCATATCTTCCTGCAGAGTT+GGG + chr4.1:15742630-15742649 MS.gene34892:CDS 45.0%
GCCAATGTGAATTTGGCCAT+CGG - chr4.1:15744426-15744445 None:intergenic 45.0%
GCCATAGCTTGGTACATATC+TGG - chr4.1:15745337-15745356 None:intergenic 45.0%
GCCTTAACATACTTCGCTAG+GGG - chr4.1:15743785-15743804 None:intergenic 45.0%
GCTGTTGTGTAAAGTCCTGT+AGG - chr4.1:15742852-15742871 None:intergenic 45.0%
GGTATCTGTGATGACTACAC+TGG + chr4.1:15747009-15747028 MS.gene34892:CDS 45.0%
GGTTGCTGTATCTACCAACA+GGG + chr4.1:15742231-15742250 MS.gene34892:intron 45.0%
GTCAAGTGATAGCATGCACT+TGG + chr4.1:15743586-15743605 MS.gene34892:CDS 45.0%
GTTCGGATTGACACTGAGTT+TGG + chr4.1:15741841-15741860 MS.gene34892:intron 45.0%
GTTTACAAGTCAGGGTCCTT+CGG + chr4.1:15746543-15746562 MS.gene34892:CDS 45.0%
GTTTGAGCCTGAGATTGAGA+TGG - chr4.1:15745538-15745557 None:intergenic 45.0%
TCAAGCCTGCGAGCATTAAT+TGG - chr4.1:15745174-15745193 None:intergenic 45.0%
TCAGCATCCATCTCAATCTC+AGG + chr4.1:15745528-15745547 MS.gene34892:CDS 45.0%
TCAGCTGGCAAACAAACAAG+AGG - chr4.1:15741602-15741621 None:intergenic 45.0%
TCCCCTAGCGAAGTATGTTA+AGG + chr4.1:15743781-15743800 MS.gene34892:CDS 45.0%
TCCGATGGCCAAATTCACAT+TGG + chr4.1:15744422-15744441 MS.gene34892:CDS 45.0%
TGAACAGGAACCCAAGAGTT+TGG - chr4.1:15745946-15745965 None:intergenic 45.0%
TGGCTGCTGAAATTGAAGCA+AGG - chr4.1:15745416-15745435 None:intergenic 45.0%
TTAATCCTTGGATGCAGGCA+AGG + chr4.1:15745284-15745303 MS.gene34892:CDS 45.0%
TTCACATTGGCGTTCAGTGA+AGG + chr4.1:15744435-15744454 MS.gene34892:CDS 45.0%
! ACTTGAGTTGTAGGTTGGCT+GGG + chr4.1:15744613-15744632 MS.gene34892:intron 45.0%
! CAGGTGGCATCGTAATTTTC+TGG - chr4.1:15741915-15741934 None:intergenic 45.0%
! CTGCTCAAGAGTTGATTGCA+AGG + chr4.1:15742875-15742894 MS.gene34892:CDS 45.0%
! CTTTTAAGCCTAAGGGGGAA+CGG - chr4.1:15744722-15744741 None:intergenic 45.0%
! GAAGCAGGATGCTGTTTAGA+AGG - chr4.1:15745394-15745413 None:intergenic 45.0%
! GCAACCTAGAGTATCTCTGT+GGG + chr4.1:15744658-15744677 MS.gene34892:CDS 45.0%
! GCCATGGTCTTTTAAGCCTA+AGG - chr4.1:15744730-15744749 None:intergenic 45.0%
! GCTGATTCTTCTCTGAATCC+TGG + chr4.1:15746294-15746313 MS.gene34892:CDS 45.0%
! GGGATTTGCATGGTAATGAC+TGG + chr4.1:15742896-15742915 MS.gene34892:CDS 45.0%
! GGGCTAGCACTGAAATGTAA+GGG - chr4.1:15743746-15743765 None:intergenic 45.0%
! GTAGGGAGTGTGCTATAGAA+GGG + chr4.1:15746115-15746134 MS.gene34892:CDS 45.0%
! TTTCAGTTGGTATGCGCTTC+AGG + chr4.1:15743822-15743841 MS.gene34892:CDS 45.0%
!! CGATCCATGTGCTGATTTCA+GGG - chr4.1:15742113-15742132 None:intergenic 45.0%
!! CGCGTGATATTTTGGATGAC+AGG + chr4.1:15746872-15746891 MS.gene34892:intron 45.0%
!! GCTGTTTTCATACGCTATCC+CGG + chr4.1:15744935-15744954 MS.gene34892:intron 45.0%
!! GTTCAGAAGCTCTAGACCAT+TGG - chr4.1:15746962-15746981 None:intergenic 45.0%
!! TGGGCTAGCACTGAAATGTA+AGG - chr4.1:15743747-15743766 None:intergenic 45.0%
