Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38800.t1 | XP_013449574.1 | 96.5 | 369 | 13 | 0 | 1 | 369 | 1 | 369 | 2.20E-206 | 728 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38800.t1 | Q4V3D9 | 61.0 | 367 | 141 | 2 | 5 | 369 | 8 | 374 | 3.8e-127 | 456.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38800.t1 | A0A072U1P3 | 96.5 | 369 | 13 | 0 | 1 | 369 | 1 | 369 | 1.6e-206 | 728.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene059296 | MS.gene38800 | PPI |
| MS.gene66625 | MS.gene38800 | PPI |
| MS.gene38800 | MS.gene61630 | PPI |
| MS.gene061292 | MS.gene38800 | PPI |
| MS.gene034366 | MS.gene38800 | PPI |
| MS.gene38800 | MS.gene35719 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38800.t1 | MTR_7g490350 | 96.477 | 369 | 13 | 0 | 1 | 369 | 1 | 369 | 0.0 | 736 |
| MS.gene38800.t1 | MTR_7g090300 | 86.992 | 369 | 48 | 0 | 1 | 369 | 1 | 369 | 0.0 | 659 |
| MS.gene38800.t1 | MTR_7g490330 | 69.890 | 362 | 64 | 2 | 8 | 369 | 9 | 325 | 0.0 | 509 |
| MS.gene38800.t1 | MTR_5g091980 | 70.994 | 362 | 58 | 3 | 8 | 369 | 9 | 323 | 0.0 | 508 |
| MS.gene38800.t1 | MTR_2g087780 | 48.072 | 389 | 168 | 5 | 12 | 369 | 10 | 395 | 2.44e-119 | 351 |
| MS.gene38800.t1 | MTR_4g050190 | 50.440 | 341 | 156 | 6 | 38 | 369 | 55 | 391 | 1.78e-114 | 338 |
| MS.gene38800.t1 | MTR_7g090320 | 47.289 | 332 | 162 | 5 | 50 | 368 | 55 | 386 | 4.00e-108 | 322 |
| MS.gene38800.t1 | MTR_7g090310 | 47.273 | 330 | 162 | 5 | 51 | 368 | 56 | 385 | 1.31e-107 | 321 |
| MS.gene38800.t1 | MTR_2g099030 | 49.704 | 338 | 159 | 5 | 36 | 364 | 66 | 401 | 2.50e-107 | 321 |
| MS.gene38800.t1 | MTR_4g112670 | 38.066 | 331 | 172 | 3 | 44 | 367 | 30 | 334 | 5.10e-78 | 243 |
| MS.gene38800.t1 | MTR_4g112650 | 35.054 | 368 | 195 | 5 | 1 | 363 | 1 | 329 | 1.93e-73 | 231 |
| MS.gene38800.t1 | MTR_2g058450 | 40.557 | 323 | 162 | 5 | 52 | 369 | 39 | 336 | 6.19e-72 | 228 |
| MS.gene38800.t1 | MTR_4g112630 | 33.867 | 375 | 191 | 6 | 1 | 368 | 1 | 325 | 1.46e-71 | 226 |
| MS.gene38800.t1 | MTR_4g112620 | 32.602 | 319 | 152 | 3 | 53 | 368 | 42 | 300 | 1.54e-55 | 184 |
| MS.gene38800.t1 | MTR_2g058410 | 34.646 | 254 | 141 | 3 | 114 | 366 | 1 | 230 | 1.08e-43 | 151 |
| MS.gene38800.t1 | MTR_8g074270 | 30.541 | 370 | 211 | 12 | 5 | 364 | 28 | 361 | 7.86e-37 | 137 |
| MS.gene38800.t1 | MTR_8g074170 | 32.414 | 290 | 156 | 8 | 8 | 278 | 14 | 282 | 2.05e-36 | 136 |
| MS.gene38800.t1 | MTR_0003s0530 | 32.692 | 208 | 110 | 2 | 158 | 361 | 2 | 183 | 3.46e-36 | 130 |
| MS.gene38800.t1 | MTR_8g074210 | 32.308 | 260 | 148 | 6 | 29 | 284 | 53 | 288 | 5.29e-33 | 127 |
| MS.gene38800.t1 | MTR_2g042420 | 27.100 | 369 | 238 | 11 | 6 | 369 | 7 | 349 | 2.55e-28 | 113 |
| MS.gene38800.t1 | MTR_2g042370 | 29.841 | 315 | 198 | 10 | 63 | 369 | 58 | 357 | 1.13e-27 | 112 |
| MS.gene38800.t1 | MTR_2g042430 | 27.476 | 313 | 201 | 8 | 54 | 365 | 77 | 364 | 1.94e-27 | 111 |
| MS.gene38800.t1 | MTR_4g112840 | 45.833 | 96 | 52 | 0 | 185 | 280 | 57 | 152 | 4.93e-25 | 100 |
| MS.gene38800.t1 | MTR_1g075865 | 39.623 | 106 | 63 | 1 | 162 | 267 | 7 | 111 | 1.31e-21 | 89.7 |
| MS.gene38800.t1 | MTR_8g074320 | 37.267 | 161 | 87 | 5 | 80 | 236 | 71 | 221 | 1.17e-19 | 87.0 |
| MS.gene38800.t1 | MTR_2g058430 | 39.175 | 97 | 57 | 1 | 105 | 199 | 52 | 148 | 2.88e-15 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38800.t1 | AT3G57030 | 60.858 | 373 | 139 | 4 | 4 | 369 | 2 | 374 | 8.91e-163 | 461 |
| MS.gene38800.t1 | AT5G22020 | 50.689 | 363 | 164 | 6 | 19 | 369 | 36 | 395 | 1.33e-122 | 359 |
| MS.gene38800.t1 | AT5G22020 | 50.689 | 363 | 164 | 6 | 19 | 369 | 36 | 395 | 1.33e-122 | 359 |
| MS.gene38800.t1 | AT5G22020 | 50.689 | 363 | 164 | 6 | 19 | 369 | 36 | 395 | 1.33e-122 | 359 |
| MS.gene38800.t1 | AT1G08470 | 51.275 | 353 | 157 | 7 | 27 | 369 | 42 | 389 | 7.51e-119 | 350 |
| MS.gene38800.t1 | AT3G57020 | 48.459 | 357 | 176 | 6 | 13 | 366 | 15 | 366 | 6.33e-113 | 334 |
| MS.gene38800.t1 | AT3G57010 | 48.087 | 366 | 177 | 7 | 5 | 366 | 11 | 367 | 6.03e-111 | 329 |
| MS.gene38800.t1 | AT2G41300 | 52.903 | 310 | 141 | 3 | 59 | 366 | 84 | 390 | 8.38e-111 | 329 |
| MS.gene38800.t1 | AT2G41290 | 51.039 | 337 | 152 | 8 | 44 | 369 | 42 | 376 | 2.28e-108 | 322 |
| MS.gene38800.t1 | AT3G57020 | 46.779 | 357 | 168 | 6 | 13 | 366 | 15 | 352 | 1.57e-105 | 314 |
| MS.gene38800.t1 | AT3G59530 | 46.547 | 333 | 157 | 5 | 43 | 366 | 74 | 394 | 3.73e-98 | 297 |
