AlfalfaGEDB | MS.gene053501

M. sativa cultivar XinJiangDaYe / MS.gene053501

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF00847.23

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053501.t1	KEH30912.1	82.7	214	24	5	1	207	1	208	8.20E-86	326.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053501.t1	Q9SZ06	47.7	172	51	3	10	142	24	195	3.4e-32	139.8

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053501.t1	A0A072UMM6	82.7	214	24	5	1	207	1	208	5.9e-86	326.6

TFs/TRs:

Gene ID	Type	Classification
MS.gene053501.t1	TF	AP2/ERF-ERF

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene051837	MS.gene053501	0.804443	2.15E-49	-1.69E-46
MS.gene053499	MS.gene053501	0.826437	2.71E-54	-1.69E-46
MS.gene053501	MS.gene057432	0.803019	4.26E-49	-1.69E-46
MS.gene053501	MS.gene072829	0.819715	1.00E-52	-1.69E-46
MS.gene053501	MS.gene24856	0.804403	2.20E-49	-1.69E-46
MS.gene053501	MS.gene26630	0.804415	2.18E-49	-1.69E-46
MS.gene053501	MS.gene26632	0.851736	7.31E-61	-1.69E-46
MS.gene053501	MS.gene35487	0.817806	2.72E-52	-1.69E-46
MS.gene053501	MS.gene39643	0.804704	1.90E-49	-1.69E-46
MS.gene053501	MS.gene39645	0.84228	2.85E-58	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053501.t1	MTR_4g086165	85.981	214	17	5	1	207	1	208	2.23e-123	347
MS.gene053501.t1	MTR_4g086190	71.795	234	35	9	1	207	1	230	2.15e-96	280
MS.gene053501.t1	MTR_4g086160	72.124	226	30	9	9	207	12	231	1.05e-95	278
MS.gene053501.t1	MTR_4g086220	70.886	237	34	10	1	207	3	234	3.28e-91	267
MS.gene053501.t1	MTR_7g020980	46.281	121	51	1	19	139	1	107	1.55e-30	110
MS.gene053501.t1	MTR_2g435590	76.562	64	15	0	76	139	89	152	8.77e-30	111
MS.gene053501.t1	MTR_7g021010	72.308	65	18	0	75	139	43	107	1.08e-29	108
MS.gene053501.t1	MTR_8g022820	52.830	106	45	2	69	172	110	212	3.47e-29	112
MS.gene053501.t1	MTR_8g022820	52.830	106	45	2	69	172	110	212	3.47e-29	112
MS.gene053501.t1	MTR_8g022820	52.830	106	45	2	69	172	109	211	3.60e-29	112
MS.gene053501.t1	MTR_7g021010	75.410	61	15	0	79	139	8	68	4.02e-29	105
MS.gene053501.t1	MTR_2g105380	55.556	99	39	2	69	165	103	198	5.61e-29	111
MS.gene053501.t1	MTR_1g087920	68.000	75	21	1	69	143	66	137	2.25e-28	108
MS.gene053501.t1	MTR_8g092460	79.310	58	12	0	82	139	144	201	4.87e-28	107
MS.gene053501.t1	MTR_1g070070	70.833	72	20	1	69	139	7	78	4.16e-27	101
MS.gene053501.t1	MTR_5g009620	82.456	57	10	0	82	138	111	167	4.71e-27	105
MS.gene053501.t1	MTR_2g014340	67.647	68	22	0	79	146	15	82	5.56e-27	102
MS.gene053501.t1	MTR_4g078710	70.312	64	19	0	83	146	28	91	1.97e-26	101
MS.gene053501.t1	MTR_2g078680	60.465	86	29	2	54	139	7	87	8.00e-26	99.4
MS.gene053501.t1	MTR_3g090760	76.190	63	13	1	78	138	106	168	1.59e-25	101
MS.gene053501.t1	MTR_3g053690	70.968	62	18	0	79	140	23	84	2.40e-25	98.6
MS.gene053501.t1	MTR_4g100420	61.364	88	29	2	68	150	142	229	5.77e-25	99.4
MS.gene053501.t1	MTR_4g100450	66.216	74	24	1	68	140	139	212	7.71e-25	99.0
MS.gene053501.t1	MTR_4g100380	48.673	113	55	2	29	140	93	203	9.48e-25	98.2
MS.gene053501.t1	MTR_5g085100	65.672	67	23	0	79	145	42	108	1.00e-24	98.6
MS.gene053501.t1	MTR_1g028560	62.651	83	29	1	82	162	114	196	1.84e-24	99.0
MS.gene053501.t1	MTR_3g102100	41.600	125	55	3	50	172	12	120	5.54e-24	93.6
MS.gene053501.t1	MTR_3g098580	44.853	136	52	2	5	139	19	132	6.48e-24	95.9
MS.gene053501.t1	MTR_7g096700	66.667	72	23	1	69	139	6	77	1.43e-23	92.0
MS.gene053501.t1	MTR_2g015040	47.525	101	43	2	49	139	20	120	1.50e-23	92.0
MS.gene053501.t1	MTR_8g006840	64.286	70	23	2	83	150	125	194	1.63e-23	93.2
MS.gene053501.t1	MTR_7g081815	59.740	77	30	1	82	157	60	136	2.31e-23	93.2
MS.gene053501.t1	MTR_5g085070	62.687	67	25	0	79	145	47	113	2.33e-23	94.7
MS.gene053501.t1	MTR_5g083340	64.789	71	23	1	81	151	83	151	3.13e-23	96.3
MS.gene053501.t1	MTR_8g102800	45.545	101	52	2	50	147	1	101	3.23e-23	93.2
MS.gene053501.t1	MTR_7g081805	59.740	77	30	1	82	157	60	136	5.38e-23	92.0
MS.gene053501.t1	MTR_4g088005	66.129	62	20	1	79	139	53	114	7.14e-23	89.4
MS.gene053501.t1	MTR_8g099215	67.164	67	19	1	75	138	96	162	9.48e-23	93.6
MS.gene053501.t1	MTR_5g075570	51.765	85	41	0	79	163	120	204	1.17e-22	92.8
MS.gene053501.t1	MTR_8g006825	56.790	81	29	2	82	161	95	170	1.41e-22	90.9
MS.gene053501.t1	MTR_1g048610	69.355	62	18	1	80	140	86	147	1.57e-22	91.7
MS.gene053501.t1	MTR_1g074310	59.740	77	24	2	70	139	2	78	1.71e-22	89.0
MS.gene053501.t1	MTR_7g096750	72.581	62	16	1	79	139	16	77	1.87e-22	89.0
MS.gene053501.t1	MTR_2g015050	61.972	71	24	2	71	140	124	192	2.20e-22	92.0
MS.gene053501.t1	MTR_1g090290	59.155	71	28	1	71	140	101	171	2.89e-22	90.1
MS.gene053501.t1	MTR_7g081795	67.797	59	18	1	82	139	59	117	2.91e-22	90.1
MS.gene053501.t1	MTR_8g006815	58.571	70	27	2	82	149	95	164	3.73e-22	89.7
MS.gene053501.t1	MTR_4g054740	49.057	106	41	4	68	164	86	187	4.24e-22	90.5
MS.gene053501.t1	MTR_7g046260	48.387	93	42	2	71	157	44	136	4.84e-22	90.1
MS.gene053501.t1	MTR_4g010640	65.625	64	22	0	79	142	3	66	5.26e-22	89.7
