Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38801.t1 | XP_003625040.2 | 86.2 | 369 | 24 | 1 | 1 | 342 | 1 | 369 | 1.40E-178 | 635.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38801.t1 | Q4V3D9 | 57.8 | 358 | 122 | 3 | 14 | 342 | 17 | 374 | 4.7e-111 | 402.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38801.t1 | G7KRN9 | 86.2 | 369 | 24 | 1 | 1 | 342 | 1 | 369 | 9.8e-179 | 635.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene35719 | MS.gene38801 | PPI |
| MS.gene034366 | MS.gene38801 | PPI |
| MS.gene38801 | MS.gene61630 | PPI |
| MS.gene059296 | MS.gene38801 | PPI |
| MS.gene66625 | MS.gene38801 | PPI |
| MS.gene061292 | MS.gene38801 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38801.t1 | MTR_7g090300 | 86.179 | 369 | 24 | 1 | 1 | 342 | 1 | 369 | 0.0 | 644 |
| MS.gene38801.t1 | MTR_7g490350 | 82.656 | 369 | 37 | 1 | 1 | 342 | 1 | 369 | 0.0 | 619 |
| MS.gene38801.t1 | MTR_5g091980 | 65.110 | 364 | 53 | 4 | 6 | 342 | 7 | 323 | 1.08e-160 | 452 |
| MS.gene38801.t1 | MTR_7g490330 | 62.703 | 370 | 65 | 5 | 1 | 342 | 1 | 325 | 7.20e-156 | 440 |
| MS.gene38801.t1 | MTR_2g087780 | 49.288 | 351 | 138 | 6 | 29 | 342 | 48 | 395 | 4.70e-101 | 303 |
| MS.gene38801.t1 | MTR_4g050190 | 47.443 | 352 | 142 | 8 | 29 | 342 | 45 | 391 | 2.22e-97 | 294 |
| MS.gene38801.t1 | MTR_7g090310 | 38.243 | 387 | 191 | 8 | 1 | 341 | 1 | 385 | 6.31e-89 | 272 |
| MS.gene38801.t1 | MTR_2g099030 | 44.970 | 338 | 148 | 5 | 36 | 337 | 66 | 401 | 2.37e-87 | 268 |
| MS.gene38801.t1 | MTR_7g090320 | 42.216 | 334 | 149 | 7 | 50 | 341 | 55 | 386 | 1.50e-86 | 266 |
| MS.gene38801.t1 | MTR_4g112670 | 35.423 | 319 | 152 | 5 | 53 | 340 | 39 | 334 | 1.10e-58 | 192 |
| MS.gene38801.t1 | MTR_4g112620 | 35.959 | 292 | 151 | 3 | 53 | 341 | 42 | 300 | 5.13e-57 | 187 |
| MS.gene38801.t1 | MTR_4g112630 | 34.877 | 324 | 142 | 6 | 52 | 341 | 37 | 325 | 6.16e-56 | 185 |
| MS.gene38801.t1 | MTR_2g058450 | 36.223 | 323 | 149 | 6 | 52 | 342 | 39 | 336 | 1.35e-54 | 182 |
| MS.gene38801.t1 | MTR_4g112650 | 35.535 | 318 | 145 | 7 | 53 | 336 | 38 | 329 | 3.22e-54 | 181 |
| MS.gene38801.t1 | MTR_2g058410 | 31.102 | 254 | 123 | 4 | 114 | 339 | 1 | 230 | 1.84e-29 | 113 |
| MS.gene38801.t1 | MTR_8g074270 | 29.396 | 364 | 196 | 14 | 5 | 337 | 28 | 361 | 1.86e-25 | 105 |
| MS.gene38801.t1 | MTR_8g074210 | 27.907 | 344 | 178 | 12 | 29 | 337 | 53 | 361 | 9.68e-24 | 100 |
| MS.gene38801.t1 | MTR_8g074170 | 29.866 | 298 | 157 | 9 | 5 | 272 | 28 | 303 | 4.08e-23 | 99.0 |
| MS.gene38801.t1 | MTR_0003s0530 | 33.333 | 123 | 55 | 1 | 158 | 253 | 2 | 124 | 1.99e-17 | 80.1 |
| MS.gene38801.t1 | MTR_2g042370 | 26.415 | 318 | 180 | 11 | 54 | 342 | 65 | 357 | 2.09e-15 | 76.6 |
| MS.gene38801.t1 | MTR_2g042420 | 23.514 | 370 | 229 | 11 | 2 | 342 | 5 | 349 | 1.20e-14 | 74.3 |
| MS.gene38801.t1 | MTR_2g058430 | 44.304 | 79 | 44 | 0 | 105 | 183 | 52 | 130 | 2.21e-14 | 72.8 |
| MS.gene38801.t1 | MTR_2g042430 | 24.281 | 313 | 184 | 9 | 54 | 338 | 77 | 364 | 4.88e-14 | 72.8 |
| MS.gene38801.t1 | MTR_4g112840 | 44.643 | 56 | 31 | 0 | 198 | 253 | 97 | 152 | 9.58e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene38801.t1 | AT3G57030 | 58.056 | 360 | 121 | 4 | 13 | 342 | 15 | 374 | 1.34e-141 | 405 |
| MS.gene38801.t1 | AT1G08470 | 49.853 | 341 | 132 | 6 | 37 | 342 | 53 | 389 | 2.18e-102 | 306 |
| MS.gene38801.t1 | AT5G22020 | 48.105 | 343 | 137 | 6 | 36 | 342 | 58 | 395 | 1.34e-101 | 305 |
| MS.gene38801.t1 | AT5G22020 | 48.105 | 343 | 137 | 6 | 36 | 342 | 58 | 395 | 1.34e-101 | 305 |
| MS.gene38801.t1 | AT5G22020 | 48.105 | 343 | 137 | 6 | 36 | 342 | 58 | 395 | 1.34e-101 | 305 |
| MS.gene38801.t1 | AT2G41290 | 46.131 | 336 | 143 | 7 | 44 | 342 | 42 | 376 | 2.68e-91 | 278 |
| MS.gene38801.t1 | AT3G57010 | 43.243 | 370 | 166 | 9 | 3 | 339 | 9 | 367 | 1.96e-89 | 273 |
| MS.gene38801.t1 | AT3G57020 | 42.005 | 369 | 179 | 7 | 1 | 339 | 3 | 366 | 2.84e-89 | 272 |
| MS.gene38801.t1 | AT2G41300 | 46.774 | 310 | 133 | 4 | 59 | 339 | 84 | 390 | 4.28e-89 | 273 |
