Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35567.t1 | XP_013460933.1 | 89.1 | 421 | 39 | 1 | 1 | 421 | 1 | 414 | 4.10E-217 | 763.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35567.t1 | Q68FP5 | 39.0 | 277 | 144 | 4 | 2 | 277 | 23 | 275 | 3.0e-43 | 177.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35567.t1 | A0A072UZJ7 | 89.1 | 421 | 39 | 1 | 1 | 421 | 1 | 414 | 2.9e-217 | 763.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene024701 | MS.gene35567 | PPI |
| MS.gene21679 | MS.gene35567 | PPI |
| MS.gene21951 | MS.gene35567 | PPI |
| MS.gene22289 | MS.gene35567 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35567.t1 | MTR_3g074980 | 94.062 | 421 | 18 | 2 | 1 | 421 | 1 | 414 | 0.0 | 822 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35567.t1 | AT4G24880 | 66.110 | 419 | 138 | 3 | 1 | 419 | 1 | 415 | 0.0 | 570 |
| MS.gene35567.t1 | AT4G24880 | 67.463 | 335 | 106 | 2 | 1 | 335 | 1 | 332 | 1.09e-163 | 464 |
Find 116 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGTTTAGTTCCAGTTTA+TGG | 0.130864 | 3.3:-64579106 | MS.gene35567:CDS |
| CTTTCCAAACCAGGTGGTTT+TGG | 0.139058 | 3.3:-64577527 | MS.gene35567:intron |
| CGGTTTCAGGTTCGGGAGTT+TGG | 0.153915 | 3.3:+64580357 | None:intergenic |
| CTTCTGAATTCAGGTTCTTT+TGG | 0.158903 | 3.3:-64579192 | MS.gene35567:CDS |
| GACGATCCTCCTTTGGTATT+TGG | 0.178884 | 3.3:-64577472 | MS.gene35567:CDS |
| TCGTGGTTAGGTTCGGTTTC+AGG | 0.179179 | 3.3:+64580344 | None:intergenic |
| ACTTAGATTTGATGATCTTT+TGG | 0.228621 | 3.3:-64576204 | MS.gene35567:CDS |
| GCTTATCGTTGTTCCATTAC+TGG | 0.239378 | 3.3:+64580029 | None:intergenic |
| ATGATTGTACTTCTGAATTC+AGG | 0.254101 | 3.3:-64579201 | MS.gene35567:CDS |
| AACTTACTACGTTATTGATA+TGG | 0.264664 | 3.3:-64579248 | MS.gene35567:CDS |
| TCGGGTTGGGGTTGGAGTTC+CGG | 0.267657 | 3.3:+64580320 | None:intergenic |
| TTGCAAGACCTTCTGGAAAA+AGG | 0.304113 | 3.3:-64580065 | MS.gene35567:CDS |
| ATTCTGATGTGGTTCGGGTT+GGG | 0.310675 | 3.3:+64580307 | None:intergenic |
| TCCTTTGGTATTTGGCTGTT+TGG | 0.311832 | 3.3:-64577464 | MS.gene35567:CDS |
| GTTAGGTTCGGTTTCAGGTT+CGG | 0.315002 | 3.3:+64580349 | None:intergenic |
| TTAGGTTCGGTTTCAGGTTC+GGG | 0.318593 | 3.3:+64580350 | None:intergenic |
| TCCTTTGTTCTTGCTCCGTT+TGG | 0.321806 | 3.3:+64579961 | None:intergenic |
| GCTCCGTTTGGCAATTTAGA+AGG | 0.332034 | 3.3:+64579973 | None:intergenic |
| TCGTCATTCTGATGTGGTTC+GGG | 0.352587 | 3.3:+64580302 | None:intergenic |
| TTCGTCATTCTGATGTGGTT+CGG | 0.356306 | 3.3:+64580301 | None:intergenic |
| TTCTGATGTGGTTCGGGTTG+GGG | 0.359746 | 3.3:+64580308 | None:intergenic |
| TGGAGTTCCGGTTCGTGGTT+AGG | 0.369640 | 3.3:+64580332 | None:intergenic |
| CTCCAATTGCAAACCGTAGA+AGG | 0.370502 | 3.3:+64576911 | None:intergenic |
| AAGGCGCTGAAGCTCGAAAA+TGG | 0.372980 | 3.3:-64580250 | MS.gene35567:CDS |
| TTCGGGATGCATGAGTTGTT+TGG | 0.375775 | 3.3:+64580223 | None:intergenic |
| TTACGCCGTTAGCATTAGTT+TGG | 0.386696 | 3.3:-64578717 | MS.gene35567:CDS |
| GGGAGTGTCGAACACTATAT+TGG | 0.391542 | 3.3:+64576228 | None:intergenic |
| TACCTTCTACGGTTTGCAAT+TGG | 0.391797 | 3.3:-64576913 | MS.gene35567:CDS |
| GGTTTCAGGTTCGGGAGTTT+GGG | 0.393642 | 3.3:+64580358 | None:intergenic |
| AGGAATATCGATCATCCATT+CGG | 0.395922 | 3.3:+64580205 | None:intergenic |
| CTCTGATCACAACCATAAAC+TGG | 0.400900 | 3.3:+64579094 | None:intergenic |
| AACTCTAAGCTTGCTGAAAC+CGG | 0.402317 | 3.3:-64579166 | MS.gene35567:CDS |
| CGCTGCTGATAGTTTCTCTA+AGG | 0.405302 | 3.3:-64576809 | MS.gene35567:intron |
| GGTCTACTTTCTTGATCTGC+TGG | 0.409750 | 3.3:+64576167 | None:intergenic |
| TGCACTCAGGGTACCTTCTA+CGG | 0.414316 | 3.3:-64576924 | MS.gene35567:CDS |
| CTGAAAATCTCACCAATGAT+TGG | 0.417671 | 3.3:-64580184 | MS.gene35567:intron |
| CATTCTGATGTGGTTCGGGT+TGG | 0.422805 | 3.3:+64580306 | None:intergenic |
| GAGACTAAAGGGCGCTTGAA+TGG | 0.424890 | 3.3:+64580494 | None:intergenic |
| GATGTGGTTCGGGTTGGGGT+TGG | 0.426758 | 3.3:+64580312 | None:intergenic |
| AAACTGCAGTCAATATGTTA+TGG | 0.427633 | 3.3:-64578686 | MS.gene35567:CDS |
| AGAGTAAGAATTTGAAGAAC+CGG | 0.432662 | 3.3:+64579930 | None:intergenic |
| CACCTGCGACGATCCTCCTT+TGG | 0.436144 | 3.3:-64577479 | MS.gene35567:CDS |
| GAAAACACCTGCTGTTGGTT+AGG | 0.438848 | 3.3:+64578640 | None:intergenic |
| AAAAGAAAATTACCAATCAT+TGG | 0.442547 | 3.3:+64580172 | None:intergenic |
| ACGATAAGCCGTTTGAGAAA+CGG | 0.443992 | 3.3:-64580015 | MS.gene35567:CDS |
| ACGTTATTGATATGGTTTGT+TGG | 0.445699 | 3.3:-64579240 | MS.gene35567:CDS |
| TTCCGGTTCGTGGTTAGGTT+CGG | 0.446218 | 3.3:+64580337 | None:intergenic |
| AAAGCTGATCTACAGTATCT+TGG | 0.453395 | 3.3:-64576853 | MS.gene35567:CDS |