!!! GAAAGACTTTTTCAGCTGCC+CGG - chr4.1:15742743-15742762 None:intergenic 45.0%
!!! GGTAATGGCGTTTTGAGACA+TGG - chr4.1:15746079-15746098 None:intergenic 45.0%
AATGCACGCTTGGGCATTAG+AGG - chr4.1:15744265-15744284 None:intergenic 50.0%
ACACTCCCTACCAGGAAATG+GGG - chr4.1:15746106-15746125 None:intergenic 50.0%
ACCTGTTCACTGTGACCTTG+TGG - chr4.1:15741647-15741666 None:intergenic 50.0%
AGGAAATGGGGGCAAGGTAA+TGG - chr4.1:15746094-15746113 None:intergenic 50.0%
AGGGAGGGAGGTAGAGAATA+GGG - chr4.1:15742094-15742113 None:intergenic 50.0%
AGTGATACAAGCACTCACGG+AGG + chr4.1:15742702-15742721 MS.gene34892:CDS 50.0%
ATGAGTCTACAGCAGGTGAG+AGG + chr4.1:15744636-15744655 MS.gene34892:CDS 50.0%
ATGCACGCTTGGGCATTAGA+GGG - chr4.1:15744264-15744283 None:intergenic 50.0%
ATGCTCCTGAAGAGAGGAGA+GGG - chr4.1:15746008-15746027 None:intergenic 50.0%
ATTACCTTGCCCCCATTTCC+TGG + chr4.1:15746093-15746112 MS.gene34892:CDS 50.0%
CAACCCGTCGCTTGTATGTT+TGG - chr4.1:15741961-15741980 None:intergenic 50.0%
CAACTACCTTCTTGAGGTGG+AGG - chr4.1:15741243-15741262 None:intergenic 50.0%
CACACTCCCTACCAGGAAAT+GGG - chr4.1:15746107-15746126 None:intergenic 50.0%
CAGAGGAATCTAGTGTTCGG+CGG + chr4.1:15743858-15743877 MS.gene34892:CDS 50.0%
CAGCCACAGAATTTCCCCAA+TGG + chr4.1:15745430-15745449 MS.gene34892:CDS 50.0%
CTCGGGGTAGTTGGAGAATT+TGG - chr4.1:15746586-15746605 None:intergenic 50.0%
CTGCTGCACTTCAGGATATG+AGG + chr4.1:15745359-15745378 MS.gene34892:CDS 50.0%
CTTAAAAGACCATGGCCTCC+AGG + chr4.1:15744734-15744753 MS.gene34892:CDS 50.0%
GAACTTTGGCATGCTTGTGC+TGG + chr4.1:15741575-15741594 MS.gene34892:CDS 50.0%
GATGTTCTTCTCCTCGGTGA+TGG + chr4.1:15746702-15746721 MS.gene34892:CDS 50.0%
GCAATCAACTCTTGAGCAGG+AGG - chr4.1:15742874-15742893 None:intergenic 50.0%
GCAGCAATCTCAACCTCATC+AGG + chr4.1:15745483-15745502 MS.gene34892:CDS 50.0%
GCATGAATTCTCCCCTGTTG+TGG + chr4.1:15745209-15745228 MS.gene34892:CDS 50.0%
GCCAGTGATACAAGCACTCA+CGG + chr4.1:15742699-15742718 MS.gene34892:CDS 50.0%
GCTCGTATGTTTGGGCTTGA+AGG + chr4.1:15746621-15746640 MS.gene34892:CDS 50.0%
GGAACCCAAGAGTTTGGTCT+AGG - chr4.1:15745940-15745959 None:intergenic 50.0%
GGCATATCTTCCTGCAGAGT+TGG + chr4.1:15742629-15742648 MS.gene34892:CDS 50.0%
GGCATTTGCTTACAACAGGG+TGG + chr4.1:15743096-15743115 MS.gene34892:CDS 50.0%
GGGAACGGAGATGGATACAT+TGG - chr4.1:15744707-15744726 None:intergenic 50.0%
GGGTGTTAATCCTTGGATGC+AGG + chr4.1:15745279-15745298 MS.gene34892:CDS 50.0%
GGTTGATTGAGATGGAGGTG+CGG - chr4.1:15745785-15745804 None:intergenic 50.0%
GTCTCCGTATCTGCCTGAAT+CGG - chr4.1:15742465-15742484 None:intergenic 50.0%
GTGAACAGGTGAGTCAGACA+TGG + chr4.1:15741657-15741676 MS.gene34892:intron 50.0%
GTTTGGGCTTGAAGGTGAGT+TGG + chr4.1:15746629-15746648 MS.gene34892:CDS 50.0%
TAAGCAAATGCCTCTTCGGC+TGG - chr4.1:15743088-15743107 None:intergenic 50.0%
TCCACAAGGTCACAGTGAAC+AGG + chr4.1:15741643-15741662 MS.gene34892:CDS 50.0%