| MS.gene38800.t1 | AT3G59530 | 46.547 | 333 | 157 | 5 | 43 | 366 | 74 | 394 | 3.73e-98 | 297 |
| MS.gene38800.t1 | AT3G59530 | 46.547 | 333 | 157 | 5 | 43 | 366 | 74 | 394 | 3.73e-98 | 297 |
| MS.gene38800.t1 | AT1G74020 | 36.261 | 353 | 174 | 7 | 22 | 369 | 21 | 327 | 3.09e-67 | 216 |
| MS.gene38800.t1 | AT1G74010 | 35.411 | 353 | 176 | 8 | 22 | 369 | 20 | 325 | 6.22e-63 | 204 |
| MS.gene38800.t1 | AT1G74000 | 34.286 | 350 | 179 | 8 | 25 | 369 | 26 | 329 | 7.05e-61 | 199 |
| MS.gene38800.t1 | AT3G51440 | 32.932 | 249 | 147 | 6 | 40 | 287 | 56 | 285 | 4.74e-30 | 119 |
| MS.gene38800.t1 | AT3G51430 | 28.767 | 292 | 170 | 8 | 8 | 280 | 6 | 278 | 1.25e-28 | 115 |
| MS.gene38800.t1 | AT3G51420 | 25.806 | 372 | 239 | 10 | 5 | 364 | 10 | 356 | 1.55e-28 | 114 |
| MS.gene38800.t1 | AT3G51430 | 28.621 | 290 | 169 | 8 | 8 | 278 | 6 | 276 | 1.99e-28 | 114 |
| MS.gene38800.t1 | AT3G51450 | 30.531 | 226 | 137 | 6 | 54 | 278 | 70 | 276 | 1.02e-26 | 109 |
Find 103 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATTCAGAAGGGCAATTT+TGG | 0.135114 | 7.1:-16959021 | MS.gene38800:CDS |
| TGCTGTTCTTCCAGGCTTTC+CGG | 0.166671 | 7.1:-16959056 | MS.gene38800:CDS |
| CTTTGCAAAAGGAGTTTCTT+TGG | 0.277915 | 7.1:+16958985 | None:intergenic |
| CAAAGATGGTTCATTTCTTC+TGG | 0.280166 | 7.1:-16959152 | MS.gene38800:CDS |
| GGAATGGGAAGTGGTGAAAA+AGG | 0.294393 | 7.1:+16961772 | None:intergenic |
| CCGCAAACATGCTCCAATTC+TGG | 0.295892 | 7.1:+16959977 | None:intergenic |
| CTTCAGCTTCTGTTGCTACC+TGG | 0.301557 | 7.1:+16959852 | None:intergenic |
| TTTATGCTTGTACTTCTTAG+TGG | 0.329760 | 7.1:-16959271 | MS.gene38800:CDS |
| GTATCGACTTGGCCAGCTTT+TGG | 0.341303 | 7.1:+16959082 | None:intergenic |
| AAACTATAAACACCAATATA+AGG | 0.349899 | 7.1:+16958740 | None:intergenic |
| GCATCCATTTGCACCAGAAT+TGG | 0.369415 | 7.1:-16959990 | MS.gene38800:CDS |
| TCAGTGTTAATGCCTTATAT+TGG | 0.379831 | 7.1:-16958752 | MS.gene38800:CDS |
| TTCAGCTTCTGTTGCTACCT+GGG | 0.392053 | 7.1:+16959853 | None:intergenic |
| AATTTCACTGATAAACTTCA+AGG | 0.392324 | 7.1:+16958805 | None:intergenic |
| CAGAATTGGAGCATGTTTGC+GGG | 0.396324 | 7.1:-16959976 | MS.gene38800:CDS |
| CAGGCTTTCCGGACAATGTA+AGG | 0.397344 | 7.1:-16959045 | MS.gene38800:CDS |
| AAGAGAAAGATGGAAAACTT+TGG | 0.414332 | 7.1:-16958781 | MS.gene38800:CDS |
| GAATTTCTCCTTACATTGTC+CGG | 0.417842 | 7.1:+16959037 | None:intergenic |
| TGCTCCAATTCTGGTGCAAA+TGG | 0.427089 | 7.1:+16959986 | None:intergenic |
| AGTGGTGAGGTTACCTTCTC+CGG | 0.437187 | 7.1:+16959747 | None:intergenic |
| AGGGGAAATATTAGAAGTCT+TGG | 0.437484 | 7.1:-16958846 | MS.gene38800:CDS |
| ACTCTCCGGCCCGACGGCTC+CGG | 0.441292 | 7.1:+16961705 | None:intergenic |
| TTGTTTAAAGCAACACCGTT+GGG | 0.447280 | 7.1:+16959172 | None:intergenic |
| CGTGCAGGATTCTGAGGCTC+TGG | 0.451420 | 7.1:-16959114 | MS.gene38800:CDS |
| CCATCTGCCACACCGGTGTA+AGG | 0.451702 | 7.1:+16961655 | None:intergenic |
| CATGTTTGCGGGAGGCCGCT+AGG | 0.451723 | 7.1:-16959965 | MS.gene38800:CDS |
| GCTATAAAGCTGAGTGATGA+AGG | 0.452061 | 7.1:-16958866 | MS.gene38800:CDS |
| CTCAAAGTAGTAGGACCTGC+AGG | 0.452562 | 7.1:-16959887 | MS.gene38800:CDS |
| CTGCAGGTCCTACTACTTTG+AGG | 0.453606 | 7.1:+16959888 | None:intergenic |
| GGTGTTGCTTTAAACAAAGA+TGG | 0.455642 | 7.1:-16959166 | MS.gene38800:CDS |
| CTTACATTGTCCGGAAAGCC+TGG | 0.462228 | 7.1:+16959046 | None:intergenic |
| CTTCTTAGTGGAGACAAGAC+TGG | 0.468447 | 7.1:-16959259 | MS.gene38800:CDS |
| TGGCTTCGTGGACCAAAAGC+TGG | 0.469873 | 7.1:-16959094 | MS.gene38800:CDS |
| GAAGACATCCACTTTGCAAA+AGG | 0.471070 | 7.1:+16958974 | None:intergenic |
| CCAGAATTGGAGCATGTTTG+CGG | 0.473671 | 7.1:-16959977 | MS.gene38800:CDS |
| TGCTTTACCAGCCCACAGAT+TGG | 0.476574 | 7.1:+16958952 | None:intergenic |
| TGGAGGTTATTCTTCGATCC+AGG | 0.480959 | 7.1:+16961751 | None:intergenic |
| ATTCTGAGGCTCTGGCTTCG+TGG | 0.482857 | 7.1:-16959106 | MS.gene38800:CDS |
| TTCACTGATGTCCATGTCAT+TGG | 0.484026 | 7.1:+16959811 | None:intergenic |
| TACATTGCCGATGCCTACCT+TGG | 0.484771 | 7.1:-16959911 | MS.gene38800:CDS |
| TTATTCTTCGATCCAGGAAT+GGG | 0.485505 | 7.1:+16961757 | None:intergenic |
| CAAGTGGTTGCATGCGTCGT+TGG | 0.488754 | 7.1:-16958909 | MS.gene38800:CDS |
| AATTGCAGAAACAATTATGT+TGG | 0.489968 | 7.1:+16961843 | None:intergenic |
| TTGCTGTCACCAGCTCCAAT+AGG | 0.491349 | 7.1:-16961588 | MS.gene38800:intron |
| GGTAAAGCATTGTCAAAGCT+TGG | 0.494050 | 7.1:-16958938 | MS.gene38800:CDS |
| AGTGAAATTGAAGAGAAAGA+TGG | 0.502065 | 7.1:-16958791 | MS.gene38800:CDS |