| GGGGTTGGAGTTCCGGTTCG+TGG | 0.456344 | 3.3:+64580327 | None:intergenic |
| TGCAATTGGAGAGGGAGGAT+TGG | 0.456735 | 3.3:-64576899 | MS.gene35567:CDS |
| TTGTCTGCGTCGCTCTTGAT+CGG | 0.458152 | 3.3:+64580472 | None:intergenic |
| GAATTGAACCGTTTCTCAAA+CGG | 0.461223 | 3.3:+64580007 | None:intergenic |
| GGACGGAAGCTTCATGCAGC+AGG | 0.467201 | 3.3:-64577443 | MS.gene35567:intron |
| GGAATATCGATCATCCATTC+GGG | 0.471213 | 3.3:+64580206 | None:intergenic |
| AGCAGCGGCACGAGCTCGAT+TGG | 0.471276 | 3.3:+64576825 | None:intergenic |
| CGCTCTTGATCGGAGACTAA+AGG | 0.480262 | 3.3:+64580482 | None:intergenic |
| CCTTAGGCATGCACATTACC+AGG | 0.482412 | 3.3:-64578746 | MS.gene35567:intron |
| CGGAGATCGTGCGGCGCCAT+GGG | 0.487792 | 3.3:+64580521 | None:intergenic |
| GCTCTTGATCGGAGACTAAA+GGG | 0.489934 | 3.3:+64580483 | None:intergenic |
| AACCGAACCTAACCACGAAC+CGG | 0.497363 | 3.3:-64580339 | MS.gene35567:CDS |
| TTGGCAATTTAGAAGGAAAA+CGG | 0.498723 | 3.3:+64579980 | None:intergenic |
| AGAAGACCGTCTTTGACATA+AGG | 0.503368 | 3.3:+64579040 | None:intergenic |
| GCCGTTAGCATTAGTTTGGA+AGG | 0.509100 | 3.3:-64578713 | MS.gene35567:CDS |
| GGCATGCACATTACCAGGCT+GGG | 0.511928 | 3.3:-64578741 | MS.gene35567:CDS |
| AGGCATGCACATTACCAGGC+TGG | 0.517727 | 3.3:-64578742 | MS.gene35567:CDS |
| AGGTTCGGGAGTTTGGGAAG+AGG | 0.518462 | 3.3:+64580364 | None:intergenic |
| TTGGTATTTGGCTGTTTGGA+CGG | 0.526548 | 3.3:-64577460 | MS.gene35567:CDS |
| TTCGGGAGTTTGGGAAGAGG+AGG | 0.527111 | 3.3:+64580367 | None:intergenic |
| CGAAGGAGGGTCAAAGGCAC+CGG | 0.531623 | 3.3:+64579147 | None:intergenic |
| AAAGATCATCAAATCTAAGT+GGG | 0.541300 | 3.3:+64576207 | None:intergenic |
| TGCAGTCAGATCTGCACTCA+GGG | 0.541927 | 3.3:-64576936 | MS.gene35567:intron |
| TTGCAGTCAGATCTGCACTC+AGG | 0.544181 | 3.3:-64576937 | MS.gene35567:intron |
| CTAAAGGGCGCTTGAATGGA+CGG | 0.548057 | 3.3:+64580498 | None:intergenic |
| CTACGGTTTGCAATTGGAGA+GGG | 0.548982 | 3.3:-64576907 | MS.gene35567:CDS |
| AGAGGAGGAGAGAGAGAATG+CGG | 0.550078 | 3.3:+64580382 | None:intergenic |
| CGGTTTGCAATTGGAGAGGG+AGG | 0.551117 | 3.3:-64576904 | MS.gene35567:CDS |
| TTTCCTTCTAAATTGCCAAA+CGG | 0.551675 | 3.3:-64579976 | MS.gene35567:CDS |
| GGAGGAGAGAGAGAATGCGG+TGG | 0.552403 | 3.3:+64580385 | None:intergenic |
| AAAAGATCATCAAATCTAAG+TGG | 0.556674 | 3.3:+64576206 | None:intergenic |
| CGAGGCGATTATGTGCTTGA+CGG | 0.559403 | 3.3:+64580438 | None:intergenic |
| CTAGAAGCTTCGAAGCTGAA+AGG | 0.568030 | 3.3:-64580269 | MS.gene35567:CDS |
| TACCAAAGGAGGATCGTCGC+AGG | 0.578997 | 3.3:+64577477 | None:intergenic |
| ATTCAGAAGTACAATCATAG+AGG | 0.580789 | 3.3:+64579206 | None:intergenic |
| ATAATACGAAGGAGGGTCAA+AGG | 0.582756 | 3.3:+64579141 | None:intergenic |
| AACAACTCATGCATCCCGAA+TGG | 0.584444 | 3.3:-64580220 | MS.gene35567:CDS |
| ATTGATATGGTTTGTTGGCG+TGG | 0.585196 | 3.3:-64579235 | MS.gene35567:CDS |
| TAGACCATGCGACATTGAGA+TGG | 0.588277 | 3.3:-64576150 | MS.gene35567:CDS |
| TCCTTCCAAACTAATGCTAA+CGG | 0.590429 | 3.3:+64578712 | None:intergenic |
| ACAAGTTCCTAACCAACAGC+AGG | 0.594991 | 3.3:-64578647 | MS.gene35567:intron |
| AATGGACGGCGGAGATCGTG+CGG | 0.599780 | 3.3:+64580512 | None:intergenic |
| TACTTATGATAATACGAAGG+AGG | 0.607857 | 3.3:+64579133 | None:intergenic |
| TTCAGAAGTACAATCATAGA+GGG | 0.608465 | 3.3:+64579207 | None:intergenic |
| ACTTATGATAATACGAAGGA+GGG | 0.609161 | 3.3:+64579134 | None:intergenic |
| TCGAGTTCGTCATTCTGATG+TGG | 0.609764 | 3.3:+64580296 | None:intergenic |
| TCTACGGTTTGCAATTGGAG+AGG | 0.611987 | 3.3:-64576908 | MS.gene35567:CDS |
| AATGAGAAAACACCTGCTGT+TGG | 0.612899 | 3.3:+64578635 | None:intergenic |
| AGAACAAAGGATGTTAACTC+CGG | 0.619861 | 3.3:-64579949 | MS.gene35567:CDS |
| CCATCCATCTCAATGTCGCA+TGG | 0.621943 | 3.3:+64576146 | None:intergenic |
| TGATCTACAGTATCTTGGCA+AGG | 0.626076 | 3.3:-64576848 | MS.gene35567:CDS |
| AAACAGCCAAATACCAAAGG+AGG | 0.633701 | 3.3:+64577466 | None:intergenic |
| TCCAAACAGCCAAATACCAA+AGG | 0.635259 | 3.3:+64577463 | None:intergenic |
| CCGTCTTTGACATAAGGCAC+AGG | 0.636086 | 3.3:+64579046 | None:intergenic |
| GCCAAACGGAGCAAGAACAA+AGG | 0.638380 | 3.3:-64579962 | MS.gene35567:CDS |
| GTTATGGACACAGACAGTAA+AGG | 0.638985 | 3.3:-64578670 | MS.gene35567:CDS |
| CTAACGGCGTAATCCCAGCC+TGG | 0.640007 | 3.3:+64578728 | None:intergenic |
| GAGCGTGGCGTTGAGCGTCG+AGG | 0.640208 | 3.3:+64580420 | None:intergenic |
| GTTTATGGTTGTGATCAGAG+TGG | 0.641110 | 3.3:-64579091 | MS.gene35567:CDS |
| CCATGCGACATTGAGATGGA+TGG | 0.649190 | 3.3:-64576146 | MS.gene35567:CDS |
| TGGAAGCTAAGAAGCGAGCG+TGG | 0.655970 | 3.3:+64580405 | None:intergenic |