MS.gene053501.t1	MTR_2g014300	65.574	61	21	0	79	139	11	71	9.01e-22	88.2
MS.gene053501.t1	MTR_1g074230	72.131	61	16	1	80	139	16	76	9.65e-22	87.0
MS.gene053501.t1	MTR_2g101340	46.237	93	42	2	73	157	24	116	1.05e-21	88.6
MS.gene053501.t1	MTR_8g090350	70.175	57	17	0	83	139	113	169	1.22e-21	90.1
MS.gene053501.t1	MTR_4g114570	61.194	67	26	0	78	144	2	68	1.46e-21	88.6
MS.gene053501.t1	MTR_3g110205	38.462	130	70	3	78	200	38	164	2.49e-21	87.4
MS.gene053501.t1	MTR_5g082950	68.852	61	17	1	80	138	61	121	2.52e-21	90.1
MS.gene053501.t1	MTR_2g438180	69.492	59	17	1	82	139	13	71	2.80e-21	85.5
MS.gene053501.t1	MTR_6g088405	54.054	74	33	1	83	155	44	117	3.74e-21	87.4
MS.gene053501.t1	MTR_3g074130	70.175	57	17	0	83	139	150	206	4.10e-21	89.7
MS.gene053501.t1	MTR_7g092190	65.517	58	20	0	82	139	29	86	4.75e-21	88.6
MS.gene053501.t1	MTR_2g089170	67.797	59	19	0	83	141	65	123	5.27e-21	86.3
MS.gene053501.t1	MTR_4g008860	63.793	58	21	0	82	139	7	64	5.90e-21	86.7
MS.gene053501.t1	MTR_4g100650	50.000	82	40	1	77	157	68	149	6.73e-21	87.8
MS.gene053501.t1	MTR_4g054360	60.526	76	27	2	83	155	124	199	7.73e-21	87.8
MS.gene053501.t1	MTR_1g069985	57.500	80	31	2	70	146	62	141	7.99e-21	86.7
MS.gene053501.t1	MTR_3g095190	55.140	107	45	2	35	139	121	226	1.14e-20	88.6
MS.gene053501.t1	MTR_2g019750	55.072	69	31	0	70	138	37	105	1.30e-20	87.8
MS.gene053501.t1	MTR_5g062700	61.644	73	27	1	68	139	157	229	1.39e-20	88.6
MS.gene053501.t1	MTR_8g013860	55.072	69	31	0	79	147	43	111	1.43e-20	85.5
MS.gene053501.t1	MTR_2g103700	63.934	61	22	0	80	140	4	64	1.76e-20	84.7
MS.gene053501.t1	MTR_1g090170	56.579	76	32	1	65	139	133	208	1.79e-20	87.4
MS.gene053501.t1	MTR_5g012910	49.367	79	39	1	78	155	23	101	2.13e-20	84.7
MS.gene053501.t1	MTR_2g090235	55.000	80	36	0	60	139	195	274	2.49e-20	88.2
MS.gene053501.t1	MTR_1g090170	56.579	76	32	1	65	139	220	295	2.72e-20	87.8
MS.gene053501.t1	MTR_4g119270	52.055	73	35	0	70	142	40	112	2.74e-20	87.4
MS.gene053501.t1	MTR_4g054860	65.152	66	20	2	84	146	132	197	5.86e-20	85.5
MS.gene053501.t1	MTR_8g006410	48.276	87	39	2	69	149	32	118	6.61e-20	84.0
MS.gene053501.t1	MTR_5g083330	55.714	70	31	0	74	143	26	95	9.73e-20	85.1
MS.gene053501.t1	MTR_8g069360	64.912	57	20	0	82	138	43	99	1.32e-19	86.3
MS.gene053501.t1	MTR_1g019110	54.167	72	30	1	83	154	44	112	1.39e-19	82.4
MS.gene053501.t1	MTR_3g106290	63.793	58	21	0	82	139	7	64	1.55e-19	82.4
MS.gene053501.t1	MTR_0939s0010	47.423	97	44	1	83	172	65	161	2.31e-19	82.4
MS.gene053501.t1	MTR_1g074250	68.333	60	17	1	82	139	18	77	2.93e-19	80.5
MS.gene053501.t1	MTR_5g016750	56.897	58	25	0	82	139	24	81	3.03e-19	81.6
MS.gene053501.t1	MTR_1g069960	74.576	59	14	1	82	139	26	84	3.70e-19	80.5
MS.gene053501.t1	MTR_7g085810	57.353	68	28	1	72	138	18	85	5.40e-19	82.8
MS.gene053501.t1	MTR_1g070015	59.155	71	26	2	79	146	80	150	6.48e-19	81.6
MS.gene053501.t1	MTR_1g014860	52.239	67	32	0	73	139	12	78	1.02e-18	81.3
MS.gene053501.t1	MTR_5g032820	66.667	57	19	0	82	138	45	101	1.45e-18	82.8
MS.gene053501.t1	MTR_1g070000	63.077	65	21	2	85	146	86	150	1.59e-18	80.9
MS.gene053501.t1	MTR_2g016730	52.857	70	33	0	71	140	11	80	1.60e-18	82.4
MS.gene053501.t1	MTR_7g084370	56.944	72	31	0	78	149	37	108	2.07e-18	81.3
MS.gene053501.t1	MTR_8g085960	54.930	71	31	1	69	138	10	80	2.10e-18	80.5
MS.gene053501.t1	MTR_7g096810	71.186	59	16	1	82	139	12	70	2.22e-18	77.8
MS.gene053501.t1	MTR_1g014780	52.239	67	32	0	73	139	28	94	2.82e-18	80.1
MS.gene053501.t1	MTR_1g014820	35.714	140	63	4	83	196	27	165	3.09e-18	80.9
MS.gene053501.t1	MTR_8g023680	68.750	48	15	0	82	129	115	162	3.35e-18	81.6
MS.gene053501.t1	MTR_1g070020	62.687	67	22	2	83	146	70	136	3.85e-18	79.3
MS.gene053501.t1	MTR_4g111915	58.065	62	26	0	82	143	52	113	3.89e-18	77.8
MS.gene053501.t1	MTR_1g043350	61.728	81	27	3	70	146	68	148	4.73e-18	79.3
MS.gene053501.t1	MTR_1g070035	58.571	70	26	2	83	151	77	144	4.94e-18	79.3
MS.gene053501.t1	MTR_7g117690	52.459	61	29	0	79	139	24	84	5.46e-18	78.2
MS.gene053501.t1	MTR_1g070045	62.687	67	22	2	83	146	66	132	6.01e-18	77.8
MS.gene053501.t1	MTR_4g082345	56.522	69	29	1	76	144	42	109	6.94e-18	80.5
MS.gene053501.t1	MTR_7g070220	60.317	63	18	1	83	138	78	140	9.36e-18	81.3
MS.gene053501.t1	MTR_8g032610	52.941	68	32	0	74	141	18	85	9.74e-18	80.1
MS.gene053501.t1	MTR_4g112490	53.731	67	31	0	77	143	47	113	9.89e-18	78.2
MS.gene053501.t1	MTR_6g033255	63.514	74	27	0	79	152	16	89	1.06e-17	78.2
MS.gene053501.t1	MTR_1g014800	56.140	57	25	0	83	139	31	87	1.48e-17	78.2
MS.gene053501.t1	MTR_6g012970	61.404	57	22	0	82	138	37	93	1.71e-17	80.1
MS.gene053501.t1	MTR_6g029180	50.667	75	34	1	64	138	17	88	2.36e-17	79.0
MS.gene053501.t1	MTR_4g035430	43.902	82	46	0	68	149	17	98	2.69e-17	77.4
MS.gene053501.t1	MTR_8g027465	46.753	77	39	1	79	155	35	109	2.78e-17	76.3
MS.gene053501.t1	MTR_7g011630	61.404	57	22	0	82	138	41	97	2.88e-17	79.7
MS.gene053501.t1	MTR_1g101600	53.731	67	31	0	72	138	30	96	5.13e-17	76.3
