Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35771.t1 | XP_003597053.1 | 93 | 514 | 35 | 1 | 49 | 562 | 55 | 567 | 6.30E-282 | 979.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35771.t1 | B9RHP7 | 63.6 | 489 | 175 | 3 | 69 | 555 | 71 | 558 | 1.7e-182 | 640.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35771.t1 | A0RZI3 | 93.0 | 514 | 35 | 1 | 49 | 562 | 55 | 567 | 4.5e-282 | 979.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050381 | MS.gene35771 | 0.808357 | 3.22E-50 | -1.69E-46 |
MS.gene050883 | MS.gene35771 | 0.805041 | 1.62E-49 | -1.69E-46 |
MS.gene051946 | MS.gene35771 | 0.807555 | 4.77E-50 | -1.69E-46 |
MS.gene056310 | MS.gene35771 | 0.813 | 3.19E-51 | -1.69E-46 |
MS.gene056311 | MS.gene35771 | 0.82465 | 7.20E-54 | -1.69E-46 |
MS.gene057014 | MS.gene35771 | 0.802619 | 5.15E-49 | -1.69E-46 |
MS.gene058171 | MS.gene35771 | 0.806891 | 6.60E-50 | -1.69E-46 |
MS.gene058173 | MS.gene35771 | 0.8071 | 5.96E-50 | -1.69E-46 |
MS.gene058175 | MS.gene35771 | 0.807204 | 5.67E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35771.t1 | MTR_2g089120 | 92.996 | 514 | 35 | 1 | 49 | 562 | 55 | 567 | 0.0 | 1003 |
MS.gene35771.t1 | MTR_2g089130 | 84.344 | 511 | 78 | 2 | 49 | 559 | 55 | 563 | 0.0 | 915 |
MS.gene35771.t1 | MTR_4g045810 | 40.081 | 494 | 277 | 7 | 56 | 539 | 74 | 558 | 2.37e-118 | 362 |
MS.gene35771.t1 | MTR_2g065450 | 38.889 | 504 | 295 | 6 | 65 | 559 | 90 | 589 | 1.44e-109 | 340 |
MS.gene35771.t1 | MTR_4g081460 | 36.542 | 509 | 301 | 8 | 46 | 539 | 38 | 539 | 6.65e-108 | 334 |
MS.gene35771.t1 | MTR_2g064425 | 37.725 | 501 | 304 | 5 | 65 | 559 | 87 | 585 | 8.29e-107 | 332 |
MS.gene35771.t1 | MTR_4g092010 | 35.404 | 483 | 295 | 7 | 83 | 554 | 78 | 554 | 2.31e-104 | 325 |
MS.gene35771.t1 | MTR_4g092020 | 36.722 | 482 | 294 | 6 | 83 | 555 | 87 | 566 | 2.48e-101 | 318 |
MS.gene35771.t1 | MTR_2g064425 | 36.327 | 501 | 296 | 6 | 65 | 559 | 87 | 570 | 1.25e-97 | 308 |
MS.gene35771.t1 | MTR_6g008560 | 34.669 | 499 | 304 | 8 | 76 | 559 | 65 | 556 | 1.94e-97 | 307 |
MS.gene35771.t1 | MTR_8g057020 | 33.781 | 521 | 333 | 7 | 49 | 559 | 70 | 588 | 3.93e-97 | 307 |
MS.gene35771.t1 | MTR_6g039440 | 32.939 | 507 | 325 | 8 | 65 | 559 | 49 | 552 | 2.61e-96 | 304 |
MS.gene35771.t1 | MTR_3g052120 | 33.533 | 501 | 319 | 6 | 67 | 554 | 13 | 512 | 5.72e-96 | 302 |
MS.gene35771.t1 | MTR_4g048460 | 34.674 | 522 | 322 | 10 | 52 | 559 | 44 | 560 | 5.33e-95 | 301 |
MS.gene35771.t1 | MTR_2g010960 | 33.135 | 504 | 324 | 4 | 64 | 554 | 14 | 517 | 1.82e-94 | 298 |
MS.gene35771.t1 | MTR_6g064980 | 33.981 | 515 | 320 | 7 | 56 | 554 | 2 | 512 | 7.62e-94 | 296 |
MS.gene35771.t1 | MTR_5g062230 | 33.333 | 534 | 330 | 10 | 45 | 559 | 26 | 552 | 6.97e-93 | 295 |