| CTTTCATTTCACCAATGACA+TGG | 0.505875 | 7.1:-16959822 | MS.gene38800:CDS |
| GTTATTCTTCGATCCAGGAA+TGG | 0.510426 | 7.1:+16961756 | None:intergenic |
| CTCCACGTCACCGGAGCCGT+CGG | 0.510457 | 7.1:-16961715 | MS.gene38800:CDS |
| TAGCTGAAACTTCGACGTGC+AGG | 0.518375 | 7.1:-16959129 | MS.gene38800:CDS |
| CTTCGACGTGCAGGATTCTG+AGG | 0.524883 | 7.1:-16959120 | MS.gene38800:CDS |
| ATGTCTTCCAATCTGTGGGC+TGG | 0.527680 | 7.1:-16958959 | MS.gene38800:CDS |
| TACCTTGGCCTCAAAGTAGT+AGG | 0.529175 | 7.1:-16959896 | MS.gene38800:CDS |
| GCCCGACGGCTCCGGTGACG+TGG | 0.533854 | 7.1:+16961713 | None:intergenic |
| TTCGATCCAGGAATGGGAAG+TGG | 0.538313 | 7.1:+16961763 | None:intergenic |
| GTCCTACTACTTTGAGGCCA+AGG | 0.539170 | 7.1:+16959894 | None:intergenic |
| CAAGCACAGTCTACCGGAGA+AGG | 0.539363 | 7.1:-16959760 | MS.gene38800:intron |
| GAAGTGAAGGTCTTATTAAG+TGG | 0.540757 | 7.1:-16959205 | MS.gene38800:CDS |
| AGCTTTATAGCTGCAGCATG+AGG | 0.541139 | 7.1:+16958878 | None:intergenic |
| CCTTACACCGGTGTGGCAGA+TGG | 0.541774 | 7.1:-16961655 | MS.gene38800:CDS |
| AAGTCTTGGAAGATTGTGAA+GGG | 0.545802 | 7.1:-16958832 | MS.gene38800:CDS |
| GAAAGATGGAAAACTTTGGA+TGG | 0.549433 | 7.1:-16958777 | MS.gene38800:CDS |
| TCCACGTCACCGGAGCCGTC+GGG | 0.553815 | 7.1:-16961714 | MS.gene38800:CDS |
| AGTGGATGTCTTCCAATCTG+TGG | 0.557035 | 7.1:-16958964 | MS.gene38800:CDS |
| CTGATTCAAGCACAGTCTAC+CGG | 0.566496 | 7.1:-16959766 | MS.gene38800:CDS |
| CGTCACCGGAGCCGTCGGGC+CGG | 0.571004 | 7.1:-16961710 | MS.gene38800:CDS |
| GGGAAGGAGAAGAACGTGGT+TGG | 0.573176 | 7.1:-16961618 | MS.gene38800:CDS |
| AGCTTCTGTTGCTACCTGGG+TGG | 0.577553 | 7.1:+16959856 | None:intergenic |
| GAAGTCTTGGAAGATTGTGA+AGG | 0.580211 | 7.1:-16958833 | MS.gene38800:CDS |
| TTTGTTTAAAGCAACACCGT+TGG | 0.580212 | 7.1:+16959171 | None:intergenic |
| TTCTTAGTGGAGACAAGACT+GGG | 0.585823 | 7.1:-16959258 | MS.gene38800:CDS |
| ATAGTGTTACCTATTGGAGC+TGG | 0.585957 | 7.1:+16961579 | None:intergenic |
| GTGGATGTCTTCCAATCTGT+GGG | 0.586357 | 7.1:-16958963 | MS.gene38800:CDS |
| CTATAAAGCTGAGTGATGAA+GGG | 0.586876 | 7.1:-16958865 | MS.gene38800:CDS |
| TAAGTCAACAAAAGAAGTGA+AGG | 0.587895 | 7.1:-16959218 | MS.gene38800:CDS |
| ATGTCATTGGTGAAATGAAA+GGG | 0.588342 | 7.1:+16959824 | None:intergenic |
| GAACAGCAAAAGTATCGACT+TGG | 0.589428 | 7.1:+16959071 | None:intergenic |
| TTTGAGGCCAAGGTAGGCAT+CGG | 0.599880 | 7.1:+16959904 | None:intergenic |
| CAAAGCTTGGAAACTTCAAG+TGG | 0.602913 | 7.1:-16958925 | MS.gene38800:CDS |
| GCTAAGTTACTCCACGTCAC+CGG | 0.608816 | 7.1:-16961724 | MS.gene38800:CDS |
| TCAAAGTAGTAGGACCTGCA+GGG | 0.609993 | 7.1:-16959886 | MS.gene38800:CDS |
| CATGTCATTGGTGAAATGAA+AGG | 0.611001 | 7.1:+16959823 | None:intergenic |
| TATAAAGCTGAGTGATGAAG+GGG | 0.611274 | 7.1:-16958864 | MS.gene38800:CDS |
| CATTGGTGAAATGAAAGGGC+TGG | 0.613755 | 7.1:+16959828 | None:intergenic |
| AATCCGACCATCTGCCACAC+CGG | 0.619539 | 7.1:+16961648 | None:intergenic |
| ACACCGGTGTGGCAGATGGT+CGG | 0.622512 | 7.1:-16961651 | MS.gene38800:CDS |
| GTTGAATGAGGTGAAGATGA+TGG | 0.627043 | 7.1:+16961804 | None:intergenic |
| CGTGGAGTAACTTAGCAGCA+TGG | 0.632964 | 7.1:+16961731 | None:intergenic |
| AATGTAAGGAGAAATTCAGA+AGG | 0.634592 | 7.1:-16959031 | MS.gene38800:CDS |
| CAAAGTAGTAGGACCTGCAG+GGG | 0.636010 | 7.1:-16959885 | MS.gene38800:CDS |
| AATTGGAGCATGTTTGCGGG+AGG | 0.638644 | 7.1:-16959973 | MS.gene38800:CDS |
| AACAAGACTCTCCGGCCCGA+CGG | 0.638897 | 7.1:+16961699 | None:intergenic |
| TACTACTTTGAGGCCAAGGT+AGG | 0.651419 | 7.1:+16959898 | None:intergenic |
| AAGTGGGAAGGAGAAGAACG+TGG | 0.651427 | 7.1:-16961622 | MS.gene38800:CDS |
| TTATCAAACTTCAGTCCTAG+CGG | 0.652217 | 7.1:+16959950 | None:intergenic |
| CAGGTAGCAACAGAAGCTGA+AGG | 0.655103 | 7.1:-16959851 | MS.gene38800:CDS |
| CAACACCGTTGGGAAAAGCA+AGG | 0.663403 | 7.1:+16959182 | None:intergenic |
| ATGTAAGGAGAAATTCAGAA+GGG | 0.672339 | 7.1:-16959030 | MS.gene38800:CDS |
| CATGGTGAAGGTCCTTACAC+CGG | 0.675393 | 7.1:-16961667 | MS.gene38800:CDS |
| TGAAGGTCCTTACACCGGTG+TGG | 0.699329 | 7.1:-16961662 | MS.gene38800:CDS |
| TTAGTGGAGACAAGACTGGG+AGG | 0.734887 | 7.1:-16959255 | MS.gene38800:CDS |
| AAAGTAGTAGGACCTGCAGG+GGG | 0.741804 | 7.1:-16959884 | MS.gene38800:CDS |
| GGAGTAACTTAGCAGCATGG+AGG | 0.750487 | 7.1:+16961734 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATGTAAATAATTTTGTGTA+AGG | + | chr7.1:16960202-16960221 | None:intergenic | 15.0% |