TCCGTGAGTGCTTGTATCAC+TGG - chr4.1:15742703-15742722 None:intergenic 50.0%
TCCTCCCAATTAATGCTCGC+AGG + chr4.1:15745166-15745185 MS.gene34892:intron 50.0%
TCTATAGCACACTCCCTACC+AGG - chr4.1:15746114-15746133 None:intergenic 50.0%
TGCCTCAAGTGGAGCAACTA+GGG + chr4.1:15746040-15746059 MS.gene34892:CDS 50.0%
TTCAGTCCTCCACCTCAAGA+AGG + chr4.1:15741234-15741253 MS.gene34892:CDS 50.0%
TTGGAGGACCCTGTAAGATC+AGG + chr4.1:15746648-15746667 MS.gene34892:CDS 50.0%
TTTCATACGCTATCCCGGAG+CGG + chr4.1:15744940-15744959 MS.gene34892:intron 50.0%
TTTCCATAAGCTCTCCGCTC+CGG - chr4.1:15744957-15744976 None:intergenic 50.0%
TTTGCAGTTCCCAACTCTGC+AGG - chr4.1:15742642-15742661 None:intergenic 50.0%
! AAGAAATGGCTTGCATGGGC+TGG - chr4.1:15745807-15745826 None:intergenic 50.0%
! AGAAATGGCTTGCATGGGCT+GGG - chr4.1:15745806-15745825 None:intergenic 50.0%
! AGCGAGCTTGCTCGTATGTT+TGG + chr4.1:15746612-15746631 MS.gene34892:CDS 50.0%
! ATAAGTTGGGGAGGCAAGCT+TGG - chr4.1:15742280-15742299 None:intergenic 50.0%
! ATGTGGAGTACTTACGGCCA+TGG - chr4.1:15746729-15746748 None:intergenic 50.0%
! CATTTGCTGCACTTCCTGAG+GGG - chr4.1:15746935-15746954 None:intergenic 50.0%
! CCATTTGCTGCACTTCCTGA+GGG - chr4.1:15746936-15746955 None:intergenic 50.0%
! CCTCAGGAAGTGCAGCAAAT+GGG + chr4.1:15746934-15746953 MS.gene34892:CDS 50.0%
! CTCAGGAAGTGCAGCAAATG+GGG + chr4.1:15746935-15746954 MS.gene34892:CDS 50.0%
! GACTTGAGTTGTAGGTTGGC+TGG + chr4.1:15744612-15744631 MS.gene34892:intron 50.0%
! GCGAGCTTGCTCGTATGTTT+GGG + chr4.1:15746613-15746632 MS.gene34892:CDS 50.0%
! GGCAACCTAGAGTATCTCTG+TGG + chr4.1:15744657-15744676 MS.gene34892:CDS 50.0%
! GGTAGGGAGTGTGCTATAGA+AGG + chr4.1:15746114-15746133 MS.gene34892:CDS 50.0%
!! ATGGGCTGGGTTGATTGAGA+TGG - chr4.1:15745793-15745812 None:intergenic 50.0%
!! CCATGTGCTGATTTCAGGGA+GGG - chr4.1:15742109-15742128 None:intergenic 50.0%
!! CCGATCCATGTGCTGATTTC+AGG - chr4.1:15742114-15742133 None:intergenic 50.0%
!! TCCATGTGCTGATTTCAGGG+AGG - chr4.1:15742110-15742129 None:intergenic 50.0%
AGACCCCACAGTTGTTAGCC+CGG - chr4.1:15747061-15747080 None:intergenic 55.0%
AGCTGCCAGCCTGATCTTAC+AGG - chr4.1:15746660-15746679 None:intergenic 55.0%
AGGACCCTGTAAGATCAGGC+TGG + chr4.1:15746652-15746671 MS.gene34892:CDS 55.0%
AGGGTCCTTCGGAAGATCGT+TGG + chr4.1:15746554-15746573 MS.gene34892:CDS 55.0%
AGGTTTCTCTGTTCCTCGCC+GGG + chr4.1:15742722-15742741 MS.gene34892:CDS 55.0%
ATCCATCTCCGTTCCCCCTT+AGG + chr4.1:15744711-15744730 MS.gene34892:CDS 55.0%
CACTCCCTACCAGGAAATGG+GGG - chr4.1:15746105-15746124 None:intergenic 55.0%
CAGGGAGGGAGGTAGAGAAT+AGG - chr4.1:15742095-15742114 None:intergenic 55.0%
CCAACCCAGAGGCTCTCTAA+TGG + chr4.1:15746988-15747007 MS.gene34892:CDS 55.0%
CCAGGACTGCCTTCATTCCA+TGG + chr4.1:15744752-15744771 MS.gene34892:CDS 55.0%
CCATGGAATGAAGGCAGTCC+TGG - chr4.1:15744755-15744774 None:intergenic 55.0%