MS.gene35771.t1 | MTR_3g464190 | 34.792 | 480 | 290 | 7 | 76 | 540 | 64 | 535 | 3.49e-91 | 291 |
MS.gene35771.t1 | MTR_3g063120 | 34.615 | 494 | 302 | 7 | 82 | 558 | 3 | 492 | 4.85e-91 | 288 |
MS.gene35771.t1 | MTR_3g063140 | 33.591 | 518 | 326 | 9 | 56 | 558 | 2 | 516 | 6.62e-91 | 289 |
MS.gene35771.t1 | MTR_7g010710 | 36.066 | 488 | 291 | 9 | 64 | 539 | 54 | 532 | 1.13e-89 | 287 |
MS.gene35771.t1 | MTR_3g465090 | 34.146 | 492 | 310 | 7 | 79 | 557 | 25 | 515 | 1.42e-89 | 285 |
MS.gene35771.t1 | MTR_3g063170 | 31.881 | 505 | 330 | 5 | 67 | 558 | 13 | 516 | 1.43e-89 | 285 |
MS.gene35771.t1 | MTR_2g082010 | 34.325 | 504 | 312 | 9 | 66 | 554 | 63 | 562 | 3.44e-89 | 286 |
MS.gene35771.t1 | MTR_5g094620 | 35.031 | 491 | 288 | 9 | 79 | 559 | 67 | 536 | 7.17e-89 | 284 |
MS.gene35771.t1 | MTR_5g073260 | 33.465 | 505 | 305 | 9 | 75 | 559 | 58 | 551 | 6.00e-88 | 282 |
MS.gene35771.t1 | MTR_2g081980 | 32.246 | 521 | 332 | 10 | 51 | 554 | 35 | 551 | 1.57e-86 | 279 |
MS.gene35771.t1 | MTR_5g073200 | 34.257 | 505 | 303 | 10 | 59 | 543 | 35 | 530 | 1.43e-85 | 276 |
MS.gene35771.t1 | MTR_8g007515 | 33.398 | 512 | 306 | 12 | 56 | 543 | 37 | 537 | 1.75e-83 | 271 |
MS.gene35771.t1 | MTR_4g048460 | 35.545 | 422 | 261 | 5 | 52 | 464 | 44 | 463 | 5.02e-81 | 262 |
MS.gene35771.t1 | MTR_6g065040 | 35.910 | 401 | 245 | 6 | 150 | 542 | 2 | 398 | 5.94e-80 | 257 |
MS.gene35771.t1 | MTR_6g008560 | 34.158 | 404 | 257 | 6 | 161 | 559 | 1 | 400 | 7.18e-79 | 254 |
MS.gene35771.t1 | MTR_2g082060 | 32.765 | 528 | 314 | 13 | 52 | 554 | 36 | 547 | 3.14e-78 | 257 |
MS.gene35771.t1 | MTR_2g064425 | 41.121 | 321 | 185 | 2 | 65 | 381 | 87 | 407 | 1.11e-72 | 239 |
MS.gene35771.t1 | MTR_4g019550 | 31.138 | 501 | 312 | 11 | 77 | 558 | 70 | 556 | 6.84e-66 | 224 |
MS.gene35771.t1 | MTR_2g082050 | 30.165 | 484 | 281 | 11 | 83 | 560 | 27 | 459 | 2.75e-64 | 217 |
MS.gene35771.t1 | MTR_2g064425 | 38.941 | 321 | 177 | 3 | 65 | 381 | 87 | 392 | 1.07e-63 | 215 |
MS.gene35771.t1 | MTR_3g063160 | 32.180 | 289 | 183 | 5 | 56 | 333 | 2 | 288 | 1.12e-39 | 146 |
MS.gene35771.t1 | MTR_2g064295 | 25.911 | 494 | 330 | 12 | 78 | 539 | 252 | 741 | 3.36e-39 | 153 |
MS.gene35771.t1 | MTR_2g012870 | 26.654 | 529 | 340 | 16 | 56 | 548 | 229 | 745 | 2.06e-37 | 148 |
MS.gene35771.t1 | MTR_3g058160 | 25.050 | 503 | 338 | 13 | 83 | 553 | 66 | 561 | 7.70e-37 | 144 |
MS.gene35771.t1 | MTR_3g058160 | 25.050 | 503 | 338 | 13 | 83 | 553 | 277 | 772 | 3.02e-36 | 144 |
MS.gene35771.t1 | MTR_3g058160 | 25.050 | 503 | 338 | 13 | 83 | 553 | 257 | 752 | 3.38e-36 | 144 |
MS.gene35771.t1 | MTR_3g058160 | 24.701 | 502 | 341 | 11 | 83 | 553 | 270 | 765 | 3.67e-36 | 144 |
MS.gene35771.t1 | MTR_2g012900 | 27.557 | 479 | 291 | 14 | 56 | 488 | 229 | 697 | 5.05e-36 | 144 |
MS.gene35771.t1 | MTR_3g058160 | 24.427 | 524 | 336 | 14 | 83 | 553 | 277 | 793 | 1.96e-33 | 136 |
