AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36180


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36180.t1 MTR_7g044770 98.276 754 10 1 3 756 1 751 0.0 1536
MS.gene36180.t1 MTR_2g020660 81.635 746 116 3 12 756 2 727 0.0 1249
MS.gene36180.t1 MTR_7g044770 98.780 574 7 0 183 756 1 574 0.0 1176
MS.gene36180.t1 MTR_4g101750 42.740 730 399 9 21 745 55 770 0.0 563
MS.gene36180.t1 MTR_4g101750 43.536 673 362 8 21 689 55 713 1.75e-179 531
MS.gene36180.t1 MTR_2g029125 56.250 432 146 8 62 460 64 485 6.05e-146 436
MS.gene36180.t1 MTR_2g029125 55.479 438 146 8 62 460 64 491 1.02e-144 433
MS.gene36180.t1 MTR_2g029125 55.663 415 141 8 62 443 64 468 2.88e-136 411
MS.gene36180.t1 MTR_2g029125 54.695 426 142 8 62 446 64 479 1.79e-135 410
MS.gene36180.t1 MTR_2g028350 47.601 521 169 9 29 479 7 493 2.59e-135 410
MS.gene36180.t1 MTR_2g029125 54.869 421 141 8 62 443 64 474 4.48e-135 408
MS.gene36180.t1 MTR_2g029125 54.610 423 141 8 62 443 64 476 8.37e-135 407
MS.gene36180.t1 MTR_2g029125 51.509 464 165 10 62 484 64 508 9.81e-135 410
MS.gene36180.t1 MTR_2g028380 49.266 477 159 6 62 464 3 470 1.23e-134 407
MS.gene36180.t1 MTR_2g028440 44.724 597 190 14 3 479 1 577 5.28e-133 406
MS.gene36180.t1 MTR_2g029120 52.203 454 173 13 62 507 27 444 6.33e-125 381
MS.gene36180.t1 MTR_2g067200 61.012 336 108 8 137 464 157 477 6.88e-125 383
MS.gene36180.t1 MTR_2g029120 52.847 439 166 11 62 493 27 431 1.95e-124 380
MS.gene36180.t1 MTR_2g028400 46.097 538 182 11 3 474 1 496 2.96e-124 381
MS.gene36180.t1 MTR_2g029120 50.108 465 165 12 62 493 27 457 4.54e-121 372
MS.gene36180.t1 MTR_2g028340 50.249 402 142 7 1 358 5 392 5.63e-115 353
MS.gene36180.t1 MTR_3g014380 40.784 510 243 10 6 487 5 483 1.14e-111 348
MS.gene36180.t1 MTR_2g029120 54.348 368 146 9 62 422 27 379 3.33e-108 335
MS.gene36180.t1 MTR_6g023380 50.153 327 132 6 183 485 1 320 2.43e-97 305
MS.gene36180.t1 MTR_2g066890 65.217 230 71 4 136 357 3 231 1.25e-96 301
MS.gene36180.t1 MTR_8g105060 39.709 481 235 9 3 461 1 448 2.87e-96 306
MS.gene36180.t1 MTR_2g028360 49.730 370 127 6 137 457 214 573 5.40e-95 308
MS.gene36180.t1 MTR_2g028360 63.158 228 76 1 137 364 1 220 2.50e-90 296
MS.gene36180.t1 MTR_8g104250 48.036 331 140 5 163 466 87 412 3.03e-88 284
MS.gene36180.t1 MTR_4g051702 37.769 511 239 13 6 485 5 467 3.64e-87 283
MS.gene36180.t1 MTR_2g028300 50.400 250 69 5 29 274 8 206 1.07e-68 225
MS.gene36180.t1 MTR_2g067190 61.622 185 63 3 124 301 104 287 5.52e-67 223
MS.gene36180.t1 MTR_8g105090 36.517 356 165 11 6 335 5 325 4.17e-56 195
MS.gene36180.t1 MTR_8g105040 47.085 223 73 3 263 485 1 178 1.04e-51 178
MS.gene36180.t1 MTR_5g083100 39.655 290 90 6 210 498 242 447 2.65e-47 174
MS.gene36180.t1 MTR_2g021910 55.782 147 41 1 212 358 414 536 1.52e-38 153
MS.gene36180.t1 MTR_2g021910 64.655 116 41 0 210 325 47 162 1.24e-35 144
MS.gene36180.t1 MTR_4g101740 31.461 267 143 4 432 697 3 230 3.00e-35 134
MS.gene36180.t1 MTR_8g105070 69.231 78 24 0 383 460 8 85 1.71e-30 117
MS.gene36180.t1 MTR_2g066880 50.746 134 41 4 377 498 2 122 1.50e-25 103
MS.gene36180.t1 MTR_1g052535 39.894 188 102 3 27 209 38 219 9.60e-25 108
MS.gene36180.t1 MTR_2g029210 50.000 118 51 2 383 492 51 168 1.22e-24 102
MS.gene36180.t1 MTR_1g052535 39.894 188 102 3 27 209 38 219 3.40e-24 108
MS.gene36180.t1 MTR_7g009740 33.333 195 96 4 45 213 36 222 1.18e-22 103
MS.gene36180.t1 MTR_4g079360 41.353 133 69 2 67 199 57 180 6.01e-22 101
MS.gene36180.t1 MTR_3g097250 39.865 148 79 3 67 210 83 224 6.89e-22 101
MS.gene36180.t1 MTR_8g104240 62.857 70 19 1 428 497 33 95 5.85e-21 89.7
MS.gene36180.t1 MTR_2g101810 39.200 125 63 3 352 463 2 126 1.22e-19 87.0
MS.gene36180.t1 MTR_4g119340 39.706 136 75 3 67 200 14 144 2.56e-19 93.6
MS.gene36180.t1 MTR_5g078620 67.857 56 15 1 303 358 9 61 4.05e-18 79.7
MS.gene36180.t1 MTR_1g048000 39.333 150 68 4 67 199 19 162 3.47e-17 86.7
MS.gene36180.t1 MTR_2g069310 39.333 150 68 4 67 199 19 162 3.59e-17 86.7
MS.gene36180.t1 MTR_2g069050 39.333 150 68 4 67 199 19 162 3.85e-17 86.7
MS.gene36180.t1 MTR_2g069320 40.000 150 67 5 67 199 19 162 4.89e-17 86.3
MS.gene36180.t1 MTR_4g116430 28.218 202 127 4 68 257 140 335 3.71e-12 70.5
MS.gene36180.t1 MTR_6g004760 43.836 73 15 1 421 493 23 69 3.20e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36180.t1 AT2G45030 80.820 756 141 3 3 756 1 754 0.0 1286
MS.gene36180.t1 AT1G45332 80.820 756 141 3 3 756 1 754 0.0 1285
MS.gene36180.t1 AT1G45332 82.753 574 99 0 183 756 1 574 0.0 1012
MS.gene36180.t1 AT1G62750 44.363 683 370 8 68 745 97 774 0.0 563
MS.gene36180.t1 AT1G06220 22.705 806 461 29 66 734 137 917 4.16e-28 122
MS.gene36180.t1 AT1G06220 22.705 806 461 29 66 734 137 917 4.16e-28 122
MS.gene36180.t1 AT1G06220 22.705 806 461 29 66 734 137 917 4.16e-28 122
MS.gene36180.t1 AT5G25230 21.988 805 468 28 66 734 123 903 6.13e-25 111
MS.gene36180.t1 AT5G25230 21.988 805 468 28 66 734 123 903 6.13e-25 111
MS.gene36180.t1 AT5G08650 38.415 164 91 2 51 210 70 227 9.29e-24 107