MS.gene053501.t1	MTR_1g105400	52.381	63	30	0	67	129	99	161	8.74e-17	77.8
MS.gene053501.t1	MTR_2g043050	49.275	69	35	0	71	139	7	75	8.80e-17	75.9
MS.gene053501.t1	MTR_1g006660	55.556	81	34	1	71	149	33	113	1.44e-16	75.9
MS.gene053501.t1	MTR_1g110970	52.381	63	30	0	68	130	82	144	1.45e-16	77.0
MS.gene053501.t1	MTR_1g069940	67.164	67	19	2	83	146	95	161	1.47e-16	75.9
MS.gene053501.t1	MTR_1g069945	68.657	67	18	2	83	146	101	167	2.09e-16	75.5
MS.gene053501.t1	MTR_1g040430	65.385	52	17	1	90	140	118	169	2.85e-16	74.3
MS.gene053501.t1	MTR_7g096830	62.162	74	25	2	76	146	91	164	3.05e-16	74.7
MS.gene053501.t1	MTR_2g043030	47.826	69	36	0	71	139	7	75	3.39e-16	73.9
MS.gene053501.t1	MTR_6g465530	52.239	67	32	0	72	138	22	88	6.24e-16	73.2
MS.gene053501.t1	MTR_6g088425	49.451	91	34	1	69	147	23	113	6.90e-16	73.9
MS.gene053501.t1	MTR_1g097190	46.429	84	40	2	65	143	3	86	7.03e-16	71.6
MS.gene053501.t1	MTR_3g112440	53.086	81	36	1	83	161	39	119	7.49e-16	73.6
MS.gene053501.t1	MTR_5g008540	47.761	67	35	0	85	151	26	92	7.61e-16	70.5
MS.gene053501.t1	MTR_3g017420	62.000	50	19	0	90	139	2	51	1.24e-15	69.3
MS.gene053501.t1	MTR_6g465510	50.746	67	33	0	72	138	22	88	1.46e-15	72.4
MS.gene053501.t1	MTR_5g008590	56.716	67	29	0	83	149	11	77	1.86e-15	71.6
MS.gene053501.t1	MTR_1g012470	66.667	60	20	0	81	140	5	64	2.30e-15	71.6
MS.gene053501.t1	MTR_6g465690	49.254	67	34	0	72	138	52	118	2.44e-15	72.8
MS.gene053501.t1	MTR_6g466130	49.254	67	34	0	72	138	55	121	2.60e-15	72.0
MS.gene053501.t1	MTR_8g023700	61.702	47	18	0	83	129	117	163	4.72e-15	72.8
MS.gene053501.t1	MTR_6g466000	49.254	67	34	0	72	138	46	112	5.98e-15	71.2
MS.gene053501.t1	MTR_1g074370	64.286	70	22	2	79	145	69	138	6.41e-15	70.9
MS.gene053501.t1	MTR_2g043040	49.206	63	32	0	77	139	13	75	7.21e-15	70.9
MS.gene053501.t1	MTR_3g105510	52.632	57	27	0	82	138	36	92	7.83e-15	71.2
MS.gene053501.t1	MTR_6g037610	82.000	50	9	0	90	139	187	236	1.24e-14	72.0
MS.gene053501.t1	MTR_6g465430	60.714	56	22	0	83	138	54	109	1.40e-14	70.5
MS.gene053501.t1	MTR_1g098460	82.000	50	9	0	90	139	146	195	1.57e-14	71.6
MS.gene053501.t1	MTR_2g043020	44.928	69	38	0	71	139	7	75	1.63e-14	69.3
MS.gene053501.t1	MTR_7g028925	49.254	67	31	1	73	139	19	82	1.86e-14	66.6
MS.gene053501.t1	MTR_7g096780	67.164	67	19	2	83	146	85	151	1.91e-14	69.7
MS.gene053501.t1	MTR_6g465450	50.794	63	31	0	76	138	47	109	2.03e-14	70.1
MS.gene053501.t1	MTR_6g465850	57.143	56	24	0	83	138	63	118	2.12e-14	70.5
MS.gene053501.t1	MTR_6g465460	58.929	56	23	0	83	138	54	109	2.18e-14	70.1
MS.gene053501.t1	MTR_1g023170	48.864	88	28	1	69	139	9	96	2.58e-14	70.1
MS.gene053501.t1	MTR_4g102670	52.459	61	28	1	79	139	11	70	2.91e-14	68.2
MS.gene053501.t1	MTR_5g085125	46.835	79	42	0	72	150	5	83	3.06e-14	68.2
MS.gene053501.t1	MTR_6g466020	53.571	56	26	0	83	138	43	98	4.89e-14	67.8
MS.gene053501.t1	MTR_3g107380	65.000	60	21	0	82	141	7	66	1.79e-13	66.6
MS.gene053501.t1	MTR_5g008790	51.613	62	28	1	80	139	15	76	1.79e-13	65.9
MS.gene053501.t1	MTR_6g465420	57.143	56	24	0	83	138	54	109	2.04e-13	67.4
MS.gene053501.t1	MTR_5g008470	44.706	85	36	2	82	161	69	147	9.40e-13	64.3
MS.gene053501.t1	MTR_5g057810	59.184	49	20	0	82	130	87	135	1.30e-12	65.5
MS.gene053501.t1	MTR_5g057647	59.184	49	20	0	82	130	87	135	1.30e-12	65.5
MS.gene053501.t1	MTR_3g105480	51.852	54	26	0	85	138	33	86	1.34e-12	64.7
MS.gene053501.t1	MTR_5g053920	49.275	69	32	2	76	143	59	125	2.31e-12	65.1
MS.gene053501.t1	MTR_5g009410	60.294	68	27	0	79	146	113	180	6.12e-12	63.9
MS.gene053501.t1	MTR_3g062440	45.652	92	41	3	72	155	97	187	9.00e-12	62.8
MS.gene053501.t1	MTR_1g093600	50.000	62	29	1	76	137	57	116	1.55e-11	62.8
MS.gene053501.t1	MTR_5g010940	44.872	78	33	2	71	138	38	115	3.01e-11	60.8
MS.gene053501.t1	MTR_5g058470	55.556	63	27	1	79	140	92	154	3.76e-11	61.2
MS.gene053501.t1	MTR_5g010910	44.872	78	33	2	71	138	33	110	3.91e-11	60.5
MS.gene053501.t1	MTR_5g010930	40.625	96	45	3	71	156	33	126	5.34e-11	60.1
MS.gene053501.t1	MTR_5g015070	39.216	102	56	4	83	180	355	454	5.70e-11	61.6
MS.gene053501.t1	MTR_3g072610	52.308	65	29	1	82	144	24	88	5.96e-11	60.1
MS.gene053501.t1	MTR_1g101550	58.621	58	23	1	82	139	56	112	6.35e-11	60.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene053501.t1	AT4G34410	47.674	172	51	3	10	142	24	195	4.95e-38	132
MS.gene053501.t1	AT5G67000	44.366	142	71	2	6	147	48	181	1.21e-30	111
MS.gene053501.t1	AT2G47520	75.000	64	16	0	76	139	43	106	3.82e-30	109
MS.gene053501.t1	AT5G61890	44.444	135	65	2	5	139	22	146	7.60e-30	111
MS.gene053501.t1	AT2G33710	73.134	67	18	0	73	139	60	126	8.94e-30	110
MS.gene053501.t1	AT2G33710	73.134	67	18	0	73	139	60	126	1.10e-29	110
MS.gene053501.t1	AT3G16770	73.846	65	17	0	75	139	71	135	3.22e-29	109
MS.gene053501.t1	AT5G13330	46.281	121	39	2	19	139	1	95	4.45e-29	108
MS.gene053501.t1	AT4G11140	82.759	58	10	0	82	139	86	143	1.08e-28	108
MS.gene053501.t1	AT3G15210	61.538	78	30	0	62	139	4	81	5.00e-27	103