MS.gene35771.t1 | MTR_7g050990 | 40.252 | 159 | 80 | 2 | 213 | 371 | 36 | 179 | 1.78e-27 | 118 |
MS.gene35771.t1 | MTR_5g094530 | 34.343 | 198 | 92 | 4 | 175 | 369 | 5 | 167 | 5.57e-27 | 108 |
MS.gene35771.t1 | MTR_5g030050 | 30.153 | 262 | 147 | 9 | 85 | 317 | 3 | 257 | 5.81e-20 | 91.3 |
MS.gene35771.t1 | MTR_7g094970 | 29.167 | 288 | 160 | 11 | 85 | 333 | 211 | 493 | 2.96e-19 | 92.0 |
MS.gene35771.t1 | MTR_7g011663 | 28.352 | 261 | 150 | 7 | 85 | 310 | 349 | 607 | 1.59e-16 | 83.6 |
MS.gene35771.t1 | MTR_7g011770 | 27.969 | 261 | 151 | 7 | 85 | 310 | 245 | 503 | 8.87e-14 | 74.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35771.t1 | AT4G16730 | 40.661 | 514 | 282 | 7 | 66 | 559 | 28 | 538 | 3.91e-132 | 396 |
MS.gene35771.t1 | AT4G16730 | 41.212 | 495 | 268 | 7 | 85 | 559 | 1 | 492 | 4.41e-131 | 392 |
MS.gene35771.t1 | AT4G16740 | 37.795 | 508 | 284 | 9 | 73 | 559 | 67 | 563 | 1.96e-109 | 338 |
MS.gene35771.t1 | AT2G24210 | 35.758 | 495 | 296 | 9 | 83 | 559 | 99 | 589 | 6.45e-105 | 328 |
MS.gene35771.t1 | AT3G25830 | 36.000 | 500 | 291 | 11 | 83 | 559 | 100 | 593 | 1.40e-103 | 324 |
MS.gene35771.t1 | AT3G25820 | 36.000 | 500 | 291 | 11 | 83 | 559 | 100 | 593 | 1.40e-103 | 324 |
MS.gene35771.t1 | AT1G61680 | 36.345 | 487 | 300 | 6 | 75 | 554 | 86 | 569 | 1.58e-103 | 323 |
MS.gene35771.t1 | AT3G25810 | 34.800 | 500 | 299 | 10 | 83 | 559 | 101 | 596 | 3.94e-100 | 315 |
MS.gene35771.t1 | AT1G61680 | 35.729 | 487 | 296 | 7 | 75 | 554 | 86 | 562 | 2.37e-99 | 312 |
MS.gene35771.t1 | AT5G23960 | 31.298 | 524 | 346 | 8 | 47 | 559 | 24 | 544 | 9.15e-86 | 276 |
MS.gene35771.t1 | AT5G23960 | 31.369 | 526 | 345 | 9 | 47 | 559 | 24 | 546 | 1.25e-84 | 273 |
MS.gene35771.t1 | AT1G70080 | 32.449 | 490 | 303 | 11 | 85 | 553 | 122 | 604 | 5.67e-78 | 258 |
MS.gene35771.t1 | AT4G16740 | 39.450 | 327 | 174 | 6 | 73 | 381 | 67 | 387 | 2.87e-71 | 234 |
MS.gene35771.t1 | AT3G25820 | 37.651 | 332 | 188 | 7 | 83 | 399 | 100 | 427 | 2.80e-70 | 233 |
MS.gene35771.t1 | AT3G14490 | 29.617 | 574 | 373 | 14 | 7 | 558 | 30 | 594 | 1.05e-68 | 233 |
MS.gene35771.t1 | AT3G29410 | 30.128 | 468 | 311 | 7 | 83 | 539 | 13 | 475 | 3.17e-65 | 221 |
MS.gene35771.t1 | AT1G33750 | 30.126 | 478 | 321 | 7 | 92 | 559 | 128 | 602 | 1.00e-64 | 222 |
MS.gene35771.t1 | AT3G29410 | 30.128 | 468 | 311 | 7 | 83 | 539 | 118 | 580 | 4.20e-64 | 221 |
MS.gene35771.t1 | AT1G31950 | 29.268 | 492 | 329 | 7 | 83 | 559 | 119 | 606 | 6.05e-62 | 215 |
MS.gene35771.t1 | AT3G14540 | 30.316 | 475 | 310 | 8 | 83 | 542 | 113 | 581 | 6.24e-62 | 214 |
MS.gene35771.t1 | AT1G31950 | 29.268 | 492 | 329 | 7 | 83 | 559 | 118 | 605 | 7.29e-62 | 214 |
MS.gene35771.t1 | AT4G15870 | 28.916 | 498 | 327 | 11 | 53 | 540 | 96 | 576 | 1.16e-59 | 208 |