| CCTGTGCCTTATGTCAAAGA+CGG | 0.659746 | 3.3:-64579046 | MS.gene35567:CDS |
| CAAAGGAGGATCGTCGCAGG+TGG | 0.668481 | 3.3:+64577480 | None:intergenic |
| AAGATCATCAAATCTAAGTG+GGG | 0.672476 | 3.3:+64576208 | None:intergenic |
| CTTAGAGAAACTATCAGCAG+CGG | 0.691380 | 3.3:+64576810 | None:intergenic |
| TTTGACATAAGGCACAGGTG+CGG | 0.707161 | 3.3:+64579051 | None:intergenic |
| CTATACTTATGATAATACGA+AGG | 0.719944 | 3.3:+64579130 | None:intergenic |
| AAGGGCGCTTGAATGGACGG+CGG | 0.768147 | 3.3:+64580501 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTAAAAACTATTTG+TGG | - | chr3.3:64578624-64578643 | MS.gene35567:intron | 10.0% |
| !! | AATGGAAATAATCATAATAA+TGG | + | chr3.3:64578236-64578255 | None:intergenic | 15.0% |
| !! | AGATTAAAAACAAAACAAAT+AGG | + | chr3.3:64580163-64580182 | None:intergenic | 15.0% |
| !! | ATGGAAATAATCATAATAAT+GGG | + | chr3.3:64578235-64578254 | None:intergenic | 15.0% |
| !! | ATGTAAGATTATATAAAATG+TGG | + | chr3.3:64579330-64579349 | None:intergenic | 15.0% |
| !! | ATTAAAATTTGTGTTATGTT+TGG | - | chr3.3:64576819-64576838 | MS.gene35567:CDS | 15.0% |
| !! | TATGAATTAAGTTATTTGTT+TGG | - | chr3.3:64577351-64577370 | MS.gene35567:intron | 15.0% |
| !! | TTAATAATGAAAATGAAAAC+AGG | + | chr3.3:64578750-64578769 | None:intergenic | 15.0% |
| !! | TTGTAATTAAAAGTGAAAAT+AGG | - | chr3.3:64578846-64578865 | MS.gene35567:intron | 15.0% |
| !!! | AAATATCATTTCAAACATTT+TGG | + | chr3.3:64577706-64577725 | None:intergenic | 15.0% |
| !!! | TTTTTGCAAAATTATTATAG+TGG | - | chr3.3:64576893-64576912 | MS.gene35567:CDS | 15.0% |
| !! | AAAACAAAATAAAAACGATG+TGG | - | chr3.3:64578818-64578837 | MS.gene35567:intron | 20.0% |
| !! | AAAAGAAAATTACCAATCAT+TGG | + | chr3.3:64576491-64576510 | None:intergenic | 20.0% |
| !! | AATAAGATTAAAACAGCTTA+TGG | - | chr3.3:64577096-64577115 | MS.gene35567:intron | 20.0% |
| !! | ATCAGAAAAAAAATTCAGAA+CGG | + | chr3.3:64579266-64579285 | None:intergenic | 20.0% |
| !! | TAATCATTTGAAAAACTGTT+TGG | + | chr3.3:64577151-64577170 | None:intergenic | 20.0% |
| !! | TCTGAAAGATTAAGAATATT+GGG | + | chr3.3:64577790-64577809 | None:intergenic | 20.0% |
| !! | TTAAAAGTGAAAATAGGAAA+TGG | - | chr3.3:64578852-64578871 | MS.gene35567:intron | 20.0% |
| !! | TTTCATGAATAATCATTGTT+TGG | - | chr3.3:64580233-64580252 | MS.gene35567:CDS | 20.0% |
| !!! | ATAATCTTACATGTTTTTCT+AGG | - | chr3.3:64579338-64579357 | MS.gene35567:intron | 20.0% |
| !!! | TAATCCAAACATACATTTTT+AGG | - | chr3.3:64576934-64576953 | MS.gene35567:CDS | 20.0% |
| !!! | TGTTTTATTAATCAGTTTTC+TGG | - | chr3.3:64579110-64579129 | MS.gene35567:CDS | 20.0% |
| !!! | TTCTGAAAGATTAAGAATAT+TGG | + | chr3.3:64577791-64577810 | None:intergenic | 20.0% |
| !!! | TTTTAAAAACTATTTGTGGA+GGG | - | chr3.3:64578628-64578647 | MS.gene35567:intron | 20.0% |
| !!! | TTTTGAATTTCTGAATTTTC+AGG | - | chr3.3:64576565-64576584 | MS.gene35567:intron | 20.0% |
| !!! | TTTTTAAAAACTATTTGTGG+AGG | - | chr3.3:64578627-64578646 | MS.gene35567:intron | 20.0% |
| ! | AAAAGATCATCAAATCTAAG+TGG | + | chr3.3:64580339-64580358 | None:intergenic | 25.0% |
| ! | AAAATTATTCATGAACAGAC+TGG | + | chr3.3:64577738-64577757 | None:intergenic | 25.0% |
| ! | AAAGATCATCAAATCTAAGT+GGG | + | chr3.3:64580338-64580357 | None:intergenic | 25.0% |
| ! | AAAGCCTAAAAATGTATGTT+TGG | + | chr3.3:64576941-64576960 | None:intergenic | 25.0% |
| ! | AAATTATGATGGTCAGAATT+CGG | - | chr3.3:64578576-64578595 | MS.gene35567:intron | 25.0% |
| ! | AACTTACTACGTTATTGATA+TGG | - | chr3.3:64577412-64577431 | MS.gene35567:intron | 25.0% |
| ! | ATATACACACAGTGATAAAA+TGG | + | chr3.3:64578066-64578085 | None:intergenic | 25.0% |
| ! | ATGAATAATCATTGTTTGGT+TGG | - | chr3.3:64580237-64580256 | MS.gene35567:CDS | 25.0% |
| ! | ATGTTAGATCTAACTTCTAA+GGG | + | chr3.3:64578908-64578927 | None:intergenic | 25.0% |
| ! | CTATACTTATGATAATACGA+AGG | + | chr3.3:64577533-64577552 | None:intergenic | 25.0% |
| ! | GAAAGTTAGATTAGATTTCT+TGG | + | chr3.3:64579698-64579717 | None:intergenic | 25.0% |
| ! | GAACTTTAATTATCATTCTC+AGG | + | chr3.3:64580028-64580047 | None:intergenic | 25.0% |
| ! | GCATAATCTTGAAATTATGA+TGG | - | chr3.3:64578565-64578584 | MS.gene35567:intron | 25.0% |
| ! | GGTTAAATATTAGATGACAA+CGG | - | chr3.3:64578340-64578359 | MS.gene35567:intron | 25.0% |
| ! | TTACAACAGTAACAATGTAA+AGG | - | chr3.3:64578692-64578711 | MS.gene35567:CDS | 25.0% |
| ! | TTTAGTAGATTTCTATACCT+TGG | - | chr3.3:64578106-64578125 | MS.gene35567:intron | 25.0% |
| !!! | ACTTAGATTTGATGATCTTT+TGG | - | chr3.3:64580338-64580357 | MS.gene35567:CDS | 25.0% |