MS.gene053501.t1	AT5G44210	71.212	66	19	0	79	144	29	94	2.18e-26	100
MS.gene053501.t1	AT1G03800	66.154	65	22	0	77	141	47	111	4.32e-26	101
MS.gene053501.t1	AT1G72360	65.625	64	22	0	76	139	18	81	4.92e-26	100
MS.gene053501.t1	AT4G27950	53.763	93	41	1	82	172	117	209	7.95e-26	102
MS.gene053501.t1	AT1G72360	65.625	64	22	0	76	139	69	132	1.06e-25	100
MS.gene053501.t1	AT1G72360	65.625	64	22	0	76	139	67	130	1.10e-25	100
MS.gene053501.t1	AT1G28370	74.138	58	15	0	82	139	57	114	4.11e-25	97.8
MS.gene053501.t1	AT4G23750	75.439	57	14	0	82	138	121	177	4.44e-25	100
MS.gene053501.t1	AT4G23750	75.439	57	14	0	82	138	121	177	4.44e-25	100
MS.gene053501.t1	AT1G28370	74.138	58	15	0	82	139	19	76	7.55e-25	95.9
MS.gene053501.t1	AT5G50080	75.342	73	13	1	67	139	75	142	2.10e-24	96.3
MS.gene053501.t1	AT5G50080	75.342	73	13	1	67	139	66	133	2.79e-24	95.9
MS.gene053501.t1	AT3G61630	70.492	61	18	0	78	138	100	160	4.93e-24	97.1
MS.gene053501.t1	AT5G51190	72.881	59	15	1	83	140	72	130	5.16e-24	95.1
MS.gene053501.t1	AT5G53290	72.881	59	16	0	82	140	124	182	5.45e-24	97.8
MS.gene053501.t1	AT4G17500	71.875	64	17	1	78	140	143	206	7.63e-24	95.9
MS.gene053501.t1	AT5G43410	71.429	63	17	1	78	139	10	72	1.17e-23	91.7
MS.gene053501.t1	AT5G47230	53.000	100	45	2	42	140	116	214	1.20e-23	95.9
MS.gene053501.t1	AT3G20310	48.454	97	45	2	79	175	23	114	1.64e-23	94.4
MS.gene053501.t1	AT5G47220	45.926	135	53	5	13	140	54	175	1.92e-23	94.4
MS.gene053501.t1	AT1G43160	49.242	132	41	3	19	139	1	117	1.97e-23	92.8
MS.gene053501.t1	AT1G50640	67.742	62	20	0	79	140	24	85	2.28e-23	93.6
MS.gene053501.t1	AT5G07310	46.667	135	56	3	5	139	30	148	4.25e-23	93.6
MS.gene053501.t1	AT2G44840	61.972	71	26	1	77	146	86	156	4.72e-23	92.8
MS.gene053501.t1	AT2G22200	57.317	82	28	2	65	145	59	134	7.43e-23	93.2
MS.gene053501.t1	AT4G32800	53.846	78	36	0	72	149	8	85	1.35e-22	91.3
MS.gene053501.t1	AT5G05410	54.545	88	33	1	83	163	79	166	2.21e-22	92.4
MS.gene053501.t1	AT5G11590	54.878	82	35	1	70	149	36	117	2.26e-22	91.3
MS.gene053501.t1	AT5G05410	54.545	88	33	1	83	163	79	166	2.94e-22	92.8
MS.gene053501.t1	AT3G23230	69.355	62	18	1	79	139	16	77	3.07e-22	88.2
MS.gene053501.t1	AT4G17490	74.576	59	14	1	83	140	137	195	4.35e-22	91.3
MS.gene053501.t1	AT4G13620	59.211	76	31	0	71	146	220	295	5.92e-22	92.4
MS.gene053501.t1	AT1G22190	69.841	63	18	1	78	139	77	139	6.16e-22	90.5
MS.gene053501.t1	AT1G22985	64.384	73	21	2	78	145	70	142	7.42e-22	87.8
MS.gene053501.t1	AT1G75490	57.143	70	30	0	83	152	42	111	8.29e-22	89.0
MS.gene053501.t1	AT5G61600	67.797	59	18	1	83	140	88	146	9.40e-22	89.7
MS.gene053501.t1	AT1G36060	69.492	59	18	0	83	141	143	201	1.00e-21	90.9
MS.gene053501.t1	AT1G28360	66.129	62	21	0	78	139	7	68	1.17e-21	88.2
MS.gene053501.t1	AT1G15360	64.516	62	22	0	79	140	3	64	1.18e-21	88.6
MS.gene053501.t1	AT1G15360	64.516	62	22	0	79	140	3	64	1.18e-21	88.6
MS.gene053501.t1	AT1G71450	47.126	87	46	0	70	156	11	97	1.25e-21	87.8
MS.gene053501.t1	AT2G20350	45.113	133	66	3	2	134	13	138	1.30e-21	87.4
MS.gene053501.t1	AT3G23240	49.123	114	51	4	72	178	71	184	1.84e-21	88.6
MS.gene053501.t1	AT1G78080	71.930	57	16	0	83	139	152	208	2.07e-21	90.5
MS.gene053501.t1	AT4G39780	70.175	57	17	0	83	139	93	149	3.01e-21	89.0
MS.gene053501.t1	AT2G31230	66.176	68	20	2	83	147	86	153	3.34e-21	88.2
MS.gene053501.t1	AT5G25810	51.899	79	38	0	69	147	22	100	3.35e-21	87.8
MS.gene053501.t1	AT4G36900	55.556	63	28	0	77	139	24	86	3.39e-21	87.0
MS.gene053501.t1	AT2G35700	49.367	79	39	1	78	155	40	118	4.22e-21	87.0
MS.gene053501.t1	AT2G46310	70.175	57	17	0	82	138	98	154	4.79e-21	89.0
MS.gene053501.t1	AT4G28140	70.175	57	17	0	83	139	143	199	5.49e-21	88.6
MS.gene053501.t1	AT2G25820	58.209	67	28	0	83	149	26	92	5.85e-21	87.4
MS.gene053501.t1	AT5G64750	78.000	50	11	0	90	139	192	241	6.60e-21	89.7
MS.gene053501.t1	AT2G44940	56.338	71	31	0	79	149	96	166	6.96e-21	88.6
MS.gene053501.t1	AT5G65130	68.421	57	18	0	83	139	111	167	7.59e-21	87.8
MS.gene053501.t1	AT5G65130	68.421	57	18	0	83	139	113	169	7.82e-21	87.8
MS.gene053501.t1	AT2G20880	70.175	57	17	0	83	139	187	243	9.63e-21	88.6
MS.gene053501.t1	AT5G25390	56.522	69	30	0	82	150	6	74	1.07e-20	85.5
MS.gene053501.t1	AT4G16750	46.512	86	45	1	71	155	28	113	1.12e-20	85.5
MS.gene053501.t1	AT1G71130	64.706	68	19	1	81	143	77	144	1.33e-20	84.7
MS.gene053501.t1	AT5G67190	55.556	63	28	0	77	139	15	77	1.72e-20	85.1
MS.gene053501.t1	AT4G06746	57.627	59	25	0	81	139	34	92	1.72e-20	84.0
MS.gene053501.t1	AT5G25190	63.793	58	21	0	82	139	7	64	2.05e-20	84.7
MS.gene053501.t1	AT4G18450	68.750	64	18	2	79	140	106	169	2.23e-20	87.0
MS.gene053501.t1	AT5G07580	66.102	59	19	1	83	140	110	168	2.30e-20	85.1
MS.gene053501.t1	AT3G60490	47.778	90	42	2	71	155	55	144	2.33e-20	86.3
MS.gene053501.t1	AT5G13910	56.164	73	32	0	70	142	7	79	2.89e-20	85.1
MS.gene053501.t1	AT3G57600	54.412	68	31	0	82	149	27	94	3.02e-20	86.3
MS.gene053501.t1	AT5G19790	53.521	71	33	0	68	138	7	77	3.19e-20	85.9