MS.gene35771.t1 | AT3G14520 | 28.481 | 474 | 320 | 7 | 83 | 542 | 116 | 584 | 3.67e-58 | 204 |
MS.gene35771.t1 | AT5G44630 | 30.242 | 496 | 317 | 12 | 65 | 539 | 47 | 534 | 1.75e-57 | 202 |
MS.gene35771.t1 | AT3G32030 | 26.104 | 521 | 366 | 7 | 55 | 560 | 88 | 604 | 1.79e-55 | 197 |
MS.gene35771.t1 | AT4G13300 | 29.253 | 482 | 327 | 8 | 85 | 554 | 69 | 548 | 1.30e-54 | 194 |
MS.gene35771.t1 | AT4G16740 | 37.748 | 302 | 164 | 6 | 73 | 356 | 67 | 362 | 1.46e-54 | 189 |
MS.gene35771.t1 | AT4G16740 | 37.748 | 302 | 164 | 6 | 73 | 356 | 67 | 362 | 1.46e-54 | 189 |
MS.gene35771.t1 | AT1G31950 | 31.043 | 393 | 255 | 5 | 83 | 463 | 119 | 507 | 2.04e-52 | 187 |
MS.gene35771.t1 | AT3G29110 | 29.259 | 499 | 316 | 11 | 65 | 539 | 89 | 574 | 2.31e-52 | 188 |
MS.gene35771.t1 | AT3G25820 | 38.433 | 268 | 146 | 7 | 83 | 335 | 100 | 363 | 2.60e-52 | 184 |
MS.gene35771.t1 | AT3G25820 | 38.433 | 268 | 146 | 7 | 83 | 335 | 100 | 363 | 2.60e-52 | 184 |
MS.gene35771.t1 | AT4G20230 | 27.983 | 461 | 320 | 7 | 85 | 535 | 119 | 577 | 2.93e-52 | 188 |
MS.gene35771.t1 | AT2G23230 | 30.000 | 520 | 319 | 14 | 65 | 554 | 90 | 594 | 3.51e-52 | 188 |
MS.gene35771.t1 | AT4G20230 | 27.983 | 461 | 320 | 7 | 85 | 535 | 131 | 589 | 3.62e-52 | 188 |
MS.gene35771.t1 | AT4G13280 | 28.924 | 446 | 308 | 6 | 116 | 554 | 105 | 548 | 4.03e-52 | 187 |
MS.gene35771.t1 | AT2G23230 | 30.097 | 515 | 320 | 14 | 65 | 554 | 90 | 589 | 1.08e-51 | 187 |
MS.gene35771.t1 | AT3G29190 | 29.710 | 414 | 281 | 6 | 85 | 489 | 116 | 528 | 1.80e-51 | 186 |
MS.gene35771.t1 | AT3G14540 | 30.886 | 395 | 253 | 7 | 83 | 463 | 113 | 501 | 1.89e-51 | 184 |
MS.gene35771.t1 | AT5G48110 | 29.375 | 320 | 221 | 4 | 221 | 539 | 2 | 317 | 2.47e-50 | 177 |
MS.gene35771.t1 | AT4G20210 | 27.699 | 491 | 331 | 10 | 85 | 558 | 115 | 598 | 5.00e-50 | 182 |
MS.gene35771.t1 | AT1G66020 | 29.247 | 465 | 309 | 9 | 85 | 535 | 113 | 571 | 1.19e-49 | 181 |
MS.gene35771.t1 | AT1G48800 | 29.645 | 479 | 311 | 13 | 83 | 545 | 118 | 586 | 2.32e-49 | 180 |
MS.gene35771.t1 | AT4G20200 | 28.664 | 464 | 313 | 6 | 85 | 535 | 119 | 577 | 2.57e-49 | 180 |
MS.gene35771.t1 | AT1G48820 | 27.273 | 484 | 306 | 12 | 65 | 540 | 97 | 542 | 2.04e-43 | 163 |
MS.gene35771.t1 | AT1G66020 | 36.071 | 280 | 162 | 6 | 85 | 351 | 113 | 388 | 6.49e-43 | 159 |
MS.gene35771.t1 | AT4G13280 | 27.578 | 446 | 284 | 8 | 116 | 554 | 105 | 518 | 1.14e-42 | 160 |
MS.gene35771.t1 | AT1G79460 | 25.536 | 513 | 339 | 13 | 78 | 555 | 270 | 774 | 7.32e-34 | 137 |
MS.gene35771.t1 | AT1G61120 | 26.714 | 423 | 272 | 7 | 77 | 471 | 280 | 692 | 3.51e-32 | 132 |
MS.gene35771.t1 | AT4G02780 | 30.916 | 262 | 142 | 10 | 85 | 310 | 334 | 592 | 3.58e-18 | 89.0 |
Find 127 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCAAATATGTCTTAAAATT+TGG | 0.090930 | 2.1:+12892419 | None:intergenic |
