AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene36181

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36181.t1 MTR_7g444860 91.720 314 26 0 1 314 1 314 0.0 562
MS.gene36181.t1 MTR_3g085180 54.676 139 56 3 98 233 115 249 3.83e-40 145
MS.gene36181.t1 MTR_4g088555 64.211 95 34 0 135 229 49 143 1.42e-36 128
MS.gene36181.t1 MTR_1g053715 53.077 130 55 2 104 227 23 152 1.44e-35 132
MS.gene36181.t1 MTR_2g078770 58.182 110 45 1 126 235 36 144 1.51e-35 127
MS.gene36181.t1 MTR_2g014200 68.889 90 27 1 135 224 51 139 1.76e-35 125
MS.gene36181.t1 MTR_8g463140 68.235 85 27 0 149 233 65 149 7.04e-35 125
MS.gene36181.t1 MTR_7g110320 60.000 110 43 1 125 233 120 229 1.41e-34 133
MS.gene36181.t1 MTR_5g046670 73.077 78 21 0 149 226 244 321 1.67e-34 131
MS.gene36181.t1 MTR_7g110320 60.000 110 43 1 125 233 120 229 1.93e-34 133
MS.gene36181.t1 MTR_3g099080 55.000 100 45 0 131 230 80 179 2.66e-34 129
MS.gene36181.t1 MTR_8g005960 67.857 84 27 0 142 225 180 263 3.37e-34 127
MS.gene36181.t1 MTR_7g092930 51.145 131 58 2 104 228 17 147 3.56e-34 127
MS.gene36181.t1 MTR_4g109770 70.000 80 24 0 143 222 117 196 4.04e-34 130
MS.gene36181.t1 MTR_2g461920 60.377 106 36 2 143 248 165 264 5.24e-34 130
MS.gene36181.t1 MTR_2g046550 51.938 129 51 3 119 243 116 237 3.66e-32 126
MS.gene36181.t1 MTR_8g096780 55.556 99 44 0 135 233 85 183 4.47e-32 123
MS.gene36181.t1 MTR_1g086250 58.947 95 39 0 134 228 132 226 8.33e-31 122
MS.gene36181.t1 MTR_7g028740 65.000 80 28 0 149 228 77 156 1.01e-30 119
MS.gene36181.t1 MTR_8g080670 48.092 131 48 3 99 221 116 234 6.40e-30 117
MS.gene36181.t1 MTR_8g080680 38.983 177 72 5 87 240 58 221 2.52e-29 115
MS.gene36181.t1 MTR_1g035010 66.667 81 27 0 149 229 104 184 3.48e-29 118
MS.gene36181.t1 MTR_8g080690 46.923 130 60 3 98 222 99 224 3.49e-29 115
MS.gene36181.t1 MTR_2g020620 56.061 66 29 0 162 227 103 168 1.40e-16 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene36181.t1 AT1G27370 54.839 124 52 1 103 222 126 249 1.11e-37 137
MS.gene36181.t1 AT1G27370 54.839 124 52 1 103 222 126 249 3.23e-37 137
MS.gene36181.t1 AT1G27370 54.839 124 52 1 103 222 126 249 3.23e-37 137
MS.gene36181.t1 AT1G27370 54.839 124 52 1 103 222 126 249 3.23e-37 137
MS.gene36181.t1 AT1G27370 54.839 124 52 1 103 222 126 249 3.23e-37 137
MS.gene36181.t1 AT1G27370 54.839 124 52 1 103 222 126 249 3.23e-37 137
MS.gene36181.t1 AT1G27370 54.839 124 52 1 103 222 126 249 3.23e-37 137
MS.gene36181.t1 AT1G27360 55.556 126 47 2 103 222 126 248 1.16e-36 135
MS.gene36181.t1 AT1G27360 55.556 126 47 2 103 222 126 248 1.16e-36 135
MS.gene36181.t1 AT1G27360 55.556 126 47 2 103 222 126 248 1.16e-36 135
MS.gene36181.t1 AT1G27360 55.556 126 47 2 103 222 126 248 1.16e-36 135
MS.gene36181.t1 AT3G15270 61.458 96 37 0 149 244 63 158 1.93e-35 127
MS.gene36181.t1 AT2G33810 69.231 78 24 0 149 226 54 131 1.96e-35 125
MS.gene36181.t1 AT5G43270 52.672 131 53 3 98 222 115 242 7.46e-35 131
MS.gene36181.t1 AT5G43270 52.672 131 53 3 98 222 115 242 7.46e-35 131
MS.gene36181.t1 AT5G43270 52.672 131 53 3 98 222 115 242 7.46e-35 131
MS.gene36181.t1 AT3G60030 59.615 104 41 1 131 233 108 211 6.30e-34 132
MS.gene36181.t1 AT3G57920 55.462 119 40 2 104 222 27 132 8.49e-34 127
MS.gene36181.t1 AT2G42200 63.736 91 33 0 146 236 71 161 9.36e-34 127
MS.gene36181.t1 AT1G02065 52.066 121 48 2 104 222 149 261 9.75e-34 126
MS.gene36181.t1 AT1G53160 70.000 80 24 0 149 228 54 133 1.14e-33 122
MS.gene36181.t1 AT1G53160 70.000 80 24 0 149 228 54 133 1.47e-33 121
MS.gene36181.t1 AT1G53160 70.000 80 24 0 149 228 54 133 1.47e-33 121
MS.gene36181.t1 AT1G69170 74.324 74 19 0 149 222 124 197 2.65e-32 124
MS.gene36181.t1 AT5G50670 57.303 89 38 0 142 230 94 182 3.49e-31 120
MS.gene36181.t1 AT5G50670 57.303 89 38 0 142 230 94 182 3.49e-31 120
MS.gene36181.t1 AT5G50570 57.303 89 38 0 142 230 94 182 3.49e-31 120
MS.gene36181.t1 AT5G50570 57.303 89 38 0 142 230 94 182 3.49e-31 120
MS.gene36181.t1 AT1G76580 66.667 81 27 0 148 228 113 193 5.89e-31 123
MS.gene36181.t1 AT1G76580 66.667 81 27 0 148 228 113 193 6.17e-31 123
MS.gene36181.t1 AT1G76580 66.667 81 27 0 148 228 113 193 1.10e-30 122
MS.gene36181.t1 AT1G20980 70.130 77 23 0 149 225 120 196 1.54e-30 122
MS.gene36181.t1 AT2G47070 68.000 75 24 0 149 223 106 180 3.91e-29 117
MS.gene36181.t1 AT1G02065 45.192 104 45 3 104 203 149 244 1.31e-19 86.7
MS.gene36181.t1 AT5G18830 44.000 100 55 1 135 234 125 223 3.41e-19 88.6
MS.gene36181.t1 AT5G18830 44.000 100 55 1 135 234 125 223 3.42e-19 88.6