| MS.gene38801.t1 | AT3G57020 | 40.650 | 369 | 170 | 7 | 1 | 339 | 3 | 352 | 1.29e-82 | 255 |
| MS.gene38801.t1 | AT3G59530 | 43.871 | 310 | 137 | 5 | 43 | 316 | 74 | 382 | 2.77e-79 | 248 |
| MS.gene38801.t1 | AT3G59530 | 43.871 | 310 | 137 | 5 | 43 | 316 | 74 | 382 | 2.77e-79 | 248 |
| MS.gene38801.t1 | AT3G59530 | 43.871 | 310 | 137 | 5 | 43 | 316 | 74 | 382 | 2.77e-79 | 248 |
| MS.gene38801.t1 | AT1G74020 | 34.783 | 322 | 146 | 9 | 53 | 342 | 38 | 327 | 5.28e-49 | 167 |
| MS.gene38801.t1 | AT1G74010 | 34.783 | 322 | 145 | 10 | 53 | 342 | 37 | 325 | 6.42e-48 | 164 |
| MS.gene38801.t1 | AT1G74000 | 32.092 | 349 | 155 | 11 | 28 | 342 | 29 | 329 | 4.57e-46 | 159 |
| MS.gene38801.t1 | AT3G51430 | 26.275 | 255 | 141 | 7 | 29 | 255 | 45 | 280 | 1.30e-15 | 77.4 |
| MS.gene38801.t1 | AT3G51430 | 26.482 | 253 | 139 | 7 | 29 | 253 | 45 | 278 | 2.10e-15 | 77.0 |
Find 86 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATTCAGAAGGGCAGTTT+TGG | 0.258450 | 7.1:-16948880 | MS.gene38801:CDS |
| ATTCTGAGGCTTTGGCTTCA+TGG | 0.293429 | 7.1:-16948965 | MS.gene38801:CDS |
| TAGCCGAAACCTCGATTTGC+AGG | 0.307660 | 7.1:-16948988 | MS.gene38801:CDS |
| TCTTCCCTTCACAATCTTCC+AGG | 0.315508 | 7.1:+16948687 | None:intergenic |
| GAAGACAGCCACTTCGTAAA+AGG | 0.316670 | 7.1:+16948833 | None:intergenic |
| CTTCGTAAAAGGAGTTGTTT+TGG | 0.345430 | 7.1:+16948844 | None:intergenic |
| AGTGGCTGTCTTCTAATCTC+TGG | 0.360196 | 7.1:-16948823 | MS.gene38801:CDS |
| TTTGCAGGATTCTGAGGCTT+TGG | 0.376258 | 7.1:-16948973 | MS.gene38801:CDS |
| CAAGTGGTTGCAAGCGTTGT+TGG | 0.382457 | 7.1:-16948768 | MS.gene38801:CDS |
| GAATTTCTCCTTATATTGTC+TGG | 0.384336 | 7.1:+16948896 | None:intergenic |
| CATATGCTTGTAACTCTTAG+TGG | 0.400896 | 7.1:-16949131 | MS.gene38801:CDS |
| CTTTCACTTCACCAATGACT+TGG | 0.405228 | 7.1:-16950061 | MS.gene38801:CDS |
| AATCCTGCAAATCGAGGTTT+CGG | 0.418573 | 7.1:+16948985 | None:intergenic |
| TGGAGATTGTTCTTCGATCC+AGG | 0.431006 | 7.1:+16951879 | None:intergenic |
| TTCACTGATGTCCAAGTCAT+TGG | 0.437367 | 7.1:+16950050 | None:intergenic |
| CCGGAGTTGGAGCATATTTG+TGG | 0.445967 | 7.1:-16950216 | MS.gene38801:CDS |
| GTATCGACTTGGCCAACATT+AGG | 0.446245 | 7.1:+16948941 | None:intergenic |
| TGGCTTCATGGACCTAATGT+TGG | 0.454561 | 7.1:-16948953 | MS.gene38801:CDS |
| GGTGTTGCTTTAAGCAAAGA+TGG | 0.456261 | 7.1:-16949025 | MS.gene38801:intron |
| CTCAACGTAGTAGGACCTGC+AGG | 0.457150 | 7.1:-16950126 | MS.gene38801:CDS |
| GCTATAAAGCTTAGTGATGA+AGG | 0.459554 | 7.1:-16948725 | MS.gene38801:CDS |
| GCATCCATTCGCACCGGAGT+TGG | 0.459769 | 7.1:-16950229 | MS.gene38801:CDS |
| ACTCTCCGGCCCAACGGCTC+CGG | 0.460954 | 7.1:+16951833 | None:intergenic |
| CTTATATTGTCTGGAAAACC+TGG | 0.462558 | 7.1:+16948905 | None:intergenic |
| CCTCGATTTGCAGGATTCTG+AGG | 0.468038 | 7.1:-16948979 | MS.gene38801:CDS |
| TATATTGCTGATGCCTACCT+TGG | 0.468786 | 7.1:-16950150 | MS.gene38801:CDS |
| TTGTTCTTCGATCCAGGAAT+GGG | 0.472280 | 7.1:+16951885 | None:intergenic |
| CCATCTGCCACGCCGGTGTA+CGG | 0.474956 | 7.1:+16951783 | None:intergenic |
| CATATTTGTGGGAGGCCACT+AGG | 0.476270 | 7.1:-16950204 | MS.gene38801:CDS |
| AAGAGAAAGATGGAAAACTT+TGG | 0.476666 | 7.1:-16948640 | MS.gene38801:CDS |
| TGCTCCAACTCCGGTGCGAA+TGG | 0.479567 | 7.1:+16950225 | None:intergenic |
| AGGGGAAATATTAGAAAGCC+TGG | 0.482098 | 7.1:-16948705 | MS.gene38801:CDS |
| TTGCTGTCACCAGCTCCAAT+AGG | 0.491349 | 7.1:-16951716 | MS.gene38801:intron |
| AAACTATAAACACCAATGTA+AGG | 0.492649 | 7.1:+16948599 | None:intergenic |
| CGTCACCGGAGCCGTTGGGC+CGG | 0.493433 | 7.1:-16951838 | MS.gene38801:CDS |
| CAAGTCATTGGTGAAGTGAA+AGG | 0.503899 | 7.1:+16950062 | None:intergenic |
| CCGTACACCGGCGTGGCAGA+TGG | 0.505779 | 7.1:-16951783 | MS.gene38801:CDS |
| ATTGTTCTTCGATCCAGGAA+TGG | 0.509739 | 7.1:+16951884 | None:intergenic |
| GTCCTACTACGTTGAGGCCA+AGG | 0.514500 | 7.1:+16950133 | None:intergenic |
| TAAACGTCACCGGAGCCGTT+GGG | 0.514621 | 7.1:-16951842 | MS.gene38801:CDS |