CCATTAGAGAGCCTCTGGGT+TGG - chr4.1:15746991-15747010 None:intergenic 55.0%
CCCTCCCTGAAATCAGCACA+TGG + chr4.1:15742106-15742125 MS.gene34892:intron 55.0%
CTGCCTCAAGTGGAGCAACT+AGG + chr4.1:15746039-15746058 MS.gene34892:CDS 55.0%
CTTGCCCCCATTTCCTGGTA+GGG + chr4.1:15746098-15746117 MS.gene34892:CDS 55.0%
GAGGTTTCTCTGTTCCTCGC+CGG + chr4.1:15742721-15742740 MS.gene34892:CDS 55.0%
GATGCTCCTGAAGAGAGGAG+AGG - chr4.1:15746009-15746028 None:intergenic 55.0%
GCACACTCCCTACCAGGAAA+TGG - chr4.1:15746108-15746127 None:intergenic 55.0%
GCCTGCGAGCATTAATTGGG+AGG - chr4.1:15745170-15745189 None:intergenic 55.0%
GCTGATGCTGAAGAAGCTGC+TGG - chr4.1:15745570-15745589 None:intergenic 55.0%
GCTGCCAGCCTGATCTTACA+GGG - chr4.1:15746659-15746678 None:intergenic 55.0%
GGAATCTAGTGTTCGGCGGT+AGG + chr4.1:15743862-15743881 MS.gene34892:intron 55.0%
GGCTTCGAGACGCAGATAGA+GGG + chr4.1:15745230-15745249 MS.gene34892:CDS 55.0%
GGGGAGGCAAGCTTGGATTT+GGG - chr4.1:15742273-15742292 None:intergenic 55.0%
GTGACCTGGATTCTGTCCGA+TGG + chr4.1:15744407-15744426 MS.gene34892:CDS 55.0%
GTGCAGCAAATGGGGACCAA+TGG + chr4.1:15746943-15746962 MS.gene34892:CDS 55.0%
TATGGCAGCTGCTGCACTTC+AGG + chr4.1:15745351-15745370 MS.gene34892:CDS 55.0%
TCCACTGCAACACGCTTGGA+AGG - chr4.1:15745985-15746004 None:intergenic 55.0%
TGAACTCAGCTCCAACCCAG+AGG + chr4.1:15746977-15746996 MS.gene34892:CDS 55.0%
TGATGACTACACTGGCCGTG+AGG + chr4.1:15747017-15747036 MS.gene34892:CDS 55.0%
TGCCCTAGTTGCTCCACTTG+AGG - chr4.1:15746045-15746064 None:intergenic 55.0%
TGCGTCTCGAAGCCACAACA+GGG - chr4.1:15745224-15745243 None:intergenic 55.0%
TGGAATGAAGGCAGTCCTGG+AGG - chr4.1:15744752-15744771 None:intergenic 55.0%
TGGCTTCGAGACGCAGATAG+AGG + chr4.1:15745229-15745248 MS.gene34892:CDS 55.0%
TGGGGAGGCAAGCTTGGATT+TGG - chr4.1:15742274-15742293 None:intergenic 55.0%
TTCCATAAGCTCTCCGCTCC+GGG - chr4.1:15744956-15744975 None:intergenic 55.0%
TTGGCCATCGGACAGAATCC+AGG - chr4.1:15744414-15744433 None:intergenic 55.0%
! AGCACCGGGCTAACAACTGT+GGG + chr4.1:15747054-15747073 MS.gene34892:CDS 55.0%
! CCCATTTGCTGCACTTCCTG+AGG - chr4.1:15746937-15746956 None:intergenic 55.0%
! CCCTCAGGAAGTGCAGCAAA+TGG + chr4.1:15746933-15746952 MS.gene34892:CDS 55.0%
! TGGGCTTGAAGGTGAGTTGG+AGG + chr4.1:15746632-15746651 MS.gene34892:CDS 55.0%
! TTCTCCTCGGTGATGGTCCA+TGG + chr4.1:15746709-15746728 MS.gene34892:CDS 55.0%
!! AAGCACCGGGCTAACAACTG+TGG + chr4.1:15747053-15747072 MS.gene34892:CDS 55.0%
!! GGCTGGGTTGATTGAGATGG+AGG - chr4.1:15745790-15745809 None:intergenic 55.0%
!! TGTGCTGATTTCAGGGAGGG+AGG - chr4.1:15742106-15742125 None:intergenic 55.0%
ACCACACGGCTTCCATCAGC+TGG - chr4.1:15741617-15741636 None:intergenic 60.0%
AGCAAGCTCGCTGCGTAGCT+CGG - chr4.1:15746604-15746623 None:intergenic 60.0%
AGCCTAAGGGGGAACGGAGA+TGG - chr4.1:15744716-15744735 None:intergenic 60.0%