| !! | AAAAGATAAATTGTGAAACT+TGG | + | chr7.1:16959050-16959069 | None:intergenic | 20.0% |
| !! | AAACTATAAACACCAATATA+AGG | + | chr7.1:16961849-16961868 | None:intergenic | 20.0% |
| !! | AATATGCAGTTTATTAAGTA+TGG | - | chr7.1:16960090-16960109 | MS.gene38800:intron | 20.0% |
| !! | ATCATAAGGATTGTTTATTT+AGG | + | chr7.1:16961012-16961031 | None:intergenic | 20.0% |
| !! | ATTTCAACTAATTTGAACAT+GGG | - | chr7.1:16960155-16960174 | MS.gene38800:intron | 20.0% |
| !! | CTTTGGTTACATAAAATTTA+GGG | - | chr7.1:16959426-16959445 | MS.gene38800:intron | 20.0% |
| !! | TATTGAAAAGTGAAGAAATA+CGG | + | chr7.1:16959194-16959213 | None:intergenic | 20.0% |
| !! | TATTTCAACTAATTTGAACA+TGG | - | chr7.1:16960154-16960173 | MS.gene38800:intron | 20.0% |
| !! | TCTTTGGTTACATAAAATTT+AGG | - | chr7.1:16959425-16959444 | MS.gene38800:intron | 20.0% |
| !!! | AATTTTGCATACTTGATTTT+TGG | - | chr7.1:16959276-16959295 | MS.gene38800:CDS | 20.0% |
| !!! | AGAAATTTTGATCTATATGT+TGG | - | chr7.1:16961272-16961291 | MS.gene38800:intron | 20.0% |
| !!! | TAATTTTACTCTAACAAACA+TGG | - | chr7.1:16959698-16959717 | MS.gene38800:intron | 20.0% |
| !!! | TTTGATTTTAAAACTCTTCT+TGG | - | chr7.1:16960410-16960429 | MS.gene38800:intron | 20.0% |
| ! | AAAAAGACATGTCTTGAAAT+CGG | + | chr7.1:16959499-16959518 | None:intergenic | 25.0% |
| ! | AATTGCAGAAACAATTATGT+TGG | + | chr7.1:16958746-16958765 | None:intergenic | 25.0% |
| ! | AATTTCACTGATAAACTTCA+AGG | + | chr7.1:16961784-16961803 | None:intergenic | 25.0% |
| ! | ATTGAAAAGTGAAGAAATAC+GGG | + | chr7.1:16959193-16959212 | None:intergenic | 25.0% |
| ! | CATATTGACATTTGATAAGT+TGG | - | chr7.1:16959152-16959171 | MS.gene38800:CDS | 25.0% |
| ! | CGCTAGACTATTAAAAAAAA+AGG | - | chr7.1:16959233-16959252 | MS.gene38800:CDS | 25.0% |
| ! | CTGAAGTTTGATAAAAAAAG+TGG | - | chr7.1:16960645-16960664 | MS.gene38800:intron | 25.0% |
| ! | GAATAATTAGCTCACAATAT+TGG | + | chr7.1:16960014-16960033 | None:intergenic | 25.0% |
| ! | TAACCAAAGAAAAAGAGTAA+AGG | + | chr7.1:16959415-16959434 | None:intergenic | 25.0% |
| ! | TGTAAATTACCTTTCTTCAA+GGG | + | chr7.1:16960036-16960055 | None:intergenic | 25.0% |
| ! | TTACTCTAACTAAACTAACA+TGG | - | chr7.1:16959755-16959774 | MS.gene38800:intron | 25.0% |
| ! | TTTCAACTAATTTGAACATG+GGG | - | chr7.1:16960156-16960175 | MS.gene38800:intron | 25.0% |
| !! | TTTACTCTTTTTCTACTACA+GGG | - | chr7.1:16959554-16959573 | MS.gene38800:intron | 25.0% |
| !!! | GTTTGTAGTTGTTATTTAGA+TGG | - | chr7.1:16959119-16959138 | MS.gene38800:CDS | 25.0% |
| !!! | TGAAAACTTTGTTTTTCTCT+TGG | - | chr7.1:16961214-16961233 | MS.gene38800:intron | 25.0% |
| !!! | TTTTAAGAGACGAAAGAATT+AGG | - | chr7.1:16959987-16960006 | MS.gene38800:CDS | 25.0% |
| AAACTTGGAAAACACCAAAT+AGG | + | chr7.1:16959035-16959054 | None:intergenic | 30.0% | |
| AACCAGAATGATCTTAACAA+AGG | + | chr7.1:16961116-16961135 | None:intergenic | 30.0% | |
| AAGAGAAAGATGGAAAACTT+TGG | - | chr7.1:16961805-16961824 | MS.gene38800:CDS | 30.0% | |
| AATGTAAGGAGAAATTCAGA+AGG | - | chr7.1:16961555-16961574 | MS.gene38800:intron | 30.0% | |
| ACGGTTGATCATTCAAAAAA+CGG | + | chr7.1:16961142-16961161 | None:intergenic | 30.0% | |
| AGGTAACACTATTACCTATT+TGG | - | chr7.1:16959018-16959037 | MS.gene38800:CDS | 30.0% | |
| AGTGAAATTGAAGAGAAAGA+TGG | - | chr7.1:16961795-16961814 | MS.gene38800:CDS | 30.0% | |
| ATATATGCTCTTCTATTCCT+AGG | + | chr7.1:16959836-16959855 | None:intergenic | 30.0% | |
| ATGATGACAGTATAAAGACT+TGG | - | chr7.1:16960329-16960348 | MS.gene38800:intron | 30.0% | |
| ATGTAAGGAGAAATTCAGAA+GGG | - | chr7.1:16961556-16961575 | MS.gene38800:intron | 30.0% | |
| ATGTCATTGGTGAAATGAAA+GGG | + | chr7.1:16960765-16960784 | None:intergenic | 30.0% | |
| CATGTGAAACATGAAGTAAA+AGG | + | chr7.1:16959942-16959961 | None:intergenic | 30.0% | |
| CTAATTATTCCCTTGAAGAA+AGG | - | chr7.1:16960024-16960043 | MS.gene38800:intron | 30.0% | |
| CTGTAAATTACCTTTCTTCA+AGG | + | chr7.1:16960037-16960056 | None:intergenic | 30.0% | |
| GACATTACTCAAACAATAGT+AGG | - | chr7.1:16960516-16960535 | MS.gene38800:intron | 30.0% | |
| TAAGTCAACAAAAGAAGTGA+AGG | - | chr7.1:16961368-16961387 | MS.gene38800:intron | 30.0% | |
| TAGGTAATAGTGTTACCTAT+TGG | + | chr7.1:16959016-16959035 | None:intergenic | 30.0% | |
| TATTAGAGAGTAATTCTTCG+AGG | + | chr7.1:16959883-16959902 | None:intergenic | 30.0% | |
| TCAGTGTTAATGCCTTATAT+TGG | - | chr7.1:16961834-16961853 | MS.gene38800:CDS | 30.0% | |