| CGGAGTTGGAGCATATTTGT+GGG | 0.523044 | 7.1:-16950215 | MS.gene38801:CDS |
| GTGGCTGTCTTCTAATCTCT+GGG | 0.525571 | 7.1:-16948822 | MS.gene38801:CDS |
| ATTGAATGAGGTGAAGATAA+TGG | 0.526335 | 7.1:+16951932 | None:intergenic |
| ACTCTTAGTGGAGACAAGAC+TGG | 0.538861 | 7.1:-16949119 | MS.gene38801:CDS |
| AGTGAAGTGGAAGAGAAAGA+TGG | 0.540337 | 7.1:-16948650 | MS.gene38801:CDS |
| TTACTATTACCTATTGGAGC+TGG | 0.543376 | 7.1:+16951707 | None:intergenic |
| AGCTTTATAGCTGCAGCATG+AGG | 0.546326 | 7.1:+16948737 | None:intergenic |
| TTACTTTACTGATTCAAGCT+CGG | 0.547514 | 7.1:-16950013 | MS.gene38801:CDS |
| GAAAGATGGAAAACTTTGGA+TGG | 0.549433 | 7.1:-16948636 | MS.gene38801:CDS |
| ATTGAAGTTCATCAGTGAAG+TGG | 0.549801 | 7.1:-16948663 | MS.gene38801:CDS |
| CCACAAATATGCTCCAACTC+CGG | 0.552196 | 7.1:+16950216 | None:intergenic |
| AAGTCATTGGTGAAGTGAAA+GGG | 0.553850 | 7.1:+16950063 | None:intergenic |
| CAAGCTCGGTTTATCAGAGA+AGG | 0.556972 | 7.1:-16949999 | MS.gene38801:intron |
| TTATCAAACTTTAGTCCTAG+TGG | 0.560456 | 7.1:+16950189 | None:intergenic |
| TACCTTGGCCTCAACGTAGT+AGG | 0.560487 | 7.1:-16950135 | MS.gene38801:CDS |
| CTAAACGTCACCGGAGCCGT+TGG | 0.562202 | 7.1:-16951843 | MS.gene38801:CDS |
| CATTGGTGAAGTGAAAGGGC+TGG | 0.575428 | 7.1:+16950067 | None:intergenic |
| GGGAAGGAGAGGAACGTGGT+TGG | 0.580741 | 7.1:-16951746 | MS.gene38801:CDS |
| CTATAAAGCTTAGTGATGAA+GGG | 0.581070 | 7.1:-16948724 | MS.gene38801:CDS |
| AATGGTGATGGGCCGTACAC+CGG | 0.584400 | 7.1:-16951795 | MS.gene38801:CDS |
| TATAAAGCTTAGTGATGAAG+GGG | 0.587640 | 7.1:-16948723 | MS.gene38801:CDS |
| GAACAGCAAAAGTATCGACT+TGG | 0.589428 | 7.1:+16948930 | None:intergenic |
| TCAACGTAGTAGGACCTGCA+GGG | 0.589630 | 7.1:-16950125 | MS.gene38801:CDS |
| AAATGGGAAGGAGAGGAACG+TGG | 0.596866 | 7.1:-16951750 | MS.gene38801:CDS |
| CGTTTAGTAACTTAGCAGCA+TGG | 0.599980 | 7.1:+16951859 | None:intergenic |
| AATATAAGGAGAAATTCAGA+AGG | 0.602446 | 7.1:-16948890 | MS.gene38801:CDS |
| GAAAGCCTGGAAGATTGTGA+AGG | 0.604737 | 7.1:-16948692 | MS.gene38801:CDS |
| TAAAGCTTAGAAACTTCAAG+TGG | 0.607239 | 7.1:-16948784 | MS.gene38801:CDS |
| AATCCGACCATCTGCCACGC+CGG | 0.611385 | 7.1:+16951776 | None:intergenic |
| CTGTGTGCATCCATTCGCAC+CGG | 0.622551 | 7.1:-16950235 | MS.gene38801:CDS |
| AGCTTCTGTTGCTAACTGAG+TGG | 0.625543 | 7.1:+16950095 | None:intergenic |
| ACACCGGCGTGGCAGATGGT+CGG | 0.631629 | 7.1:-16951779 | MS.gene38801:CDS |
| AACAAGACTCTCCGGCCCAA+CGG | 0.631984 | 7.1:+16951827 | None:intergenic |
| CCTCAGAATCCTGCAAATCG+AGG | 0.632523 | 7.1:+16948979 | None:intergenic |
| TCAGTGTTAATGCCTTACAT+TGG | 0.635695 | 7.1:-16948611 | MS.gene38801:CDS |
| TCAGTTAGCAACAGAAGCTG+AGG | 0.644419 | 7.1:-16950091 | MS.gene38801:CDS |
| GCTAAGTTACTAAACGTCAC+CGG | 0.644658 | 7.1:-16951852 | MS.gene38801:CDS |
| AAAGCCTGGAAGATTGTGAA+GGG | 0.647318 | 7.1:-16948691 | MS.gene38801:CDS |
| CTGCAGGTCCTACTACGTTG+AGG | 0.648457 | 7.1:+16950127 | None:intergenic |
| AGTTGGAGCATATTTGTGGG+AGG | 0.655784 | 7.1:-16950212 | MS.gene38801:CDS |
| CAACGTAGTAGGACCTGCAG+GGG | 0.658456 | 7.1:-16950124 | MS.gene38801:CDS |
| TACTACGTTGAGGCCAAGGT+AGG | 0.666763 | 7.1:+16950137 | None:intergenic |
| TGATGGGCCGTACACCGGCG+TGG | 0.683753 | 7.1:-16951790 | MS.gene38801:CDS |
| TTAGTGGAGACAAGACTGGA+CGG | 0.686980 | 7.1:-16949115 | MS.gene38801:intron |
| ATATAAGGAGAAATTCAGAA+GGG | 0.701748 | 7.1:-16948889 | MS.gene38801:CDS |
| AACGTAGTAGGACCTGCAGG+GGG | 0.739860 | 7.1:-16950123 | MS.gene38801:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAATAATTAATAGTAG+TGG | + | chr7.1:16949229-16949248 | None:intergenic | 10.0% |
| !!! | TTAAAGTGTTAAATTAAAAT+TGG | + | chr7.1:16949082-16949101 | None:intergenic | 10.0% |
| !! | AAAATTATTTGTTTACTCAT+TGG | - | chr7.1:16948916-16948935 | MS.gene38801:CDS | 15.0% |
| !! | AGTATACATTTATTAAAACA+TGG | + | chr7.1:16949667-16949686 | None:intergenic | 15.0% |
| !!! | AAACAAATAATTTTAAAACC+TGG | + | chr7.1:16948910-16948929 | None:intergenic | 15.0% |