TTATATGAGGCATCATATTT+AGG | 0.175329 | 2.1:-12893837 | MS.gene35771:CDS |
ATTCCAAAAGAGTTGGTATT+TGG | 0.197928 | 2.1:+12893628 | None:intergenic |
CCGGGGAAATTCTTCGACTA+TGG | 0.229539 | 2.1:-12892271 | MS.gene35771:CDS |
TTTAAGACATATTTGGATAA+TGG | 0.251513 | 2.1:-12892413 | MS.gene35771:CDS |
TAACCAAATACCAACTCTTT+TGG | 0.266679 | 2.1:-12893631 | MS.gene35771:CDS |
TAGCATATCTTCATGTATTC+TGG | 0.278972 | 2.1:+12892684 | None:intergenic |
TATATGAGGCATCATATTTA+GGG | 0.283045 | 2.1:-12893836 | MS.gene35771:CDS |
ATATTTCTGCCAATTCTCTT+TGG | 0.285413 | 2.1:+12893568 | None:intergenic |
ATCACTTACCAATGACATTT+GGG | 0.292181 | 2.1:-12893871 | MS.gene35771:CDS |
GATGATATCTTTGACACTTA+TGG | 0.293561 | 2.1:-12892876 | MS.gene35771:CDS |
TGAAGATAAGACCAAAAGTT+TGG | 0.295837 | 2.1:-12895449 | MS.gene35771:CDS |
CCAATTTGCCTGCCTACTTC+AGG | 0.296197 | 2.1:+12893735 | None:intergenic |
GACTTGACCACCCAAACTTT+TGG | 0.297929 | 2.1:+12895438 | None:intergenic |
CATTTCTTGAAGAAGCTAAA+TGG | 0.310663 | 2.1:-12892460 | MS.gene35771:CDS |
CTTCTAACCTTGCCATTCTT+AGG | 0.311069 | 2.1:+12893688 | None:intergenic |
GAGAGAGCATGATGGATTAA+TGG | 0.329404 | 2.1:-12900464 | MS.gene35771:CDS |
CAATTTGAATGACATGGTTC+TGG | 0.331181 | 2.1:+12892942 | None:intergenic |
TTGCCACATCCCTTCAATTT+CGG | 0.335451 | 2.1:-12895255 | MS.gene35771:CDS |
CTTGCCATTCTTAGGTGCTT+TGG | 0.346897 | 2.1:+12893696 | None:intergenic |
AATCACTTACCAATGACATT+TGG | 0.351614 | 2.1:-12893872 | MS.gene35771:CDS |
CCTGAAGTAGGCAGGCAAAT+TGG | 0.353627 | 2.1:-12893735 | MS.gene35771:CDS |
ATGAAGGAAGAATACAAATA+AGG | 0.356949 | 2.1:-12891522 | MS.gene35771:CDS |
TCATGAGCACGTACATGAAT+TGG | 0.363518 | 2.1:-12900500 | MS.gene35771:CDS |
CCCAGGCTCTTCACTTGCTC+CGG | 0.372004 | 2.1:-12892290 | MS.gene35771:CDS |
GCTGGGGATTGGTCACCATT+TGG | 0.377069 | 2.1:-12895338 | MS.gene35771:CDS |
TCTATATGCAATTTCATTTG+TGG | 0.378965 | 2.1:+12892644 | None:intergenic |
GACCAACGGAGTGCTTCTTA+TGG | 0.384882 | 2.1:-12892980 | MS.gene35771:CDS |
ATTAGGTGGTGGAAAGAGTT+GGG | 0.386750 | 2.1:-12893035 | MS.gene35771:intron |
GAAGCTAAATGGTTCAATAA+TGG | 0.388219 | 2.1:-12892449 | MS.gene35771:CDS |
ATACATGAAGATATGCTATA+TGG | 0.396146 | 2.1:-12892679 | MS.gene35771:CDS |
GTCATTACACCAAAGAGAAT+TGG | 0.404125 | 2.1:-12893577 | MS.gene35771:CDS |
TTGAATTTAGCAATGCTTCT+CGG | 0.408026 | 2.1:+12895404 | None:intergenic |
TTTCGGTTACTGAGGCATAA+TGG | 0.414627 | 2.1:-12895238 | MS.gene35771:CDS |
AACTTGGGAGGATATGTGAT+TGG | 0.414855 | 2.1:-12895297 | MS.gene35771:CDS |
ATACAAATAAGGATGCTACT+AGG | 0.418565 | 2.1:-12891511 | MS.gene35771:CDS |
CCATTCTTAGGTGCTTTGGA+AGG | 0.418608 | 2.1:+12893700 | None:intergenic |
GGGTATGTTGAGTTTATATG+AGG | 0.434234 | 2.1:-12893850 | MS.gene35771:CDS |