MS.gene36180.t1 AT5G08650 26.496 234 137 8 320 540 243 454 1.71e-12 71.2
MS.gene36180.t1 AT5G39900 36.813 182 97 3 41 213 43 215 1.15e-23 107
MS.gene36180.t1 AT5G08650 38.415 164 91 2 51 210 70 227 1.29e-23 107
MS.gene36180.t1 AT5G08650 26.496 234 137 8 320 540 243 454 1.95e-12 71.2
MS.gene36180.t1 AT5G13650 38.235 170 96 2 42 209 58 220 1.24e-22 103
MS.gene36180.t1 AT5G13650 42.759 145 74 2 67 209 82 219 2.18e-22 103
MS.gene36180.t1 AT2G31060 42.105 133 68 2 67 199 59 182 8.51e-22 101
MS.gene36180.t1 AT2G31060 40.876 137 68 3 67 199 59 186 5.73e-20 95.5
MS.gene36180.t1 AT3G22980 38.806 134 79 1 67 200 9 139 1.02e-19 95.1
MS.gene36180.t1 AT3G22980 38.806 134 79 1 67 200 9 139 1.02e-19 95.1
MS.gene36180.t1 AT3G22980 38.806 134 79 1 67 200 9 139 1.02e-19 95.1
MS.gene36180.t1 AT1G56070 38.000 150 70 4 67 199 19 162 9.05e-17 85.5
MS.gene36180.t1 AT1G56070 38.000 150 70 4 67 199 19 162 9.05e-17 85.5
MS.gene36180.t1 AT1G56070 38.000 150 70 4 67 199 19 162 9.05e-17 85.5
MS.gene36180.t1 AT3G12915 37.333 150 71 4 67 199 19 162 2.85e-16 83.6

Find 221 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACACAGCGGTTCCTTAAT+TGG 0.154358 7.1:+55240912 MS.gene36180:intron
CTGCTGCTACTTGTTGTAAT+TGG 0.184042 7.1:+55228950 MS.gene36180:CDS
GAAAGTACCAAATGAATTTC+AGG 0.216081 7.1:+55241218 MS.gene36180:CDS
GGAGTGTAGACAATTATTTC+TGG 0.220712 7.1:+55239111 MS.gene36180:intron
TGTTGATCTTGTGAAGTTAA+AGG 0.221002 7.1:+55232477 MS.gene36180:CDS
ATCTGAAGGCACTTCTTTAA+TGG 0.223602 7.1:-55232623 None:intergenic
GAGGCGCTGGGCGGAGGATT+TGG 0.231714 7.1:-55228596 None:intergenic
ATAGATAGAAGCCATCTTAA+AGG 0.259983 7.1:-55241006 None:intergenic
TTCAACGGGATGTCCAATTA+AGG 0.260719 7.1:-55240925 None:intergenic
GCATAATTATTAACTTCAAT+TGG 0.279043 7.1:-55234883 None:intergenic
GTCCCTCTTAACAATATGTT+TGG 0.291838 7.1:+55242659 MS.gene36180:CDS
CCTTGTATGCGTTTACCAAT+TGG 0.295693 7.1:-55242867 None:intergenic
AAACCTTCTTCCAAACCTAT+TGG 0.302351 7.1:-55232445 None:intergenic
GGCCAAATAGTTGCTGTATT+TGG 0.307130 7.1:+55237322 MS.gene36180:CDS
CACCAAATACAGCAACTATT+TGG 0.307213 7.1:-55237324 None:intergenic
CCTTCTCCTCCTTCTTAGAT+TGG 0.311191 7.1:-55234912 None:intergenic
TTGGTCAGCTAACATATTTA+AGG 0.321390 7.1:+55235793 MS.gene36180:CDS
CTCCGTCAACGTCGTCTTAC+CGG 0.325678 7.1:-55228809 None:intergenic
TTGTAATTGGAAAGATTATA+CGG 0.326447 7.1:+55228963 MS.gene36180:CDS
TGAATTTACAATGGAATATA+AGG 0.327758 7.1:+55242813 MS.gene36180:CDS
ATTGGGACCATCAAAATAAT+AGG 0.329539 7.1:-55232500 None:intergenic
TGGTGCGAAGATGGATTCTA+TGG 0.332523 7.1:+55228894 MS.gene36180:CDS
CTCAAGGTCAACATCTGAAA+TGG 0.333499 7.1:-55232740 None:intergenic
CAGCCAGTCTCAAAAGATTC+TGG 0.334700 7.1:+55238830 MS.gene36180:CDS
TTCAGCTCAACAAGCATAAC+AGG 0.336902 7.1:-55241198 None:intergenic
GAAGATGGATTCTATGGATT+TGG 0.338482 7.1:+55228900 MS.gene36180:CDS
GCCAATGCAGGTTCCTCGCT+TGG 0.348318 7.1:+55237014 MS.gene36180:intron
TGGTTGTGGTGGTGGAGGTA+AGG 0.350035 7.1:-55228627 None:intergenic
GGAAAGTAGGATCCTCTCTT+TGG 0.351045 7.1:-55238983 None:intergenic
TCCGGAGGGCAAGGACAATA+TGG 0.354354 7.1:+55239791 MS.gene36180:CDS
CTTGTATGCGTTTACCAATT+GGG 0.364931 7.1:-55242866 None:intergenic
AAAATTTATACCGGTATTCA+TGG 0.365683 7.1:+55234128 MS.gene36180:CDS
TAAAGAAGTGCCTTCAGATA+TGG 0.368518 7.1:+55232627 MS.gene36180:CDS
GGACAATATGGACGGGTCAT+TGG 0.372717 7.1:+55239803 MS.gene36180:CDS
TTTGGTGTTGATTGTGCATC+AGG 0.375369 7.1:+55237340 MS.gene36180:CDS
AGTACAACCTGCCCACTCTC+TGG 0.376146 7.1:-55239020 None:intergenic
GACAATATGGACGGGTCATT+GGG 0.376252 7.1:+55239804 MS.gene36180:CDS
GTGGCGGAGGTGGGAGGTGG+CGG 0.376796 7.1:-55228674 None:intergenic
TGGAGCACCGGTGGTGGTTG+TGG 0.379795 7.1:-55228641 None:intergenic
TCTATGTTGAACGCATTAGA+AGG 0.380450 7.1:+55239157 MS.gene36180:CDS
CATGAGATTCATGAGGTTAG+AGG 0.383584 7.1:+55228859 MS.gene36180:CDS
GGTGGGAGGTGGCGGCGAGG+AGG 0.384447 7.1:-55228666 None:intergenic
ACAGGGGATACAACCACTTC+TGG 0.385198 7.1:+55234834 MS.gene36180:intron
CTTCCACCATGGTTCTTTGT+CGG 0.385301 7.1:-55228737 None:intergenic
TCCTACTTTCCGTGTTGGCT+TGG 0.395512 7.1:+55238995 MS.gene36180:CDS
ACCGGTGGTGGTTGTGGTGG+TGG 0.396611 7.1:-55228635 None:intergenic
CCAATGCAGGTTCCTCGCTT+GGG 0.398016 7.1:+55237015 MS.gene36180:intron
CTTGTCTAGGTTGAGCTGCC+TGG 0.399587 7.1:+55235717 MS.gene36180:intron
CCATGGTTCTTTGTCGGTTG+TGG 0.402211 7.1:-55228731 None:intergenic
AGATGGAGTTGGTGCGAAGA+TGG 0.407426 7.1:+55228885 MS.gene36180:CDS
GTGGGAGGTGGCGGCGAGGA+GGG 0.410296 7.1:-55228665 None:intergenic
GGTTGTGGTGGTGGAGGTAA+GGG 0.410617 7.1:-55228626 None:intergenic
GTAGAGGAGGCGCTGGGCGG+AGG 0.411531 7.1:-55228602 None:intergenic
ATGGATTTGGAGAGAGAGAA+AGG 0.413511 7.1:+55228913 MS.gene36180:CDS
CATAATTATTAACTTCAATT+GGG 0.418080 7.1:-55234882 None:intergenic
TACTAACAAAGTCATCATTC+AGG 0.419940 7.1:-55242901 None:intergenic
TAGACAATTATTTCTGGAAT+GGG 0.421983 7.1:+55239117 MS.gene36180:intron
ATCTCGGCGCATATTGATTC+CGG 0.424138 7.1:+55228790 MS.gene36180:CDS