MS.gene36181.t1 AT5G18830 44.000 100 55 1 135 234 125 223 3.72e-19 88.6
MS.gene36181.t1 AT2G47070 70.588 51 15 0 173 223 1 51 2.99e-17 82.8

Find 98 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACCCAACACCACAACTTT+TGG 0.295801 7.1:-55277628 None:intergenic
CATATGTTGTGGGAAATAAT+TGG 0.328845 7.1:-55280978 None:intergenic
TGTCATCTCGGACTGATTCA+TGG 0.336380 7.1:+55280798 MS.gene36181:CDS
TGGGAAGACAGCGGCGGTGG+CGG 0.341039 7.1:+55277495 MS.gene36181:CDS
CACCTCACATGTTTGAAGTT+GGG 0.387603 7.1:+55277394 MS.gene36181:CDS
GGCGGTGGCGGGTGGTTATA+CGG 0.390243 7.1:+55277507 MS.gene36181:CDS
GGAGGATATTGTGGTGGTGG+TGG 0.392988 7.1:+55277475 MS.gene36181:CDS
GGGAAGACAGCGGCGGTGGC+GGG 0.398799 7.1:+55277496 MS.gene36181:CDS
AAAAGTTGTGGTGTTGGGTT+TGG 0.400118 7.1:+55277630 MS.gene36181:CDS
ATTCAAAGAGAAGTTGTAGA+AGG 0.402392 7.1:+55279967 MS.gene36181:CDS
CGTCGCTTTCGTTCTGAGGC+AGG 0.422225 7.1:-55277309 None:intergenic
TAATGCAGCGCTGCATCTTA+CGG 0.427164 7.1:-55280840 None:intergenic
GCACCAAAAGTTGTGGTGTT+GGG 0.429036 7.1:+55277625 MS.gene36181:CDS
AGAAAACCGAGCATCGATAA+TGG 0.432077 7.1:+55280877 MS.gene36181:CDS
TGGTGGGAAGACAGCGGCGG+TGG 0.440732 7.1:+55277492 MS.gene36181:CDS
AAACATGTGAGGTGTGGATC+AGG 0.445259 7.1:-55277385 None:intergenic
CTTTCTCTCTTCTGTCATCT+CGG 0.450629 7.1:+55280786 MS.gene36181:CDS
ATACGGTGGAGGTGTGTCTC+GGG 0.452355 7.1:+55277351 MS.gene36181:CDS
ACACCTCACATGTTTGAAGT+TGG 0.453165 7.1:+55277393 MS.gene36181:CDS
CGTTATTGTTAGTATTACTT+TGG 0.461547 7.1:-55277138 None:intergenic
CATACGGTGGAGGTGTGTCT+CGG 0.463683 7.1:+55277350 MS.gene36181:CDS
ATATAAACAAACATGGACTT+TGG 0.464767 7.1:+55277085 None:intergenic
GATGTGAGTGGTGGGTTGGC+GGG 0.465600 7.1:+55277436 MS.gene36181:CDS
TAGCTAGACCTGCCTCGTTA+CGG 0.470096 7.1:-55277273 None:intergenic
GCCTAGCCATTATCGATGCT+CGG 0.471586 7.1:-55280883 None:intergenic
AGATGTGAGTGGTGGGTTGG+CGG 0.473094 7.1:+55277435 MS.gene36181:CDS
GGAAATAATTGGACTCGGAT+TGG 0.474080 7.1:-55280967 None:intergenic
GATTCTGTCAACAGTGTAGC+AGG 0.478919 7.1:+55277659 MS.gene36181:CDS
GGCACCAAAAGTTGTGGTGT+TGG 0.478965 7.1:+55277624 MS.gene36181:CDS
AATTCCTCCCAACAGAATCA+TGG 0.485519 7.1:-55280028 None:intergenic
GAATACTTTCAATGTTAATG+AGG 0.490457 7.1:+55277225 MS.gene36181:CDS
ACCTGCCTCGTTACGGTTGG+CGG 0.491349 7.1:-55277266 None:intergenic
ACCTCACATGTTTGAAGTTG+GGG 0.495007 7.1:+55277395 MS.gene36181:CDS
GGTTGGCGGGTGAGAAGAAA+GGG 0.501909 7.1:+55277449 MS.gene36181:CDS
GCCGCCAACCGTAACGAGGC+AGG 0.504436 7.1:+55277265 MS.gene36181:CDS
GGGTTGGCGGGTGAGAAGAA+AGG 0.504444 7.1:+55277448 MS.gene36181:CDS
AAGACAGCGGCGGTGGCGGG+TGG 0.504493 7.1:+55277499 MS.gene36181:CDS
TGAATGCTAAGGAGTATCAT+AGG 0.506629 7.1:+55277572 MS.gene36181:CDS
GGAGTATCATAGGAGACATA+AGG 0.511196 7.1:+55277582 MS.gene36181:CDS
AGTTGTAGAAGGAGACTGGC+TGG 0.513272 7.1:+55279978 MS.gene36181:CDS
GACTGATTCATGGCTTTCAC+CGG 0.514906 7.1:+55280808 MS.gene36181:CDS
GGTTTGTGAGATTCATTCAA+AGG 0.515124 7.1:+55277603 MS.gene36181:CDS
CGTCCGTCGCTTTCGTTCTG+AGG 0.517597 7.1:-55277313 None:intergenic
GTGACAAGATGTCAGGTGGA+TGG 0.517621 7.1:+55277532 MS.gene36181:CDS
GAGGATATTGTGGTGGTGGT+GGG 0.521993 7.1:+55277476 MS.gene36181:CDS
CATCTTACGGAGAGGTCAGC+CGG 0.525498 7.1:-55280827 None:intergenic
AGAGCTCCCATGATTCTGTT+GGG 0.525869 7.1:+55280021 MS.gene36181:CDS
GATCTCCTTGTAGTCTTCCA+CGG 0.529276 7.1:-55280945 None:intergenic
GAGAAGTTGTAGAAGGAGAC+TGG 0.529685 7.1:+55279974 MS.gene36181:CDS
AAGAGCTCCCATGATTCTGT+TGG 0.535482 7.1:+55280020 MS.gene36181:CDS
TAAACAAACATGGACTTTGG+AGG 0.536667 7.1:+55277088 None:intergenic
TGAAGATGTGAGTGGTGGGT+TGG 0.539538 7.1:+55277432 MS.gene36181:CDS
CAAAGTAATACTAACAATAA+CGG 0.540380 7.1:+55277139 MS.gene36181:CDS
TACGGCGGTGACAAGATGTC+AGG 0.542371 7.1:+55277525 MS.gene36181:CDS
AAAGGAGGATATTGTGGTGG+TGG 0.543034 7.1:+55277472 MS.gene36181:CDS
CATCAAATTCTGACACAACA+TGG 0.543897 7.1:-55279944 None:intergenic
TTGTGGGAAATAATTGGACT+CGG 0.550675 7.1:-55280972 None:intergenic
AAAGGGAAAGGAGGATATTG+TGG 0.551862 7.1:+55277466 MS.gene36181:CDS
TGCCTCGTTACGGTTGGCGG+CGG 0.558232 7.1:-55277263 None:intergenic
GGTGAGAAGAAAGGGAAAGG+AGG 0.558277 7.1:+55277457 MS.gene36181:CDS
AACAATAACGGTAACAGTAA+CGG 0.559154 7.1:+55277151 MS.gene36181:CDS
ATTCCTCCCAACAGAATCAT+GGG 0.563033 7.1:-55280027 None:intergenic
CGACAGTATCGGAGTGCATA+CGG 0.565269 7.1:+55277334 MS.gene36181:CDS
TTCAAAGGCACCAAAAGTTG+TGG 0.566183 7.1:+55277618 MS.gene36181:CDS
AATACGTCTCAGACAGAGAC+TGG 0.567151 7.1:+55280906 MS.gene36181:CDS
TATCGGAGTGCATACGGTGG+AGG 0.569830 7.1:+55277340 MS.gene36181:CDS