| !!! | GTAATAGTAATATTCATTTT+GGG | - | chr7.1:16948879-16948898 | MS.gene38801:CDS | 15.0% |
| !!! | TTCTTTATTTAGTTTATGTT+TGG | - | chr7.1:16949007-16949026 | MS.gene38801:CDS | 15.0% |
| !! | AAAACCATTATCCAATTAAA+TGG | + | chr7.1:16949403-16949422 | None:intergenic | 20.0% |
| !! | AAAGTTAACAAATCTTTAGT+TGG | + | chr7.1:16950904-16950923 | None:intergenic | 20.0% |
| !! | AAGTTAACAAATCTTTAGTT+GGG | + | chr7.1:16950903-16950922 | None:intergenic | 20.0% |
| !! | ACAACATAAATAAAGTCATT+GGG | + | chr7.1:16950986-16951005 | None:intergenic | 20.0% |
| !! | ACAGTTGATTATAGAAAAAT+AGG | + | chr7.1:16950621-16950640 | None:intergenic | 20.0% |
| !! | ATCACCTACAAAATTATTAA+TGG | - | chr7.1:16949472-16949491 | MS.gene38801:intron | 20.0% |
| !! | CTAAAGTTTGATAAGAAAAA+TGG | - | chr7.1:16950393-16950412 | MS.gene38801:intron | 20.0% |
| !! | CTCTTTAGTGTATTAAAATA+CGG | + | chr7.1:16949894-16949913 | None:intergenic | 20.0% |
| !! | TCAAAATCCTCTATATTTAA+TGG | - | chr7.1:16949108-16949127 | MS.gene38801:intron | 20.0% |
| !! | TCACCTACAAAATTATTAAT+GGG | - | chr7.1:16949473-16949492 | MS.gene38801:intron | 20.0% |
| !! | TGAATATTACTATTACCTAT+TGG | + | chr7.1:16948875-16948894 | None:intergenic | 20.0% |
| !! | TGTAAATTATGTTTCTTCAA+GGG | + | chr7.1:16949945-16949964 | None:intergenic | 20.0% |
| !!! | AATAATTTTGTAGGTGATAA+AGG | + | chr7.1:16949470-16949489 | None:intergenic | 20.0% |
| !!! | AGAAATTTTGATCTATATGT+TGG | - | chr7.1:16951399-16951418 | MS.gene38801:intron | 20.0% |
| !!! | GGTAATAGTAATATTCATTT+TGG | - | chr7.1:16948878-16948897 | MS.gene38801:CDS | 20.0% |
| !!! | TTTTAATACACTAAAGAGTT+AGG | - | chr7.1:16949896-16949915 | MS.gene38801:intron | 20.0% |
| ! | AAACTATAAACACCAATGTA+AGG | + | chr7.1:16951977-16951996 | None:intergenic | 25.0% |
| ! | AAGTGTTAACTTAAAACTAG+AGG | + | chr7.1:16951105-16951124 | None:intergenic | 25.0% |
| ! | AATATAAGGAGAAATTCAGA+AGG | - | chr7.1:16951683-16951702 | MS.gene38801:intron | 25.0% |
| ! | AATCAAAACTAAATGCTTGA+TGG | - | chr7.1:16951236-16951255 | MS.gene38801:intron | 25.0% |
| ! | AGTGTTAACTTAAAACTAGA+GGG | + | chr7.1:16951104-16951123 | None:intergenic | 25.0% |
| ! | ATATAAGGAGAAATTCAGAA+GGG | - | chr7.1:16951684-16951703 | MS.gene38801:intron | 25.0% |
| ! | ATCTTTACTTAATTGTTGGT+AGG | - | chr7.1:16949345-16949364 | MS.gene38801:intron | 25.0% |
| ! | ATGGTAAATTATGTTGTATG+AGG | - | chr7.1:16951175-16951194 | MS.gene38801:intron | 25.0% |
| ! | CACAACATAAATAAAGTCAT+TGG | + | chr7.1:16950987-16951006 | None:intergenic | 25.0% |
| ! | CACCTACAAAATTATTAATG+GGG | - | chr7.1:16949474-16949493 | MS.gene38801:intron | 25.0% |
| ! | CATAATTTACCATTCCAAAA+CGG | + | chr7.1:16951168-16951187 | None:intergenic | 25.0% |
| ! | CTGTAAATTATGTTTCTTCA+AGG | + | chr7.1:16949946-16949965 | None:intergenic | 25.0% |
| ! | GAGAATCTTTACTTAATTGT+TGG | - | chr7.1:16949341-16949360 | MS.gene38801:intron | 25.0% |
| ! | GGTTGAAGAAAATAATATCA+AGG | - | chr7.1:16951257-16951276 | MS.gene38801:intron | 25.0% |
| ! | TAAATCGACAAAAGAAGTAA+AGG | - | chr7.1:16951495-16951514 | MS.gene38801:intron | 25.0% |
| ! | TAATCATAACAGAAATCAAC+AGG | + | chr7.1:16951134-16951153 | None:intergenic | 25.0% |
| ! | TCTTTACTTAATTGTTGGTA+GGG | - | chr7.1:16949346-16949365 | MS.gene38801:intron | 25.0% |
| ! | TGAATTTATCACTCTCTAAA+TGG | + | chr7.1:16949140-16949159 | None:intergenic | 25.0% |
| ! | TGGCATTCAAACAAAATAAT+CGG | + | chr7.1:16950238-16950257 | None:intergenic | 25.0% |
| ! | TGGTAAATTATGTTGTATGA+GGG | - | chr7.1:16951176-16951195 | MS.gene38801:intron | 25.0% |
| ! | TTAGATTTGAACATACTTCT+CGG | - | chr7.1:16948964-16948983 | MS.gene38801:CDS | 25.0% |
| ! | TTTCGCATTTGTAACATTAA+TGG | + | chr7.1:16950782-16950801 | None:intergenic | 25.0% |
| !! | CTTACTCTTTTTATACCATA+GGG | - | chr7.1:16949570-16949589 | MS.gene38801:intron | 25.0% |
| !! | TTTCACAATTTAGAATCAGA+AGG | + | chr7.1:16950115-16950134 | None:intergenic | 25.0% |