| !!! | CTTAGATTTGATGATCTTTT+GGG | - | chr3.3:64580339-64580358 | MS.gene35567:CDS | 25.0% |
| !!! | TCATTTCAAACATTTTGGAA+TGG | + | chr3.3:64577701-64577720 | None:intergenic | 25.0% |
| AAACTGCAGTCAATATGTTA+TGG | - | chr3.3:64577974-64577993 | MS.gene35567:intron | 30.0% | |
| AAATGATCAAAGAAGCAACA+AGG | + | chr3.3:64580056-64580075 | None:intergenic | 30.0% | |
| AACTTATGGTTTAAGGGATT+AGG | - | chr3.3:64576844-64576863 | MS.gene35567:CDS | 30.0% | |
| AAGAGCCTAACAAGTTAAAA+AGG | + | chr3.3:64577858-64577877 | None:intergenic | 30.0% | |
| AAGATCATCAAATCTAAGTG+GGG | + | chr3.3:64580337-64580356 | None:intergenic | 30.0% | |
| ACTTAATTCATATACACCGT+CGG | + | chr3.3:64577343-64577362 | None:intergenic | 30.0% | |
| ACTTATGATAATACGAAGGA+GGG | + | chr3.3:64577529-64577548 | None:intergenic | 30.0% | |
| ACTTATGGTTTAAGGGATTA+GGG | - | chr3.3:64576845-64576864 | MS.gene35567:CDS | 30.0% | |
| ACTTGATAGAACATGTCAAA+TGG | + | chr3.3:64578254-64578273 | None:intergenic | 30.0% | |
| AGAGCCTAACAAGTTAAAAA+GGG | + | chr3.3:64577857-64577876 | None:intergenic | 30.0% | |
| AGAGTAAGAATTTGAAGAAC+CGG | + | chr3.3:64576733-64576752 | None:intergenic | 30.0% | |
| ATGAAAATAGTGTGACTGAT+GGG | + | chr3.3:64580219-64580238 | None:intergenic | 30.0% | |
| ATGATTGTACTTCTGAATTC+AGG | - | chr3.3:64577459-64577478 | MS.gene35567:CDS | 30.0% | |
| ATGTATAAATGTCTGACAAG+GGG | + | chr3.3:64578173-64578192 | None:intergenic | 30.0% | |
| CATGTTAGATCTAACTTCTA+AGG | + | chr3.3:64578909-64578928 | None:intergenic | 30.0% | |
| GAGAAGTAAGATTTCTTACT+GGG | - | chr3.3:64579379-64579398 | MS.gene35567:intron | 30.0% | |
| GATGTATAAATGTCTGACAA+GGG | + | chr3.3:64578174-64578193 | None:intergenic | 30.0% | |
| GGCGAAAATTAAATGAATCA+TGG | + | chr3.3:64579934-64579953 | None:intergenic | 30.0% | |
| TAACTAATAATGCCAAGTCT+TGG | - | chr3.3:64577822-64577841 | MS.gene35567:intron | 30.0% | |
| TACTTATGATAATACGAAGG+AGG | + | chr3.3:64577530-64577549 | None:intergenic | 30.0% | |
| TGAGAAGTAAGATTTCTTAC+TGG | - | chr3.3:64579378-64579397 | MS.gene35567:intron | 30.0% | |
| TGATGCTTAATCTAGTTATG+AGG | - | chr3.3:64579282-64579301 | MS.gene35567:intron | 30.0% | |
| TGATGTATAAATGTCTGACA+AGG | + | chr3.3:64578175-64578194 | None:intergenic | 30.0% | |
| TTCATAGCACTTCAGTATAT+TGG | + | chr3.3:64579471-64579490 | None:intergenic | 30.0% | |
| TTCTTAGTAAGAGAAATGCT+AGG | + | chr3.3:64579636-64579655 | None:intergenic | 30.0% | |
| TTGACACATGAATGAATTTG+TGG | + | chr3.3:64579039-64579058 | None:intergenic | 30.0% | |
| TTGGCAATTTAGAAGGAAAA+CGG | + | chr3.3:64576683-64576702 | None:intergenic | 30.0% | |
| TTGGTGAACTTATGGTTTAA+GGG | - | chr3.3:64576838-64576857 | MS.gene35567:CDS | 30.0% | |
| TTTCCTTCTAAATTGCCAAA+CGG | - | chr3.3:64576684-64576703 | MS.gene35567:intron | 30.0% | |
| TTTGGTGAACTTATGGTTTA+AGG | - | chr3.3:64576837-64576856 | MS.gene35567:CDS | 30.0% | |
| ! | ACGTTATTGATATGGTTTGT+TGG | - | chr3.3:64577420-64577439 | MS.gene35567:intron | 30.0% |
| ! | AGAAGTTTTCTTCAGACAAA+CGG | + | chr3.3:64580192-64580211 | None:intergenic | 30.0% |
| ! | ATTCAGAAGTACAATCATAG+AGG | + | chr3.3:64577457-64577476 | None:intergenic | 30.0% |
| ! | GACTCAATACAACTTTAAAG+AGG | - | chr3.3:64579005-64579024 | MS.gene35567:intron | 30.0% |
| ! | TGTTATGTTTGGTGAACTTA+TGG | - | chr3.3:64576830-64576849 | MS.gene35567:CDS | 30.0% |
| ! | TTCAGAAGTACAATCATAGA+GGG | + | chr3.3:64577456-64577475 | None:intergenic | 30.0% |
| ! | TTCAGTTTAGTTCCAGTTTA+TGG | - | chr3.3:64577554-64577573 | MS.gene35567:intron | 30.0% |
| !! | GTTAGATTTTTGGATACAGT+AGG | - | chr3.3:64580099-64580118 | MS.gene35567:intron | 30.0% |
| !! | TGATAGTTTCTCTAAGGTAA+GGG | - | chr3.3:64579857-64579876 | MS.gene35567:intron | 30.0% |
| !! | TTCTGAATTCAGGTTCTTTT+GGG | - | chr3.3:64577469-64577488 | MS.gene35567:CDS | 30.0% |
| !!! | AACTTGTTAGGCTCTTATTT+TGG | - | chr3.3:64577862-64577881 | MS.gene35567:intron | 30.0% |
| !!! | ACTTGTTAGGCTCTTATTTT+GGG | - | chr3.3:64577863-64577882 | MS.gene35567:intron | 30.0% |
| !!! | CTTTTTTTTGCAAGAAGCTT+CGG | + | chr3.3:64578478-64578497 | None:intergenic | 30.0% |
| !!! | TGTTTTTTTGCAATAACAGC+AGG | - | chr3.3:64577385-64577404 | MS.gene35567:intron | 30.0% |
| !!! | TTTCCCCTTTTTAACTTGTT+AGG | - | chr3.3:64577850-64577869 | MS.gene35567:intron | 30.0% |
| AAAGCTGATCTACAGTATCT+TGG | - | chr3.3:64579807-64579826 | MS.gene35567:intron | 35.0% | |
| AAATCTAACCAATCTCGTGA+CGG | + | chr3.3:64580088-64580107 | None:intergenic | 35.0% | |
| ACTCTAATACTCACTCTCAT+TGG | - | chr3.3:64579506-64579525 | MS.gene35567:intron | 35.0% | |
| AGAAAATAGTAGTCACCTCA+TGG | + | chr3.3:64576773-64576792 | None:intergenic | 35.0% | |