MS.gene053501.t1	AT5G18560	41.000	100	59	0	69	168	41	140	4.94e-20	86.7
MS.gene053501.t1	AT3G16280	63.158	57	21	0	83	139	61	117	5.56e-20	84.7
MS.gene053501.t1	AT2G23340	59.649	57	23	0	83	139	28	84	5.78e-20	83.6
MS.gene053501.t1	AT3G16280	63.158	57	21	0	83	139	79	135	6.10e-20	85.1
MS.gene053501.t1	AT1G46768	58.065	62	26	0	78	139	26	87	6.50e-20	82.4
MS.gene053501.t1	AT1G46768	58.065	62	26	0	78	139	26	87	6.70e-20	82.8
MS.gene053501.t1	AT1G46768	58.065	62	26	0	78	139	26	87	6.70e-20	82.8
MS.gene053501.t1	AT1G21910	45.679	81	36	1	83	163	50	122	1.11e-19	84.0
MS.gene053501.t1	AT1G12980	66.667	57	19	0	82	138	56	112	2.59e-19	84.7
MS.gene053501.t1	AT3G50260	57.895	57	24	0	83	139	21	77	2.77e-19	80.9
MS.gene053501.t1	AT3G11020	64.912	57	20	0	83	139	78	134	3.05e-19	84.3
MS.gene053501.t1	AT1G24590	51.190	84	37	1	82	161	57	140	4.30e-19	83.6
MS.gene053501.t1	AT5G25390	55.072	69	28	1	82	150	6	71	4.50e-19	81.3
MS.gene053501.t1	AT3G14230	40.132	152	66	3	69	206	109	249	6.08e-19	84.0
MS.gene053501.t1	AT3G14230	40.132	152	66	3	69	206	110	250	6.25e-19	84.0
MS.gene053501.t1	AT3G14230	40.132	152	66	3	69	206	114	254	6.42e-19	84.0
MS.gene053501.t1	AT1G01250	38.835	103	53	1	45	147	17	109	1.15e-18	80.5
MS.gene053501.t1	AT5G67010	40.541	111	54	4	10	116	21	123	1.65e-18	79.3
MS.gene053501.t1	AT1G53910	64.935	77	24	1	77	150	119	195	1.97e-18	82.4
MS.gene053501.t1	AT1G53910	64.935	77	24	1	77	150	119	195	1.97e-18	82.4
MS.gene053501.t1	AT1G53910	64.935	77	24	1	77	150	117	193	2.06e-18	82.4
MS.gene053501.t1	AT4G25470	56.716	67	29	0	72	138	40	106	2.43e-18	80.1
MS.gene053501.t1	AT5G18450	64.286	56	20	0	83	138	34	89	2.51e-18	81.6
MS.gene053501.t1	AT1G74930	49.296	71	36	0	69	139	7	77	4.10e-18	79.0
MS.gene053501.t1	AT4G25490	55.224	67	30	0	72	138	37	103	4.20e-18	79.3
MS.gene053501.t1	AT2G40340	59.322	59	24	0	83	141	14	72	4.52e-18	80.5
MS.gene053501.t1	AT2G40340	59.322	59	24	0	83	141	14	72	4.52e-18	80.5
MS.gene053501.t1	AT2G40340	59.322	59	24	0	83	141	14	72	4.52e-18	80.5
MS.gene053501.t1	AT1G12890	54.412	68	31	0	71	138	9	76	5.59e-18	79.3
MS.gene053501.t1	AT2G40350	57.627	59	25	0	83	141	74	132	5.98e-18	77.8
MS.gene053501.t1	AT2G40350	57.627	59	25	0	83	141	67	125	6.78e-18	77.4
MS.gene053501.t1	AT1G28160	62.295	61	23	0	82	142	38	98	1.32e-17	78.6
MS.gene053501.t1	AT5G21960	60.345	58	23	0	82	139	6	63	1.42e-17	78.2
MS.gene053501.t1	AT2G40340	59.322	59	24	0	83	141	79	137	1.58e-17	79.7
MS.gene053501.t1	AT2G40340	59.322	59	24	0	83	141	72	130	1.66e-17	79.7
MS.gene053501.t1	AT2G40340	59.322	59	24	0	83	141	72	130	1.82e-17	79.0
MS.gene053501.t1	AT4G25480	53.731	67	31	0	72	138	40	106	2.13e-17	77.4
MS.gene053501.t1	AT2G36450	50.704	71	34	1	70	139	2	72	6.65e-17	75.5
MS.gene053501.t1	AT3G23220	68.182	66	20	1	82	146	13	78	8.59e-17	73.9
MS.gene053501.t1	AT1G19210	55.932	59	26	0	81	139	10	68	1.07e-16	75.1
MS.gene053501.t1	AT5G51990	53.731	67	31	0	72	138	43	109	1.24e-16	75.9
MS.gene053501.t1	AT1G06160	64.706	68	21	2	83	147	82	149	1.74e-16	75.5
MS.gene053501.t1	AT4G31060	54.386	57	26	0	83	139	27	83	3.58e-16	73.6
MS.gene053501.t1	AT1G04370	69.841	63	18	1	78	139	15	77	4.32e-16	72.0
MS.gene053501.t1	AT1G53170	65.625	64	22	0	78	141	26	89	5.73e-16	73.2
MS.gene053501.t1	AT1G68550	68.750	48	15	0	82	129	112	159	7.26e-16	75.1
MS.gene053501.t1	AT1G68550	68.750	48	15	0	82	129	112	159	7.26e-16	75.1
MS.gene053501.t1	AT1G77200	54.054	74	34	0	74	147	34	107	1.43e-15	73.2
MS.gene053501.t1	AT2G40220	58.333	72	27	1	70	138	39	110	2.55e-15	73.6
MS.gene053501.t1	AT5G11190	56.098	82	27	1	82	163	6	78	2.81e-15	71.2
MS.gene053501.t1	AT5G61590	57.746	71	29	1	71	140	95	165	1.18e-14	70.1
MS.gene053501.t1	AT1G22810	50.000	68	31	2	81	145	12	79	6.93e-14	66.6
MS.gene053501.t1	AT2G38340	59.091	66	19	1	82	139	69	134	9.66e-14	68.2
MS.gene053501.t1	AT1G49120	48.750	80	39	1	77	154	81	160	1.59e-13	68.6
MS.gene053501.t1	AT1G63030	48.611	72	33	1	71	138	14	85	2.12e-13	66.2
MS.gene053501.t1	AT1G63030	48.611	72	33	1	71	138	14	85	2.12e-13	66.2
MS.gene053501.t1	AT1G71520	40.449	89	47	3	81	164	12	99	2.22e-13	65.1
MS.gene053501.t1	AT1G77640	55.556	63	28	0	77	139	37	99	2.46e-13	67.0
MS.gene053501.t1	AT1G12610	45.833	72	35	1	71	138	14	85	5.25e-13	65.5
MS.gene053501.t1	AT3G25890	61.224	49	19	0	81	129	129	177	7.03e-13	66.6
MS.gene053501.t1	AT3G25890	61.224	49	19	0	81	129	129	177	7.03e-13	66.6
MS.gene053501.t1	AT1G64380	65.574	61	21	0	79	139	132	192	1.56e-12	65.5
MS.gene053501.t1	AT1G33760	53.846	65	30	0	83	147	20	84	1.61e-12	63.9
MS.gene053501.t1	AT1G68840	50.000	68	32	1	76	143	58	123	6.65e-12	63.9
MS.gene053501.t1	AT1G68840	50.000	68	32	1	76	143	58	123	6.65e-12	63.9
MS.gene053501.t1	AT1G13260	38.776	98	54	2	76	169	55	150	3.64e-11	61.6
MS.gene053501.t1	AT3G25730	36.538	104	57	3	70	168	49	148	3.65e-11	61.6
MS.gene053501.t1	AT1G44830	53.846	65	29	1	82	145	34	98	5.94e-11	60.1
MS.gene053501.t1	AT5G52020	53.226	62	28	1	78	139	60	120	6.46e-11	60.1