CCTTGTAGTCTTCCACGGCA+TGG 0.578162 7.1:-55280940 None:intergenic
TGACAAGATGTCAGGTGGAT+GGG 0.580510 7.1:+55277533 MS.gene36181:CDS
GCGGGTGAGAAGAAAGGGAA+AGG 0.581136 7.1:+55277454 MS.gene36181:CDS
AAACAAACATGGACTTTGGA+GGG 0.586271 7.1:+55277089 None:intergenic
TACGGTGGAGGTGTGTCTCG+GGG 0.588358 7.1:+55277352 MS.gene36181:CDS
CCATGCCGTGGAAGACTACA+AGG 0.590047 7.1:+55280940 MS.gene36181:CDS
CGTGGCATTGATGAATGCTA+AGG 0.590898 7.1:+55277561 MS.gene36181:CDS
AACTTCAAACATGTGAGGTG+TGG 0.592893 7.1:-55277391 None:intergenic
AAACACAATCTTGCCTTGTG+AGG 0.598676 7.1:-55280051 None:intergenic
CTCCGCCGCCAACCGTAACG+AGG 0.600437 7.1:+55277261 MS.gene36181:CDS
AAAGCGACGGACGACAGTAT+CGG 0.601886 7.1:+55277323 MS.gene36181:CDS
TCTGCGGAAACATATGTTGT+GGG 0.616543 7.1:-55280988 None:intergenic
ACCGAGCATCGATAATGGCT+AGG 0.618479 7.1:+55280882 MS.gene36181:CDS
GTTGTAGAAGGAGACTGGCT+GGG 0.618724 7.1:+55279979 MS.gene36181:CDS
AGTAGTGGTAGTGCTACTAC+TGG 0.619066 7.1:+55277187 MS.gene36181:CDS
GCATTTGCAGCACCATGCCG+TGG 0.620143 7.1:+55280928 MS.gene36181:CDS
TGGTGGTGGTGGGAAGACAG+CGG 0.624238 7.1:+55277486 MS.gene36181:CDS
TAGACCTGCCTCGTTACGGT+TGG 0.627426 7.1:-55277269 None:intergenic
AACCATCACTAATGTGTCTG+CGG 0.630280 7.1:-55281004 None:intergenic
GGCGGTGACAAGATGTCAGG+TGG 0.634393 7.1:+55277528 MS.gene36181:CDS
GTTGGGAGGAATTCCTCACA+AGG 0.635637 7.1:+55280038 MS.gene36181:CDS
TCCCCAACTTCAAACATGTG+AGG 0.641757 7.1:-55277396 None:intergenic
GGGAAAGGAGGATATTGTGG+TGG 0.654744 7.1:+55277469 MS.gene36181:CDS
GTGCTACTACTGGTACTGCA+TGG 0.661002 7.1:+55277197 MS.gene36181:CDS
TGGTGGTGGGAAGACAGCGG+CGG 0.665996 7.1:+55277489 MS.gene36181:CDS
GTCTGCGGAAACATATGTTG+TGG 0.669116 7.1:-55280989 None:intergenic
GCTCCCATGATTCTGTTGGG+AGG 0.673767 7.1:+55280024 MS.gene36181:CDS
CAGCGCTGCATCTTACGGAG+AGG 0.691330 7.1:-55280835 None:intergenic
CTGCCTCAGAACGAAAGCGA+CGG 0.700601 7.1:+55277310 MS.gene36181:CDS
TCAGGTGGATGGGTGTAACG+TGG 0.711182 7.1:+55277543 MS.gene36181:CDS
CAGTATCGGAGTGCATACGG+TGG 0.746660 7.1:+55277337 MS.gene36181:CDS
GGTGGCGGGTGGTTATACGG+CGG 0.748709 7.1:+55277510 MS.gene36181:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGATATATATGATTTATA+AGG + chr7.1:55280555-55280574 MS.gene36181:intron 10.0%
!! AATATAATATATAATAGTCT+CGG - chr7.1:55277812-55277831 None:intergenic 10.0%
!! CTATCAATTAAAAAAAAAAA+AGG + chr7.1:55279476-55279495 MS.gene36181:intron 10.0%
!! TTATCAATAGATATTAAAAA+AGG + chr7.1:55278661-55278680 MS.gene36181:intron 10.0%
!!! AAATATTCATTTTTTTTATC+AGG + chr7.1:55278076-55278095 MS.gene36181:intron 10.0%
!!! GTTTTTAATTTTATGTTTTA+GGG + chr7.1:55279853-55279872 MS.gene36181:intron 10.0%
!! AAAAATATGTAACTATTACT+AGG + chr7.1:55279647-55279666 MS.gene36181:intron 15.0%
!! AATAAAAAATAATACTCCTT+CGG - chr7.1:55279815-55279834 None:intergenic 15.0%
!! ACTATTGCAAAATAAAAATT+TGG + chr7.1:55278877-55278896 MS.gene36181:intron 15.0%
!! AGATATTAAAAAAGGATATT+AGG + chr7.1:55278669-55278688 MS.gene36181:intron 15.0%
!! ATAATATTTACTGCTAAATT+TGG - chr7.1:55277921-55277940 None:intergenic 15.0%
!! ATATTAAAAAAGGATATTAG+GGG + chr7.1:55278671-55278690 MS.gene36181:intron 15.0%
!! GATAATTAATATGAAAAATG+TGG + chr7.1:55279897-55279916 MS.gene36181:intron 15.0%
!! GATATTAAAAAAGGATATTA+GGG + chr7.1:55278670-55278689 MS.gene36181:intron 15.0%
!! TCTATTGATAAAATAATATG+AGG - chr7.1:55278652-55278671 None:intergenic 15.0%
!! TTCAAAAAAAGTAAATTTCA+TGG - chr7.1:55280137-55280156 None:intergenic 15.0%
!!! AAAAGAGTATCTTATATTTA+TGG + chr7.1:55279752-55279771 MS.gene36181:intron 15.0%
!!! GGTTTTTAATTTTATGTTTT+AGG + chr7.1:55279852-55279871 MS.gene36181:intron 15.0%
!!! TACTTTTTTACATGTAAAAT+AGG + chr7.1:55278764-55278783 MS.gene36181:intron 15.0%
!!! TATTTTACATGTAAAAAAGT+AGG - chr7.1:55278765-55278784 None:intergenic 15.0%
!!! TATTTTTTTAATAAAAAGCG+AGG + chr7.1:55277732-55277751 MS.gene36181:intron 15.0%
!! AATGTACATATATTTACCTT+TGG + chr7.1:55278427-55278446 MS.gene36181:intron 20.0%
!! ATTAATATACATGCAGATAT+TGG - chr7.1:55279231-55279250 None:intergenic 20.0%
!! CAAAGTAATACTAACAATAA+CGG + chr7.1:55277139-55277158 MS.gene36181:CDS 20.0%
!! GAGTAATTTACAAAAAATCA+CGG + chr7.1:55279587-55279606 MS.gene36181:intron 20.0%
!! GTAAATTACTCTTATACTAA+GGG - chr7.1:55279578-55279597 None:intergenic 20.0%
!! GTTCATACTAAAACATATAT+TGG - chr7.1:55277868-55277887 None:intergenic 20.0%
!! TACTAAGTAGATAAACAAAA+TGG - chr7.1:55280640-55280659 None:intergenic 20.0%
!! TCTTTAAATGTAATATGTTG+TGG - chr7.1:55280540-55280559 None:intergenic 20.0%
!! TGATTGCATTTATACATAAA+GGG - chr7.1:55279676-55279695 None:intergenic 20.0%