| AGAACAAAGGATGTTAACTC+CGG | - | chr3.3:64576711-64576730 | MS.gene35567:intron | 35.0% | |
| AGGAATATCGATCATCCATT+CGG | + | chr3.3:64576458-64576477 | None:intergenic | 35.0% | |
| AGTGAAATATGCAGTGTGTT+TGG | - | chr3.3:64578411-64578430 | MS.gene35567:intron | 35.0% | |
| ATGTTCTATCAAGTTTCCAG+AGG | - | chr3.3:64578260-64578279 | MS.gene35567:intron | 35.0% | |
| CACTATATTGGAACATAACC+TGG | + | chr3.3:64580305-64580324 | None:intergenic | 35.0% | |
| CATCTCTAGTGATTCTATGA+AGG | - | chr3.3:64578543-64578562 | MS.gene35567:intron | 35.0% | |
| CATGAAAATAGTGTGACTGA+TGG | + | chr3.3:64580220-64580239 | None:intergenic | 35.0% | |
| CTAACACTCACTCTTCTATT+GGG | + | chr3.3:64579603-64579622 | None:intergenic | 35.0% | |
| CTATTGGGTTAAACACATGT+GGG | + | chr3.3:64579588-64579607 | None:intergenic | 35.0% | |
| CTCTAATACTCACTCTCATT+GGG | - | chr3.3:64579507-64579526 | MS.gene35567:intron | 35.0% | |
| CTGAAAATCTCACCAATGAT+TGG | - | chr3.3:64576476-64576495 | MS.gene35567:intron | 35.0% | |
| GAATTGAACCGTTTCTCAAA+CGG | + | chr3.3:64576656-64576675 | None:intergenic | 35.0% | |
| GAGCCTAACAAGTTAAAAAG+GGG | + | chr3.3:64577856-64577875 | None:intergenic | 35.0% | |
| TAAGACGAGATGCAGATAAA+GGG | + | chr3.3:64577212-64577231 | None:intergenic | 35.0% | |
| TACAAGCAAGCAATGTTTCA+TGG | - | chr3.3:64578319-64578338 | MS.gene35567:intron | 35.0% | |
| TCATTGGGTGAAATTCATGT+GGG | - | chr3.3:64579522-64579541 | MS.gene35567:intron | 35.0% | |
| TCCTTCCAAACTAATGCTAA+CGG | + | chr3.3:64577951-64577970 | None:intergenic | 35.0% | |
| TCTATTGGGTTAAACACATG+TGG | + | chr3.3:64579589-64579608 | None:intergenic | 35.0% | |
| TTGAAACTGTGTACAACTTG+AGG | - | chr3.3:64578659-64578678 | MS.gene35567:CDS | 35.0% | |
| TTGGAATGGCATTCACATAT+TGG | + | chr3.3:64577687-64577706 | None:intergenic | 35.0% | |
| ! | AACAGGATGCAGATACTTTT+AGG | + | chr3.3:64579899-64579918 | None:intergenic | 35.0% |
| ! | ACAAAACACCTTTTTCCAGA+AGG | + | chr3.3:64576606-64576625 | None:intergenic | 35.0% |
| ! | ACAGGATGCAGATACTTTTA+GGG | + | chr3.3:64579898-64579917 | None:intergenic | 35.0% |
| ! | CAATCATTGGTGAGATTTTC+AGG | + | chr3.3:64576478-64576497 | None:intergenic | 35.0% |
| ! | TGTTTTGTGGTTTCCAGTAA+TGG | - | chr3.3:64576618-64576637 | MS.gene35567:intron | 35.0% |
| !! | CACGAGATTGGTTAGATTTT+TGG | - | chr3.3:64580089-64580108 | MS.gene35567:intron | 35.0% |
| !! | CTGATAGTTTCTCTAAGGTA+AGG | - | chr3.3:64579856-64579875 | MS.gene35567:intron | 35.0% |
| !! | CTTCTGAATTCAGGTTCTTT+TGG | - | chr3.3:64577468-64577487 | MS.gene35567:CDS | 35.0% |
| !!! | TTCTGGAAAAAGGTGTTTTG+TGG | - | chr3.3:64576605-64576624 | MS.gene35567:intron | 35.0% |
| !!! | TTTGTTTTTGCAAGACCTTC+TGG | - | chr3.3:64576588-64576607 | MS.gene35567:intron | 35.0% |
| AAACAGCCAAATACCAAAGG+AGG | + | chr3.3:64579197-64579216 | None:intergenic | 40.0% | |
| AATGAGAAAACACCTGCTGT+TGG | + | chr3.3:64578028-64578047 | None:intergenic | 40.0% | |
| ACGATAAGCCGTTTGAGAAA+CGG | - | chr3.3:64576645-64576664 | MS.gene35567:intron | 40.0% | |
| AGAAGACCGTCTTTGACATA+AGG | + | chr3.3:64577623-64577642 | None:intergenic | 40.0% | |
| AGCCAAATCTTAGCATGCAA+TGG | + | chr3.3:64579955-64579974 | None:intergenic | 40.0% | |
| ATAATACGAAGGAGGGTCAA+AGG | + | chr3.3:64577522-64577541 | None:intergenic | 40.0% | |
| CAAGAAGTCGAGCAAAAACA+AGG | + | chr3.3:64578787-64578806 | None:intergenic | 40.0% | |
| CATGAATGAATTTGTGGACC+TGG | + | chr3.3:64579033-64579052 | None:intergenic | 40.0% | |
| CATTGCTTGCTTGTACACTA+CGG | + | chr3.3:64578314-64578333 | None:intergenic | 40.0% | |
| CATTTCTCCATCTATACCTC+TGG | + | chr3.3:64578279-64578298 | None:intergenic | 40.0% | |
| CTAAGACGAGATGCAGATAA+AGG | + | chr3.3:64577213-64577232 | None:intergenic | 40.0% | |
| CTCATTGGGTGAAATTCATG+TGG | - | chr3.3:64579521-64579540 | MS.gene35567:intron | 40.0% | |
| CTCTGATCACAACCATAAAC+TGG | + | chr3.3:64577569-64577588 | None:intergenic | 40.0% | |
| CTTAGAGAAACTATCAGCAG+CGG | + | chr3.3:64579853-64579872 | None:intergenic | 40.0% | |
| CTTTATCTGCATCTCGTCTT+AGG | - | chr3.3:64577211-64577230 | MS.gene35567:intron | 40.0% | |
| GAAATGGATCCCACATAAAG+TGG | - | chr3.3:64579557-64579576 | MS.gene35567:intron | 40.0% | |
| GCTAACACTCACTCTTCTAT+TGG | + | chr3.3:64579604-64579623 | None:intergenic | 40.0% | |
| GCTTATCGTTGTTCCATTAC+TGG | + | chr3.3:64576634-64576653 | None:intergenic | 40.0% | |
| GCTTATTTGAGCTTATCTGC+TGG | + | chr3.3:64577176-64577195 | None:intergenic | 40.0% | |
| GGAATATCGATCATCCATTC+GGG | + | chr3.3:64576457-64576476 | None:intergenic | 40.0% | |