| TCTTACAATTGAGAATCAGA+AGG | + | chr7.1:16960230-16960249 | None:intergenic | 30.0% | |
| TGATGACAGTATAAAGACTT+GGG | - | chr7.1:16960330-16960349 | MS.gene38800:intron | 30.0% | |
| TGATTCTCAATTGTAAGAAC+TGG | - | chr7.1:16960232-16960251 | MS.gene38800:intron | 30.0% | |
| TTCCTTTGTTAAGATCATTC+TGG | - | chr7.1:16961111-16961130 | MS.gene38800:intron | 30.0% | |
| TTTATGCTTGTACTTCTTAG+TGG | - | chr7.1:16961315-16961334 | MS.gene38800:intron | 30.0% | |
| ! | AAATTCAGAAGGGCAATTTT+GGG | - | chr7.1:16961566-16961585 | MS.gene38800:intron | 30.0% |
| ! | AGAGTTTCAATCAAAGCATT+TGG | + | chr7.1:16960293-16960312 | None:intergenic | 30.0% |
| ! | AGGAATAGAAGAGCATATAT+TGG | - | chr7.1:16959836-16959855 | MS.gene38800:CDS | 30.0% |
| ! | CTTTACTCTTTTTCTACTAC+AGG | - | chr7.1:16959553-16959572 | MS.gene38800:intron | 30.0% |
| ! | GAATAGAAGAGCATATATTG+GGG | - | chr7.1:16959838-16959857 | MS.gene38800:CDS | 30.0% |
| ! | GAGTTTCAATCAAAGCATTT+GGG | + | chr7.1:16960292-16960311 | None:intergenic | 30.0% |
| ! | GGAATAGAAGAGCATATATT+GGG | - | chr7.1:16959837-16959856 | MS.gene38800:CDS | 30.0% |
| ! | GTTTAGTTGTACGATTTTCA+AGG | - | chr7.1:16960562-16960581 | MS.gene38800:intron | 30.0% |
| ! | TAAAGACAACTTGAAGTGTT+TGG | + | chr7.1:16959538-16959557 | None:intergenic | 30.0% |
| ! | TAATTCTTCGAGGTACTATA+GGG | + | chr7.1:16959873-16959892 | None:intergenic | 30.0% |
| ! | TTGCCTTTACTCTTTTTCTT+TGG | - | chr7.1:16959409-16959428 | MS.gene38800:intron | 30.0% |
| ! | TTTAAAACTCTTCTTGGAAC+TGG | - | chr7.1:16960416-16960435 | MS.gene38800:intron | 30.0% |
| !!! | AGTCTTGTTTTTGATAGTCA+TGG | - | chr7.1:16958901-16958920 | MS.gene38800:CDS | 30.0% |
| !!! | TGCATACTTGATTTTTGGTA+GGG | - | chr7.1:16959281-16959300 | MS.gene38800:intron | 30.0% |
| !!! | TGTTGGTTACTTTTATTTGC+AGG | - | chr7.1:16961289-16961308 | MS.gene38800:intron | 30.0% |
| !!! | TTGCATACTTGATTTTTGGT+AGG | - | chr7.1:16959280-16959299 | MS.gene38800:intron | 30.0% |
| AAAATTTCACTCTCACCACA+CGG | + | chr7.1:16961161-16961180 | None:intergenic | 35.0% | |
| AAAGATGTGCTCTTAACATG+TGG | + | chr7.1:16959969-16959988 | None:intergenic | 35.0% | |
| AAGTATGGTATAAAGCACAC+TGG | - | chr7.1:16960105-16960124 | MS.gene38800:intron | 35.0% | |
| AAGTCTTGGAAGATTGTGAA+GGG | - | chr7.1:16961754-16961773 | MS.gene38800:CDS | 35.0% | |
| ACAGCAAACGATATCTACAA+TGG | + | chr7.1:16961241-16961260 | None:intergenic | 35.0% | |
| ACATAGTTGCACATTTCCTA+AGG | + | chr7.1:16960466-16960485 | None:intergenic | 35.0% | |
| AGACACACATGACTATTGAA+AGG | + | chr7.1:16960877-16960896 | None:intergenic | 35.0% | |
| AGGGGAAATATTAGAAGTCT+TGG | - | chr7.1:16961740-16961759 | MS.gene38800:CDS | 35.0% | |
| AGTATGGTATAAAGCACACT+GGG | - | chr7.1:16960106-16960125 | MS.gene38800:intron | 35.0% | |
| AGTGACAGTGTAACATCATA+AGG | + | chr7.1:16961026-16961045 | None:intergenic | 35.0% | |
| CAAAGATGGTTCATTTCTTC+TGG | - | chr7.1:16961434-16961453 | MS.gene38800:intron | 35.0% | |
| CATGTCATTGGTGAAATGAA+AGG | + | chr7.1:16960766-16960785 | None:intergenic | 35.0% | |
| CTATAAAGCTGAGTGATGAA+GGG | - | chr7.1:16961721-16961740 | MS.gene38800:CDS | 35.0% | |
| CTATCAAAAACAAGACTCTC+CGG | + | chr7.1:16958898-16958917 | None:intergenic | 35.0% | |
| CTTTCATTTCACCAATGACA+TGG | - | chr7.1:16960764-16960783 | MS.gene38800:intron | 35.0% | |
| CTTTGCAAAAGGAGTTTCTT+TGG | + | chr7.1:16961604-16961623 | None:intergenic | 35.0% | |
| GAAAGATGGAAAACTTTGGA+TGG | - | chr7.1:16961809-16961828 | MS.gene38800:CDS | 35.0% | |
| GAATTTCTCCTTACATTGTC+CGG | + | chr7.1:16961552-16961571 | None:intergenic | 35.0% | |
| GACACACATGACTATTGAAA+GGG | + | chr7.1:16960876-16960895 | None:intergenic | 35.0% | |
| GATGACAGTATAAAGACTTG+GGG | - | chr7.1:16960331-16960350 | MS.gene38800:intron | 35.0% | |
| GTGCTTTGACTATGAGTAAT+TGG | - | chr7.1:16959311-16959330 | MS.gene38800:intron | 35.0% | |
| TATAAAGCTGAGTGATGAAG+GGG | - | chr7.1:16961722-16961741 | MS.gene38800:CDS | 35.0% | |
| TTATCAAACTTCAGTCCTAG+CGG | + | chr7.1:16960639-16960658 | None:intergenic | 35.0% | |
| TTATTCTTCGATCCAGGAAT+GGG | + | chr7.1:16958832-16958851 | None:intergenic | 35.0% | |
| TTCTTGGAACTGGACAAATT+GGG | - | chr7.1:16960426-16960445 | MS.gene38800:intron | 35.0% | |
| ! | AAGAAACTCCTTTTGCAAAG+TGG | - | chr7.1:16961604-16961623 | MS.gene38800:CDS | 35.0% |
| ! | AATTCTTCGAGGTACTATAG+GGG | + | chr7.1:16959872-16959891 | None:intergenic | 35.0% |