| !!! | AATGTTGTTTTACACGAAAA+TGG | - | chr7.1:16950800-16950819 | MS.gene38801:intron | 25.0% |
| !!! | ACAAGATTGCTTTGTTTTTA+CGG | + | chr7.1:16950928-16950947 | None:intergenic | 25.0% |
| !!! | AGTCTTGTTTTTGATAGTAA+TGG | - | chr7.1:16948760-16948779 | MS.gene38801:CDS | 25.0% |
| !!! | ATTTTGTTGTATGATTTGCA+AGG | - | chr7.1:16950310-16950329 | MS.gene38801:intron | 25.0% |
| !!! | TAGTTTTACTCTAAACAACA+TGG | - | chr7.1:16949687-16949706 | MS.gene38801:intron | 25.0% |
| !!! | TTTTTGATAGTAATGGTGAT+GGG | - | chr7.1:16948767-16948786 | MS.gene38801:CDS | 25.0% |
| AACACCATTGGGAAAAAAAA+AGG | + | chr7.1:16951534-16951553 | None:intergenic | 30.0% | |
| AAGAGAAAGATGGAAAACTT+TGG | - | chr7.1:16951933-16951952 | MS.gene38801:CDS | 30.0% | |
| AATTAAGTCTCTTAAGCATC+TGG | - | chr7.1:16949729-16949748 | MS.gene38801:intron | 30.0% | |
| ACAGACAAATATTATCATGC+TGG | + | chr7.1:16951336-16951355 | None:intergenic | 30.0% | |
| ACCAACAAATATGCAGTTTA+TGG | - | chr7.1:16949989-16950008 | MS.gene38801:intron | 30.0% | |
| ACCACCATTTAATTGGATAA+TGG | - | chr7.1:16949396-16949415 | MS.gene38801:intron | 30.0% | |
| ACCATTATCCAATTAAATGG+TGG | + | chr7.1:16949400-16949419 | None:intergenic | 30.0% | |
| ATTGAATGAGGTGAAGATAA+TGG | + | chr7.1:16948644-16948663 | None:intergenic | 30.0% | |
| CCTATGGTATAAAAAGAGTA+AGG | + | chr7.1:16949572-16949591 | None:intergenic | 30.0% | |
| CTAAACAACATGGTATGATA+CGG | - | chr7.1:16949697-16949716 | MS.gene38801:intron | 30.0% | |
| CTATAAAGCTTAGTGATGAA+GGG | - | chr7.1:16951849-16951868 | MS.gene38801:CDS | 30.0% | |
| GAATAATTAGCTCACAACAT+TGG | + | chr7.1:16949923-16949942 | None:intergenic | 30.0% | |
| GAATTTCTCCTTATATTGTC+TGG | + | chr7.1:16951680-16951699 | None:intergenic | 30.0% | |
| GTAGCTTCCATTAAATATAG+AGG | + | chr7.1:16949118-16949137 | None:intergenic | 30.0% | |
| GTGTTAACTTAAAACTAGAG+GGG | + | chr7.1:16951103-16951122 | None:intergenic | 30.0% | |
| TAAAACTCAAGAAATCCCTA+TGG | + | chr7.1:16949588-16949607 | None:intergenic | 30.0% | |
| TAAAGCTTAGAAACTTCAAG+TGG | - | chr7.1:16951789-16951808 | MS.gene38801:CDS | 30.0% | |
| TATAAAGCTTAGTGATGAAG+GGG | - | chr7.1:16951850-16951869 | MS.gene38801:CDS | 30.0% | |
| TATGAGTTAGAGTTATGTCA+TGG | + | chr7.1:16950258-16950277 | None:intergenic | 30.0% | |
| TCCATAAACTGCATATTTGT+TGG | + | chr7.1:16949993-16950012 | None:intergenic | 30.0% | |
| TGATCTAATGATGAAAAGAC+AGG | + | chr7.1:16949535-16949554 | None:intergenic | 30.0% | |
| TGTTAACTTAAAACTAGAGG+GGG | + | chr7.1:16951102-16951121 | None:intergenic | 30.0% | |
| TTAAGTAAAGATTCTCTCCA+TGG | + | chr7.1:16949337-16949356 | None:intergenic | 30.0% | |
| TTATCAAACTTTAGTCCTAG+TGG | + | chr7.1:16950387-16950406 | None:intergenic | 30.0% | |
| TTATCTCTAGATAGACGAAA+TGG | - | chr7.1:16949272-16949291 | MS.gene38801:intron | 30.0% | |
| ! | ACTGCTGAAAAGAAATTTTG+TGG | + | chr7.1:16948667-16948686 | None:intergenic | 30.0% |
| ! | AGCCCCATTAATAATTTTGT+AGG | + | chr7.1:16949479-16949498 | None:intergenic | 30.0% |
| ! | CCTTACTCTTTTTATACCAT+AGG | - | chr7.1:16949569-16949588 | MS.gene38801:intron | 30.0% |
| ! | GAAAATTGTGCTATTCTCTT+AGG | - | chr7.1:16951279-16951298 | MS.gene38801:intron | 30.0% |
| ! | TAACTCGTCGAAGTATTTAA+GGG | + | chr7.1:16949805-16949824 | None:intergenic | 30.0% |
| !! | GAAAAATAGGTGTTGTTTAG+TGG | + | chr7.1:16950608-16950627 | None:intergenic | 30.0% |
| !! | GAAATTTTGTGGATTGAATG+AGG | + | chr7.1:16948656-16948675 | None:intergenic | 30.0% |
| !! | GAAGTAAAGGTGTTATTAAG+TGG | - | chr7.1:16951508-16951527 | MS.gene38801:intron | 30.0% |
| !! | GTGTTGTTTCAAGATATCTT+AGG | + | chr7.1:16951074-16951093 | None:intergenic | 30.0% |
| !! | GTTTTTGATAGTAATGGTGA+TGG | - | chr7.1:16948766-16948785 | MS.gene38801:CDS | 30.0% |
| !! | TTACTTTACTGATTCAAGCT+CGG | - | chr7.1:16950560-16950579 | MS.gene38801:intron | 30.0% |
| !! | TTTGATTTGACTTGAACAAG+TGG | + | chr7.1:16951223-16951242 | None:intergenic | 30.0% |
| !!! | TGGTTTTAGTAAAGTTAGCT+AGG | - | chr7.1:16949416-16949435 | MS.gene38801:intron | 30.0% |