AAACGCATACAAGGGCAATA+AGG 0.424800 7.1:+55242876 MS.gene36180:CDS
TGATGGGCCCCTTGTAGCAT+TGG 0.427717 7.1:+55235746 MS.gene36180:CDS
GTCTGTACATCATGAGAAAC+AGG 0.428756 7.1:-55242844 None:intergenic
ATTTGGTTGAAGAATTTATG+AGG 0.429778 7.1:+55235922 MS.gene36180:intron
AAGTTGGAGGAAAGTAAGTT+TGG 0.429799 7.1:+55235774 MS.gene36180:CDS
AATGCTACAAGGGGCCCATC+AGG 0.432148 7.1:-55235744 None:intergenic
AGGTTCTAATATAGTTGGTC+TGG 0.432899 7.1:-55241178 None:intergenic
GCTGCGATTCAAGTTCCAAT+AGG 0.434766 7.1:+55232430 MS.gene36180:CDS
CGGATGAGAAGTGGCGGAGG+TGG 0.440238 7.1:-55228684 None:intergenic
TATATTGAACCACTCCCTGC+TGG 0.440989 7.1:+55240656 MS.gene36180:CDS
TCCCTCTTAACAATATGTTT+GGG 0.441138 7.1:+55242660 MS.gene36180:CDS
TCCATATTGTCCTTGCCCTC+CGG 0.442115 7.1:-55239792 None:intergenic
GAGGGATGGAGCACCGGTGG+TGG 0.442320 7.1:-55228647 None:intergenic
CAGTGAGCTTGCCTTTAAGA+TGG 0.442615 7.1:+55240995 MS.gene36180:CDS
CATTTGCCGGTCAACAGTAA+TGG 0.445976 7.1:-55231712 None:intergenic
TTCAGGCGAGATCTAAGCTT+CGG 0.446452 7.1:+55232398 MS.gene36180:intron
ACAGCTCCCTGAAATTCATT+TGG 0.448015 7.1:-55241225 None:intergenic
GAATTTGAAAACATGCTTGT+TGG 0.448521 7.1:+55240695 MS.gene36180:CDS
GAATTTCAGGGAGCTGTTGC+TGG 0.449262 7.1:+55241231 MS.gene36180:CDS
TACCCAAACATATTGTTAAG+AGG 0.449312 7.1:-55242662 None:intergenic
AGGGCTTTGCGTGTCCTTGA+TGG 0.451199 7.1:+55231645 MS.gene36180:CDS
AGGGGCCCATCAGGATTTCC+AGG 0.453687 7.1:-55235735 None:intergenic
TTCTAATAACTGCAGGGAAA+GGG 0.455989 7.1:+55242790 MS.gene36180:intron
CCTCCTTCTTAGATTGGTCA+AGG 0.458578 7.1:-55234906 None:intergenic
GCCTTCAGATATGGAAGCCT+TGG 0.460234 7.1:+55232636 MS.gene36180:CDS
GGCGAGGAGGGATGGAGCAC+CGG 0.462612 7.1:-55228653 None:intergenic
TGTAGCATTGGCTTTCAAGT+TGG 0.462821 7.1:+55235758 MS.gene36180:CDS
GAGGTGGCGGCGAGGAGGGA+TGG 0.462906 7.1:-55228661 None:intergenic
TATTACACATGAAAGGAGAA+AGG 0.462919 7.1:+55241338 MS.gene36180:intron
CATGAGGTTAGAGGAAAAGA+TGG 0.466239 7.1:+55228868 MS.gene36180:CDS
GTTCCAATAGGTTTGGAAGA+AGG 0.470412 7.1:+55232442 MS.gene36180:CDS
CCAATTGGTAAACGCATACA+AGG 0.471065 7.1:+55242867 MS.gene36180:CDS
CACCTCCGCCACTTCTCATC+CGG 0.477339 7.1:+55228685 MS.gene36180:CDS
TTCAGATATGGAAGCCTTGG+TGG 0.477544 7.1:+55232639 MS.gene36180:CDS
GATTCAAGTTCCAATAGGTT+TGG 0.481094 7.1:+55232435 MS.gene36180:CDS
TCAAGGTCAACATCTGAAAT+GGG 0.482950 7.1:-55232739 None:intergenic
ATCAACAAGCTTGATCGAAT+GGG 0.483081 7.1:+55231765 MS.gene36180:CDS
TCCTGAGCCCGTGATGTCAT+TGG 0.483219 7.1:+55238802 MS.gene36180:CDS
GAGCTGCCTGGAAATCCTGA+TGG 0.484021 7.1:+55235729 MS.gene36180:CDS
GCCAATGACATCACGGGCTC+AGG 0.484745 7.1:-55238803 None:intergenic
AACTTAGTTTCTGACCCAGC+AGG 0.485532 7.1:-55240671 None:intergenic
GTTTCTGACCCAGCAGGGAG+TGG 0.486192 7.1:-55240665 None:intergenic
TCCATTGATTCCTTCCACCA+TGG 0.486647 7.1:-55228748 None:intergenic
TGGATTTGGAGAGAGAGAAA+GGG 0.487503 7.1:+55228914 MS.gene36180:CDS
GAATTTATGAGGGCGTCATT+CGG 0.487962 7.1:+55235933 MS.gene36180:intron
TATGATTGTTGGCAATGATC+AGG 0.490116 7.1:+55241362 MS.gene36180:CDS
AGCATTGGCTTTCAAGTTGG+AGG 0.490353 7.1:+55235761 MS.gene36180:CDS
CAGTTTCTCTGAAGTTTACA+CGG 0.490583 7.1:-55239727 None:intergenic
GAAGTGGCGGAGGTGGGAGG+TGG 0.490966 7.1:-55228677 None:intergenic
ATGGAAATGATCCGGAACAT+AGG 0.492327 7.1:+55228766 MS.gene36180:CDS
ATAACAGGTTCTAATATAGT+TGG 0.493183 7.1:-55241183 None:intergenic
GTAGACAATTATTTCTGGAA+TGG 0.493561 7.1:+55239116 MS.gene36180:intron
TGGAAATGATCCGGAACATA+GGG 0.494806 7.1:+55228767 MS.gene36180:CDS
AGGAGAAAGGGTATGATTGT+TGG 0.495360 7.1:+55241351 MS.gene36180:intron
GGAGGTGGGAGGTGGCGGCG+AGG 0.496668 7.1:-55228669 None:intergenic
TAGGATCCTCTCTTTGGAAA+CGG 0.497432 7.1:-55238977 None:intergenic
AGCTGCCTGGAAATCCTGAT+GGG 0.499007 7.1:+55235730 MS.gene36180:CDS
ATTACACATGAAAGGAGAAA+GGG 0.499913 7.1:+55241339 MS.gene36180:intron
ACTTGAAAGCCAATGCTACA+AGG 0.503974 7.1:-55235755 None:intergenic
AGGAATCAATGGAAATGATC+CGG 0.506769 7.1:+55228758 MS.gene36180:CDS
TAAGGGCGTAGAGGAGGCGC+TGG 0.509312 7.1:-55228609 None:intergenic
TCATGATGTACAGACCCAAT+TGG 0.511195 7.1:+55242852 MS.gene36180:CDS
TATCAACAAGCTTGATCGAA+TGG 0.511555 7.1:+55231764 MS.gene36180:CDS
TTCCGGTAAGACGACGTTGA+CGG 0.512101 7.1:+55228807 MS.gene36180:CDS
CATCTTAAAGGCAAGCTCAC+TGG 0.512147 7.1:-55240994 None:intergenic
ACCTGATTTAAAACTTTCCA+CGG 0.514242 7.1:-55231795 None:intergenic
TATTTACATAAGAAGCAATC+CGG 0.515234 7.1:+55239773 MS.gene36180:CDS
GGTGGTGGTTGTGGTGGTGG+AGG 0.515402 7.1:-55228632 None:intergenic
TTCATTATTAATGTTAACAC+TGG 0.520495 7.1:+55235965 MS.gene36180:CDS
GTCAGTCCATTACTGTTGAC+CGG 0.522845 7.1:+55231706 MS.gene36180:CDS
TTGTGTAGGGAGCCATTCGT+AGG 0.523669 7.1:+55234091 MS.gene36180:intron
GTTGGCTTGGACCCAGAGAG+TGG 0.525045 7.1:+55239008 MS.gene36180:CDS
GCGCCGAGATCCCTATGTTC+CGG 0.525138 7.1:-55228777 None:intergenic
TCCACCACCACAACCACCAC+CGG 0.525491 7.1:+55228634 MS.gene36180:CDS
ACCATGGTGGAAGGAATCAA+TGG 0.526059 7.1:+55228747 MS.gene36180:CDS