| GTTATGGACACAGACAGTAA+AGG | - | chr3.3:64577990-64578009 | MS.gene35567:intron | 40.0% | |
| GTTTATGGTTGTGATCAGAG+TGG | - | chr3.3:64577569-64577588 | MS.gene35567:intron | 40.0% | |
| TACCTTCTACGGTTTGCAAT+TGG | - | chr3.3:64579747-64579766 | MS.gene35567:intron | 40.0% | |
| TCCAAACAGCCAAATACCAA+AGG | + | chr3.3:64579200-64579219 | None:intergenic | 40.0% | |
| TCCTTTGGTATTTGGCTGTT+TGG | - | chr3.3:64579196-64579215 | MS.gene35567:CDS | 40.0% | |
| TGATCTACAGTATCTTGGCA+AGG | - | chr3.3:64579812-64579831 | MS.gene35567:intron | 40.0% | |
| TTACGCCGTTAGCATTAGTT+TGG | - | chr3.3:64577943-64577962 | MS.gene35567:intron | 40.0% | |
| TTCGTCATTCTGATGTGGTT+CGG | + | chr3.3:64576362-64576381 | None:intergenic | 40.0% | |
| TTGGTATTTGGCTGTTTGGA+CGG | - | chr3.3:64579200-64579219 | MS.gene35567:CDS | 40.0% | |
| ! | ACTTGACTGCATTTTCCATG+AGG | - | chr3.3:64576755-64576774 | MS.gene35567:intron | 40.0% |
| ! | CAAGTTTCCAGAGGTATAGA+TGG | - | chr3.3:64578269-64578288 | MS.gene35567:intron | 40.0% |
| ! | GCAGCAGGTTTGTTTGAAAT+AGG | - | chr3.3:64579232-64579251 | MS.gene35567:CDS | 40.0% |
| ! | TACAACTTTAAAGAGGCTCC+AGG | - | chr3.3:64579012-64579031 | MS.gene35567:intron | 40.0% |
| ! | TTGCAAGACCTTCTGGAAAA+AGG | - | chr3.3:64576595-64576614 | MS.gene35567:intron | 40.0% |
| !! | AACTCTAAGCTTGCTGAAAC+CGG | - | chr3.3:64577494-64577513 | MS.gene35567:CDS | 40.0% |
| !! | ACTTGGCTTTGTCCATTGAA+GGG | + | chr3.3:64578954-64578973 | None:intergenic | 40.0% |
| !! | ATTGATATGGTTTGTTGGCG+TGG | - | chr3.3:64577425-64577444 | MS.gene35567:intron | 40.0% |
| !! | ATTTGTTATTTCCCCCCCTT+AGG | - | chr3.3:64577898-64577917 | MS.gene35567:intron | 40.0% |
| !!! | GTTTTGGAGCTTCAAGAAGA+TGG | - | chr3.3:64579149-64579168 | MS.gene35567:CDS | 40.0% |
| AACAACTCATGCATCCCGAA+TGG | - | chr3.3:64576440-64576459 | MS.gene35567:intron | 45.0% | |
| ACAAGTTCCTAACCAACAGC+AGG | - | chr3.3:64578013-64578032 | MS.gene35567:intron | 45.0% | |
| ACGAGATGCAGATAAAGGGT+CGG | + | chr3.3:64577208-64577227 | None:intergenic | 45.0% | |
| ATCTGTCAGCTCACTTTGGT+TGG | - | chr3.3:64580362-64580381 | MS.gene35567:CDS | 45.0% | |
| CCTGTGCCTTATGTCAAAGA+CGG | - | chr3.3:64577614-64577633 | MS.gene35567:intron | 45.0% | |
| CGCCATTGCATGCTAAGATT+TGG | - | chr3.3:64579950-64579969 | MS.gene35567:CDS | 45.0% | |
| CGCTGCTGATAGTTTCTCTA+AGG | - | chr3.3:64579851-64579870 | MS.gene35567:intron | 45.0% | |
| CTACGGTTTGCAATTGGAGA+GGG | - | chr3.3:64579753-64579772 | MS.gene35567:intron | 45.0% | |
| CTAGAAGCTTCGAAGCTGAA+AGG | - | chr3.3:64576391-64576410 | MS.gene35567:intron | 45.0% | |
| CTCCAATTGCAAACCGTAGA+AGG | + | chr3.3:64579752-64579771 | None:intergenic | 45.0% | |
| CTTCAATGGACAAAGCCAAG+TGG | - | chr3.3:64578953-64578972 | MS.gene35567:intron | 45.0% | |
| GACGATCCTCCTTTGGTATT+TGG | - | chr3.3:64579188-64579207 | MS.gene35567:CDS | 45.0% | |
| GATGCAGTGTTCAATCACCA+AGG | + | chr3.3:64578126-64578145 | None:intergenic | 45.0% | |
| GCTCCGTTTGGCAATTTAGA+AGG | + | chr3.3:64576690-64576709 | None:intergenic | 45.0% | |
| GCTCTTGATCGGAGACTAAA+GGG | + | chr3.3:64576180-64576199 | None:intergenic | 45.0% | |
| GGGGAAAATTGACCAAGACT+TGG | + | chr3.3:64577837-64577856 | None:intergenic | 45.0% | |
| GGTCTACTTTCTTGATCTGC+TGG | + | chr3.3:64580496-64580515 | None:intergenic | 45.0% | |
| GTGAAAGCTCTTTACACCGA+CGG | - | chr3.3:64577324-64577343 | MS.gene35567:intron | 45.0% | |
| TAGACCATGCGACATTGAGA+TGG | - | chr3.3:64580510-64580529 | MS.gene35567:CDS | 45.0% | |
| TCCTTTGTTCTTGCTCCGTT+TGG | + | chr3.3:64576702-64576721 | None:intergenic | 45.0% | |
| TCGAGTTCGTCATTCTGATG+TGG | + | chr3.3:64576367-64576386 | None:intergenic | 45.0% | |
| TCGTCATTCTGATGTGGTTC+GGG | + | chr3.3:64576361-64576380 | None:intergenic | 45.0% | |
| TCTACGGTTTGCAATTGGAG+AGG | - | chr3.3:64579752-64579771 | MS.gene35567:intron | 45.0% | |
| TGCATCGTGTACGAATCGTT+GGG | - | chr3.3:64578140-64578159 | MS.gene35567:intron | 45.0% | |
| TGGGATCCATTTCCAAAGTG+TGG | + | chr3.3:64579550-64579569 | None:intergenic | 45.0% | |
| TTCATGTGGGTACCACACTT+TGG | - | chr3.3:64579535-64579554 | MS.gene35567:intron | 45.0% | |
| TTCGGGATGCATGAGTTGTT+TGG | + | chr3.3:64576440-64576459 | None:intergenic | 45.0% | |
| TTTGACATAAGGCACAGGTG+CGG | + | chr3.3:64577612-64577631 | None:intergenic | 45.0% | |
| ! | ATTCTGATGTGGTTCGGGTT+GGG | + | chr3.3:64576356-64576375 | None:intergenic | 45.0% |
| ! | CTGGTAATGTGCATGCCTAA+GGG | + | chr3.3:64577916-64577935 | None:intergenic | 45.0% |
| ! | CTTTCCAAACCAGGTGGTTT+TGG | - | chr3.3:64579133-64579152 | MS.gene35567:CDS | 45.0% |
| ! | GAAAACACCTGCTGTTGGTT+AGG | + | chr3.3:64578023-64578042 | None:intergenic | 45.0% |