| ! | ACAGGGATTTCTTGAGTTTT+AGG | - | chr7.1:16959571-16959590 | MS.gene38800:intron | 35.0% |
| ! | GAAAGGGACGTAAATTTTAG+TGG | + | chr7.1:16960860-16960879 | None:intergenic | 35.0% |
| ! | GAAATTCAGAAGGGCAATTT+TGG | - | chr7.1:16961565-16961584 | MS.gene38800:intron | 35.0% |
| ! | GCTATTGTGCACGAAATTTT+TGG | - | chr7.1:16960917-16960936 | MS.gene38800:intron | 35.0% |
| ! | GTAATTCTTCGAGGTACTAT+AGG | + | chr7.1:16959874-16959893 | None:intergenic | 35.0% |
| ! | TAAAATTTAGGGTGAGTCGA+AGG | - | chr7.1:16959437-16959456 | MS.gene38800:intron | 35.0% |
| ! | TTACTTTCTAGGAGATCAGA+CGG | + | chr7.1:16960358-16960377 | None:intergenic | 35.0% |
| ! | TTGTTTAAAGCAACACCGTT+GGG | + | chr7.1:16961417-16961436 | None:intergenic | 35.0% |
| ! | TTTGTTTAAAGCAACACCGT+TGG | + | chr7.1:16961418-16961437 | None:intergenic | 35.0% |
| ! | TTTTGGACAAAATACGCTTC+AGG | - | chr7.1:16960934-16960953 | MS.gene38800:intron | 35.0% |
| ! | TTTTTGAATGATCAACCGTG+TGG | - | chr7.1:16961143-16961162 | MS.gene38800:intron | 35.0% |
| !! | GAAGTGAAGGTCTTATTAAG+TGG | - | chr7.1:16961381-16961400 | MS.gene38800:intron | 35.0% |
| !! | GGTGTTGCTTTAAACAAAGA+TGG | - | chr7.1:16961420-16961439 | MS.gene38800:intron | 35.0% |
| !! | GTTTTTGATAGTCATGGTGA+AGG | - | chr7.1:16958907-16958926 | MS.gene38800:CDS | 35.0% |
| !!! | TACTTGATTTTTGGTAGGGT+AGG | - | chr7.1:16959285-16959304 | MS.gene38800:intron | 35.0% |
| ATAGTGTTACCTATTGGAGC+TGG | + | chr7.1:16959010-16959029 | None:intergenic | 40.0% | |
| CAAAGCTTGGAAACTTCAAG+TGG | - | chr7.1:16961661-16961680 | MS.gene38800:CDS | 40.0% | |
| CTAACAAACATGGTGTGACA+CGG | - | chr7.1:16959708-16959727 | MS.gene38800:intron | 40.0% | |
| CTTCTTGGAACTGGACAAAT+TGG | - | chr7.1:16960425-16960444 | MS.gene38800:intron | 40.0% | |
| GAAGACATCCACTTTGCAAA+AGG | + | chr7.1:16961615-16961634 | None:intergenic | 40.0% | |
| GAAGTCTTGGAAGATTGTGA+AGG | - | chr7.1:16961753-16961772 | MS.gene38800:CDS | 40.0% | |
| GAATGGGAAGTGGTGAAAAA+GGG | + | chr7.1:16958816-16958835 | None:intergenic | 40.0% | |
| GCTATAAAGCTGAGTGATGA+AGG | - | chr7.1:16961720-16961739 | MS.gene38800:CDS | 40.0% | |
| GCTTTGATTGAAACTCTACC+TGG | - | chr7.1:16960296-16960315 | MS.gene38800:intron | 40.0% | |
| GTCTGATCTCCTAGAAAGTA+AGG | - | chr7.1:16960357-16960376 | MS.gene38800:intron | 40.0% | |
| GTCTTGAAATCGGAGATCAT+GGG | + | chr7.1:16959489-16959508 | None:intergenic | 40.0% | |
| GTTATTCTTCGATCCAGGAA+TGG | + | chr7.1:16958833-16958852 | None:intergenic | 40.0% | |
| GTTGAATGAGGTGAAGATGA+TGG | + | chr7.1:16958785-16958804 | None:intergenic | 40.0% | |
| TAAATACCCATGCACTCTAG+AGG | + | chr7.1:16959641-16959660 | None:intergenic | 40.0% | |
| TACTCTCTAATAGCAAGTCG+TGG | - | chr7.1:16959891-16959910 | MS.gene38800:CDS | 40.0% | |
| TCTCCTAGAAAGTAAGGTAC+TGG | - | chr7.1:16960363-16960382 | MS.gene38800:intron | 40.0% | |
| TCTTGGAACTGGACAAATTG+GGG | - | chr7.1:16960427-16960446 | MS.gene38800:intron | 40.0% | |
| TGGTTGCACTTCTCTTTAAG+TGG | - | chr7.1:16959331-16959350 | MS.gene38800:intron | 40.0% | |
| TGTCCAGTACCTTACTTTCT+AGG | + | chr7.1:16960369-16960388 | None:intergenic | 40.0% | |
| TGTCTTGAAATCGGAGATCA+TGG | + | chr7.1:16959490-16959509 | None:intergenic | 40.0% | |
| TTCACTGATGTCCATGTCAT+TGG | + | chr7.1:16960778-16960797 | None:intergenic | 40.0% | |
| TTCTTAGTGGAGACAAGACT+GGG | - | chr7.1:16961328-16961347 | MS.gene38800:intron | 40.0% | |
| ! | ACTTGAAGTGTTTGGTCTAG+TGG | + | chr7.1:16959530-16959549 | None:intergenic | 40.0% |
| !! | AGGGTTTTGTGAGTTGAATG+AGG | + | chr7.1:16958797-16958816 | None:intergenic | 40.0% |
| !! | GAACAGCAAAAGTATCGACT+TGG | + | chr7.1:16961518-16961537 | None:intergenic | 40.0% |
| !! | GGACGTAAATTTTAGTGGTG+AGG | + | chr7.1:16960855-16960874 | None:intergenic | 40.0% |
| !! | GGTAAAGCATTGTCAAAGCT+TGG | - | chr7.1:16961648-16961667 | MS.gene38800:CDS | 40.0% |
| !!! | AGATGGTCGGATTTTGAAGT+GGG | - | chr7.1:16958948-16958967 | MS.gene38800:CDS | 40.0% |
| !!! | GATACTTTTGCTGTTCTTCC+AGG | - | chr7.1:16961522-16961541 | MS.gene38800:intron | 40.0% |
| AACCGAGTCTCTTAAGCATG+TGG | - | chr7.1:16959797-16959816 | MS.gene38800:CDS | 45.0% | |
| AGCCACATGCTTAAGAGACT+CGG | + | chr7.1:16959802-16959821 | None:intergenic | 45.0% | |
| AGTCTCTTAAGCATGTGGCT+AGG | - | chr7.1:16959802-16959821 | MS.gene38800:CDS | 45.0% | |
| AGTGGATGTCTTCCAATCTG+TGG | - | chr7.1:16961622-16961641 | MS.gene38800:CDS | 45.0% | |
| CAGAATTGGAGCATGTTTGC+GGG | - | chr7.1:16960610-16960629 | MS.gene38800:intron | 45.0% | |