!! TGTAAATTACTCTTATACTA+AGG - chr7.1:55279579-55279598 None:intergenic 20.0%
!! TTATAAAAAAACGTGTTTGT+GGG - chr7.1:55279127-55279146 None:intergenic 20.0%
!! TTGATTGCATTTATACATAA+AGG - chr7.1:55279677-55279696 None:intergenic 20.0%
!! TTTATAAAAAAACGTGTTTG+TGG - chr7.1:55279128-55279147 None:intergenic 20.0%
!!! AAAAAAGGTATTGATTTTAG+AGG + chr7.1:55279491-55279510 MS.gene36181:intron 20.0%
!!! ACAATTGATAGTATTAGTAA+GGG + chr7.1:55279718-55279737 MS.gene36181:intron 20.0%
!!! GATATATTTTGTAGTTGTAT+AGG - chr7.1:55279326-55279345 None:intergenic 20.0%
!!! GGATTTTCAAATATAAACTA+CGG + chr7.1:55278541-55278560 MS.gene36181:intron 20.0%
!!! TTATTTATTTTCAATGCATG+AGG - chr7.1:55280259-55280278 None:intergenic 20.0%
!!! TTTTTTATCAGGTAATTTAG+TGG + chr7.1:55278087-55278106 MS.gene36181:intron 20.0%
! AATATGAAAAATGTGGTTGT+GGG + chr7.1:55279904-55279923 MS.gene36181:intron 25.0%
! AATTGTTATCAACAGTTAGT+TGG - chr7.1:55278959-55278978 None:intergenic 25.0%
! ACTAAAGATAAACAAATTCG+CGG + chr7.1:55280437-55280456 MS.gene36181:intron 25.0%
! ACTAATACTATCAATTGTCT+TGG - chr7.1:55279716-55279735 None:intergenic 25.0%
! ATAAACAAAATGGAAAACCT+TGG - chr7.1:55280630-55280649 None:intergenic 25.0%
! ATCTGCATGTATATTAATAG+TGG + chr7.1:55279233-55279252 MS.gene36181:intron 25.0%
! CGTTATTGTTAGTATTACTT+TGG - chr7.1:55277141-55277160 None:intergenic 25.0%
! GAATACTTTCAATGTTAATG+AGG + chr7.1:55277225-55277244 MS.gene36181:CDS 25.0%
! GTAAAAAAGTAGGATATCTT+GGG - chr7.1:55278755-55278774 None:intergenic 25.0%
! TAAACAAAATGGAAAACCTT+GGG - chr7.1:55280629-55280648 None:intergenic 25.0%
! TAATATGAAAAATGTGGTTG+TGG + chr7.1:55279903-55279922 MS.gene36181:intron 25.0%
! TGCATAATATATGTAGGAAT+CGG + chr7.1:55278721-55278740 MS.gene36181:intron 25.0%
! TGTAAAAAAGTAGGATATCT+TGG - chr7.1:55278756-55278775 None:intergenic 25.0%
! TTAAACCCAACAAATGTATT+TGG + chr7.1:55278481-55278500 MS.gene36181:intron 25.0%
! TTGGATCTATTTGAATTTAG+TGG - chr7.1:55278940-55278959 None:intergenic 25.0%
!! CAATTGATAGTATTAGTAAG+GGG + chr7.1:55279719-55279738 MS.gene36181:intron 25.0%
!! GACAATTGATAGTATTAGTA+AGG + chr7.1:55279717-55279736 MS.gene36181:intron 25.0%
!! TTAGGTTTTTGAATTCTCTT+GGG - chr7.1:55279026-55279045 None:intergenic 25.0%
!! TTATTTGAGCTTGTTCTTTA+TGG - chr7.1:55279075-55279094 None:intergenic 25.0%
!! TTTTAATAAAAAGCGAGGTA+GGG + chr7.1:55277737-55277756 MS.gene36181:intron 25.0%
!! TTTTTAATAAAAAGCGAGGT+AGG + chr7.1:55277736-55277755 MS.gene36181:intron 25.0%
!!! ATAAGAGTACACGATTTTTT+TGG + chr7.1:55280275-55280294 MS.gene36181:intron 25.0%
!!! GACAAACATTTTTTTGCAAA+TGG + chr7.1:55279774-55279793 MS.gene36181:intron 25.0%
!!! GTGTCTTAGATTTGTTATTT+TGG - chr7.1:55280396-55280415 None:intergenic 25.0%
!!! GTTTTTTGTTTCTTGTAATC+AGG + chr7.1:55280755-55280774 MS.gene36181:intron 25.0%
!!! TGCAAATGGTCTTATAATTA+AGG + chr7.1:55279788-55279807 MS.gene36181:intron 25.0%
!!! TTTAGGTTTTTGAATTCTCT+TGG - chr7.1:55279027-55279046 None:intergenic 25.0%
AAAAGATGCACTTTCAATAG+CGG - chr7.1:55279152-55279171 None:intergenic 30.0%
AACAATAACGGTAACAGTAA+CGG + chr7.1:55277151-55277170 MS.gene36181:CDS 30.0%
AATATATGTACATTCTCTGC+AGG - chr7.1:55278421-55278440 None:intergenic 30.0%
ACATGCATAATTATATGCAG+AGG - chr7.1:55278169-55278188 None:intergenic 30.0%
ACCAACGAAAAACATATTCA+AGG + chr7.1:55280468-55280487 MS.gene36181:intron 30.0%
ATAATTATATGCAGAGGTTG+GGG - chr7.1:55278163-55278182 None:intergenic 30.0%
ATATGAAAAATGTGGTTGTG+GGG + chr7.1:55279905-55279924 MS.gene36181:intron 30.0%
ATCTTCAGTTTGTAACTTGA+TGG + chr7.1:55280369-55280388 MS.gene36181:intron 30.0%
ATTACTCTTATACTAAGGGA+CGG - chr7.1:55279574-55279593 None:intergenic 30.0%
ATTCAAAGAGAAGTTGTAGA+AGG + chr7.1:55279967-55279986 MS.gene36181:CDS 30.0%
CAACAAATGAACTCTTTAGT+TGG + chr7.1:55279441-55279460 MS.gene36181:intron 30.0%
CAACACCAAATACATTTGTT+GGG - chr7.1:55278489-55278508 None:intergenic 30.0%
CAACTAAAGAGTTCATTTGT+TGG - chr7.1:55279443-55279462 None:intergenic 30.0%
CATAATTATATGCAGAGGTT+GGG - chr7.1:55278164-55278183 None:intergenic 30.0%
CATAGTAGACAATATGTTGA+TGG + chr7.1:55280726-55280745 MS.gene36181:intron 30.0%
CATATGTTGTGGGAAATAAT+TGG - chr7.1:55280981-55281000 None:intergenic 30.0%
CATTCACTAAGATTAAGATC+CGG - chr7.1:55279280-55279299 None:intergenic 30.0%
GGACATTGCATAATATATGT+AGG + chr7.1:55278715-55278734 MS.gene36181:intron 30.0%
TAAATATTCACCTTCCATCT+CGG + chr7.1:55279043-55279062 MS.gene36181:intron 30.0%
TACAATTGCATTGAATGTCA+TGG - chr7.1:55280170-55280189 None:intergenic 30.0%