ATCATCTTCAATGTTACAAT+AGG | 0.441194 | 2.1:+12895376 | None:intergenic |
GAAGATAAGACCAAAAGTTT+GGG | 0.444184 | 2.1:-12895448 | MS.gene35771:CDS |
GGATGCTACTAGGGAATTTG+TGG | 0.444878 | 2.1:-12891501 | MS.gene35771:CDS |
ATTCTCTTTGGTGTAATGAC+TGG | 0.447027 | 2.1:+12893580 | None:intergenic |
ATGCATGCCACCTTCCTCAT+TGG | 0.449603 | 2.1:-12892359 | MS.gene35771:CDS |
TCAATCCAAGGGCTGGGGAT+TGG | 0.453647 | 2.1:-12895349 | MS.gene35771:CDS |
TAGGTGCTTTGGAAGGGTTA+AGG | 0.456059 | 2.1:+12893707 | None:intergenic |
GCCTGCCTACTTCAGGACTA+AGG | 0.459721 | 2.1:+12893742 | None:intergenic |
CAACATACCCCAAATGTCAT+TGG | 0.463701 | 2.1:+12893863 | None:intergenic |
CGTGGGTCACACTCTCCAAC+TGG | 0.464408 | 2.1:+12900431 | None:intergenic |
CATAACTAGCAAAATACATA+TGG | 0.467636 | 2.1:+12892899 | None:intergenic |
CCAGGCTCTTCACTTGCTCC+GGG | 0.468250 | 2.1:-12892289 | MS.gene35771:CDS |
GATAATGGAGTGATTTCTGC+AGG | 0.473286 | 2.1:-12892398 | MS.gene35771:CDS |
ATTGACTCAATCCAAGGGCT+GGG | 0.473312 | 2.1:-12895355 | MS.gene35771:CDS |
TTGGGACTTGTTGACAAACT+TGG | 0.473750 | 2.1:-12893017 | MS.gene35771:CDS |
GATTGACTCAATCCAAGGGC+TGG | 0.474173 | 2.1:-12895356 | MS.gene35771:CDS |
GTCTTATCTTCAGTTTGTAA+AGG | 0.481471 | 2.1:+12895460 | None:intergenic |
GATTAGGTGGTGGAAAGAGT+TGG | 0.483866 | 2.1:-12893036 | MS.gene35771:intron |
ATTTGTGTCCGACCTTGGAT+TGG | 0.484513 | 2.1:+12900406 | None:intergenic |
TACAAATAAGGATGCTACTA+GGG | 0.488175 | 2.1:-12891510 | MS.gene35771:CDS |
CTTCGACTATGGGATGACTT+AGG | 0.488396 | 2.1:-12892260 | MS.gene35771:CDS |
CGGGGAAATTCTTCGACTAT+GGG | 0.489879 | 2.1:-12892270 | MS.gene35771:CDS |
GATGGATTAATGGTGGTAGA+TGG | 0.491155 | 2.1:-12900454 | MS.gene35771:CDS |
AATGGCTGGCCCACATGTCC+TGG | 0.494407 | 2.1:-12895220 | MS.gene35771:intron |
CATTGATCTCATCTTCCAAA+TGG | 0.495809 | 2.1:+12895323 | None:intergenic |
ACTTGGGAGGATATGTGATT+GGG | 0.499523 | 2.1:-12895296 | MS.gene35771:CDS |
GGTGACCAATCCCCAGCCCT+TGG | 0.500245 | 2.1:+12895344 | None:intergenic |
GCCACCTTCCTCATTGGTGA+TGG | 0.504456 | 2.1:-12892353 | MS.gene35771:CDS |
CATTCTTAGGTGCTTTGGAA+GGG | 0.508082 | 2.1:+12893701 | None:intergenic |
TTTGCCAATTCCAAAAGAGT+TGG | 0.511202 | 2.1:+12893621 | None:intergenic |
GCCTCAGTAACCGAAATTGA+AGG | 0.515765 | 2.1:+12895245 | None:intergenic |
AATATTTCAGATGAAAATGA+AGG | 0.518222 | 2.1:-12891538 | MS.gene35771:CDS |
GATTTCTGCAGGATCATGTA+TGG | 0.522815 | 2.1:-12892387 | MS.gene35771:CDS |
GAGTGCTTCTTATGGACAGT+AGG | 0.523662 | 2.1:-12892972 | MS.gene35771:CDS |
CCTTCCAAAGCACCTAAGAA+TGG | 0.525082 | 2.1:-12893700 | MS.gene35771:CDS |
GGGATATGACTTCATCATCA+TGG | 0.527240 | 2.1:+12892310 | None:intergenic |
ACCTTAGTCCTGAAGTAGGC+AGG | 0.530056 | 2.1:-12893743 | MS.gene35771:CDS |
GGTTACTGAGGCATAATGGC+TGG | 0.530808 | 2.1:-12895234 | MS.gene35771:CDS |