GGATGAGAAGTGGCGGAGGT+GGG 0.526596 7.1:-55228683 None:intergenic
CAAAGCCCTCTCGACCTCAA+TGG 0.526914 7.1:-55231631 None:intergenic
GAGGATCCTACTTTCCGTGT+TGG 0.528663 7.1:+55238990 MS.gene36180:CDS
TTTGGTTGAAGAATTTATGA+GGG 0.530547 7.1:+55235923 MS.gene36180:intron
AAAGTACCAAATGAATTTCA+GGG 0.533724 7.1:+55241219 MS.gene36180:CDS
AAGAAGCAATCCGGAGGGCA+AGG 0.534420 7.1:+55239782 MS.gene36180:CDS
CATTTCAGATGTTGACCTTG+AGG 0.534524 7.1:+55232741 MS.gene36180:CDS
GTTAAGGTTGATGCTACAGT+TGG 0.538380 7.1:+55239698 MS.gene36180:intron
CTTGGACCCAGAGAGTGGGC+AGG 0.538466 7.1:+55239013 MS.gene36180:CDS
TGAGAAGTGGCGGAGGTGGG+AGG 0.539144 7.1:-55228680 None:intergenic
AGCACCGGTGGTGGTTGTGG+TGG 0.540622 7.1:-55228638 None:intergenic
TTATTAACTTCAATTGGGCA+TGG 0.545490 7.1:-55234877 None:intergenic
AAATTTATACCGGTATTCAT+GGG 0.545906 7.1:+55234129 MS.gene36180:CDS
CCGGCAAATGAAAAGATATG+AGG 0.546536 7.1:+55231725 MS.gene36180:CDS
TGCCCTTGACCAATCTAAGA+AGG 0.547053 7.1:+55234903 MS.gene36180:CDS
GAAATTGATGAGGCTCATGC+TGG 0.547319 7.1:+55237301 MS.gene36180:CDS
CTCCGAGTTGTCTTGACAGA+TGG 0.550196 7.1:+55240951 MS.gene36180:CDS
TTTGAACCGTTTCCAAAGAG+AGG 0.550615 7.1:+55238971 MS.gene36180:CDS
TGCAGGTTCCTCGCTTGGGT+CGG 0.551431 7.1:+55237019 MS.gene36180:intron
TTATGAGGGCGTCATTCGGA+AGG 0.552803 7.1:+55235937 MS.gene36180:CDS
GTACAACCTGCCCACTCTCT+GGG 0.555271 7.1:-55239019 None:intergenic
GTTAGAGGAAAAGATGGAGT+TGG 0.559042 7.1:+55228874 MS.gene36180:CDS
GAGGAGGGATGGAGCACCGG+TGG 0.561857 7.1:-55228650 None:intergenic
GATCCGGAACATAGGGATCT+CGG 0.561987 7.1:+55228774 MS.gene36180:CDS
CGAGGTTGCCGGATGAGAAG+TGG 0.562052 7.1:-55228693 None:intergenic
CTTGAAAGCCAATGCTACAA+GGG 0.562407 7.1:-55235754 None:intergenic
TCGGATGCATTCTAATGAGA+TGG 0.562575 7.1:+55237038 MS.gene36180:CDS
CCAATCTAAGAAGGAGGAGA+AGG 0.563037 7.1:+55234912 MS.gene36180:CDS
TGGAGGTAAGGGCGTAGAGG+AGG 0.563502 7.1:-55228615 None:intergenic
TGGTGGAGGTAAGGGCGTAG+AGG 0.566072 7.1:-55228618 None:intergenic
TCACGTTGATTTCACCATTG+AGG 0.566233 7.1:+55231617 MS.gene36180:CDS
CCCAAACTTCACCATGACAC+TGG 0.570430 7.1:+55228564 None:intergenic
TGCCGGATGAGAAGTGGCGG+AGG 0.570579 7.1:-55228687 None:intergenic
CTCCTTCTTAGATTGGTCAA+GGG 0.572025 7.1:-55234905 None:intergenic
AAGGGCGTAGAGGAGGCGCT+GGG 0.573949 7.1:-55228608 None:intergenic
TTGGCTTGGACCCAGAGAGT+GGG 0.575589 7.1:+55239009 MS.gene36180:CDS
AAACAAGAATGGCACCATCA+AGG 0.576342 7.1:-55231659 None:intergenic
ATGGTGAAATCAACGTGACC+AGG 0.577932 7.1:-55231612 None:intergenic
TTGTTGATAAATGCAAGTCT+TGG 0.577990 7.1:-55231750 None:intergenic
CACCATCTGTCAAGACAACT+CGG 0.580222 7.1:-55240953 None:intergenic
TAAAGAATCCTCACTTGTTG+AGG 0.580374 7.1:-55241257 None:intergenic
TGTGTAGGGAGCCATTCGTA+GGG 0.583947 7.1:+55234092 MS.gene36180:intron
ATATTGAACCACTCCCTGCT+GGG 0.584605 7.1:+55240657 MS.gene36180:CDS
CGACAAAGAACCATGGTGGA+AGG 0.585473 7.1:+55228738 MS.gene36180:CDS
AGTTTCTCTGAAGTTTACAC+GGG 0.587387 7.1:-55239726 None:intergenic
ACCCAAACATATTGTTAAGA+GGG 0.589921 7.1:-55242661 None:intergenic
AAAGCACTACCCATGAATAC+CGG 0.591743 7.1:-55234138 None:intergenic
ACGCATTAGAAGGGAGTACA+AGG 0.593468 7.1:+55239167 MS.gene36180:CDS
ACTTAGTTTCTGACCCAGCA+GGG 0.593711 7.1:-55240670 None:intergenic
CGCCACGGTAGCCCTACGAA+TGG 0.596561 7.1:-55234103 None:intergenic
CTGTACAGCCAATGACATCA+CGG 0.598694 7.1:-55238810 None:intergenic
TCCTCTATAGGAAATTGATG+AGG 0.602380 7.1:+55237291 MS.gene36180:intron
TCCAAGCCAACACGGAAAGT+AGG 0.607094 7.1:-55238996 None:intergenic
CTAAGTACACCATCCAGAAG+TGG 0.607750 7.1:-55234847 None:intergenic
ACCAAGGCTTCCATATCTGA+AGG 0.607852 7.1:-55232637 None:intergenic
ATTTCACCATTGAGGTCGAG+AGG 0.612144 7.1:+55231625 MS.gene36180:CDS
ATCGAATGGGAGCAGATCCG+TGG 0.615738 7.1:+55231778 MS.gene36180:CDS
AGCTCTTCGTTCGATGACAC+AGG 0.616647 7.1:+55242691 MS.gene36180:CDS
CTATGTTGAACGCATTAGAA+GGG 0.616925 7.1:+55239158 MS.gene36180:CDS
GCTAATAGAAACTGTGTCAG+AGG 0.618247 7.1:+55232678 MS.gene36180:CDS
TATGAGGGCGTCATTCGGAA+GGG 0.619141 7.1:+55235938 MS.gene36180:CDS
GAGGGCAAGGACAATATGGA+CGG 0.625747 7.1:+55239795 MS.gene36180:CDS
TACATAAGAAGCAATCCGGA+GGG 0.628089 7.1:+55239777 MS.gene36180:CDS
GGCGTAGAGGAGGCGCTGGG+CGG 0.628784 7.1:-55228605 None:intergenic
CGTGGCGCGAAAATTTATAC+CGG 0.630280 7.1:+55234119 MS.gene36180:CDS
AGGGCAAGGACAATATGGAC+GGG 0.632462 7.1:+55239796 MS.gene36180:CDS
GGAGTAGCGTGCCAGTGTCA+TGG 0.632933 7.1:-55228575 None:intergenic
GGGATACAACCACTTCTGGA+TGG 0.633267 7.1:+55234838 MS.gene36180:CDS
CCAGTCTCAAAAGATTCTGG+AGG 0.633915 7.1:+55238833 MS.gene36180:CDS
TTTCACCATTGAGGTCGAGA+GGG 0.634571 7.1:+55231626 MS.gene36180:CDS
TGTACAGCCAATGACATCAC+GGG 0.636422 7.1:-55238809 None:intergenic
GGGAAAGGGTGAATTTACAA+TGG 0.637374 7.1:+55242804 MS.gene36180:intron
AAGAATTCATGAGATTCATG+AGG 0.640449 7.1:+55228852 MS.gene36180:CDS
AGCCATTCGTAGGGCTACCG+TGG 0.646735 7.1:+55234101 MS.gene36180:CDS
TCTCTGGGTCCAAGCCAACA+CGG 0.648868 7.1:-55239004 None:intergenic
CAGTCTCAAAAGATTCTGGA+GGG 0.648996 7.1:+55238834 MS.gene36180:CDS