AGGGTCCACTGCAACACGCT+TGG - chr4.1:15745989-15746008 None:intergenic 60.0%
ATCCCGGAGCGGAGAGCTTA+TGG + chr4.1:15744951-15744970 MS.gene34892:intron 60.0%
CCTACCAGGAAATGGGGGCA+AGG - chr4.1:15746100-15746119 None:intergenic 60.0%
CCTGGATTGACACACGGCGT+CGG + chr4.1:15746312-15746331 MS.gene34892:CDS 60.0%
CCTTGCCCCCATTTCCTGGT+AGG + chr4.1:15746097-15746116 MS.gene34892:CDS 60.0%
CTGCGTCTCGAAGCCACAAC+AGG - chr4.1:15745225-15745244 None:intergenic 60.0%
GCACCGGGCTAACAACTGTG+GGG + chr4.1:15747055-15747074 MS.gene34892:CDS 60.0%
GCCTTCCAAGCGTGTTGCAG+TGG + chr4.1:15745981-15746000 MS.gene34892:CDS 60.0%
GCGTCTCGAAGCCACAACAG+GGG - chr4.1:15745223-15745242 None:intergenic 60.0%
GGCTGGGATGAGTCTACAGC+AGG + chr4.1:15744629-15744648 MS.gene34892:CDS 60.0%
GTGCAGCAGCTGCCATAGCT+TGG - chr4.1:15745348-15745367 None:intergenic 60.0%
GTGGACCCTCTCCTCTCTTC+AGG + chr4.1:15746000-15746019 MS.gene34892:CDS 60.0%
TCGAGCCTTGCCTGCATCCA+AGG - chr4.1:15745292-15745311 None:intergenic 60.0%
TTTCTCCAGGCCAGCCGAAG+AGG + chr4.1:15743075-15743094 MS.gene34892:intron 60.0%
! AAATGCCTCTTCGGCTGGCC+TGG - chr4.1:15743083-15743102 None:intergenic 60.0%
!!! ACTTTTTCAGCTGCCCGGCG+AGG - chr4.1:15742738-15742757 None:intergenic 60.0%
ACGGCCATGGACCATCACCG+AGG - chr4.1:15746716-15746735 None:intergenic 65.0%
CAAGCTCGCTGCGTAGCTCG+GGG - chr4.1:15746602-15746621 None:intergenic 65.0%
CCGACGCCGTGTGTCAATCC+AGG - chr4.1:15746315-15746334 None:intergenic 65.0%
GAAGGCAGTCCTGGAGGCCA+TGG - chr4.1:15744746-15744765 None:intergenic 65.0%
GCAAGCTCGCTGCGTAGCTC+GGG - chr4.1:15746603-15746622 None:intergenic 65.0%
GCCAGCTGATGGAAGCCGTG+TGG + chr4.1:15741613-15741632 MS.gene34892:CDS 65.0%
GCTGCGTAGCTCGGGGTAGT+TGG - chr4.1:15746595-15746614 None:intergenic 65.0%
!! ACACACGGCGTCGGTGAGTC+GGG + chr4.1:15746321-15746340 MS.gene34892:CDS 65.0%
!! GACACACGGCGTCGGTGAGT+CGG + chr4.1:15746320-15746339 MS.gene34892:CDS 65.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 15741213 15747092 15741213 ID=MS.gene34892
chr4.1 mRNA 15741213 15747092 15741213 ID=MS.gene34892.t1;Parent=MS.gene34892
chr4.1 exon 15741213 15741255 15741213 ID=MS.gene34892.t1.exon1;Parent=MS.gene34892.t1
chr4.1 CDS 15741213 15741255 15741213 ID=cds.MS.gene34892.t1;Parent=MS.gene34892.t1
chr4.1 exon 15741552 15741664 15741552 ID=MS.gene34892.t1.exon2;Parent=MS.gene34892.t1
chr4.1 CDS 15741552 15741664 15741552 ID=cds.MS.gene34892.t1;Parent=MS.gene34892.t1
chr4.1 exon 15742232 15742327 15742232 ID=MS.gene34892.t1.exon3;Parent=MS.gene34892.t1
chr4.1 CDS 15742232 15742327 15742232 ID=cds.MS.gene34892.t1;Parent=MS.gene34892.t1
chr4.1 exon 15742471 15742527 15742471 ID=MS.gene34892.t1.exon4;Parent=MS.gene34892.t1
chr4.1 CDS 15742471 15742527 15742471 ID=cds.MS.gene34892.t1;Parent=MS.gene34892.t1
chr4.1 exon 15742615 15742770 15742615 ID=MS.gene34892.t1.exon5;Parent=MS.gene34892.t1