GAGAATTGGCAGAAATATGC+AGG | 0.535303 | 2.1:-12893563 | MS.gene35771:intron |
CAGATGGGACCTTGATGCAA+TGG | 0.538910 | 2.1:-12892715 | MS.gene35771:CDS |
CCCTTCAATTTCGGTTACTG+AGG | 0.554070 | 2.1:-12895246 | MS.gene35771:CDS |
ACGAGCCCTTGAAAATTCCA+TGG | 0.555738 | 2.1:+12893785 | None:intergenic |
GTTCAGGAGGAACAAGAAAG+AGG | 0.555777 | 2.1:-12891601 | MS.gene35771:intron |
CCCGGAGCAAGTGAAGAGCC+TGG | 0.558035 | 2.1:+12892289 | None:intergenic |
TAACCGAAATTGAAGGGATG+TGG | 0.558085 | 2.1:+12895252 | None:intergenic |
AGGTAATGATGTGAAGATCA+AGG | 0.564747 | 2.1:+12891336 | None:intergenic |
AGAGCATGATGGATTAATGG+TGG | 0.566276 | 2.1:-12900461 | MS.gene35771:CDS |
GTGACCCACGTGCCAATCCA+AGG | 0.566679 | 2.1:-12900418 | MS.gene35771:intron |
GATGAGATCAATGTTCAACT+TGG | 0.572324 | 2.1:-12895313 | MS.gene35771:CDS |
ATGCGGCAATTTGAATGACA+TGG | 0.572463 | 2.1:+12892936 | None:intergenic |
TCCGACCTTGGATTGGCACG+TGG | 0.573819 | 2.1:+12900413 | None:intergenic |
GAGACAGAGAGAGAGCATGA+TGG | 0.577452 | 2.1:-12900472 | MS.gene35771:CDS |
AAGATGATTGACTCAATCCA+AGG | 0.578634 | 2.1:-12895361 | MS.gene35771:CDS |
CCACACCTTAGTCCTGAAGT+AGG | 0.581171 | 2.1:-12893747 | MS.gene35771:CDS |
CCTCAGTAACCGAAATTGAA+GGG | 0.583119 | 2.1:+12895246 | None:intergenic |
CCGGAGCAAGTGAAGAGCCT+GGG | 0.583946 | 2.1:+12892290 | None:intergenic |
GAAGTTGCTCCATTGCATCA+AGG | 0.585000 | 2.1:+12892706 | None:intergenic |
TGATGATGAAGTCATATCCC+AGG | 0.589646 | 2.1:-12892307 | MS.gene35771:CDS |
CTACTTCAGGACTAAGGTGT+GGG | 0.590174 | 2.1:+12893748 | None:intergenic |
ATGCAAGATACCAGGACATG+TGG | 0.593231 | 2.1:+12895210 | None:intergenic |
CATTGGTGATGGTCTCTCAA+AGG | 0.594573 | 2.1:-12892342 | MS.gene35771:CDS |
ATGAGATCAATGTTCAACTT+GGG | 0.595916 | 2.1:-12895312 | MS.gene35771:CDS |
TATCAAAGCTTCTCTTAACA+TGG | 0.598838 | 2.1:-12891431 | MS.gene35771:CDS |
GATAAGACCAAAAGTTTGGG+TGG | 0.599028 | 2.1:-12895445 | MS.gene35771:CDS |
CCATAGTCGAAGAATTTCCC+CGG | 0.608178 | 2.1:+12892271 | None:intergenic |
GTCCATAAGAAGCACTCCGT+TGG | 0.609668 | 2.1:+12892978 | None:intergenic |
TTGACTCAATCCAAGGGCTG+GGG | 0.610758 | 2.1:-12895354 | MS.gene35771:CDS |
AGTGCTTCTTATGGACAGTA+GGG | 0.615566 | 2.1:-12892971 | MS.gene35771:CDS |
GCACGTACATGAATTGGATG+TGG | 0.615824 | 2.1:-12900494 | MS.gene35771:CDS |
CCGACCTTGGATTGGCACGT+GGG | 0.616192 | 2.1:+12900414 | None:intergenic |
AGATCAATGTTCAACTTGGG+AGG | 0.619212 | 2.1:-12895309 | MS.gene35771:CDS |
GTGGCAAAGAGGTCTTGAGA+AGG | 0.619717 | 2.1:+12895271 | None:intergenic |
GCTCAAGTTATTTATCAACA+TGG | 0.621098 | 2.1:-12891400 | MS.gene35771:CDS |
TGCAAGATACCAGGACATGT+GGG | 0.621181 | 2.1:+12895211 | None:intergenic |
GAGACCATCACCAATGAGGA+AGG | 0.621909 | 2.1:+12892349 | None:intergenic |
CCTACTTCAGGACTAAGGTG+TGG | 0.623254 | 2.1:+12893747 | None:intergenic |