TATTTGCACACAATGTTGTA+TGG + chr7.1:55279831-55279850 MS.gene36181:intron 30.0%
TGTTGTGGAAATTTCATTCT+AGG - chr7.1:55280525-55280544 None:intergenic 30.0%
TTGATCTATGCTTGATTGTT+GGG + chr7.1:55278268-55278287 MS.gene36181:intron 30.0%
TTGTTAGAGATAGGTTAAGA+AGG - chr7.1:55278857-55278876 None:intergenic 30.0%
TTTGATCTATGCTTGATTGT+TGG + chr7.1:55278267-55278286 MS.gene36181:intron 30.0%
! ACATTTGTTGGGTTTAAAGA+GGG - chr7.1:55278478-55278497 None:intergenic 30.0%
! CAAAGGTGTAAAAGTTATGT+GGG + chr7.1:55279521-55279540 MS.gene36181:intron 30.0%
! CAGTTACAACGATCATTTTA+AGG - chr7.1:55278240-55278259 None:intergenic 30.0%
! CATATATTTACCTTTGGTGT+TGG + chr7.1:55278433-55278452 MS.gene36181:intron 30.0%
! GTATTAGTAAGGGGTATAAT+TGG + chr7.1:55279728-55279747 MS.gene36181:intron 30.0%
! TACATTTGTTGGGTTTAAAG+AGG - chr7.1:55278479-55278498 None:intergenic 30.0%
! TAGTTGTATAGGCTTCTTTT+TGG - chr7.1:55279315-55279334 None:intergenic 30.0%
! TCAAAGGTGTAAAAGTTATG+TGG + chr7.1:55279520-55279539 MS.gene36181:intron 30.0%
! TTTGTTTCTTGTAATCAGGT+GGG + chr7.1:55280759-55280778 MS.gene36181:intron 30.0%
!! GATAGAATTCACCTTTTTCA+AGG + chr7.1:55278109-55278128 MS.gene36181:intron 30.0%
!! TGCAATAGTTTGTTAGAGAT+AGG - chr7.1:55278866-55278885 None:intergenic 30.0%
!! TTTTGTTTCTTGTAATCAGG+TGG + chr7.1:55280758-55280777 MS.gene36181:intron 30.0%
!!! ACTTGACTTTTTTCCAATAG+CGG - chr7.1:55279104-55279123 None:intergenic 30.0%
!!! CATTATTTTGAAGATGTGAG+TGG + chr7.1:55277424-55277443 MS.gene36181:CDS 30.0%
!!! CTTTTTCAAGGTGAATAAGT+GGG + chr7.1:55278121-55278140 MS.gene36181:intron 30.0%
!!! TTTTTCAAGGTGAATAAGTG+GGG + chr7.1:55278122-55278141 MS.gene36181:intron 30.0%
AAAAGGATATTAGGGGTTTC+TGG + chr7.1:55278678-55278697 MS.gene36181:intron 35.0%
AAAGGATATTAGGGGTTTCT+GGG + chr7.1:55278679-55278698 MS.gene36181:intron 35.0%
AATGGTTTAGACGACAAAAG+TGG + chr7.1:55278520-55278539 MS.gene36181:intron 35.0%
CAAATAAACACATCCGCTAT+TGG + chr7.1:55279088-55279107 MS.gene36181:intron 35.0%
CATCAAATTCTGACACAACA+TGG - chr7.1:55279947-55279966 None:intergenic 35.0%
CCAACACCAAATACATTTGT+TGG - chr7.1:55278490-55278509 None:intergenic 35.0%
CCACTTATTCACCTTGAAAA+AGG - chr7.1:55278123-55278142 None:intergenic 35.0%
CGACAATTATATGCAGAGAT+CGG - chr7.1:55277780-55277799 None:intergenic 35.0%
CGGATATTAAGAATAGTTGC+TGG + chr7.1:55279607-55279626 MS.gene36181:intron 35.0%
GACAATTATATGCAGAGATC+GGG - chr7.1:55277779-55277798 None:intergenic 35.0%
GAGATGGAAGGTGAATATTT+AGG - chr7.1:55279044-55279063 None:intergenic 35.0%
GCATAATTATATGCAGAGGT+TGG - chr7.1:55278165-55278184 None:intergenic 35.0%
GGTTTGTGAGATTCATTCAA+AGG + chr7.1:55277603-55277622 MS.gene36181:CDS 35.0%
GTCTTATAATTAAGGACCGA+AGG + chr7.1:55279796-55279815 MS.gene36181:intron 35.0%
TTGTGGGAAATAATTGGACT+CGG - chr7.1:55280975-55280994 None:intergenic 35.0%
! ATGTAAATTTGAGACGTTCG+AGG - chr7.1:55280333-55280352 None:intergenic 35.0%
! GCCTTGAATATGTTTTTCGT+TGG - chr7.1:55280472-55280491 None:intergenic 35.0%
! GTAACAGTAACGGTTTTACT+TGG + chr7.1:55277161-55277180 MS.gene36181:CDS 35.0%
! GTTTTTGAATTCTCTTGGGA+GGG - chr7.1:55279022-55279041 None:intergenic 35.0%
! TTGATTGTTGGGTTTGAGTT+TGG + chr7.1:55278279-55278298 MS.gene36181:intron 35.0%
!! ATATTTACCTTTGGTGTTGG+AGG + chr7.1:55278436-55278455 MS.gene36181:intron 35.0%
!! ATTTTGAAGATGTGAGTGGT+GGG + chr7.1:55277428-55277447 MS.gene36181:CDS 35.0%
!! CAAATGTATTTGGTGTTGGT+TGG + chr7.1:55278491-55278510 MS.gene36181:intron 35.0%
!! CCAACAAATGTATTTGGTGT+TGG + chr7.1:55278487-55278506 MS.gene36181:intron 35.0%
!! GGTGTTGGTTGGAATAATAA+TGG + chr7.1:55278502-55278521 MS.gene36181:intron 35.0%
!! GTAGACAATATGTTGATGGT+TGG + chr7.1:55280730-55280749 MS.gene36181:intron 35.0%
!! TATTTACCTTTGGTGTTGGA+GGG + chr7.1:55278437-55278456 MS.gene36181:intron 35.0%
!! TATTTTGAAGATGTGAGTGG+TGG + chr7.1:55277427-55277446 MS.gene36181:CDS 35.0%
!! TGAATGCTAAGGAGTATCAT+AGG + chr7.1:55277572-55277591 MS.gene36181:CDS 35.0%
!!! CCTTTTTCAAGGTGAATAAG+TGG + chr7.1:55278120-55278139 MS.gene36181:intron 35.0%
AAACACAATCTTGCCTTGTG+AGG - chr7.1:55280054-55280073 None:intergenic 40.0%
AAAGGGAAAGGAGGATATTG+TGG + chr7.1:55277466-55277485 MS.gene36181:CDS 40.0%
AAATGCATTCAAACGACCCA+AGG + chr7.1:55280610-55280629 MS.gene36181:intron 40.0%
AACTTCAAACATGTGAGGTG+TGG - chr7.1:55277394-55277413 None:intergenic 40.0%
AATTCCTCCCAACAGAATCA+TGG - chr7.1:55280031-55280050 None:intergenic 40.0%
ATTCCTCCCAACAGAATCAT+GGG - chr7.1:55280030-55280049 None:intergenic 40.0%