GAATGCATCCGACCCAAGCG+AGG 0.650277 7.1:-55237027 None:intergenic
GATGCATTCTAATGAGATGG+AGG 0.650710 7.1:+55237041 MS.gene36180:CDS
TTGAAAGCCAATGCTACAAG+GGG 0.652244 7.1:-55235753 None:intergenic
GGTTGCCGGATGAGAAGTGG+CGG 0.664004 7.1:-55228690 None:intergenic
ATCAACATAATTGACACACC+TGG 0.667202 7.1:+55231594 MS.gene36180:CDS
TTACATAAGAAGCAATCCGG+AGG 0.668312 7.1:+55239776 MS.gene36180:CDS
CCTTGACCAATCTAAGAAGG+AGG 0.673207 7.1:+55234906 MS.gene36180:CDS
ATTGTTGGCAATGATCAGGA+CGG 0.682238 7.1:+55241366 MS.gene36180:CDS
CAATTGGTAAACGCATACAA+GGG 0.713234 7.1:+55242868 MS.gene36180:CDS
CCACAACCGACAAAGAACCA+TGG 0.714944 7.1:+55228731 MS.gene36180:CDS
CAACCGACAAAGAACCATGG+TGG 0.720302 7.1:+55228734 MS.gene36180:CDS
GTTTCTCTGAAGTTTACACG+GGG 0.764274 7.1:-55239725 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr7.1 gene 55228577 55242909 55228577 ID=MS.gene36180
chr7.1 mRNA 55228577 55242909 55228577 ID=MS.gene36180.t1;Parent=MS.gene36180
chr7.1 exon 55228577 55228984 55228577 ID=MS.gene36180.t1.exon1;Parent=MS.gene36180.t1
chr7.1 CDS 55228577 55228984 55228577 ID=cds.MS.gene36180.t1;Parent=MS.gene36180.t1
chr7.1 exon 55231594 55231815 55231594 ID=MS.gene36180.t1.exon2;Parent=MS.gene36180.t1
chr7.1 CDS 55231594 55231815 55231594 ID=cds.MS.gene36180.t1;Parent=MS.gene36180.t1
chr7.1 exon 55232403 55232524 55232403 ID=MS.gene36180.t1.exon3;Parent=MS.gene36180.t1
chr7.1 CDS 55232403 55232524 55232403 ID=cds.MS.gene36180.t1;Parent=MS.gene36180.t1
chr7.1 exon 55232612 55232762 55232612 ID=MS.gene36180.t1.exon4;Parent=MS.gene36180.t1
chr7.1 CDS 55232612 55232762 55232612 ID=cds.MS.gene36180.t1;Parent=MS.gene36180.t1
chr7.1 exon 55234099 55234170 55234099 ID=MS.gene36180.t1.exon5;Parent=MS.gene36180.t1
chr7.1 CDS 55234099 55234170 55234099 ID=cds.MS.gene36180.t1;Parent=MS.gene36180.t1
chr7.1 exon 55234838 55234933 55234838 ID=MS.gene36180.t1.exon6;Parent=MS.gene36180.t1
chr7.1 CDS 55234838 55234933 55234838 ID=cds.MS.gene36180.t1;Parent=MS.gene36180.t1
chr7.1 exon 55235726 55235814 55235726 ID=MS.gene36180.t1.exon7;Parent=MS.gene36180.t1
chr7.1 CDS 55235726 55235814 55235726 ID=cds.MS.gene36180.t1;Parent=MS.gene36180.t1
chr7.1 exon 55235934 55236000 55235934 ID=MS.gene36180.t1.exon8;Parent=MS.gene36180.t1
chr7.1 CDS 55235934 55236000 55235934 ID=cds.MS.gene36180.t1;Parent=MS.gene36180.t1
chr7.1 exon 55237024 55237062 55237024 ID=MS.gene36180.t1.exon9;Parent=MS.gene36180.t1
chr7.1 CDS 55237024 55237062 55237024 ID=cds.MS.gene36180.t1;Parent=MS.gene36180.t1
chr7.1 exon 55237301 55237361 55237301 ID=MS.gene36180.t1.exon10;Parent=MS.gene36180.t1
chr7.1 CDS 55237301 55237361 55237301 ID=cds.MS.gene36180.t1;Parent=MS.gene36180.t1
chr7.1 exon 55238750 55238859 55238750 ID=MS.gene36180.t1.exon11;Parent=MS.gene36180.t1
chr7.1 CDS 55238750 55238859 55238750 ID=cds.MS.gene36180.t1;Parent=MS.gene36180.t1
chr7.1 exon 55238960 55239034 55238960 ID=MS.gene36180.t1.exon12;Parent=MS.gene36180.t1
chr7.1 CDS 55238960 55239034 55238960 ID=cds.MS.gene36180.t1;Parent=MS.gene36180.t1
chr7.1 exon 55239120 55239188 55239120 ID=MS.gene36180.t1.exon13;Parent=MS.gene36180.t1
chr7.1 CDS 55239120 55239188 55239120 ID=cds.MS.gene36180.t1;Parent=MS.gene36180.t1
chr7.1 exon 55239704 55239825 55239704 ID=MS.gene36180.t1.exon14;Parent=MS.gene36180.t1
chr7.1 CDS 55239704 55239825 55239704 ID=cds.MS.gene36180.t1;Parent=MS.gene36180.t1
chr7.1 exon 55240655 55240780 55240655 ID=MS.gene36180.t1.exon15;Parent=MS.gene36180.t1
chr7.1 CDS 55240655 55240780 55240655 ID=cds.MS.gene36180.t1;Parent=MS.gene36180.t1
chr7.1 exon 55240920 55241040 55240920 ID=MS.gene36180.t1.exon16;Parent=MS.gene36180.t1
chr7.1 CDS 55240920 55241040 55240920 ID=cds.MS.gene36180.t1;Parent=MS.gene36180.t1
chr7.1 exon 55241165 55241265 55241165 ID=MS.gene36180.t1.exon17;Parent=MS.gene36180.t1
chr7.1 CDS 55241165 55241265 55241165 ID=cds.MS.gene36180.t1;Parent=MS.gene36180.t1
chr7.1 exon 55241353 55241413 55241353 ID=MS.gene36180.t1.exon18;Parent=MS.gene36180.t1
chr7.1 CDS 55241353 55241413 55241353 ID=cds.MS.gene36180.t1;Parent=MS.gene36180.t1
chr7.1 exon 55242659 55242712 55242659 ID=MS.gene36180.t1.exon19;Parent=MS.gene36180.t1
chr7.1 CDS 55242659 55242712 55242659 ID=cds.MS.gene36180.t1;Parent=MS.gene36180.t1
chr7.1 exon 55242805 55242909 55242805 ID=MS.gene36180.t1.exon20;Parent=MS.gene36180.t1
chr7.1 CDS 55242805 55242909 55242805 ID=cds.MS.gene36180.t1;Parent=MS.gene36180.t1
Gene Sequence

>MS.gene36180