CAAAGCACCTAAGAATGGCA+AGG | 0.625330 | 2.1:-12893695 | MS.gene35771:CDS |
TGGCAAAGAGGTCTTGAGAA+GGG | 0.625651 | 2.1:+12895272 | None:intergenic |
TATAGAATTCAGAAAGAACA+TGG | 0.628836 | 2.1:-12892627 | MS.gene35771:CDS |
GGATGACTTAGGAACTTCAA+CGG | 0.635407 | 2.1:-12892249 | MS.gene35771:intron |
AATGGTGGTAGATGGCCAGT+TGG | 0.652213 | 2.1:-12900446 | MS.gene35771:CDS |
TTGAGAGACCATCACCAATG+AGG | 0.655213 | 2.1:+12892345 | None:intergenic |
AGATGATTGACTCAATCCAA+GGG | 0.655644 | 2.1:-12895360 | MS.gene35771:CDS |
ATTGAAGGGATGTGGCAAAG+AGG | 0.660331 | 2.1:+12895260 | None:intergenic |
TCACTTACCAATGACATTTG+GGG | 0.667503 | 2.1:-12893870 | MS.gene35771:CDS |
ACCATCACCAATGAGGAAGG+TGG | 0.672270 | 2.1:+12892352 | None:intergenic |
CAGGCTCTTCACTTGCTCCG+GGG | 0.678340 | 2.1:-12892288 | MS.gene35771:CDS |
AATTTGTGGAGAGAACTCAA+TGG | 0.695889 | 2.1:-12891487 | MS.gene35771:CDS |
GAAGCTTTGATAACAGACGA+AGG | 0.721487 | 2.1:+12891442 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 12891324 | 12900533 | 12891324 | ID=MS.gene35771 |
chr2.1 | mRNA | 12891324 | 12900533 | 12891324 | ID=MS.gene35771.t1;Parent=MS.gene35771 |
chr2.1 | exon | 12900419 | 12900533 | 12900419 | ID=MS.gene35771.t1.exon1;Parent=MS.gene35771.t1 |
chr2.1 | CDS | 12900419 | 12900533 | 12900419 | ID=cds.MS.gene35771.t1;Parent=MS.gene35771.t1 |
chr2.1 | exon | 12895698 | 12895726 | 12895698 | ID=MS.gene35771.t1.exon2;Parent=MS.gene35771.t1 |
chr2.1 | CDS | 12895698 | 12895726 | 12895698 | ID=cds.MS.gene35771.t1;Parent=MS.gene35771.t1 |
chr2.1 | exon | 12895221 | 12895488 | 12895221 | ID=MS.gene35771.t1.exon3;Parent=MS.gene35771.t1 |
chr2.1 | CDS | 12895221 | 12895488 | 12895221 | ID=cds.MS.gene35771.t1;Parent=MS.gene35771.t1 |
chr2.1 | exon | 12893564 | 12893936 | 12893564 | ID=MS.gene35771.t1.exon4;Parent=MS.gene35771.t1 |
chr2.1 | CDS | 12893564 | 12893936 | 12893564 | ID=cds.MS.gene35771.t1;Parent=MS.gene35771.t1 |
chr2.1 | exon | 12892834 | 12893052 | 12892834 | ID=MS.gene35771.t1.exon5;Parent=MS.gene35771.t1 |
chr2.1 | CDS | 12892834 | 12893052 | 12892834 | ID=cds.MS.gene35771.t1;Parent=MS.gene35771.t1 |
chr2.1 | exon | 12892596 | 12892734 | 12892596 | ID=MS.gene35771.t1.exon6;Parent=MS.gene35771.t1 |
chr2.1 | CDS | 12892596 | 12892734 | 12892596 | ID=cds.MS.gene35771.t1;Parent=MS.gene35771.t1 |
chr2.1 | exon | 12892250 | 12892501 | 12892250 | ID=MS.gene35771.t1.exon7;Parent=MS.gene35771.t1 |
chr2.1 | CDS | 12892250 | 12892501 | 12892250 | ID=cds.MS.gene35771.t1;Parent=MS.gene35771.t1 |
chr2.1 | exon | 12891324 | 12891617 | 12891324 | ID=MS.gene35771.t1.exon8;Parent=MS.gene35771.t1 |
chr2.1 | CDS | 12891324 | 12891617 | 12891324 | ID=cds.MS.gene35771.t1;Parent=MS.gene35771.t1 |
Gene Sequence |
Protein sequence |