CCAAGATGATTCACACAATC+CGG + chr7.1:55279258-55279277 MS.gene36181:intron 40.0%
CTTTCTCTCTTCTGTCATCT+CGG + chr7.1:55280786-55280805 MS.gene36181:CDS 40.0%
GAATATTATCAATCCCCACG+AGG - chr7.1:55278209-55278228 None:intergenic 40.0%
GGAAATAATTGGACTCGGAT+TGG - chr7.1:55280970-55280989 None:intergenic 40.0%
TCTGCGGAAACATATGTTGT+GGG - chr7.1:55280991-55281010 None:intergenic 40.0%
! AAAAGTTGTGGTGTTGGGTT+TGG + chr7.1:55277630-55277649 MS.gene36181:CDS 40.0%
! AAACCCAACACCACAACTTT+TGG - chr7.1:55277631-55277650 None:intergenic 40.0%
! AACTTTTACACCTTTGACCC+AGG - chr7.1:55279517-55279536 None:intergenic 40.0%
! ACACCTCACATGTTTGAAGT+TGG + chr7.1:55277393-55277412 MS.gene36181:CDS 40.0%
! ACCTCACATGTTTGAAGTTG+GGG + chr7.1:55277395-55277414 MS.gene36181:CDS 40.0%
! CACCTCACATGTTTGAAGTT+GGG + chr7.1:55277394-55277413 MS.gene36181:CDS 40.0%
! CTGTCGGTTAAATAGTCTAG+TGG - chr7.1:55278800-55278819 None:intergenic 40.0%
! CTTTATGGACTAATCCGAGA+TGG - chr7.1:55279060-55279079 None:intergenic 40.0%
! GGAGTATCATAGGAGACATA+AGG + chr7.1:55277582-55277601 MS.gene36181:CDS 40.0%
! GGTTTTTGAATTCTCTTGGG+AGG - chr7.1:55279023-55279042 None:intergenic 40.0%
!! AGAAAACCGAGCATCGATAA+TGG + chr7.1:55280877-55280896 MS.gene36181:CDS 40.0%
!! GACAATATGTTGATGGTTGG+TGG + chr7.1:55280733-55280752 MS.gene36181:intron 40.0%
!! TTCAAAGGCACCAAAAGTTG+TGG + chr7.1:55277618-55277637 MS.gene36181:CDS 40.0%
!!! AGGTATTGATTTTAGAGGCC+TGG + chr7.1:55279496-55279515 MS.gene36181:intron 40.0%
!!! GGTATTGATTTTAGAGGCCT+GGG + chr7.1:55279497-55279516 MS.gene36181:intron 40.0%
!!! GGTTTTACTTGGTGTAGTAG+TGG + chr7.1:55277172-55277191 MS.gene36181:CDS 40.0%
AAAAATGTGGTTGTGGGGAC+TGG + chr7.1:55279910-55279929 MS.gene36181:intron 45.0%
AAACATGTGAGGTGTGGATC+AGG - chr7.1:55277388-55277407 None:intergenic 45.0%
AAAGGAGGATATTGTGGTGG+TGG + chr7.1:55277472-55277491 MS.gene36181:CDS 45.0%
AAGAGCTCCCATGATTCTGT+TGG + chr7.1:55280020-55280039 MS.gene36181:CDS 45.0%
AATACGTCTCAGACAGAGAC+TGG + chr7.1:55280906-55280925 MS.gene36181:CDS 45.0%
ACGAGGATAACTCAGTTGAC+AGG - chr7.1:55278192-55278211 None:intergenic 45.0%
ACTCTTATACTAAGGGACGG+AGG - chr7.1:55279571-55279590 None:intergenic 45.0%
AGAGCTCCCATGATTCTGTT+GGG + chr7.1:55280021-55280040 MS.gene36181:CDS 45.0%
ATGTACATTCTCTGCAGGTC+AGG - chr7.1:55278416-55278435 None:intergenic 45.0%
CCGGATTGTGTGAATCATCT+TGG - chr7.1:55279261-55279280 None:intergenic 45.0%
CTCTTATACTAAGGGACGGA+GGG - chr7.1:55279570-55279589 None:intergenic 45.0%
GAGAAGTTGTAGAAGGAGAC+TGG + chr7.1:55279974-55279993 MS.gene36181:CDS 45.0%
GATCTCCTTGTAGTCTTCCA+CGG - chr7.1:55280948-55280967 None:intergenic 45.0%
GATTCTGTCAACAGTGTAGC+AGG + chr7.1:55277659-55277678 MS.gene36181:CDS 45.0%
GCACCAAAAGTTGTGGTGTT+GGG + chr7.1:55277625-55277644 MS.gene36181:CDS 45.0%
GTCAACTGAGTTATCCTCGT+GGG + chr7.1:55278192-55278211 MS.gene36181:intron 45.0%
GTCTGCGGAAACATATGTTG+TGG - chr7.1:55280992-55281011 None:intergenic 45.0%
TAATGCAGCGCTGCATCTTA+CGG - chr7.1:55280843-55280862 None:intergenic 45.0%
TCAACTGAGTTATCCTCGTG+GGG + chr7.1:55278193-55278212 MS.gene36181:intron 45.0%
TCCCCAACTTCAAACATGTG+AGG - chr7.1:55277399-55277418 None:intergenic 45.0%
TGACAAGATGTCAGGTGGAT+GGG + chr7.1:55277533-55277552 MS.gene36181:CDS 45.0%
TGTCAACTGAGTTATCCTCG+TGG + chr7.1:55278191-55278210 MS.gene36181:intron 45.0%
! AGTAGTGGTAGTGCTACTAC+TGG + chr7.1:55277187-55277206 MS.gene36181:CDS 45.0%
! ATGGACTAATCCGAGATGGA+AGG - chr7.1:55279056-55279075 None:intergenic 45.0%
! GACTGATTCATGGCTTTCAC+CGG + chr7.1:55280808-55280827 MS.gene36181:CDS 45.0%
! TGTCATCTCGGACTGATTCA+TGG + chr7.1:55280798-55280817 MS.gene36181:CDS 45.0%
! TTTCTGGGAGCTTAACGACA+GGG + chr7.1:55278694-55278713 MS.gene36181:intron 45.0%
!! ATTTTAGAGGCCTGGGTCAA+AGG + chr7.1:55279504-55279523 MS.gene36181:intron 45.0%
!! CGTGGCATTGATGAATGCTA+AGG + chr7.1:55277561-55277580 MS.gene36181:CDS 45.0%
AAAGCGACGGACGACAGTAT+CGG + chr7.1:55277323-55277342 MS.gene36181:CDS 50.0%
ACACCTGTGCTGTGTGACTA+GGG + chr7.1:55278822-55278841 MS.gene36181:intron 50.0%
AGTTGTAGAAGGAGACTGGC+TGG + chr7.1:55279978-55279997 MS.gene36181:CDS 50.0%
GCCTAGCCATTATCGATGCT+CGG - chr7.1:55280886-55280905 None:intergenic 50.0%
GGCACCAAAAGTTGTGGTGT+TGG + chr7.1:55277624-55277643 MS.gene36181:CDS 50.0%
GGGAAAGGAGGATATTGTGG+TGG + chr7.1:55277469-55277488 MS.gene36181:CDS 50.0%
GGTGAGAAGAAAGGGAAAGG+AGG + chr7.1:55277457-55277476 MS.gene36181:CDS 50.0%
GTGACAAGATGTCAGGTGGA+TGG + chr7.1:55277532-55277551 MS.gene36181:CDS 50.0%
GTTGGGAGGAATTCCTCACA+AGG + chr7.1:55280038-55280057 MS.gene36181:CDS 50.0%