| CATTGGTGAAATGAAAGGGC+TGG | + | chr7.1:16960761-16960780 | None:intergenic | 45.0% | |
| CCAGAATTGGAGCATGTTTG+CGG | - | chr7.1:16960609-16960628 | MS.gene38800:intron | 45.0% | |
| CTGATTCAAGCACAGTCTAC+CGG | - | chr7.1:16960820-16960839 | MS.gene38800:intron | 45.0% | |
| CTTCTTAGTGGAGACAAGAC+TGG | - | chr7.1:16961327-16961346 | MS.gene38800:intron | 45.0% | |
| CTTGGAACTGGACAAATTGG+GGG | - | chr7.1:16960428-16960447 | MS.gene38800:intron | 45.0% | |
| GAAACTCTACCTGGCAAGTT+TGG | - | chr7.1:16960305-16960324 | MS.gene38800:intron | 45.0% | |
| GCATCCATTTGCACCAGAAT+TGG | - | chr7.1:16960596-16960615 | MS.gene38800:intron | 45.0% | |
| GGAATGGGAAGTGGTGAAAA+AGG | + | chr7.1:16958817-16958836 | None:intergenic | 45.0% | |
| GTCTCTTAAGCATGTGGCTA+GGG | - | chr7.1:16959803-16959822 | MS.gene38800:CDS | 45.0% | |
| GTGGATGTCTTCCAATCTGT+GGG | - | chr7.1:16961623-16961642 | MS.gene38800:CDS | 45.0% | |
| TACCTTGGCCTCAAAGTAGT+AGG | - | chr7.1:16960690-16960709 | MS.gene38800:intron | 45.0% | |
| TCAAAGTAGTAGGACCTGCA+GGG | - | chr7.1:16960700-16960719 | MS.gene38800:intron | 45.0% | |
| TCTCTTAAGCATGTGGCTAG+GGG | - | chr7.1:16959804-16959823 | MS.gene38800:CDS | 45.0% | |
| TGCTCCAATTCTGGTGCAAA+TGG | + | chr7.1:16960603-16960622 | None:intergenic | 45.0% | |
| TGGAGGTTATTCTTCGATCC+AGG | + | chr7.1:16958838-16958857 | None:intergenic | 45.0% | |
| TTCAGCTTCTGTTGCTACCT+GGG | + | chr7.1:16960736-16960755 | None:intergenic | 45.0% | |
| TTGGAACTGGACAAATTGGG+GGG | - | chr7.1:16960429-16960448 | MS.gene38800:intron | 45.0% | |
| ! | AGCTTTATAGCTGCAGCATG+AGG | + | chr7.1:16961711-16961730 | None:intergenic | 45.0% |
| ! | TTTTCACCACTTCCCATTCC+TGG | - | chr7.1:16958817-16958836 | MS.gene38800:CDS | 45.0% |
| !! | CAGATGGTCGGATTTTGAAG+TGG | - | chr7.1:16958947-16958966 | MS.gene38800:CDS | 45.0% |
| !! | GAAGGTGTTTCGGTGTACTA+AGG | - | chr7.1:16959455-16959474 | MS.gene38800:intron | 45.0% |
| !! | TACTACTTTGAGGCCAAGGT+AGG | + | chr7.1:16960691-16960710 | None:intergenic | 45.0% |
| !! | TTGCTTCCTCTAGAGTGCAT+GGG | - | chr7.1:16959632-16959651 | MS.gene38800:intron | 45.0% |
| !! | TTTGCTTCCTCTAGAGTGCA+TGG | - | chr7.1:16959631-16959650 | MS.gene38800:intron | 45.0% |
| AAAGTAGTAGGACCTGCAGG+GGG | - | chr7.1:16960702-16960721 | MS.gene38800:intron | 50.0% | |
| AAGTGGGAAGGAGAAGAACG+TGG | - | chr7.1:16958964-16958983 | MS.gene38800:CDS | 50.0% | |
| AATTGGAGCATGTTTGCGGG+AGG | - | chr7.1:16960613-16960632 | MS.gene38800:intron | 50.0% | |
| AGTGGTGAGGTTACCTTCTC+CGG | + | chr7.1:16960842-16960861 | None:intergenic | 50.0% | |
| ATGTCTTCCAATCTGTGGGC+TGG | - | chr7.1:16961627-16961646 | MS.gene38800:CDS | 50.0% | |
| CAAACATGGTGTGACACGGT+TGG | - | chr7.1:16959712-16959731 | MS.gene38800:intron | 50.0% | |
| CAAAGTAGTAGGACCTGCAG+GGG | - | chr7.1:16960701-16960720 | MS.gene38800:intron | 50.0% | |
| CAACACCGTTGGGAAAAGCA+AGG | + | chr7.1:16961407-16961426 | None:intergenic | 50.0% | |
| CAGCCTAGCTACACTACACT+AGG | + | chr7.1:16959373-16959392 | None:intergenic | 50.0% | |
| CAGGCTTTCCGGACAATGTA+AGG | - | chr7.1:16961541-16961560 | MS.gene38800:intron | 50.0% | |
| CAGGTAGCAACAGAAGCTGA+AGG | - | chr7.1:16960735-16960754 | MS.gene38800:intron | 50.0% | |
| CATGGTGAAGGTCCTTACAC+CGG | - | chr7.1:16958919-16958938 | MS.gene38800:CDS | 50.0% | |
| CCGCAAACATGCTCCAATTC+TGG | + | chr7.1:16960612-16960631 | None:intergenic | 50.0% | |
| CGTGGAGTAACTTAGCAGCA+TGG | + | chr7.1:16958858-16958877 | None:intergenic | 50.0% | |
| CTAACATGGTGTGACGCAGT+TGG | - | chr7.1:16959769-16959788 | MS.gene38800:CDS | 50.0% | |
| CTCAAAGTAGTAGGACCTGC+AGG | - | chr7.1:16960699-16960718 | MS.gene38800:intron | 50.0% | |
| CTGCAGGTCCTACTACTTTG+AGG | + | chr7.1:16960701-16960720 | None:intergenic | 50.0% | |
| CTTACATTGTCCGGAAAGCC+TGG | + | chr7.1:16961543-16961562 | None:intergenic | 50.0% | |
| CTTCAGCTTCTGTTGCTACC+TGG | + | chr7.1:16960737-16960756 | None:intergenic | 50.0% | |
| GAGCCTAGTGTAGTGTAGCT+AGG | - | chr7.1:16959367-16959386 | MS.gene38800:intron | 50.0% | |
| GCTAAGTTACTCCACGTCAC+CGG | - | chr7.1:16958862-16958881 | MS.gene38800:CDS | 50.0% | |
| GGAGTAACTTAGCAGCATGG+AGG | + | chr7.1:16958855-16958874 | None:intergenic | 50.0% | |
| GTCATCATGCCAAACTTGCC+AGG | + | chr7.1:16960317-16960336 | None:intergenic | 50.0% | |
| TAAGCATGTGGCTAGGGGAT+TGG | - | chr7.1:16959809-16959828 | MS.gene38800:CDS | 50.0% | |