| ! | GCCGTTAGCATTAGTTTGGA+AGG | - | chr3.3:64577947-64577966 | MS.gene35567:intron | 45.0% |
| ! | TGGGTACCACACTTTGGAAA+TGG | - | chr3.3:64579541-64579560 | MS.gene35567:intron | 45.0% |
| ! | TGGTAATGTGCATGCCTAAG+GGG | + | chr3.3:64577915-64577934 | None:intergenic | 45.0% |
| ! | TGTTGCGATTTTGCACTTCC+AGG | - | chr3.3:64580284-64580303 | MS.gene35567:CDS | 45.0% |
| !! | ACCAATCTCGTGACGGATAT+TGG | + | chr3.3:64580081-64580100 | None:intergenic | 45.0% |
| !! | CACTTGGCTTTGTCCATTGA+AGG | + | chr3.3:64578955-64578974 | None:intergenic | 45.0% |
| !! | GGGAGTGTCGAACACTATAT+TGG | + | chr3.3:64580317-64580336 | None:intergenic | 45.0% |
| !! | GTTAGGTTCGGTTTCAGGTT+CGG | + | chr3.3:64576314-64576333 | None:intergenic | 45.0% |
| !! | TTAGGTTCGGTTTCAGGTTC+GGG | + | chr3.3:64576313-64576332 | None:intergenic | 45.0% |
| !!! | AGAGGGAGGATTGGTTTTGT+TGG | - | chr3.3:64579770-64579789 | MS.gene35567:intron | 45.0% |
| !!! | GGAGGATTGGTTTTGTTGGA+TGG | - | chr3.3:64579774-64579793 | MS.gene35567:intron | 45.0% |
| !!! | GTTTTCTGGCTTTCCAAACC+AGG | - | chr3.3:64579124-64579143 | MS.gene35567:CDS | 45.0% |
| !! | TTTCTTTAATAAATTTATAA+TGG | - | chr3.3:64578202-64578221 | MS.gene35567:intron | 5.0% |
| AACCGAACCTAACCACGAAC+CGG | - | chr3.3:64576321-64576340 | MS.gene35567:intron | 50.0% | |
| AGAGGAGGAGAGAGAGAATG+CGG | + | chr3.3:64576281-64576300 | None:intergenic | 50.0% | |
| AGAGGGTAGACAAGTCCACT+TGG | + | chr3.3:64578971-64578990 | None:intergenic | 50.0% | |
| AGCTCCAAAACCACCTGGTT+TGG | + | chr3.3:64579140-64579159 | None:intergenic | 50.0% | |
| ATGCAGATAAAGGGTCGGTC+TGG | + | chr3.3:64577203-64577222 | None:intergenic | 50.0% | |
| CCATCCATCTCAATGTCGCA+TGG | + | chr3.3:64580517-64580536 | None:intergenic | 50.0% | |
| CCATGCGACATTGAGATGGA+TGG | - | chr3.3:64580514-64580533 | MS.gene35567:CDS | 50.0% | |
| CCGTCTTTGACATAAGGCAC+AGG | + | chr3.3:64577617-64577636 | None:intergenic | 50.0% | |
| CCTTAGGCATGCACATTACC+AGG | - | chr3.3:64577914-64577933 | MS.gene35567:intron | 50.0% | |
| CGAGGCGATTATGTGCTTGA+CGG | + | chr3.3:64576225-64576244 | None:intergenic | 50.0% | |
| CGCTCTTGATCGGAGACTAA+AGG | + | chr3.3:64576181-64576200 | None:intergenic | 50.0% | |
| CTGCATCGTGTACGAATCGT+TGG | - | chr3.3:64578139-64578158 | MS.gene35567:intron | 50.0% | |
| CTTGAAGCTCCAAAACCACC+TGG | + | chr3.3:64579145-64579164 | None:intergenic | 50.0% | |
| GATAAAGGGTCGGTCTGGAT+TGG | + | chr3.3:64577198-64577217 | None:intergenic | 50.0% | |
| GCCAAACGGAGCAAGAACAA+AGG | - | chr3.3:64576698-64576717 | MS.gene35567:intron | 50.0% | |
| GCCAATATCCGTCACGAGAT+TGG | - | chr3.3:64580077-64580096 | MS.gene35567:intron | 50.0% | |
| GGATCCCACATAAAGTGGTG+AGG | - | chr3.3:64579562-64579581 | MS.gene35567:intron | 50.0% | |
| GGTAATGTGCATGCCTAAGG+GGG | + | chr3.3:64577914-64577933 | None:intergenic | 50.0% | |
| GTAATGTGCATGCCTAAGGG+GGG | + | chr3.3:64577913-64577932 | None:intergenic | 50.0% | |
| TAATGTGCATGCCTAAGGGG+GGG | + | chr3.3:64577912-64577931 | None:intergenic | 50.0% | |
| TCTCCAAACCCACCCTTCAA+TGG | - | chr3.3:64578939-64578958 | MS.gene35567:intron | 50.0% | |
| TGCAATTGGAGAGGGAGGAT+TGG | - | chr3.3:64579761-64579780 | MS.gene35567:intron | 50.0% | |
| TGCAGTCAGATCTGCACTCA+GGG | - | chr3.3:64579724-64579743 | MS.gene35567:intron | 50.0% | |
| TGGGATCTGTCAGCTCACTT+TGG | - | chr3.3:64580358-64580377 | MS.gene35567:CDS | 50.0% | |
| TGGGCCTCACCACTTTATGT+GGG | + | chr3.3:64579569-64579588 | None:intergenic | 50.0% | |
| TTGCAGTCAGATCTGCACTC+AGG | - | chr3.3:64579723-64579742 | MS.gene35567:intron | 50.0% | |
| TTGTCTGCGTCGCTCTTGAT+CGG | + | chr3.3:64576191-64576210 | None:intergenic | 50.0% | |
| ! | AGTGGACTTGTCTACCCTCT+CGG | - | chr3.3:64578971-64578990 | MS.gene35567:intron | 50.0% |
| ! | CATTCTGATGTGGTTCGGGT+TGG | + | chr3.3:64576357-64576376 | None:intergenic | 50.0% |
| ! | CCTGGTAATGTGCATGCCTA+AGG | + | chr3.3:64577917-64577936 | None:intergenic | 50.0% |
| ! | GGCTTTGTCCATTGAAGGGT+GGG | + | chr3.3:64578950-64578969 | None:intergenic | 50.0% |
| ! | TCGTGGTTAGGTTCGGTTTC+AGG | + | chr3.3:64576319-64576338 | None:intergenic | 50.0% |
| ! | TGCACTCAGGGTACCTTCTA+CGG | - | chr3.3:64579736-64579755 | MS.gene35567:intron | 50.0% |
| ! | TGTCCATTGAAGGGTGGGTT+TGG | + | chr3.3:64578945-64578964 | None:intergenic | 50.0% |
| ! | TTCCGGTTCGTGGTTAGGTT+CGG | + | chr3.3:64576326-64576345 | None:intergenic | 50.0% |
| ! | TTGAAGGGTGGGTTTGGAGA+AGG | + | chr3.3:64578939-64578958 | None:intergenic | 50.0% |
| !! | AAGGCGCTGAAGCTCGAAAA+TGG | - | chr3.3:64576410-64576429 | MS.gene35567:intron | 50.0% |