| AAGTCATTGGTGAAGTGAAA+GGG | + | chr7.1:16950513-16950532 | None:intergenic | 35.0% | |
| ACGTGTTTATCCATGATCTA+CGG | + | chr7.1:16949836-16949855 | None:intergenic | 35.0% | |
| ATATCTCCAGATAGACGAAA+TGG | - | chr7.1:16949304-16949323 | MS.gene38801:intron | 35.0% | |
| ATTGAAGTTCATCAGTGAAG+TGG | - | chr7.1:16951910-16951929 | MS.gene38801:CDS | 35.0% | |
| ATTTCGTCTATCTGGAGATA+TGG | + | chr7.1:16949305-16949324 | None:intergenic | 35.0% | |
| CATATGCTTGTAACTCTTAG+TGG | - | chr7.1:16951442-16951461 | MS.gene38801:intron | 35.0% | |
| CTATCAAAAACAAGACTCTC+CGG | + | chr7.1:16948757-16948776 | None:intergenic | 35.0% | |
| CTTATATTGTCTGGAAAACC+TGG | + | chr7.1:16951671-16951690 | None:intergenic | 35.0% | |
| CTTCTTCATACTCCAACATT+CGG | - | chr7.1:16950755-16950774 | MS.gene38801:intron | 35.0% | |
| GAAAGATGGAAAACTTTGGA+TGG | - | chr7.1:16951937-16951956 | MS.gene38801:CDS | 35.0% | |
| GCTATAAAGCTTAGTGATGA+AGG | - | chr7.1:16951848-16951867 | MS.gene38801:CDS | 35.0% | |
| TCAGTGTTAATGCCTTACAT+TGG | - | chr7.1:16951962-16951981 | MS.gene38801:CDS | 35.0% | |
| TTACTATTACCTATTGGAGC+TGG | + | chr7.1:16948869-16948888 | None:intergenic | 35.0% | |
| TTGCTTAAAGCAACACCATT+GGG | + | chr7.1:16951545-16951564 | None:intergenic | 35.0% | |
| TTTGCTTAAAGCAACACCAT+TGG | + | chr7.1:16951546-16951565 | None:intergenic | 35.0% | |
| ! | AAACAACTCCTTTTACGAAG+TGG | - | chr7.1:16951732-16951751 | MS.gene38801:CDS | 35.0% |
| ! | AAATTCAGAAGGGCAGTTTT+GGG | - | chr7.1:16951694-16951713 | MS.gene38801:intron | 35.0% |
| ! | AACATTAATGGACCGAATGT+TGG | + | chr7.1:16950770-16950789 | None:intergenic | 35.0% |
| ! | AACTCGTCGAAGTATTTAAG+GGG | + | chr7.1:16949804-16949823 | None:intergenic | 35.0% |
| ! | AATTGCTTCTGCAACTTTTC+TGG | - | chr7.1:16948609-16948628 | MS.gene38801:CDS | 35.0% |
| ! | CAGGTTTTCCAGACAATATA+AGG | - | chr7.1:16951669-16951688 | MS.gene38801:intron | 35.0% |
| ! | CTAACTCGTCGAAGTATTTA+AGG | + | chr7.1:16949806-16949825 | None:intergenic | 35.0% |
| ! | CTTCGTAAAAGGAGTTGTTT+TGG | + | chr7.1:16951732-16951751 | None:intergenic | 35.0% |
| ! | TACTTAATTGTTGGTAGGGT+AGG | - | chr7.1:16949350-16949369 | MS.gene38801:intron | 35.0% |
| ! | TGTTGTATGATTTGCAAGGT+CGG | - | chr7.1:16950314-16950333 | MS.gene38801:intron | 35.0% |
| ! | TTATCCTGATTTAGCCGTTT+TGG | - | chr7.1:16951151-16951170 | MS.gene38801:intron | 35.0% |
| ! | TTCAACTAGTTTGAACACGA+GGG | - | chr7.1:16950033-16950052 | MS.gene38801:CDS | 35.0% |
| ! | TTTCAACTAGTTTGAACACG+AGG | - | chr7.1:16950032-16950051 | MS.gene38801:CDS | 35.0% |
| !! | TATTCATTTTGGGTGTTTCC+AGG | - | chr7.1:16948889-16948908 | MS.gene38801:CDS | 35.0% |
| !!! | AGATGGTCGGATTTTGAAAT+GGG | - | chr7.1:16948807-16948826 | MS.gene38801:CDS | 35.0% |
| !!! | GGTACAAAAGAGCATCTTTT+GGG | - | chr7.1:16949769-16949788 | MS.gene38801:intron | 35.0% |
| AAAGCCTGGAAGATTGTGAA+GGG | - | chr7.1:16951882-16951901 | MS.gene38801:CDS | 40.0% | |
| AATCCTGCAAATCGAGGTTT+CGG | + | chr7.1:16951591-16951610 | None:intergenic | 40.0% | |
| ACAACATGGTATGATACGGT+TGG | - | chr7.1:16949701-16949720 | MS.gene38801:intron | 40.0% | |
| AGGGGAAATATTAGAAAGCC+TGG | - | chr7.1:16951868-16951887 | MS.gene38801:CDS | 40.0% | |
| AGTGAAGTGGAAGAGAAAGA+TGG | - | chr7.1:16951923-16951942 | MS.gene38801:CDS | 40.0% | |
| ATTGTTCTTCGATCCAGGAA+TGG | + | chr7.1:16948692-16948711 | None:intergenic | 40.0% | |
| CAAAACCGACGAACATTTGT+TGG | - | chr7.1:16950829-16950848 | MS.gene38801:intron | 40.0% | |
| CAAGATATCTTAGGTGCAGT+GGG | + | chr7.1:16951065-16951084 | None:intergenic | 40.0% | |
| CAAGTCATTGGTGAAGTGAA+AGG | + | chr7.1:16950514-16950533 | None:intergenic | 40.0% | |
| CATTCCAAAACGGCTAAATC+AGG | + | chr7.1:16951158-16951177 | None:intergenic | 40.0% | |
| CGTTTAGTAACTTAGCAGCA+TGG | + | chr7.1:16948717-16948736 | None:intergenic | 40.0% | |
| CTTTCACTTCACCAATGACT+TGG | - | chr7.1:16950512-16950531 | MS.gene38801:intron | 40.0% | |