TAGCTAGACCTGCCTCGTTA+CGG - chr7.1:55277276-55277295 None:intergenic 50.0%
TCTACTCCCTCCAACACCAA+AGG - chr7.1:55278446-55278465 None:intergenic 50.0%
! CGACAGTATCGGAGTGCATA+CGG + chr7.1:55277334-55277353 MS.gene36181:CDS 50.0%
! GGTGAATAAGTGGGGTGTCT+AGG + chr7.1:55278130-55278149 MS.gene36181:intron 50.0%
! GTGCTACTACTGGTACTGCA+TGG + chr7.1:55277197-55277216 MS.gene36181:CDS 50.0%
! GTTGTAGAAGGAGACTGGCT+GGG + chr7.1:55279979-55279998 MS.gene36181:CDS 50.0%
! GTTTCTGGGAGCTTAACGAC+AGG + chr7.1:55278693-55278712 MS.gene36181:intron 50.0%
!! ACCGAGCATCGATAATGGCT+AGG + chr7.1:55280882-55280901 MS.gene36181:CDS 50.0%
!! GAGGATATTGTGGTGGTGGT+GGG + chr7.1:55277476-55277495 MS.gene36181:CDS 50.0%
!! TGAAGATGTGAGTGGTGGGT+TGG + chr7.1:55277432-55277451 MS.gene36181:CDS 50.0%
ACTCCCTAGTCACACAGCAC+AGG - chr7.1:55278828-55278847 None:intergenic 55.0%
CATCTTACGGAGAGGTCAGC+CGG - chr7.1:55280830-55280849 None:intergenic 55.0%
CCATGCCGTGGAAGACTACA+AGG + chr7.1:55280940-55280959 MS.gene36181:CDS 55.0%
CCTTGTAGTCTTCCACGGCA+TGG - chr7.1:55280943-55280962 None:intergenic 55.0%
CTGCCTCAGAACGAAAGCGA+CGG + chr7.1:55277310-55277329 MS.gene36181:CDS 55.0%
GACACCTGTGCTGTGTGACT+AGG + chr7.1:55278821-55278840 MS.gene36181:intron 55.0%
GCGGGTGAGAAGAAAGGGAA+AGG + chr7.1:55277454-55277473 MS.gene36181:CDS 55.0%
GCTCCCATGATTCTGTTGGG+AGG + chr7.1:55280024-55280043 MS.gene36181:CDS 55.0%
TACGGCGGTGACAAGATGTC+AGG + chr7.1:55277525-55277544 MS.gene36181:CDS 55.0%
TAGACCTGCCTCGTTACGGT+TGG - chr7.1:55277272-55277291 None:intergenic 55.0%
TATCGGAGTGCATACGGTGG+AGG + chr7.1:55277340-55277359 MS.gene36181:CDS 55.0%
TCAGGTGGATGGGTGTAACG+TGG + chr7.1:55277543-55277562 MS.gene36181:CDS 55.0%
! AAGCGAGGTAGGGTGTCAAG+AGG + chr7.1:55277747-55277766 MS.gene36181:intron 55.0%
! ATACGGTGGAGGTGTGTCTC+GGG + chr7.1:55277351-55277370 MS.gene36181:CDS 55.0%
! CAGTATCGGAGTGCATACGG+TGG + chr7.1:55277337-55277356 MS.gene36181:CDS 55.0%
! CATACGGTGGAGGTGTGTCT+CGG + chr7.1:55277350-55277369 MS.gene36181:CDS 55.0%
! GGTTGGCGGGTGAGAAGAAA+GGG + chr7.1:55277449-55277468 MS.gene36181:CDS 55.0%
!! AGATGTGAGTGGTGGGTTGG+CGG + chr7.1:55277435-55277454 MS.gene36181:CDS 55.0%
!! CACAGCACAGGTGTCACTGT+CGG - chr7.1:55278816-55278835 None:intergenic 55.0%
!! GGAGGATATTGTGGTGGTGG+TGG + chr7.1:55277475-55277494 MS.gene36181:CDS 55.0%
!! GTTGTGGGGACTGGTTCTTC+AGG + chr7.1:55279919-55279938 MS.gene36181:intron 55.0%
ACCTGCCTCGTTACGGTTGG+CGG - chr7.1:55277269-55277288 None:intergenic 60.0%
CAGCGCTGCATCTTACGGAG+AGG - chr7.1:55280838-55280857 None:intergenic 60.0%
GCATTTGCAGCACCATGCCG+TGG + chr7.1:55280928-55280947 MS.gene36181:CDS 60.0%
GGCGGTGACAAGATGTCAGG+TGG + chr7.1:55277528-55277547 MS.gene36181:CDS 60.0%
! CGTCCGTCGCTTTCGTTCTG+AGG - chr7.1:55277316-55277335 None:intergenic 60.0%
! GGGTTGGCGGGTGAGAAGAA+AGG + chr7.1:55277448-55277467 MS.gene36181:CDS 60.0%
! TACGGTGGAGGTGTGTCTCG+GGG + chr7.1:55277352-55277371 MS.gene36181:CDS 60.0%
!! CGTCGCTTTCGTTCTGAGGC+AGG - chr7.1:55277312-55277331 None:intergenic 60.0%
!! GATGTGAGTGGTGGGTTGGC+GGG + chr7.1:55277436-55277455 MS.gene36181:CDS 60.0%
!! TGGTGGTGGTGGGAAGACAG+CGG + chr7.1:55277486-55277505 MS.gene36181:CDS 60.0%
TGCCTCGTTACGGTTGGCGG+CGG - chr7.1:55277266-55277285 None:intergenic 65.0%
!! GGCGGTGGCGGGTGGTTATA+CGG + chr7.1:55277507-55277526 MS.gene36181:CDS 65.0%
!! GGTGGCGGGTGGTTATACGG+CGG + chr7.1:55277510-55277529 MS.gene36181:CDS 65.0%
!! TGGTGGTGGGAAGACAGCGG+CGG + chr7.1:55277489-55277508 MS.gene36181:CDS 65.0%
CTCCGCCGCCAACCGTAACG+AGG + chr7.1:55277261-55277280 MS.gene36181:CDS 70.0%
GCCGCCAACCGTAACGAGGC+AGG + chr7.1:55277265-55277284 MS.gene36181:CDS 70.0%
TGGGAAGACAGCGGCGGTGG+CGG + chr7.1:55277495-55277514 MS.gene36181:CDS 70.0%
TGGTGGGAAGACAGCGGCGG+TGG + chr7.1:55277492-55277511 MS.gene36181:CDS 70.0%
GGGAAGACAGCGGCGGTGGC+GGG + chr7.1:55277496-55277515 MS.gene36181:CDS 75.0%
!! AAGACAGCGGCGGTGGCGGG+TGG + chr7.1:55277499-55277518 MS.gene36181:CDS 75.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 55277097 55281018 55277097 ID=MS.gene36181
chr7.1 mRNA 55277097 55281018 55277097 ID=MS.gene36181.t1;Parent=MS.gene36181
chr7.1 exon 55277097 55277680 55277097 ID=MS.gene36181.t1.exon1;Parent=MS.gene36181.t1
chr7.1 CDS 55277097 55277680 55277097 ID=cds.MS.gene36181.t1;Parent=MS.gene36181.t1
chr7.1 exon 55279941 55280059 55279941 ID=MS.gene36181.t1.exon2;Parent=MS.gene36181.t1
chr7.1 CDS 55279941 55280059 55279941 ID=cds.MS.gene36181.t1;Parent=MS.gene36181.t1