ATGACACTGGCACGCTACTCCAAATCCTCCGCCCAGCGCCTCCTCTACGCCCTTACCTCCACCACCACAACCACCACCGGTGCTCCATCCCTCCTCGCCGCCACCTCCCACCTCCGCCACTTCTCATCCGGCAACCTCGCGCGAGCAAAAGCAGCCACAACCGACAAAGAACCATGGTGGAAGGAATCAATGGAAATGATCCGGAACATAGGGATCTCGGCGCATATTGATTCCGGTAAGACGACGTTGACGGAGCGAGTTTTGTTTTATACTGGAAGAATTCATGAGATTCATGAGGTTAGAGGAAAAGATGGAGTTGGTGCGAAGATGGATTCTATGGATTTGGAGAGAGAGAAAGGGATTACTATTAAATCTGCTGCTACTTGTTGTAATTGGAAAGATTATACGGTACTACGTTCATTCTTGCTTTGTGATTAACTAGTTTGTGTTTGTTTTGATGAATTCTAGTTGAAATTTGAAGGGATTTTGATTCTGTTTGGTAAAGAATAGCAAGTATAAGATAGCTTACAGCTGATAACTGATAAGATAGCTTACAAAAGATAACTGATAAGCTAGCTTATAACGGATAGCTGGCTAATTGAATTGATAGTGTTTGATAAAATTAACAGTTAAACTATGGTAAAGAATAACAAATAACTGATAAGTTAGCTTATAGTGGATAGTTGATAAGCTAGCTAGCTGATTGAATTTAGAGTGTTTGGTAAAATTAGTGGTTGAACTAGCTTATGCATATGAAATGACATAAAAAGATAAAATTAATTAATATTTTTTTTTCTGATGAAGGATAAAGGGTAAAATTGAGATAAAAAACGATAAGCTATAAGCTACTTGAATTAGTTCATCAAAACATGCTATAAGCTAGTAAGAATATGCTATAAGCTCATAAAAAGTAAGGGTTAGATCCTTTTTAGTCAAATGAGCTTATAAGTTATAAGAAATAAGCTATAAGTTCATACATGTGGCTTGCCAAATTGACCCTTAGGATCCTTTGATTTAGGCTCGATTTTGCTAATAATAGCGGATAACTTATAAGCTAGTTTATAGTGCATAACTGATACGCTAGCTAATTGAATCTGTAGCGTTGGTAAAATTACCAGTTGAACTAGCTTATATAAATTATTTTCAAAAATACCCTATCTTCTTTTTGTACTTTGTTCATACTTGCTTTGTAACTAACTATCTTATGTTTGTTTTGCTGAATTCTAGTGAATAAACCGTACATTTAGTCCCTAAACCATCACACTCTCTTGAATATAGTGTGTGTTTGGTTTGGTTCAACAGTGACCCAATTTGATTTTGAGTTAATTGATTCTAGCTAAAAATGAGTTGAAGGTAAAGTATATTTCCATAAAAGTGGGTTGAACCAAACATTTAAATGTAAAAATCAATTTTAGAATAGAAAGCTCTAATTTCAAGCTGTATAGAGTAACCAAACAGGTCAAAATCAATTCTACACTTCTAGAATCAATTTTGGCTGCTTCAAAGTGGAACCAAACATACACTTAGTACATAAACTATCTAAATATAACAAGTAGAGTCCCTAAAGTGTATAAAATCTGTCAATTTGATCCTTATTTTTAAGATATTAAAGACTAAATTGTTGAAATTTCAAATACTTTAGGGACTAAATTGATGAATTTCCTATGCTTTAAGGGTTCTTCTTATATTTATGGGAAAACAACATTTTTTGTCCCAAGAAGTGTAACTTGCTGTCACATTTTCTCTTTTATTTGTAAGTTTGGACCTTAATTTTGTTTTGGTGGTCAATTTAGTCCAAAAAATCACTATCGAAAGAGGAACTAGAGGTGTTTTTGCAATTCCGATACATTTAGGGACTATAGTGACAGAGCCTCAAACATTTGGGGACCAAAATGGCTTTTTTCCTATATTTATATAGTTTAGGGACTAGATTGGAGAGATTGTGATAGTTTAATCAATTCTAGGTGAATCTAATTGAAGTAGAGTGAGTAAATTTTGAAAACTTGTACGCAATTGTGGTGTCTAATCATTGCAAGAGCCATATGAGTGACTAAACTCTCCCTCAATAATTTGAAGTTTTATGCTTCTGCATTTTTAGATATGAATTGAACTTGAAACTACAAAGGCGGGGTATATGAGTGCTCTTTTGTTACTACTATTATTATTACTATTACTGTTACTATTGTCAATCTCAATGATAATTGTAAAAGAATAAAAAAGAATAAAGTGATTAAAGTAGTAGTGAGTGAGTCTTTTCGGAGCATGGATTTGGATAAATGACTTAATTAATTGTTTACACAATATGTGTTTGTCTTATAGGAGATTATAACTAAGCTATTTCACGATCAAAGAGAGACATATCAATTAACACTTATCTTTTCGAAGCATGGATTTGGATAAACGGCTTAATTAAGCGCTTACACGATAAGCATTTATCTTATAGGAAATTGTAAATAAGCTATTTCTGCAATCGAAGAGGTACATATCAACTAACACCTATCTTTTACGAGATTATGAAATAAGCTGAAAATAGTTTATGGACAAATCTATTTTATCAGTTCTTCCCACACACCCAAAAGTACTCTTACTTCATAAAGTTAAGACTATTGAGCTCTTTGAAATTTTTCCGTTGGTTTTCAAAATATAGGGTAATAGGGATTGAGAATTGAATGTCAAGTAATTAATTTTCCCTTGTTTTTGGGAGGAATTTGTGATTGGAGTGCTGTTCTGTTATCTTAGTCAGTGTAAGTTAATTTTGGTGATTAATCGTCGTCATAGAGGAAGGATAGCCGTTGAAGATATTTTCTGTTTTTTAGTTTTAGTTATGCATAATTGAAATGGGGAAATTATATAAAGACTACTTATTTTTCCTGTTTACAGTATCCACTGGAAGTTACAATTTTATTTATCAATACTGGAAGTTACAACTTATATTAATGTATTCTTCAAACTGCTTCTGATAATGTCTTTTCCTTGTGGTTATTTACATTGAACTTCTGCAAAATGTTTCGTTGCAGATCAACATAATTGACACACCTGGTCACGTTGATTTCACCATTGAGGTCGAGAGGGCTTTGCGTGTCCTTGATGGTGCCATTCTTGTTTTTTGTAGTGTTGGTGGGGTGCAAAGTCAGTCCATTACTGTTGACCGGCAAATGAAAAGATATGAGGTTCCAAGACTTGCATTTATCAACAAGCTTGATCGAATGGGAGCAGATCCGTGGAAAGTTTTAAATCAGGTGTGTGAGATTTATGGGGGTCAGCTAAGATAATAGGTTTTATAGTTATATTCCCATTTACACAAATTTCGTTAACTTGAAAAGAGATGTCCATTGGCATTTATGGAGGTCAGCTATACAATTTGTTTTATGACATGACAACTTCTACTATTTATTTATTTATTTGTTTATTTATTACGACCTCCATCCTAAATATAGGACCCCTTTGAGTAAATCGTGTTAATTAAAAAAGTTGTGGTATTAATTTGTTGACAATTTGTATTGTTTTACAAATTTACCCTGCGTGAGAGTGAATTAGATAATGTTTTCATTAGAGTATTTTTTTGTTGTTGAAGGAATCAGGGTATTTATTATAGATTGCAGAAAAGGTTGTAATATAATTAGGGCTATATTGGTAATAAATAATAAGTGCAGTTGAAAATTTGAAAGCGGTCTTATATAGAGGGGCAAGACAAAAACTGAAGAGGGTTCTATATTTAGGAAGATAGTAATGATTAACTTTGTTTTTTTTTAAAAAAAATTCATTCACATCCTTTTTTTCGAATTGAAAGTTTTCCATTTTGAGACCAATTTGTTTTGTTTTTCAGGCGAGATCTAAGCTTCGGCATCATAGTGCTGCGATTCAAGTTCCAATAGGTTTGGAAGAAGGTTTTAAGGGACTTGTTGATCTTGTGAAGTTAAAGGCCTATTATTTTGATGGTCCCAATGGGTCTGTTTTCAAAATTCTACATTATTTTCTCCGAAGATTACGTCTTTGTTATATTTCTTCATCTTACTCAAGTGTTTCTTATGGCAGAGAAAAACTTACCATTAAAGAAGTGCCTTCAGATATGGAAGCCTTGGTGGCAGAAAAAAGACATGAGCTAATAGAAACTGTGTCAGAGGTTGATGATATACTTGCTGAAGCGTTTCTTAGTGATGAGCCCATTTCAGATGTTGACCTTGAGGTGAGTGGGTAGCAGTCTTTTTGTCCTGAGTTTTGCATGCCAATTATTTGTTTTATGGGAAATGCATCATACTATCCTACTTCTAACAATTAGTTTCTTGGCCCGTTCTCTGAATGAATGTGCCGTGGACCTTATGGTTTGAGCACTCTAGCTGTGCATAGAAAAAAATGCTATAGACGTGTCACAGTGTCAGATTGTAATGGTCTCATTATTTTAACAGAAAATATATTCACACAGTTCGTATTTTCCACCGATTCACCAATCTGCATAGGAAACTGCTCATGTGCATGGTTTTGTCTGAAAATTTTAAGAACACATAAGTCGATGTTGTGTAATTTTGACCAAAAAAGGCATGTAATAGAAAGCATCAGGTGCTTTCCGCCTATCTTGGTCCCTGGTAGGAATATCCTTGGCTTGCTTGTTTGATGAGGTGTGATCATTATGGTTCTCCTTACATTTCATACCACGACTCTACAGCAGCAGGCCAAAAGGAGTAATTGGCTGCACCTACCAATTTTTCACGTGATCAAGGACATAATGGTCAAACTGACATAGAAAGTGCACTAGAGGTAGAGCTAGTGGTATGGTAGGCATGATAGTTTTGGTGCAGATTAAGGCTCAGGAAGCTGGGGTGATGCACTTGAAGGTTTTGATCTGAAAAGTGTGCGTGAACAATATGTATCAGATCGAGATGGATATTCTGGTTGGCCCAGGAACAATGAGGTGAGCTGGGAAAAGAATGAGAGGATAGCTGACGGGGTTGCGAGAATATCTGGTGGAAGAATGTGCTCATATCCACTGTCACGTGGAAGAATGTACAGAATGTGGAATACACATGTGTGAGTTTGTGTTGACACTAGAGGTCTCTGTTGGTTGAGATTGGGATAGTTGGCGACTTCCGTTGTTGATTTGGCGGGTCATCAGCCAGTGGGATGCAGCCGTTTGCATGGCCCCTCCCGGTGATAGAGCACCTAAACTGGTGAAGCACTATGGTGTGATGGATTATTAAGCCACCGATGCCATTTATAATTAGGAAATGGTTTGAGGCAAAATTGTATCTAATCGGTCCATATTATAATAAATATAAATATTTACGTTATATTATTAACTAGAAGAGGAATAATCTCCTATGTTGAGCTTTTAATTGAACTAATCATCTATCTATAAGTCAGTAACAACTAATAATTCTGATTGTACTTGTGCTTAAGTCTAACATAAATTTTATTAGTTTCTAATCTAATGATAAATGAAAATCACTTTTTAGGCCTCCACCTGCAGTACCTCTCCACATATATTTTAATTTAGTTTATAATTTCCGGTTATTTTGTTTGTGTAGGGAGCCATTCGTAGGGCTACCGTGGCGCGAAAATTTATACCGGTATTCATGGGTAGTGCTTTCAAAAACAAGGTAGTCATTTAACTCACCTTCTGTTCGTAACTTCACATATACATTCATGCTGCATAGCGCTGCCTTTGTTCCTCCCATTTGGCAAAGTATGCATAGTATTCCATTAATTTTGACTTAATGATATGGTAGTATGATTATGATGCAATATAGTCCGGATTTGAAATTGGTTCCATTTGTAATATTCTTATGTGCAGTATTTCTGGGATACATCATAGTTGCTATGTGTATGCATCCATGAACAACGTGCATGTCTTTCCTTTTTCACTTCTTCTTTGATCCCTGATCTATCTCTCTTTTGAAAGTTGGACACATTTTTCCTATGTTTCAGAAATTATCTAATGGATTATTGTTTGGTTCATTTCATTTTCTTATGTGATATTGTTTCTATTGTCTGAAAATTCTTCTTGCCTTCTTAATCTGATTCTATCAACTGTGTTAATTATGAATCTTTTCATCACCATTTCATCTAGCTGGCATCTTTACTCTAACCCGAAGTTTCAATTCCCCTCCCCATAATATTATTTCACATGCATGCATACACACATCGGCATGCCCAACCACATTTTTCTATATCATCCAAACTTGCACATTCTAGATACCATGCATACTGTTCAATTGTGTGAATCACTACTTCTCTAATATATATGATCTTCCTCTACTGTTACAGGGGATACAACCACTTCTGGATGGTGTACTTAGTTATTTGCCATGCCCAATTGAAGTTAATAATTATGCCCTTGACCAATCTAAGAAGGAGGAGAAGGTACCTGATTCATAGAAAGTTTGTTCCTGTTTTACATTGATATTGTTTTGCTTTCGTGATTATTGTAAACTTCAAATTGAATTTTAAGGCAAATTTTTTGAATCATGAATTATAGGATCCTCTATTAAAATTATACAAATTGTTTTGAATGTTTGTTCTTCATAAATAAAAATACCAGTAGTAAACGTTATACTGCATCTAGGCGGTATTGTATGTCACTTTGCCAGAAAAGCAATGGAACCCCAAAGTTCAAATTAACATTTAATATAATCAAGATTTAAATTTTGGTAATAATTAATCACTACATATTAAACAAAATGTTAAATCTGAAAGGTTTAGGTCCCATCTTCCTAATAAAATTATTTTTCAAATAGAAAATTAAGGTTTATGCTTTGAGGATATTTTGTATTCAAAAGTTAAGGCAACAAGGTGGCTACCATTATACAAGCTTGGGATGAGTTTCTCAGCTGCCCTTGCTATTATTGCTTTTGAAAATGGGAAAATACCAAGTATAAAGTAAGTCTTGCATTCACAATCTCACGTTGACAACCCACATGGGCTTTAGGCTAGCTGATTATTTTTCCTTGGAGACAAAATTTCTGCAATAAAATCATATGATTATGGAAATTGTCTTGGGTTGTATGCTGCATACTCATGATCTAGAGAGATTACAATCGTAATAAATTGTGATATGCATGTGTTTCAGATACTGTTGTTGCCTTGCTATATATATTTTTTTCATACAAACAAAAGAGAAGTTACTGGTTATTGTAATAATCTTTACTTGTCTAGGTTGAGCTGCCTGGAAATCCTGATGGGCCCCTTGTAGCATTGGCTTTCAAGTTGGAGGAAAGTAAGTTTGGTCAGCTAACATATTTAAGGTACTTCTCACCTTTGGAGATGGTTAATTCCATTTATCGTATGTATATAGATATTTCAAATTTGCGGTAATCTTTCAGTACATTGCACATAAGCTAATGGATTGATTATTTGGTTGAAGAATTTATGAGGGCGTCATTCGGAAGGGTGATTTCATTATTAATGTTAACACTGGCAAAAAGAACAAGGTAAGTTTAAGGTCTTTCAGTGCTTCAGTTTGATTGCATTATTCTAGTTCGTATGTATGTATTTCCTTTACAGGATAGAGCTATAACTCAATTACTGATTTATTTTTTGAGTTTTTTTACTGTCAAAAACCATCTATAATATTGTTTGATCCAACTTTACAGTTTGTTTTTCTACAATAATTTAGTCCCATACATGAAATTTCTACTAGTTCATCATGGATTCAAATCTTCAAGTTTAAGTGAATGGATTCAAGTTCTGTTATGAACCCACATACAAGAATTGAAGAATAATATGAAATATAAAGAAAATGAATCTTTTGCTTCTGAATGAAATCTGAAGATAAAATGGGGACACTTGAAACATATCTACATTGGGGGAATATCAAGTTGGCTAGTTTGAGTATGAAGGGTTACACAATTATTTGGTTCAACCTAGTAAGTGATAAAGGATGATCTAACACAGGCAAAATTTAAACAACCTATGATTCAGAAACATTCTTGAGGGAATCTTGAATTAAATCGATAAAATTGGGGATATATCGAGCTATTTTATTTGGTTTCCCTTTTTCTTCTAAACTAATGGACACTAGCACTATGGAGGTGTTTTACCTTTCTGTCCTAACAAATTCTTCCAAGCTACTGTTCTAATAGCACTATGGACGACCTTTTAGATTTAGAAGCTTATCATCCTACATAAATGCTATCTCTAACTAGACATATCCTCCTGCATGTACTCATAGTCTCATATGAGGATGTTTTTTGAGTTGTCATTTTGTACCTTTTCTTCTTCGTCTTGAACTTTTTTTGTTTATAGAAGGCAAGTGAACATGAAAATTTAAAACAGTACAACAAGTACTGGAACTAGTTTTAGTTTTAATTAGTTCGATGTGAAGCTTGCTACATAATATATAAACAACTAAATGCAGTGCTATTCCCAAGTAAGATCATTGCCATGTCCCGTCTTTTTGCATGACATTTAGAGACTAATAATTTGCGGTTGAAGCTTTTGTTTTGCCAATGCAGGTTCCTCGCTTGGGTCGGATGCATTCTAATGAGATGGAGGTTTGTGTTTAGACTCTAATGATGATTTTCCTATAAAAATGAATGCCTCTGGAAACTGCAAATATTTTTAATTAGGGAATTAGAGTTATAAGTAGGTCATAGGATGTTACTTTCGGTGAAGGGAAAACTTGTAGGGTTTTGTCTCTCTTCTAAATTCATTCTGAAGATTTTTAATATTCAGCTATTCTCTGTCATTTCTGTGAAACTTCTAATTGAATTGAACATTTTTCCTCTATAGGAAATTGATGAGGCTCATGCTGGCCAAATAGTTGCTGTATTTGGTGTTGATTGTGCATCAGGTTATTCTTTTCACATTGCTTGGGCATATGTGCATTTCTAAAATTCTATATTTCTCTTTTTGTCATTTTTTGGCTGATTAGATGTTGGCCTAGAATCTTTTGGTGGTGGTTTAGAGTTTTTTTAAATGTGGCATTCTTGGAGGATAAATTTAAGTTCAGGGGTTGAAAAAGAAAACCGAAAAAATACAACAGCTCTACTTCAAAAAATAAAGAGCAAAGCATGTTATGAATTCACATTTCCTTTAACTGCTCTGTTGCAGTCCTGAATTCCCATATAGTCACAAACACAGTTAAATCTCATGTGACATGTAAATGAAAGATGTTCTTAAAATATAGGCATTTCAATTCAAAGTCATAAATGCAATTAATTTCAATCTCATGTTTCTTCAAAAAAAGAAATTCAATCTCATGTGACAATTCAATCTTGGTTGTACTCCAAATACTAAAGACCAAGGCGGGTTATGAATACAATAATACTTATGACTCTTCTGCTTGTCAGAAATAATCATTCACATTGCCTTTAACAACTGCAAGCAGAGCTCCAGTACTGAAGGCCTATAAAGTCATAAACACAATTTAACTCATGCGACATGTAAAGGAAGAATTTCCTTAGGCATTCCTCTCCAACAAATATGCAAGAGAACCCTATAAACTGCATACTGAAACGAAGTTCTCTTATTCTTACTGTGGACATCTGCGTCACTGTTCAATAACTGACGAGAAACCGAGATAAGGTGAAAGTTTGCATGAGAATATTGGAGAGAGAATACTTTGGAACTGAATTTGCAACTGCATTCTCTGTCAATGTTTATTGGTTACAGGGTATATATAGTTAGATATAACTTGTCCCTGATTAGCACTACCTTAATTGACAGCTTTTAATTTAGAGATCTATCAAAAATGTGTGCTCAACAAAGAGCCTAACACAAGTAAGTCAGATTGAAGGACAATCAAATTTGATATAAATAAATATTTCAAAGTTGTCTGGTGCTAAAGTTTAGTATTTAGGATGATTAATACATGCATTAGTAGTACTAATAATATAAGTTCTGTGTAGTTCTATCTGGGTTATAGTTTACACTGCCTCTGTCCTTTATTATTGACCCACTTACAAATTTCACGGACATCAAGAAGAAAACAATTTATAGCAATAAATTTTTAAAAATAGTTATTATTTTTAATAATTACCCCTACAATTAATGATTTCAGAAGAGAGAGAAAACAAATTTCGTTTCCTAATTGTAAATTAAGCAGAGGTATTTTTGTAAAGAAATTCTCAATGTAGGTGGAAGTTTGTAAAGGGTCTTATGTCAAAAGAGGGTTTTATAATTAGGGACAAAGACACTATATTATACTGGCTATAATATTTTTTTTTTCTTGGTCATCAGGAGATACTTTTACTGATGGGTCTGTTAAATACACAATGACTTCAATGAGTGTTCCTGAGCCCGTGATGTCATTGGCTGTACAGCCAGTCTCAAAAGATTCTGGAGGGCAAGTGAGTAATGTCTTTTTGTGTACATGCCAACCCTGCTGTCCCGGCTTCAAAAGTTGTATATTGTACAACTAAATTGATTTTCTCCATGTGTTGCTTATAGTTTTCAAAAGCTTTGAACCGTTTCCAAAGAGAGGATCCTACTTTCCGTGTTGGCTTGGACCCAGAGAGTGGGCAGGTTGTACTTTTTCCTTTAATATCTTCCTCATTTAATTGACAAAATTATTGTTTTTATGATGACATTAACATCCTTTGGAGTGTAGACAATTATTTCTGGAATGGGAGAACTGCACTTAGATATCTATGTTGAACGCATTAGAAGGGAGTACAAGGTACCCTTTTTACTCAACTTGTATTTTTTTTTCCCTATGTTGTTGATTCATGCCAAATGTTTACCTCGGAAGTTTCATTCTGTTAGAACTGGTATCAATATTTGAATAAAGTAGGATAAGAGAAGAATTTATAGGTTAATTCCTCTGTAGAATTGTTTCAAAATAGATATAGATTTATTATAGCAATCACACACCAGAACATAAATGAAAGTCTAGAGAGATAACGATAGTAAAGTAATAAATTTATGTCCTTCCAAGAAATGTGAGAGTCTTGGTCTCTCCCTTCCGAGAATGATAGACCTTGATCTCTCCCTCCCAATAACCAATCAATAATTTCCCCCTTCACTCTTCCCTTGTCTTTCCCTATTTATTTCTAAACATAAACACACCATAATTGGACAATTAGTAATAAAACGTAACTGCTCCAATAACTGTTAAAGTTATTTCTTATCTTGTAGTATTGTATTTTGTTTGGTACAGTGTCTTAACAAATTTTTATATCTTTACCTGTTAAGGTTGATGCTACAGTTGGAAAGCCCCGTGTAAACTTCAGAGAAACTGTTACTCAACGTGCTGATTTTGATTATTTACATAAGAAGCAATCCGGAGGGCAAGGACAATATGGACGGGTCATTGGGTATGTATAGATTAGTCATTCTTATTTTATTAGTATAAAATTTAGTGTTTAATTCTAGTGATCAATTTCACAAAAATTCAATGGAAGTGTCCACAGTCTTGCTGATAGGAAGTGTTTTCCTGAAAAAATTATACACAATGATGGAAACTTTAAAAGGAGTTTGAGATAAAATGAGTATATAAGATTTTAGAAGATGACAAGTATCTTATAATATCTTGAAATATTTAATTATCTGATAGGATCAATTTCTTATCTTGTAACGTGTCTTTCCGTGTTTTTATACAATTAAGAACTTACTTTTGGAAATCAGCTAGTTTCTTGAACACACAAATTTGGCTTTCTCAGATTTATCATATCATATGTTAAGATTCTTTGGGCCGACACTAGCAAAAAAAAGAAATTATTCATCCCTATAGTTTATTGATTTACAAAAGAAAAAGGGTACGTAAGAGAGAATACTCTCCTCACACTGGATTTCCAGTCAAATCTATTAGTTTGCAAAAAATCCCTAAGGCATGAATAGAAATCTTTTTAGACTTCCTGATTGTACAAAGGCCTAAGGATGCCAGATAGAAAACTACCCTAACAACCTAACTAACTAACTAAATTACCTTACATAACTAATTCTTATTTTTCCTCCTTAAGTTTGAACTTCTTCCTGTGGTAGATTTGCCGAGGTCTGGTTCTTGATTTCTTAACAACGTTCCTAACATCATATATGTTATCTTGTGCTGTAAATTATTATTACCATTCATTTGATAGAAAAGCTAGTTGTGATACTACATCTTCTATTTATTGATGGCATATATTTTATTCAACATGATCGCAGGTATATTGAACCACTCCCTGCTGGGTCAGAAACTAAGTTTGAATTTGAAAACATGCTTGTTGGTCAAGCTATTCCATCAAATTTTTTCGCTGCAATTGAGAAAGGTTTTATAGAAGCTGCCAACTCGTGAGTGAAATTTTACTAGTTGCTTAATTTTGCTATGTAGATTCTACGTATATTTGTTTTTTCAATTTTTGTGTGCAAGTATGATTGAACTTATATTTTTCGTATGGCAAACTGTAACCTGATATTGCTCTTCACACAGCGGTTCCTTAATTGGACATCCCGTTGAAAATCTCCGAGTTGTCTTGACAGATGGTGCTGCTCATGCTGTTGATTCCAGTGAGCTTGCCTTTAAGATGGCTTCTATCTATGCTTTTAGACAGGTTATTGTTTTCCTTCACCATCTATATTTAATGTATTGCATTGTACATACTGTAGTCGTCTATTTGATTCCTTCACATAGATATGACCTCATTCTTTGACAATTTGTGCTGTCTTTTGTAACAGTGTTACGCTGCTTCCAGACCAACTATATTAGAACCTGTTATGCTTGTTGAGCTGAAAGTACCAAATGAATTTCAGGGAGCTGTTGCTGGTGACCTCAACAAGTGAGGATTCTTTACCTATTTTCTAGATATTATTTATTTCTGGTAAATTTTTAGAATTTTCTGACATACTTTTATTACACATGAAAGGAGAAAGGGTATGATTGTTGGCAATGATCAGGACGGAGATGACTCTGTCATTATAGCTCATGTAAGTACCTAACAGGTCTCTTAAAACATTTTACCTATTATTGAAGTTAGTTCCCATGGTTTTTGTCTTTGGCTGTATAAAATTACTCCCTCTGTTCCTAATTACAAGACCTTTTATAAAAAAAATTATCTATACACAAAGGGGTAATTTAGTAATAATCATATACATTTGAGACAAATTTATTACTCCAATGACTTTTCTTAATACCCGTGATTTTTGTTATAAGGTTCTAGGGACGGAGGGAGTAATTAGTTATGATTTGATGATGGTTTGAAACATGTACATGCATCTGTGTTGGACTCTAACGTACAGTTACCATTCATCCTGGGCTAATTAACATATTGTTTAAGAAGTATAGATACACATGTTTGGTTCAACATTTTAGAGGGGAGGGGTGTAAATCACTACTCTCCACTGTCTCCCTTCCAATATGTTTGGAGGAGAGATGATGCAATGACTAAAATATGCCTAAATAAAATGTAATGTTGGAAGCCTTAGTCACCTTCATAGTGGGCCCACCTTGTGCTTCTATCAACCGCAGCCTACAAAACGTTCATTGCGTTGGGTATGACAAGGGGTGTTGACATCTCACATCGGCTAGAGATGTGGCAAAAATAGTTCTTGTAAGGCTTAAGAAATCCTCATCTCTAGAACTAGCTTATGTAGTTGAGTTATACCATCCTCTTCTTTGCGGCTAGTTTATGTAATTGAGTTGGGCGTAACCCAAATTCTAAGACAGAATTAACATATATCCTTTATTAATTATTGGGCCTCCCGTATCGTTCCATGCTTCAAGTGTTCAGTGTAGGGCATCCCTAGAGCTAGCTTTCAAGGTTGATTTGCCGCTGGTCCGAAATCTAAGATTTAAGACAAAAGGTTAGGTGTAGAAAAACTAAATTGGTTTTGAATTCCCTCCCCTCTCCTTGTGGAACCAAACAAGGAGTTATTCCCTTCCCCTCATTTGTACACCAACACTGCATTAGGAAATGGCTTTACGTTCTTGATGTGATGCTGCTGGATGCCAACGGGCAACTAGTTGTATGTTTTTTGGCAGAATTGGGTTGAGGTGCAGTTATGCGAAATATAATGGTGGTGGAAAATTGTTATTGGGAAAGATTGAAATTTACTGGTTTATTGTGATTCTCACTTGTTTATTTCAAAGATTGATGTAGGTTTTGCTTTTATCCTTAATTTTTTTGGCCCATTTGACATGACTAATTTAGCTGCTGCTGTGAATCATTTCAGGTCCCTCTTAACAATATGTTTGGGTACTCTACAGCTCTTCGTTCGATGACACAGGTGAATATCCTGCCACCCATGAGTATTTCATGTCTTGATCGAAACTTATTTAGTTTTTGATTTCGCGCTGTTTTTTCTTCTAATAACTGCAGGGAAAGGGTGAATTTACAATGGAATATAAGGAACATTCACCTGTTTCTCATGATGTACAGACCCAATTGGTAAACGCATACAAGGGCAATAAGGCGCCTGAATGA

Protein sequence

>MS.gene36180.t1

MTLARYSKSSAQRLLYALTSTTTTTTGAPSLLAATSHLRHFSSGNLARAKAATTDKEPWWKESMEMIRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGKDGVGAKMDSMDLEREKGITIKSAATCCNWKDYTINIIDTPGHVDFTIEVERALRVLDGAILVFCSVGGVQSQSITVDRQMKRYEVPRLAFINKLDRMGADPWKVLNQARSKLRHHSAAIQVPIGLEEGFKGLVDLVKLKAYYFDGPNGEKLTIKEVPSDMEALVAEKRHELIETVSEVDDILAEAFLSDEPISDVDLEGAIRRATVARKFIPVFMGSAFKNKGIQPLLDGVLSYLPCPIEVNNYALDQSKKEEKVELPGNPDGPLVALAFKLEESKFGQLTYLRIYEGVIRKGDFIINVNTGKKNKVPRLGRMHSNEMEEIDEAHAGQIVAVFGVDCASGDTFTDGSVKYTMTSMSVPEPVMSLAVQPVSKDSGGQFSKALNRFQREDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDATVGKPRVNFRETVTQRADFDYLHKKQSGGQGQYGRVIGYIEPLPAGSETKFEFENMLVGQAIPSNFFAAIEKGFIEAANSGSLIGHPVENLRVVLTDGAAHAVDSSELAFKMASIYAFRQCYAASRPTILEPVMLVELKVPNEFQGAVAGDLNKRKGMIVGNDQDGDDSVIIAHVPLNNMFGYSTALRSMTQGKGEFTMEYKEHSPVSHDVQTQLVNAYKGNKAPE