| GAGTGGTACCACCATTTAAT+TGG | - | chr7.1:16949389-16949408 | MS.gene38801:intron | 40.0% | |
| GCTAAGTTACTAAACGTCAC+CGG | - | chr7.1:16948721-16948740 | MS.gene38801:CDS | 40.0% | |
| GCTTTGACTGAAATTCTGCT+AGG | - | chr7.1:16950179-16950198 | MS.gene38801:CDS | 40.0% | |
| GTATCTCCATTTCGTCTATC+TGG | + | chr7.1:16949281-16949300 | None:intergenic | 40.0% | |
| TAGACTCTAACCGTAGATCA+TGG | - | chr7.1:16949823-16949842 | MS.gene38801:intron | 40.0% | |
| TATATTGCTGATGCCTACCT+TGG | - | chr7.1:16950423-16950442 | MS.gene38801:intron | 40.0% | |
| TCAAGATATCTTAGGTGCAG+TGG | + | chr7.1:16951066-16951085 | None:intergenic | 40.0% | |
| TGACACAATACAAGGTGTAC+TGG | + | chr7.1:16950876-16950895 | None:intergenic | 40.0% | |
| TGACTGAAATTCTGCTAGGT+AGG | - | chr7.1:16950183-16950202 | MS.gene38801:CDS | 40.0% | |
| TGGGTGATTGACACAATACA+AGG | + | chr7.1:16950884-16950903 | None:intergenic | 40.0% | |
| TTCACTGATGTCCAAGTCAT+TGG | + | chr7.1:16950526-16950545 | None:intergenic | 40.0% | |
| TTGTTCTTCGATCCAGGAAT+GGG | + | chr7.1:16948691-16948710 | None:intergenic | 40.0% | |
| ! | AAGATGCTCTTTTGTACCCT+AGG | + | chr7.1:16949767-16949786 | None:intergenic | 40.0% |
| ! | CAAAAGCAATGTGTCACTCA+CGG | + | chr7.1:16949038-16949057 | None:intergenic | 40.0% |
| ! | GAAATTCAGAAGGGCAGTTT+TGG | - | chr7.1:16951693-16951712 | MS.gene38801:intron | 40.0% |
| ! | GTTAGTTCTTTCAATGCGAG+TGG | - | chr7.1:16949372-16949391 | MS.gene38801:intron | 40.0% |
| ! | GTTTTGCATGATGTGCAGAA+AGG | - | chr7.1:16950205-16950224 | MS.gene38801:CDS | 40.0% |
| ! | TCAACTAGTTTGAACACGAG+GGG | - | chr7.1:16950034-16950053 | MS.gene38801:CDS | 40.0% |
| !! | CAGATGGTCGGATTTTGAAA+TGG | - | chr7.1:16948806-16948825 | MS.gene38801:CDS | 40.0% |
| !! | GAACAGCAAAAGTATCGACT+TGG | + | chr7.1:16951646-16951665 | None:intergenic | 40.0% |
| !! | GGTGTTGCTTTAAGCAAAGA+TGG | - | chr7.1:16951548-16951567 | MS.gene38801:intron | 40.0% |
| !! | TGGGATTGTTGCTACTTTGA+AGG | + | chr7.1:16950967-16950986 | None:intergenic | 40.0% |
| !!! | CTGATTTAGCCGTTTTGGAA+TGG | - | chr7.1:16951156-16951175 | MS.gene38801:intron | 40.0% |
| !!! | GATACTTTTGCTGTTCTTCC+AGG | - | chr7.1:16951650-16951669 | MS.gene38801:intron | 40.0% |
| !!! | GATTTTGAAATGGGAAGGAG+AGG | - | chr7.1:16948816-16948835 | MS.gene38801:CDS | 40.0% |
| !!! | GGGTACAAAAGAGCATCTTT+TGG | - | chr7.1:16949768-16949787 | MS.gene38801:intron | 40.0% |
| !!! | GTGGCCTTTTTTTTTCCCAA+TGG | - | chr7.1:16951527-16951546 | MS.gene38801:intron | 40.0% |
| ACTCTTAGTGGAGACAAGAC+TGG | - | chr7.1:16951454-16951473 | MS.gene38801:intron | 45.0% | |
| AGCTTCTGTTGCTAACTGAG+TGG | + | chr7.1:16950481-16950500 | None:intergenic | 45.0% | |
| AGTGGCTGTCTTCTAATCTC+TGG | - | chr7.1:16951750-16951769 | MS.gene38801:CDS | 45.0% | |
| AGTTGGAGCATATTTGTGGG+AGG | - | chr7.1:16950361-16950380 | MS.gene38801:intron | 45.0% | |
| CAAGCTCGGTTTATCAGAGA+AGG | - | chr7.1:16950574-16950593 | MS.gene38801:intron | 45.0% | |
| CCACAAATATGCTCCAACTC+CGG | + | chr7.1:16950360-16950379 | None:intergenic | 45.0% | |
| CGGAGTTGGAGCATATTTGT+GGG | - | chr7.1:16950358-16950377 | MS.gene38801:intron | 45.0% | |
| CGGCGTATCAAATGACTCTA+TGG | - | chr7.1:16948984-16949003 | MS.gene38801:CDS | 45.0% | |
| GAAAGCCTGGAAGATTGTGA+AGG | - | chr7.1:16951881-16951900 | MS.gene38801:CDS | 45.0% | |
| GAAGACAGCCACTTCGTAAA+AGG | + | chr7.1:16951743-16951762 | None:intergenic | 45.0% | |
| GACGAAATGGAGATACACCA+TGG | - | chr7.1:16949285-16949304 | MS.gene38801:intron | 45.0% | |
| GTGGCTGTCTTCTAATCTCT+GGG | - | chr7.1:16951751-16951770 | MS.gene38801:CDS | 45.0% | |
| TCAGTTAGCAACAGAAGCTG+AGG | - | chr7.1:16950482-16950501 | MS.gene38801:intron | 45.0% | |
| TCTCTTAAGCATCTGGCAAG+AGG | - | chr7.1:16949736-16949755 | MS.gene38801:intron | 45.0% | |
| TCTTCCCTTCACAATCTTCC+AGG | + | chr7.1:16951889-16951908 | None:intergenic | 45.0% | |
| TGGAGATTGTTCTTCGATCC+AGG | + | chr7.1:16948697-16948716 | None:intergenic | 45.0% | |
| TGGCTTCATGGACCTAATGT+TGG | - | chr7.1:16951620-16951639 | MS.gene38801:intron | 45.0% | |