Find 62 sgRNAs with CRISPR-Local

Find 71 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAATGCAAATTGGGAATAAT+TGG	0.136398	4.3:-26713979	MS.gene053501:CDS
TCAACAACTTATGAGGTTTA+TGG	0.166648	4.3:-26713915	MS.gene053501:CDS
ATGAATGAAGAAATGCAAAT+TGG	0.238856	4.3:-26713989	MS.gene053501:CDS
GGCAGAGACCATGGGGAAAA+TGG	0.280709	4.3:-26714219	MS.gene053501:CDS
ACATGAACAACCACTTCTTC+TGG	0.357166	4.3:+26714025	None:intergenic
GTTCCTCAACAGTACGCTTA+AGG	0.360964	4.3:+26714047	None:intergenic
TGGAAAATTAAGCTTGGCTC+TGG	0.374164	4.3:+26714084	None:intergenic
GCTGCTTCCCACGGTGGAGG+TGG	0.374871	4.3:+26714390	None:intergenic
TGCAACATAGCAGGATGTTT+AGG	0.384768	4.3:-26714313	MS.gene053501:CDS
TTCCTCAACAGTACGCTTAA+GGG	0.385516	4.3:+26714048	None:intergenic
GGTGAGGGTGGTGGTGGAGA+AGG	0.390920	4.3:+26714468	None:intergenic
GATTCTTCTGATTCTAGAAC+AGG	0.395276	4.3:-26713893	MS.gene053501:CDS
CGAGACGTGCAGTCCGTGTT+TGG	0.399997	4.3:-26714177	MS.gene053501:CDS
TGAATGAAGAAATGCAAATT+GGG	0.418905	4.3:-26713988	MS.gene053501:CDS
AATGCAAATTGGGAATAATT+GGG	0.426474	4.3:-26713978	MS.gene053501:CDS
CGTGCAGTCCGTGTTTGGCT+TGG	0.454972	4.3:-26714172	MS.gene053501:CDS
TGCTATGTTGCATTCACGAC+AGG	0.455760	4.3:+26714324	None:intergenic
ATCGGAGGTGAGGGTGGTGG+TGG	0.456825	4.3:+26714462	None:intergenic
AGCCTCCTCCGCCGTGGTAA+AGG	0.456876	4.3:+26714147	None:intergenic
ACCGGAGACTACGTTGGTTA+AGG	0.457963	4.3:+26714414	None:intergenic
GCAGAGACCATGGGGAAAAT+GGG	0.459400	4.3:-26714218	MS.gene053501:CDS
CTTAGAGCAAATAGTTCAAC+CGG	0.463148	4.3:-26714362	MS.gene053501:CDS
GCTGCTGCTTCCCACGGTGG+AGG	0.482767	4.3:+26714387	None:intergenic
CTGCTTCCCACGGTGGAGGT+GGG	0.484331	4.3:+26714391	None:intergenic
TCCCACGGTGGAGGTGGGAC+CGG	0.487439	4.3:+26714396	None:intergenic
GAGGAGTGAGGCAGAGACCA+TGG	0.501014	4.3:-26714228	MS.gene053501:CDS
AGGAGTGAGGCAGAGACCAT+GGG	0.502190	4.3:-26714227	MS.gene053501:CDS
TAAGCAGCTGCTGCTTCCCA+CGG	0.502795	4.3:+26714381	None:intergenic
TTGATCGGAGGTGAGGGTGG+TGG	0.503551	4.3:+26714459	None:intergenic
AACCTTTACCACGGCGGAGG+AGG	0.521446	4.3:-26714149	MS.gene053501:CDS
GCCTTAACCAACGTAGTCTC+CGG	0.524588	4.3:-26714415	MS.gene053501:CDS
AGAAGTGGTTGTTCATGTAA+AGG	0.530475	4.3:-26714020	MS.gene053501:CDS
TGGAACCTTTACCACGGCGG+AGG	0.533157	4.3:-26714152	MS.gene053501:CDS
TGTCGTGAATGCAACATAGC+AGG	0.533664	4.3:-26714322	MS.gene053501:CDS
AGTTCAACCGGCAGTGAACA+TGG	0.535559	4.3:-26714350	MS.gene053501:CDS
CAGGTTTCCATGTTCACTGC+CGG	0.538746	4.3:+26714343	None:intergenic
GACAAGTGGAAAATTAAGCT+TGG	0.549098	4.3:+26714078	None:intergenic
TCCGGTCCCACCTCCACCGT+GGG	0.558111	4.3:-26714397	MS.gene053501:CDS
GAGTTCTTGATCGGAGGTGA+GGG	0.565113	4.3:+26714453	None:intergenic
TTCTTGATCGGAGGTGAGGG+TGG	0.566361	4.3:+26714456	None:intergenic
AGAGTTCTTGATCGGAGGTG+AGG	0.568888	4.3:+26714452	None:intergenic
ATCCCTTAAGCGTACTGTTG+AGG	0.586589	4.3:-26714050	MS.gene053501:CDS
TAAGCTTGGCTCTGGGCCCG+CGG	0.588130	4.3:+26714092	None:intergenic
ATGCCGCTATCGAGTTCCGC+GGG	0.598159	4.3:-26714108	MS.gene053501:CDS
GGAAAATTAAGCTTGGCTCT+GGG	0.598454	4.3:+26714085	None:intergenic
CTCCGGTCCCACCTCCACCG+TGG	0.602815	4.3:-26714398	MS.gene053501:CDS
GACTGAGAGTTCTTGATCGG+AGG	0.604051	4.3:+26714447	None:intergenic
TGTTGAGGAACCAGAAGAAG+TGG	0.608852	4.3:-26714035	MS.gene053501:CDS
AATGCCGCTATCGAGTTCCG+CGG	0.614162	4.3:-26714109	MS.gene053501:CDS
CAAACACGGACTGCACGTCT+CGG	0.616293	4.3:+26714178	None:intergenic
GCTAAGAATAATAAGTACAG+AGG	0.620927	4.3:-26714247	MS.gene053501:CDS
GATGACTGAGAGTTCTTGAT+CGG	0.621381	4.3:+26714444	None:intergenic
GCAGCTGCTGCTTCCCACGG+TGG	0.626642	4.3:+26714384	None:intergenic
TAAAGGTTCCAAGCCAAACA+CGG	0.647658	4.3:+26714164	None:intergenic
GGGCCCGCGGAACTCGATAG+CGG	0.656229	4.3:+26714105	None:intergenic
TTGGCTTGGAACCTTTACCA+CGG	0.660397	4.3:-26714158	MS.gene053501:CDS
GGAGTGAGGCAGAGACCATG+GGG	0.661786	4.3:-26714226	MS.gene053501:CDS
TCTAGCAGCCTCCTCCGCCG+TGG	0.668041	4.3:+26714141	None:intergenic
ATAATAAGTACAGAGGAGTG+AGG	0.674805	4.3:-26714240	MS.gene053501:CDS
TTAAGGGATTCATCGACAAG+TGG	0.701306	4.3:+26714064	None:intergenic
GGTGGGACCGGAGACTACGT+TGG	0.728117	4.3:+26714408	None:intergenic
GCTTGGAACCTTTACCACGG+CGG	0.735195	4.3:-26714155	MS.gene053501:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AAATGCAAATTGGGAATAAT+TGG	-	chr4.3:26714376-26714395	MS.gene053501:CDS	25.0%
!	AATGCAAATTGGGAATAATT+GGG	-	chr4.3:26714377-26714396	MS.gene053501:CDS	25.0%
!	ATGAATGAAGAAATGCAAAT+TGG	-	chr4.3:26714366-26714385	MS.gene053501:CDS	25.0%
!	TGAATGAAGAAATGCAAATT+GGG	-	chr4.3:26714367-26714386	MS.gene053501:CDS	25.0%
!!	ATAATTGGGAATGTGATTTT+TGG	-	chr4.3:26714391-26714410	MS.gene053501:CDS	25.0%
!!	TAATTGGGAATGTGATTTTT+GGG	-	chr4.3:26714392-26714411	MS.gene053501:CDS	25.0%
!!!	GTTTTTGTTTTTTCTCTTCA+GGG	+	chr4.3:26714080-26714099	None:intergenic	25.0%
!!!	TGTTTTTGTTTTTTCTCTTC+AGG	+	chr4.3:26714081-26714100	None:intergenic	25.0%
	GCTAAGAATAATAAGTACAG+AGG	-	chr4.3:26714108-26714127	MS.gene053501:CDS	30.0%
	TCAACAACTTATGAGGTTTA+TGG	-	chr4.3:26714440-26714459	MS.gene053501:CDS	30.0%