chr7.1 exon 55280777 55281018 55280777 ID=MS.gene36181.t1.exon3;Parent=MS.gene36181.t1
chr7.1 CDS 55280777 55281018 55280777 ID=cds.MS.gene36181.t1;Parent=MS.gene36181.t1
Gene Sequence

>MS.gene36181

ATGGACTTTGGAGGGAACATGTTCTGTCTCAACAACAGAGACCAAAGTAATACTAACAATAACGGTAACAGTAACGGTTTTACTTGGTGTAGTAGTGGTAGTGCTACTACTGGTACTGCATGGCACATGAATACTTTCAATGTTAATGAGGAAAACAATTCAGTCTCCGCCGCCAACCGTAACGAGGCAGGTCTAGCTAACGCGCTTATGTACCTGCCTCAGAACGAAAGCGACGGACGACAGTATCGGAGTGCATACGGTGGAGGTGTGTCTCGGGGTCACATGATGCCTGATCCACACCTCACATGTTTGAAGTTGGGGAAGAGACATTATTTTGAAGATGTGAGTGGTGGGTTGGCGGGTGAGAAGAAAGGGAAAGGAGGATATTGTGGTGGTGGTGGGAAGACAGCGGCGGTGGCGGGTGGTTATACGGCGGTGACAAGATGTCAGGTGGATGGGTGTAACGTGGCATTGATGAATGCTAAGGAGTATCATAGGAGACATAAGGTTTGTGAGATTCATTCAAAGGCACCAAAAGTTGTGGTGTTGGGTTTGGAGCAAAGATTCTGTCAACAGTGTAGCAGGTTAGTGTGTTACTCTGTCGTTATCTCATAATACTACTAATATATTTTATTTATTTTTTTAATAAAAAGCGAGGTAGGGTGTCAAGAGGTTCAAACCCGATCTCTGCATATAATTGTCGTTATGTTCACCGAGACTATTATATATTATATTGTATTTATTACAAATAATATTACTATGTATAATCCAATATATGTTTTAGTATGAACAAAAACAAATTATTAGTACTCTTACTCAATCCAAATTTAGCAGTAAATATTATCTCATAATTCTATTAATTTTTTAGTATAATCAAAAACAAATTATTAGTACTCTTACTCAATCCAAATTTAGCAGTAAATATTATCGCATAATTCTATTAATTTTTTAGTATAATCAAAAACAAATTATTAGTTGAAAATATTCATTTTTTTTATCAGGTAATTTAGTGGATAGAATTCACCTTTTTCAAGGTGAATAAGTGGGGTGTCTAGGATTTGAACCCCAACCTCTGCATATAATTATGCATGTCCTGTCAACTGAGTTATCCTCGTGGGGATTGATAATATTCATTTTACTCCTTAAAATGATCGTTGTAACTGTCATTCATTTGATCTATGCTTGATTGTTGGGTTTGAGTTTGGATATGCGATTCTCTACTTCTTTGCACTTAATATTTATTTACTATTTGACAAAAAAACATGATTTGTTTGACTGTTTCAATTTTCATTTTCATCGTTTTATTTATGTACTCTCCTGACCTGCAGAGAATGTACATATATTTACCTTTGGTGTTGGAGGGAGTAGATGATATTTACCCTCTTTAAACCCAACAAATGTATTTGGTGTTGGTTGGAATAATAATGGTTTAGACGACAAAAGTGGATTTTCAAATATAAACTACGGTTCTGAATTTTTCTGAAACATTTTAGTATAGATGTGTGACTATGATATATTTATGAAAAATTAAATACTTTTCTGACAGTAATTACCTCATATTATTTTATCAATAGATATTAAAAAAGGATATTAGGGGTTTCTGGGAGCTTAACGACAGGGACATTGCATAATATATGTAGGAATCGGAGTTCGAACCCAAGATATCCTACTTTTTTACATGTAAAATAGGTGAGCTTCATCCACTAGACTATTTAACCGACAGTGACACCTGTGCTGTGTGACTAGGGAGTGAACAGCCTTCTTAACCTATCTCTAACAAACTATTGCAAAATAAAAATTTGGACTATGATGTAATTTTCACTTACTCTCACTTAGTATACCACTAAATTCAAATAGATCCAACTAACTGTTGATAACAATTTGTGAATCTATCTCACAATTTGCATAATATTCAATTTTTGCCCTCCCAAGAGAATTCAAAAACCTAAATATTCACCTTCCATCTCGGATTAGTCCATAAAGAACAAGCTCAAATAAACACATCCGCTATTGGAAAAAAGTCAAGTCCCACAAACACGTTTTTTTATAAAACCGCTATTGAAAGTGCATCTTTTTATGAATTCTTATAAGAATTCTATCTATCTGATGTATGATTTGAGTTTATTTTCTTCCAATATCTGCATGTATATTAATAGTGGATCCAAGATGATTCACACAATCCGGATCTTAATCTTAGTGAATGAAAATCTAAGCTCCAAAAAGAAGCCTATACAACTACAAAATATATCATTTATTACTAGAAAATTTCAAACATACAAAGATTATCTTTGAGTAGCTTTGATGTTTAGAGTTTTAGTAAAAAATGAATTTATAATAATAATACCAACAAATGAACTCTTTAGTTGGATCAAATTGATACTATCAATTAAAAAAAAAAAAGGTATTGATTTTAGAGGCCTGGGTCAAAGGTGTAAAAGTTATGTGGGAATAGATTTCTCATCTTTGCACTCCCTCCGTCCCTTAGTATAAGAGTAATTTACAAAAAATCACGGATATTAAGAATAGTTGCTGGAGTAATAAATATATTTGAAAAATATGTAACTATTACTAGGTTGCCCTTTATGTATAAATGCAATCAATGTTGATTTTCATGTTCCAAGACAATTGATAGTATTAGTAAGGGGTATAATTGGAAAAAGAGTATCTTATATTTATGGACAAACATTTTTTTGCAAATGGTCTTATAATTAAGGACCGAAGGAGTATTATTTTTTATTTGCACACAATGTTGTATGGTTTTTAATTTTATGTTTTAGGGATTTGTTCATCTGTTAATTGAGATAATTAATATGAAAAATGTGGTTGTGGGGACTGGTTCTTCAGGTTCCATGTTGTGTCAGAATTTGATGATTCAAAGAGAAGTTGTAGAAGGAGACTGGCTGGGCACAATGAGAGAAGAAGAAAGAGCTCCCATGATTCTGTTGGGAGGAATTCCTCACAAGGCAAGATTGTGTTTTTTCTTTGTGAACTTGCAACTTGAATTATACTTATTGCAAAATCTACAATCAATTTTTTACCATGAAATTTACTTTTTTTGAACAATTTTTTACCATGACATTCAATGCAATTGTATCTCATTTTCAGTACGTTATACTGCAATTTGATTCTTGCTTAGAAATTGAAAGAAGATGAATAATACCTCATGCATTGAAAATAAATAAGAGTACACGATTTTTTTGGTCGTTAAATGTATGCGATAGTGTAACTATAGTCCTCGAACGTCTCAAATTTACATAAACATCATTGAATGTATCTTCAGTTTGTAACTTGATGGACCAAAATAACAAATCTAAGACACTTTCAAAGAACGAACGAACTAACTAAAGATAAACAAATTCGCGGAAGAAAAAACCAACGAAAAACATATTCAAGGCAAGTTTTGTACTTCTGTTGATAAATGTCTTCCTAGAATGAAATTTCCACAACATATTACATTTAAAGATATATATGATTTATAAGGTTAGATTTGCAATCTTATTATTGATGTGTTCTAAATGCATTCAAACGACCCAAGGTTTTCCATTTTGTTTATCTACTTAGTAAAGTAATTGCATGTATTGCTATTTTTACAGAGAAAAGAAGATAATGTTTAGACATGTAATTTTCTTCATAGTAGACAATATGTTGATGGTTGGTGGTTTTTTGTTTCTTGTAATCAGGTGGGTGTGCTTTCTCTCTTCTGTCATCTCGGACTGATTCATGGCTTTCACCGGCTGACCTCTCCGTAAGATGCAGCGCTGCATTAAGCGAATTGATAGCAGAAAACCGAGCATCGATAATGGCTAGGCAATACGTCTCAGACAGAGACTGGCATTTGCAGCACCATGCCGTGGAAGACTACAAGGAGATCCAATCCGAGTCCAATTATTTCCCACAACATATGTTTCCGCAGACACATTAG
Protein sequence

>MS.gene36181.t1

MDFGGNMFCLNNRDQSNTNNNGNSNGFTWCSSGSATTGTAWHMNTFNVNEENNSVSAANRNEAGLANALMYLPQNESDGRQYRSAYGGGVSRGHMMPDPHLTCLKLGKRHYFEDVSGGLAGEKKGKGGYCGGGGKTAAVAGGYTAVTRCQVDGCNVALMNAKEYHRRHKVCEIHSKAPKVVVLGLEQRFCQQCSRFHVVSEFDDSKRSCRRRLAGHNERRRKSSHDSVGRNSSQGGCAFSLLSSRTDSWLSPADLSVRCSAALSELIAENRASIMARQYVSDRDWHLQHHAVEDYKEIQSESNYFPQHMFPQTH