| TACATTGCCGATGCCTACCT+TGG | - | chr7.1:16960675-16960694 | MS.gene38800:intron | 50.0% | |
| TAGCTGAAACTTCGACGTGC+AGG | - | chr7.1:16961457-16961476 | MS.gene38800:intron | 50.0% | |
| TGCTGTTCTTCCAGGCTTTC+CGG | - | chr7.1:16961530-16961549 | MS.gene38800:intron | 50.0% | |
| TGCTTTACCAGCCCACAGAT+TGG | + | chr7.1:16961637-16961656 | None:intergenic | 50.0% | |
| TTAGTGGAGACAAGACTGGG+AGG | - | chr7.1:16961331-16961350 | MS.gene38800:intron | 50.0% | |
| TTCGATCCAGGAATGGGAAG+TGG | + | chr7.1:16958826-16958845 | None:intergenic | 50.0% | |
| TTGCTGTCACCAGCTCCAAT+AGG | - | chr7.1:16958998-16959017 | MS.gene38800:CDS | 50.0% | |
| ! | TTTGAGGCCAAGGTAGGCAT+CGG | + | chr7.1:16960685-16960704 | None:intergenic | 50.0% |
| !! | AGGGTGAGTCGAAGGTGTTT+CGG | - | chr7.1:16959445-16959464 | MS.gene38800:intron | 50.0% |
| !! | AGGTACTGGACAGACAACTC+AGG | - | chr7.1:16960377-16960396 | MS.gene38800:intron | 50.0% |
| !! | AGTGGCCTTGCTTTTCCCAA+CGG | - | chr7.1:16961399-16961418 | MS.gene38800:intron | 50.0% |
| !! | GTCCTACTACTTTGAGGCCA+AGG | + | chr7.1:16960695-16960714 | None:intergenic | 50.0% |
| !!! | GGTCGGATTTTGAAGTGGGA+AGG | - | chr7.1:16958952-16958971 | MS.gene38800:CDS | 50.0% |
| !!! | GTATCGACTTGGCCAGCTTT+TGG | + | chr7.1:16961507-16961526 | None:intergenic | 50.0% |
| AATCCGACCATCTGCCACAC+CGG | + | chr7.1:16958941-16958960 | None:intergenic | 55.0% | |
| AGCTTCTGTTGCTACCTGGG+TGG | + | chr7.1:16960733-16960752 | None:intergenic | 55.0% | |
| CAAGCACAGTCTACCGGAGA+AGG | - | chr7.1:16960826-16960845 | MS.gene38800:intron | 55.0% | |
| CAAGTGGTTGCATGCGTCGT+TGG | - | chr7.1:16961677-16961696 | MS.gene38800:CDS | 55.0% | |
| CATGGTGTGACGCAGTTGGT+AGG | - | chr7.1:16959773-16959792 | MS.gene38800:CDS | 55.0% | |
| CTTCGACGTGCAGGATTCTG+AGG | - | chr7.1:16961466-16961485 | MS.gene38800:intron | 55.0% | |
| GGGAAGGAGAAGAACGTGGT+TGG | - | chr7.1:16958968-16958987 | MS.gene38800:CDS | 55.0% | |
| TGAAGGTCCTTACACCGGTG+TGG | - | chr7.1:16958924-16958943 | MS.gene38800:CDS | 55.0% | |
| TGGCTTCGTGGACCAAAAGC+TGG | - | chr7.1:16961492-16961511 | MS.gene38800:intron | 55.0% | |
| !! | ATTCTGAGGCTCTGGCTTCG+TGG | - | chr7.1:16961480-16961499 | MS.gene38800:intron | 55.0% |
| AACAAGACTCTCCGGCCCGA+CGG | + | chr7.1:16958890-16958909 | None:intergenic | 60.0% | |
| ACACCGGTGTGGCAGATGGT+CGG | - | chr7.1:16958935-16958954 | MS.gene38800:CDS | 60.0% | |
| AGTAGGACCTGCAGGGGGTT+TGG | - | chr7.1:16960707-16960726 | MS.gene38800:intron | 60.0% | |
| CCATCTGCCACACCGGTGTA+AGG | + | chr7.1:16958934-16958953 | None:intergenic | 60.0% | |
| CCTTACACCGGTGTGGCAGA+TGG | - | chr7.1:16958931-16958950 | MS.gene38800:CDS | 60.0% | |
| ! | GGGGGCATGAGACTGTCCTT+AGG | - | chr7.1:16960447-16960466 | MS.gene38800:intron | 60.0% |
| !! | CGTGCAGGATTCTGAGGCTC+TGG | - | chr7.1:16961472-16961491 | MS.gene38800:intron | 60.0% |
| !! | GTGGCTAGGGGATTGGTCCT+AGG | - | chr7.1:16959816-16959835 | MS.gene38800:CDS | 60.0% |
| CATGTTTGCGGGAGGCCGCT+AGG | - | chr7.1:16960621-16960640 | MS.gene38800:intron | 65.0% | |
| CTCCACGTCACCGGAGCCGT+CGG | - | chr7.1:16958871-16958890 | MS.gene38800:CDS | 70.0% | |
| TCCACGTCACCGGAGCCGTC+GGG | - | chr7.1:16958872-16958891 | MS.gene38800:CDS | 70.0% | |
| TGCAGGGGGTTTGGCCACCC+AGG | - | chr7.1:16960716-16960735 | MS.gene38800:intron | 70.0% | |
| TGGGTGGCCAAACCCCCTGC+AGG | + | chr7.1:16960717-16960736 | None:intergenic | 70.0% | |
| ACTCTCCGGCCCGACGGCTC+CGG | + | chr7.1:16958884-16958903 | None:intergenic | 75.0% | |
| ! | CGTCACCGGAGCCGTCGGGC+CGG | - | chr7.1:16958876-16958895 | MS.gene38800:CDS | 80.0% |
| ! | GCCCGACGGCTCCGGTGACG+TGG | + | chr7.1:16958876-16958895 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 16958736 | 16961872 | 16958736 | ID=MS.gene38800 |
| chr7.1 | mRNA | 16958736 | 16961872 | 16958736 | ID=MS.gene38800.t1;Parent=MS.gene38800 |
| chr7.1 | exon | 16961589 | 16961872 | 16961589 | ID=MS.gene38800.t1.exon1;Parent=MS.gene38800.t1 |
| chr7.1 | CDS | 16961589 | 16961872 | 16961589 | ID=cds.MS.gene38800.t1;Parent=MS.gene38800.t1 |
| chr7.1 | exon | 16959761 | 16960024 | 16959761 | ID=MS.gene38800.t1.exon2;Parent=MS.gene38800.t1 |
| chr7.1 | CDS | 16959761 | 16960024 | 16959761 | ID=cds.MS.gene38800.t1;Parent=MS.gene38800.t1 |
| chr7.1 | exon | 16958736 | 16959297 | 16958736 | ID=MS.gene38800.t1.exon3;Parent=MS.gene38800.t1 |
| chr7.1 | CDS | 16958736 | 16959297 | 16958736 | ID=cds.MS.gene38800.t1;Parent=MS.gene38800.t1 |
| Gene Sequence |
| Protein sequence |