!	CTGATTTTCAACAACTTATG+AGG	-	chr4.3:26714433-26714452	MS.gene053501:CDS	30.0%
!!!	GTGATTTTTGGGATAGTATT+GGG	-	chr4.3:26714403-26714422	MS.gene053501:CDS	30.0%
!!!	TGATTTTTGGGATAGTATTG+GGG	-	chr4.3:26714404-26714423	MS.gene053501:CDS	30.0%
!!!	TGTGATTTTTGGGATAGTAT+TGG	-	chr4.3:26714402-26714421	MS.gene053501:CDS	30.0%
	AGAAGTGGTTGTTCATGTAA+AGG	-	chr4.3:26714335-26714354	MS.gene053501:CDS	35.0%
	ATAATAAGTACAGAGGAGTG+AGG	-	chr4.3:26714115-26714134	MS.gene053501:CDS	35.0%
	CTTAGAGCAAATAGTTCAAC+CGG	-	chr4.3:26713993-26714012	MS.gene053501:CDS	35.0%
	GACAAGTGGAAAATTAAGCT+TGG	+	chr4.3:26714280-26714299	None:intergenic	35.0%
!!	GATTCTTCTGATTCTAGAAC+AGG	-	chr4.3:26714462-26714481	MS.gene053501:CDS	35.0%
	ACATGAACAACCACTTCTTC+TGG	+	chr4.3:26714333-26714352	None:intergenic	40.0%
	GATGACTGAGAGTTCTTGAT+CGG	+	chr4.3:26713914-26713933	None:intergenic	40.0%
	TAAAGGTTCCAAGCCAAACA+CGG	+	chr4.3:26714194-26714213	None:intergenic	40.0%
	TGCAACATAGCAGGATGTTT+AGG	-	chr4.3:26714042-26714061	MS.gene053501:CDS	40.0%
	TGGAAAATTAAGCTTGGCTC+TGG	+	chr4.3:26714274-26714293	None:intergenic	40.0%
	TTAAGGGATTCATCGACAAG+TGG	+	chr4.3:26714294-26714313	None:intergenic	40.0%
	TTCCTCAACAGTACGCTTAA+GGG	+	chr4.3:26714310-26714329	None:intergenic	40.0%
!	GGAAAATTAAGCTTGGCTCT+GGG	+	chr4.3:26714273-26714292	None:intergenic	40.0%
	ATCCCTTAAGCGTACTGTTG+AGG	-	chr4.3:26714305-26714324	MS.gene053501:CDS	45.0%
	GTTCCTCAACAGTACGCTTA+AGG	+	chr4.3:26714311-26714330	None:intergenic	45.0%
	TGCTATGTTGCATTCACGAC+AGG	+	chr4.3:26714034-26714053	None:intergenic	45.0%
	TGTCGTGAATGCAACATAGC+AGG	-	chr4.3:26714033-26714052	MS.gene053501:CDS	45.0%
	TGTTGAGGAACCAGAAGAAG+TGG	-	chr4.3:26714320-26714339	MS.gene053501:CDS	45.0%
!!	TTGGCTTGGAACCTTTACCA+CGG	-	chr4.3:26714197-26714216	MS.gene053501:CDS	45.0%
	AGAGTTCTTGATCGGAGGTG+AGG	+	chr4.3:26713906-26713925	None:intergenic	50.0%
	AGTTCAACCGGCAGTGAACA+TGG	-	chr4.3:26714005-26714024	MS.gene053501:CDS	50.0%
	CAGGTTTCCATGTTCACTGC+CGG	+	chr4.3:26714015-26714034	None:intergenic	50.0%
	GACTGAGAGTTCTTGATCGG+AGG	+	chr4.3:26713911-26713930	None:intergenic	50.0%
	GAGTTCTTGATCGGAGGTGA+GGG	+	chr4.3:26713905-26713924	None:intergenic	50.0%
	GCAGAGACCATGGGGAAAAT+GGG	-	chr4.3:26714137-26714156	MS.gene053501:CDS	50.0%
	GCCTTAACCAACGTAGTCTC+CGG	-	chr4.3:26713940-26713959	MS.gene053501:CDS	50.0%
!	ACCGGAGACTACGTTGGTTA+AGG	+	chr4.3:26713944-26713963	None:intergenic	50.0%
	AATGCCGCTATCGAGTTCCG+CGG	-	chr4.3:26714246-26714265	MS.gene053501:CDS	55.0%
	AGGAGTGAGGCAGAGACCAT+GGG	-	chr4.3:26714128-26714147	MS.gene053501:CDS	55.0%
	GCTTGGAACCTTTACCACGG+CGG	-	chr4.3:26714200-26714219	MS.gene053501:CDS	55.0%
	GGCAGAGACCATGGGGAAAA+TGG	-	chr4.3:26714136-26714155	MS.gene053501:CDS	55.0%
	TTCTTGATCGGAGGTGAGGG+TGG	+	chr4.3:26713902-26713921	None:intergenic	55.0%
!	CAAACACGGACTGCACGTCT+CGG	+	chr4.3:26714180-26714199	None:intergenic	55.0%
!	TAAGCAGCTGCTGCTTCCCA+CGG	+	chr4.3:26713977-26713996	None:intergenic	55.0%
!	TCAGCAGCCCATTTTCCCCA+TGG	+	chr4.3:26714147-26714166	None:intergenic	55.0%
	AACCTTTACCACGGCGGAGG+AGG	-	chr4.3:26714206-26714225	MS.gene053501:CDS	60.0%
	ATGCCGCTATCGAGTTCCGC+GGG	-	chr4.3:26714247-26714266	MS.gene053501:CDS	60.0%
	CGAGACGTGCAGTCCGTGTT+TGG	-	chr4.3:26714178-26714197	MS.gene053501:CDS	60.0%
	CGTGCAGTCCGTGTTTGGCT+TGG	-	chr4.3:26714183-26714202	MS.gene053501:CDS	60.0%
	GAGGAGTGAGGCAGAGACCA+TGG	-	chr4.3:26714127-26714146	MS.gene053501:CDS	60.0%
	GGAGTGAGGCAGAGACCATG+GGG	-	chr4.3:26714129-26714148	MS.gene053501:CDS	60.0%
	TGGAACCTTTACCACGGCGG+AGG	-	chr4.3:26714203-26714222	MS.gene053501:CDS	60.0%
	TTGATCGGAGGTGAGGGTGG+TGG	+	chr4.3:26713899-26713918	None:intergenic	60.0%
	AGCCTCCTCCGCCGTGGTAA+AGG	+	chr4.3:26714211-26714230	None:intergenic	65.0%
	CTGCTTCCCACGGTGGAGGT+GGG	+	chr4.3:26713967-26713986	None:intergenic	65.0%
	GGTGGGACCGGAGACTACGT+TGG	+	chr4.3:26713950-26713969	None:intergenic	65.0%
!	ATCGGAGGTGAGGGTGGTGG+TGG	+	chr4.3:26713896-26713915	None:intergenic	65.0%
!!	GGTGAGGGTGGTGGTGGAGA+AGG	+	chr4.3:26713890-26713909	None:intergenic	65.0%
!!	TAAGCTTGGCTCTGGGCCCG+CGG	+	chr4.3:26714266-26714285	None:intergenic	65.0%
	GCTGCTTCCCACGGTGGAGG+TGG	+	chr4.3:26713968-26713987	None:intergenic	70.0%
	GGGCCCGCGGAACTCGATAG+CGG	+	chr4.3:26714253-26714272	None:intergenic	70.0%
	TCCCACGGTGGAGGTGGGAC+CGG	+	chr4.3:26713962-26713981	None:intergenic	70.0%
	TCCGGTCCCACCTCCACCGT+GGG	-	chr4.3:26713958-26713977	MS.gene053501:CDS	70.0%
	TCTAGCAGCCTCCTCCGCCG+TGG	+	chr4.3:26714217-26714236	None:intergenic	70.0%
!	GCAGCTGCTGCTTCCCACGG+TGG	+	chr4.3:26713974-26713993	None:intergenic	70.0%
!	GCTGCTGCTTCCCACGGTGG+AGG	+	chr4.3:26713971-26713990	None:intergenic	70.0%
	CTCCGGTCCCACCTCCACCG+TGG	-	chr4.3:26713957-26713976	MS.gene053501:CDS	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.3	gene	26713877	26714500	26713877	ID=MS.gene053501
chr4.3	mRNA	26713877	26714500	26713877	ID=MS.gene053501.t1;Parent=MS.gene053501
chr4.3	exon	26713877	26714500	26713877	ID=MS.gene053501.t1.exon1;Parent=MS.gene053501.t1
chr4.3	CDS	26713877	26714500	26713877	ID=cds.MS.gene053501.t1;Parent=MS.gene053501.t1