| !! | CTAAAGGGCGCTTGAATGGA+CGG | + | chr3.3:64576165-64576184 | None:intergenic | 50.0% |
| !! | GAGACTAAAGGGCGCTTGAA+TGG | + | chr3.3:64576169-64576188 | None:intergenic | 50.0% |
| !! | GGTTTCAGGTTCGGGAGTTT+GGG | + | chr3.3:64576305-64576324 | None:intergenic | 50.0% |
| !! | TGGCTTTGTCCATTGAAGGG+TGG | + | chr3.3:64578951-64578970 | None:intergenic | 50.0% |
| !! | TTCTGATGTGGTTCGGGTTG+GGG | + | chr3.3:64576355-64576374 | None:intergenic | 50.0% |
| !! | TTCTGGCTTTCCAAACCAGG+TGG | - | chr3.3:64579127-64579146 | MS.gene35567:CDS | 50.0% |
| AGGCATGCACATTACCAGGC+TGG | - | chr3.3:64577918-64577937 | MS.gene35567:intron | 55.0% | |
| AGGTTCGGGAGTTTGGGAAG+AGG | + | chr3.3:64576299-64576318 | None:intergenic | 55.0% | |
| AGTCACACACCAACACCGAG+AGG | + | chr3.3:64578989-64579008 | None:intergenic | 55.0% | |
| CATGGCAGAGTCGTGTCAAC+AGG | + | chr3.3:64579916-64579935 | None:intergenic | 55.0% | |
| CGGTTTGCAATTGGAGAGGG+AGG | - | chr3.3:64579756-64579775 | MS.gene35567:intron | 55.0% | |
| GGCATGCACATTACCAGGCT+GGG | - | chr3.3:64577919-64577938 | MS.gene35567:intron | 55.0% | |
| GTCACACACCAACACCGAGA+GGG | + | chr3.3:64578988-64579007 | None:intergenic | 55.0% | |
| GTGGGCCTCACCACTTTATG+TGG | + | chr3.3:64579570-64579589 | None:intergenic | 55.0% | |
| TACCAAAGGAGGATCGTCGC+AGG | + | chr3.3:64579186-64579205 | None:intergenic | 55.0% | |
| TGGAAGCTAAGAAGCGAGCG+TGG | + | chr3.3:64576258-64576277 | None:intergenic | 55.0% | |
| TTCGGGAGTTTGGGAAGAGG+AGG | + | chr3.3:64576296-64576315 | None:intergenic | 55.0% | |
| ! | CTTGTCTACCCTCTCGGTGT+TGG | - | chr3.3:64578977-64578996 | MS.gene35567:intron | 55.0% |
| ! | TGGAGTTCCGGTTCGTGGTT+AGG | + | chr3.3:64576331-64576350 | None:intergenic | 55.0% |
| !! | CGGTTTCAGGTTCGGGAGTT+TGG | + | chr3.3:64576306-64576325 | None:intergenic | 55.0% |
| AATGGACGGCGGAGATCGTG+CGG | + | chr3.3:64576151-64576170 | None:intergenic | 60.0% | |
| CAAAGGAGGATCGTCGCAGG+TGG | + | chr3.3:64579183-64579202 | None:intergenic | 60.0% | |
| CACCTGCGACGATCCTCCTT+TGG | - | chr3.3:64579181-64579200 | MS.gene35567:CDS | 60.0% | |
| CTAACGGCGTAATCCCAGCC+TGG | + | chr3.3:64577935-64577954 | None:intergenic | 60.0% | |
| GGACGGAAGCTTCATGCAGC+AGG | - | chr3.3:64579217-64579236 | MS.gene35567:CDS | 60.0% | |
| GGAGGAGAGAGAGAATGCGG+TGG | + | chr3.3:64576278-64576297 | None:intergenic | 60.0% | |
| ! | CGAAGGAGGGTCAAAGGCAC+CGG | + | chr3.3:64577516-64577535 | None:intergenic | 60.0% |
| !! | AAGGGCGCTTGAATGGACGG+CGG | + | chr3.3:64576162-64576181 | None:intergenic | 60.0% |
| !! | GATGTGGTTCGGGTTGGGGT+TGG | + | chr3.3:64576351-64576370 | None:intergenic | 60.0% |
| !! | TCGGGTTGGGGTTGGAGTTC+CGG | + | chr3.3:64576343-64576362 | None:intergenic | 60.0% |
| AGCAGCGGCACGAGCTCGAT+TGG | + | chr3.3:64579838-64579857 | None:intergenic | 65.0% | |
| ! | GGGGTTGGAGTTCCGGTTCG+TGG | + | chr3.3:64576336-64576355 | None:intergenic | 65.0% |
| ! | GAGCGTGGCGTTGAGCGTCG+AGG | + | chr3.3:64576243-64576262 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 64576142 | 64580540 | 64576142 | ID=MS.gene35567 |
| chr3.3 | mRNA | 64576142 | 64580540 | 64576142 | ID=MS.gene35567.t1;Parent=MS.gene35567 |
| chr3.3 | exon | 64580185 | 64580540 | 64580185 | ID=MS.gene35567.t1.exon1;Parent=MS.gene35567.t1 |
| chr3.3 | CDS | 64580185 | 64580540 | 64580185 | ID=cds.MS.gene35567.t1;Parent=MS.gene35567.t1 |
| chr3.3 | exon | 64579906 | 64580095 | 64579906 | ID=MS.gene35567.t1.exon2;Parent=MS.gene35567.t1 |
| chr3.3 | CDS | 64579906 | 64580095 | 64579906 | ID=cds.MS.gene35567.t1;Parent=MS.gene35567.t1 |
| chr3.3 | exon | 64579028 | 64579278 | 64579028 | ID=MS.gene35567.t1.exon3;Parent=MS.gene35567.t1 |
| chr3.3 | CDS | 64579028 | 64579278 | 64579028 | ID=cds.MS.gene35567.t1;Parent=MS.gene35567.t1 |
| chr3.3 | exon | 64578648 | 64578762 | 64578648 | ID=MS.gene35567.t1.exon4;Parent=MS.gene35567.t1 |
| chr3.3 | CDS | 64578648 | 64578762 | 64578648 | ID=cds.MS.gene35567.t1;Parent=MS.gene35567.t1 |
| chr3.3 | exon | 64577444 | 64577536 | 64577444 | ID=MS.gene35567.t1.exon5;Parent=MS.gene35567.t1 |
| chr3.3 | CDS | 64577444 | 64577536 | 64577444 | ID=cds.MS.gene35567.t1;Parent=MS.gene35567.t1 |
| chr3.3 | exon | 64576810 | 64576953 | 64576810 | ID=MS.gene35567.t1.exon6;Parent=MS.gene35567.t1 |
| chr3.3 | CDS | 64576810 | 64576953 | 64576810 | ID=cds.MS.gene35567.t1;Parent=MS.gene35567.t1 |
| chr3.3 | exon | 64576142 | 64576258 | 64576142 | ID=MS.gene35567.t1.exon7;Parent=MS.gene35567.t1 |
| chr3.3 | CDS | 64576142 | 64576258 | 64576142 | ID=cds.MS.gene35567.t1;Parent=MS.gene35567.t1 |
| Gene Sequence |
| Protein sequence |