chr4.1 CDS 15742615 15742770 15742615 ID=cds.MS.gene34892.t1;Parent=MS.gene34892.t1
chr4.1 exon 15742856 15742940 15742856 ID=MS.gene34892.t1.exon6;Parent=MS.gene34892.t1
chr4.1 CDS 15742856 15742940 15742856 ID=cds.MS.gene34892.t1;Parent=MS.gene34892.t1
chr4.1 exon 15743084 15743174 15743084 ID=MS.gene34892.t1.exon7;Parent=MS.gene34892.t1
chr4.1 CDS 15743084 15743174 15743084 ID=cds.MS.gene34892.t1;Parent=MS.gene34892.t1
chr4.1 exon 15743511 15743675 15743511 ID=MS.gene34892.t1.exon8;Parent=MS.gene34892.t1
chr4.1 CDS 15743511 15743675 15743511 ID=cds.MS.gene34892.t1;Parent=MS.gene34892.t1
chr4.1 exon 15743757 15743879 15743757 ID=MS.gene34892.t1.exon9;Parent=MS.gene34892.t1
chr4.1 CDS 15743757 15743879 15743757 ID=cds.MS.gene34892.t1;Parent=MS.gene34892.t1
chr4.1 exon 15744381 15744456 15744381 ID=MS.gene34892.t1.exon10;Parent=MS.gene34892.t1
chr4.1 CDS 15744381 15744456 15744381 ID=cds.MS.gene34892.t1;Parent=MS.gene34892.t1
chr4.1 exon 15744626 15744773 15744626 ID=MS.gene34892.t1.exon11;Parent=MS.gene34892.t1
chr4.1 CDS 15744626 15744773 15744626 ID=cds.MS.gene34892.t1;Parent=MS.gene34892.t1
chr4.1 exon 15745188 15746404 15745188 ID=MS.gene34892.t1.exon12;Parent=MS.gene34892.t1
chr4.1 CDS 15745188 15746404 15745188 ID=cds.MS.gene34892.t1;Parent=MS.gene34892.t1
chr4.1 exon 15746543 15746733 15746543 ID=MS.gene34892.t1.exon13;Parent=MS.gene34892.t1
chr4.1 CDS 15746543 15746733 15746543 ID=cds.MS.gene34892.t1;Parent=MS.gene34892.t1
chr4.1 exon 15746894 15747092 15746894 ID=MS.gene34892.t1.exon14;Parent=MS.gene34892.t1
chr4.1 CDS 15746894 15747092 15746894 ID=cds.MS.gene34892.t1;Parent=MS.gene34892.t1
Gene Sequence

>MS.gene34892

ATGAAGCTTTCTTCAGCTGGGTTCAGTCCTCCACCTCAAGAAGGTAGTTGAATTTCTGTTTGCAATTGCTTACTCTTCTTCCATTTCACTTTCTCAATCCTTTTTGGTAACAATTTTTTTTCATTTTGGGGATTAGAATGTTCTATTCATCTTTTAGATTTAGATGATTGCTGAGGATATTAATTTGTATGTCTAATAATATGGTGGTGTTACTTTGTTGTTTTAAGATCTTGATCTTGCTAAGAACTTGCCAAAGTTCCTTTATCATTTGTGGGTTTAAGGTGGGAGTTATGAAGTTTCTGTTTCATATTGATGACATTAGGATGCATTTTTTTGTAGGAGAAAAGCGGGTTCTAGATTCAGAACTTTGGCATGCTTGTGCTGGTCCTCTTGTTTGTTTGCCAGCTGATGGAAGCCGTGTGGTTTACTTTCCACAAGGTCACAGTGAACAGGTGAGTCAGACATGGTGTGAGATTCTCTAGATTGCTCCTAGAGAAAAATCACTGTTGAAGCTCTCTCAATACTTGTTTTTCAAACCATGGTGTGTTAAAAAATAATAATAATAATTGGTTCCTTTTTCATGTCTTCGATTTGTGTCTTTGTGATGCAATGGGCTGCTAATTTGTATGTTCGGATTGACACTGAGTTTGGCAGAATTACGGTGCGCCTGATTTTAGCAAAAGCTACACTTTGAAGTTACCAGAAAATTACGATGCCACCTGATTTTGTCAAATTGGCCTTGATTCCAAACATACAAGCGACGGGTTGTAATAAGAAAACTGACTTTATGCTTCCACTAAAATGACCCGTGTTTATACTAATGCTTAACATACTCCTAAGCACAAACACTAACTGTTGCAGGTTAATGAATTGACTTTCCCTATTCTCTACCTCCCTCCCTGAAATCAGCACATGGATCGGCTTTTTATGTGTTTGATTTGTGTCTGTGAAAACTTATATGTTCTTTTTCTGCATAAACTATGTGCATAAATGATCTAAATCTGCAATTTTCTGCTCAGGTTGCTGTATCTACCAACAGGGAAGTTGATACTTATATCCCAAATCCAAGCTTGCCTCCCCAACTTATTTGTCAACTTCATAATCTGACTATGCATGTAAGGCTTGTTTATTCATTTATTTAATCTTTTACAGTGATAAGACTTTTTTTTTTTTTTTTGTTTCCTTGTTTCATACTCTCACATATTCTTGTTCCAGCACTCTTTTTCCTTAACAATTTGTTCATTTCTTTCCGATTCAGGCAGATACGGAGACAGATGAAGTGTATGCACAGATGACCTTGCAACCTTTAAATCCTGTATGATTCCATTTCTTAACTGAAACCAGATATTTGGACTATGGCTACATTCAACTTTTTAACTTTTGGCTATTACAATGTTTTCAGGAAGAGCAAAAGGAGGCATATCTTCCTGCAGAGTTGGGAACTGCAAATAAACAGCCAACAAACTACTTTTGCAAAATTTTGACAGCCAGTGATACAAGCACTCACGGAGGTTTCTCTGTTCCTCGCCGGGCAGCTGAAAAAGTCTTTCCTCCATTGGTAACATTTGTCACTGTTGTGCTGTAAATAGTAGTCAACATGTTCATAAAATCTTTTAACTTGACTTCATAATTATGACCTACAGGACTTTACACAACAGCCTCCTGCTCAAGAGTTGATTGCAAGGGATTTGCATGGTAATGACTGGAAATTCAAACATATCTTCCGTGGTAAGTTATAAATCTGAGATTCAACAGCCTCTTATTTTTTATTTTTTTACTTCAATTAGAAGCTTTTCATGTTTATTACTTGGTGGTGAAAATAAGTTCACATTCCATTTATAAGGTTTAAATTTGGCGTCTTTTTTCTCCAGGCCAGCCGAAGAGGCATTTGCTTACAACAGGGTGGAGTGTCTTTGTGAGTGCTAAAAGACTTGTTGCTGGTGATTCAGTGCTGTTTATATGGTAAGTAGTTTTTTTTAGCATGTATGTCTGAAATTTAACCTTTGGCAGTTAAGTGGTTGGTTGACTTGTTTCAGCTCTGAAACAGATCATGTAAATTTGTAATTCATTTTGCCATTCAGAAGAATATAGGATAAGTCTTATTATGACATTTTATGTGTATGTTTATGTTCATATGTTGATCCAATGTTCCATCAATGGGTTGCAAATTGCAACTGTAGTGTGGTTGCATTTGTTTTTCTTAGTTTTTCTAATCTAGGCTTTATGATTTTTTGTGAAGCATAGTTAATTGTGATATTATATAATTGGTGTGATTTATGGTGCTTTTTTCTTTGGCAGGAATGAAAAAAATCAGTTGCTTCTAGGTATTCGGCGTGCTAGTCGACCACAACATATGATGCCTTCATCAGTGTTGTCAAGTGATAGCATGCACTTGGGGCTGCTTGCTGCTGCAGCTCATGCAGCTGCAACAAACAGTCGTTTCACCATTTTCTATAACCCACGGTATACCTATCATATATTTCTATTAGTTCCAAGTTAGAATATGGCTACTTAAACTGACATTTTTTTTCCCTTACATTTCAGTGCTAGCCCATCAGAATTTGTCATTCCCCTAGCGAAGTATGTTAAGGCTGTATATCATACTCGAGTTTCAGTTGGTATGCGCTTCAGGATGCTTTTTGAAACAGAGGAATCTAGTGTTCGGCGGTAGGTTTCTTATAATTGTTGAAAATGATAGTGGAAATGTTTTTTTTTCTTATGTTTGAAATGTTGGTTAATGGAGCTAATATGCAATATCATTTATTAAAATCAACATGATTTACTTTTCCAAGTTATCATAAGTCATAGCCTAATTTAATAGAAAAATTCTTGTGCTTGTCACAAGTATAGACTACACTACGTTACTCAAATTCAATTCAGGATATGGAATTACGGACACATATTTACTCATTTATCTAGACGTGTCATAAATGGATTGCTTGCACGCTAGTTTACCTTTTGACTCAAATTTAGTCTTTGTAATGATGTTCAATAATTTGTTCTAGTGAGATAAAGTAAGAATATGGATATTAATATATACATATTCTACCCTCTAATGCCCAAGCGTGCATTCTATAAAGATATGATTAAATTCATCATTGAGTGGATAGATATTGTCAGTCACACGTTGGGGATGTTTGTTTGTGATATTAATACATTCTCATGCAGATACATGGGAACAATAACTGGCATCAGTGACCTGGATTCTGTCCGATGGCCAAATTCACATTGGCGTTCAGTGAAGGTATGTATTGGATCCTTTATAATATATTTCATTGATGTTATATAAACATTAAATTGAATGCTGTTTGTATCTCCAAACAAAACATCAATAATATCTTGCTTCGGAAAAAATTATGTCTTATTGAGAATTGAATAAACATTTTTAATTGTGGATTTGACTTGAGTTGTAGGTTGGCTGGGATGAGTCTACAGCAGGTGAGAGGCAACCTAGAGTATCTCTGTGGGAAATTGAGCCATTAACAACCTTTCCAATGTATCCATCTCCGTTCCCCCTTAGGCTTAAAAGACCATGGCCTCCAGGACTGCCTTCATTCCATGGTATGTATATTGCCACATTTAAGCCAAAAAATATTTAAGAACTTTTCTTACTATTTAGGCTCTGTTTGGATAAACTTAATTACATGCTTATAGCATAATGTATAAGCTATTTCTTTAACTAAAGATAAAATGAAGTCAAACTGTTATCGTAGAAGCTATAAGCTGTTTTCATACGCTATCCCGGAGCGGAGAGCTTATGGAAATAAGCTGAAAACAACTCATGGACATGTCATAAACTATTTCTTCAAACCCTCCCAAACAGTCTTACAAGTGCATGTGCCAGTAGATAAGCTCAAATATGTAAATCCTAGCAGACCATAATCAATTAATCTAGCTTTAACTTTCAAAATGCTGACATTTATTCCTTTTACTAATCTACTTATTCTCACTGATCCTCCCAATTAATGCTCGCAGGCTTGAAGGATGATGATTTTGGCATGAATTCTCCCCTGTTGTGGCTTCGAGACGCAGATAGAGGGCTTCAGACTCTTAATTTTCAAGGGATGGGTGTTAATCCTTGGATGCAGGCAAGGCTCGATCCATCCATTATGAATTTGCAACCAGATATGTACCAAGCTATGGCAGCTGCTGCACTTCAGGATATGAGGACTTTAGATCCTTCTAAACAGCATCCTGCTTCCTTGCTTCAATTTCAGCAGCCACAGAATTTCCCCAATGGTAATGCTGCTTTAATGCAGAATCAGATGTTGCAGCAATCTCAACCTCATCAGGCTTTTCCAAAGAATCAAGAAAGTCAGCATCCATCTCAATCTCAGGCTCAAACACAACAATTCCAGCAGCTTCTTCAGCATCAGCCCTCATTCACTAATCAAAATTATCATCAGCAGCAGCAACAACAGCAGCAGCAACAGCAGCAGCAACATCAGCAGCAACATCAGCAGCAGCAGCAACAACAACAGCTGCAACAACAACAATCACAACAGCAACAACAAGTTGTAGATCATCAACAGATGTCAAATGCCGTCTCCACAATGTCTCAGTTTGTTTCCGCACCTCCATCTCAATCAACCCAGCCCATGCAAGCCATTTCTTCAATTGGCCATCAACAAAACTTTTCGGACTCAAATGGGAACCCAGTTTCTCCTTTGCACAATATGTTAGGTTCATTTTCCAATGACGAAACATCTCACCTTCTCAACTTTCCTAGACCAAACTCTTGGGTTCCTGTTCAATCTTCAACTGCACGGCCTTCCAAGCGTGTTGCAGTGGACCCTCTCCTCTCTTCAGGAGCATCTCATTATGTTCTGCCTCAAGTGGAGCAACTAGGGCAGTCACAGACTACCATGTCTCAAAACGCCATTACCTTGCCCCCATTTCCTGGTAGGGAGTGTGCTATAGAAGGGAACACCGATCCACAAAACCATCTTTTGTTTGGTTTTAACATAGAGCCCTCATCACATCTAGTTTACAATGAGATGTCTAACCTTAAGAGGGTCAATAGCAACTGTGACTCATCAACTGCACCTTTTCAATCTTCCACCTACTTGAATACAACAGGTGCTGATTCTTCTCTGAATCCTGGATTGACACACGGCGTCGGTGAGTCGGGCTTCATGCAAACTCCAGAAAATGGAGGTCAAGGAAACCCACAAAACAAAACCTTTGTGAAGGTGAGCTTTTTATGCTGGGACTAATATCTTTCGAACCAACATCTTGATTTTCACTCTTTTGCCACGTTGCGTTTCACAAAAGTTTACTTATTGTAAGTACTGCATTTTTACATGATAATTTAATCTCTCTATTCGCAGGTTTACAAGTCAGGGTCCTTCGGAAGATCGTTGGATATCACCAAATTCTCCAACTACCCCGAGCTACGCAGCGAGCTTGCTCGTATGTTTGGGCTTGAAGGTGAGTTGGAGGACCCTGTAAGATCAGGCTGGCAGCTTGTATTTGTTGATCAAGAGAATGATGTTCTTCTCCTCGGTGATGGTCCATGGCCGTAAGTACTCCACATTCCTTGCCTTGTTCTGTGTTTAATTTTTTAATAATGAAAGAGATAAATTGGAGAATCTATTTTCAATCGAATGGTAGTTTTATTAACCACTGAATTACATAAACGTCGTTGTTAACTTGTTGTCGCGTGATATTTTGGATGACAGGGAATTTGTAAATAGTGTATGGTGCATCAAGATACTTTCCCCTCAGGAAGTGCAGCAAATGGGGACCAATGGTCTAGAGCTTCTGAACTCAGCTCCAACCCAGAGGCTCTCTAATGGTATCTGTGATGACTACACTGGCCGTGAGGACTCAAGAAATTTAAGCACCGGGCTAACAACTGTGGGGTCTTTAGACTACTGA
Protein sequence

>MS.gene34892.t1

MKLSSAGFSPPPQEGEKRVLDSELWHACAGPLVCLPADGSRVVYFPQGHSEQVAVSTNREVDTYIPNPSLPPQLICQLHNLTMHADTETDEVYAQMTLQPLNPEEQKEAYLPAELGTANKQPTNYFCKILTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHGNDWKFKHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQHMMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGLKDDDFGMNSPLLWLRDADRGLQTLNFQGMGVNPWMQARLDPSIMNLQPDMYQAMAAAALQDMRTLDPSKQHPASLLQFQQPQNFPNGNAALMQNQMLQQSQPHQAFPKNQESQHPSQSQAQTQQFQQLLQHQPSFTNQNYHQQQQQQQQQQQQQHQQQHQQQQQQQQLQQQQSQQQQQVVDHQQMSNAVSTMSQFVSAPPSQSTQPMQAISSIGHQQNFSDSNGNPVSPLHNMLGSFSNDETSHLLNFPRPNSWVPVQSSTARPSKRVAVDPLLSSGASHYVLPQVEQLGQSQTTMSQNAITLPPFPGRECAIEGNTDPQNHLLFGFNIEPSSHLVYNEMSNLKRVNSNCDSSTAPFQSSTYLNTTGADSSLNPGLTHGVGESGFMQTPENGGQGNPQNKTFVKVYKSGSFGRSLDITKFSNYPELRSELARMFGLEGELEDPVRSGWQLVFVDQENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQMGTNGLELLNSAPTQRLSNGICDDYTGREDSRNLSTGLTTVGSLDY