Gene Sequence

>MS.gene053501

ATGAATTACTCCTTCTCCACCACCACCCTCACCTCCGATCAAGAACTCTCAGTCATCGTCGCTGCCTTAACCAACGTAGTCTCCGGTCCCACCTCCACCGTGGGAAGCAGCAGCTGCTTAGAGCAAATAGTTCAACCGGCAGTGAACATGGAAACCTGTCGTGAATGCAACATAGCAGGATGTTTAGGATGCAATTTCTTCCCTGAAGAGAAAAAACAAAAACAAAGAAGAGCTAAGAATAATAAGTACAGAGGAGTGAGGCAGAGACCATGGGGAAAATGGGCTGCTGAGATTCGTGATCCGAGACGTGCAGTCCGTGTTTGGCTTGGAACCTTTACCACGGCGGAGGAGGCTGCTAGAGCTTACGACAATGCCGCTATCGAGTTCCGCGGGCCCAGAGCCAAGCTTAATTTTCCACTTGTCGATGAATCCCTTAAGCGTACTGTTGAGGAACCAGAAGAAGTGGTTGTTCATGTAAAGGATGAGAATATGAATGAAGAAATGCAAATTGGGAATAATTGGGAATGTGATTTTTGGGATAGTATTGGGGAAGAAGCTGATTTTCAACAACTTATGAGGTTTATGGATTCTTCTGATTCTAGAACAGGAAACACTTTTAATTAG

Protein sequence

>MS.gene053501.t1

MNYSFSTTTLTSDQELSVIVAALTNVVSGPTSTVGSSSCLEQIVQPAVNMETCRECNIAGCLGCNFFPEEKKQKQRRAKNNKYRGVRQRPWGKWAAEIRDPRRAVRVWLGTFTTAEEAARAYDNAAIEFRGPRAKLNFPLVDESLKRTVEEPEEVVVHVKDENMNEEMQIGNNWECDFWDSIGEEADFQQLMRFMDSSDSRTGNTFN