| TTAGTGGAGACAAGACTGGA+CGG | - | chr7.1:16951458-16951477 | MS.gene38801:intron | 45.0% | |
| ! | AGCTTTATAGCTGCAGCATG+AGG | + | chr7.1:16951839-16951858 | None:intergenic | 45.0% |
| ! | TTTTCAGCAGTTCCCATTCC+TGG | - | chr7.1:16948676-16948695 | MS.gene38801:CDS | 45.0% |
| !! | ATTCTGAGGCTTTGGCTTCA+TGG | - | chr7.1:16951608-16951627 | MS.gene38801:intron | 45.0% |
| !! | GTATCGACTTGGCCAACATT+AGG | + | chr7.1:16951635-16951654 | None:intergenic | 45.0% |
| !! | TTTGCAGGATTCTGAGGCTT+TGG | - | chr7.1:16951600-16951619 | MS.gene38801:intron | 45.0% |
| !!! | GGTCGGATTTTGAAATGGGA+AGG | - | chr7.1:16948811-16948830 | MS.gene38801:CDS | 45.0% |
| !!! | TGTTGGTCACTTTTGTCTGC+AGG | - | chr7.1:16951416-16951435 | MS.gene38801:intron | 45.0% |
| AAATGGGAAGGAGAGGAACG+TGG | - | chr7.1:16948823-16948842 | MS.gene38801:CDS | 50.0% | |
| CATATTTGTGGGAGGCCACT+AGG | - | chr7.1:16950369-16950388 | MS.gene38801:intron | 50.0% | |
| CATTGGTGAAGTGAAAGGGC+TGG | + | chr7.1:16950509-16950528 | None:intergenic | 50.0% | |
| CCCAGCCAACAAATGTTCGT+CGG | + | chr7.1:16950837-16950856 | None:intergenic | 50.0% | |
| CCGGAGTTGGAGCATATTTG+TGG | - | chr7.1:16950357-16950376 | MS.gene38801:intron | 50.0% | |
| CCTCAGAATCCTGCAAATCG+AGG | + | chr7.1:16951597-16951616 | None:intergenic | 50.0% | |
| CTGGCAAGAGGAATGTCCTA+GGG | - | chr7.1:16949748-16949767 | MS.gene38801:intron | 50.0% | |
| TACCTTGGCCTCAACGTAGT+AGG | - | chr7.1:16950438-16950457 | MS.gene38801:intron | 50.0% | |
| TACTACGTTGAGGCCAAGGT+AGG | + | chr7.1:16950439-16950458 | None:intergenic | 50.0% | |
| TCAACGTAGTAGGACCTGCA+GGG | - | chr7.1:16950448-16950467 | MS.gene38801:intron | 50.0% | |
| TCTGGCAAGAGGAATGTCCT+AGG | - | chr7.1:16949747-16949766 | MS.gene38801:intron | 50.0% | |
| TTGCTGTCACCAGCTCCAAT+AGG | - | chr7.1:16948857-16948876 | MS.gene38801:CDS | 50.0% | |
| ! | ACCGACGAACATTTGTTGGC+TGG | - | chr7.1:16950833-16950852 | MS.gene38801:intron | 50.0% |
| ! | CAAGTGGTTGCAAGCGTTGT+TGG | - | chr7.1:16951805-16951824 | MS.gene38801:CDS | 50.0% |
| ! | CCGACGAACATTTGTTGGCT+GGG | - | chr7.1:16950834-16950853 | MS.gene38801:intron | 50.0% |
| ! | CCTCGATTTGCAGGATTCTG+AGG | - | chr7.1:16951594-16951613 | MS.gene38801:intron | 50.0% |
| ! | TAGCCGAAACCTCGATTTGC+AGG | - | chr7.1:16951585-16951604 | MS.gene38801:intron | 50.0% |
| AACAAGACTCTCCGGCCCAA+CGG | + | chr7.1:16948749-16948768 | None:intergenic | 55.0% | |
| AACGTAGTAGGACCTGCAGG+GGG | - | chr7.1:16950450-16950469 | MS.gene38801:intron | 55.0% | |
| CAACGTAGTAGGACCTGCAG+GGG | - | chr7.1:16950449-16950468 | MS.gene38801:intron | 55.0% | |
| CTCAACGTAGTAGGACCTGC+AGG | - | chr7.1:16950447-16950466 | MS.gene38801:intron | 55.0% | |
| CTGCAGGTCCTACTACGTTG+AGG | + | chr7.1:16950449-16950468 | None:intergenic | 55.0% | |
| CTGTGTGCATCCATTCGCAC+CGG | - | chr7.1:16950338-16950357 | MS.gene38801:intron | 55.0% | |
| GTCCTACTACGTTGAGGCCA+AGG | + | chr7.1:16950443-16950462 | None:intergenic | 55.0% | |
| TAAACGTCACCGGAGCCGTT+GGG | - | chr7.1:16948731-16948750 | MS.gene38801:CDS | 55.0% | |
| !! | AATGGTGATGGGCCGTACAC+CGG | - | chr7.1:16948778-16948797 | MS.gene38801:CDS | 55.0% |
| !! | GAACACGAGGGGCATTGAGT+TGG | - | chr7.1:16950045-16950064 | MS.gene38801:CDS | 55.0% |
| AATCCGACCATCTGCCACGC+CGG | + | chr7.1:16948800-16948819 | None:intergenic | 60.0% | |
| AGTAGGACCTGCAGGGGGTT+TGG | - | chr7.1:16950455-16950474 | MS.gene38801:intron | 60.0% | |
| CTAAACGTCACCGGAGCCGT+TGG | - | chr7.1:16948730-16948749 | MS.gene38801:CDS | 60.0% | |
| GCATCCATTCGCACCGGAGT+TGG | - | chr7.1:16950344-16950363 | MS.gene38801:intron | 60.0% | |
| GGGAAGGAGAGGAACGTGGT+TGG | - | chr7.1:16948827-16948846 | MS.gene38801:CDS | 60.0% | |
| TGCTCCAACTCCGGTGCGAA+TGG | + | chr7.1:16950351-16950370 | None:intergenic | 60.0% | |
| !! | CACGAGGGGCATTGAGTTGG+AGG | - | chr7.1:16950048-16950067 | MS.gene38801:CDS | 60.0% |
| ACACCGGCGTGGCAGATGGT+CGG | - | chr7.1:16948794-16948813 | MS.gene38801:CDS | 65.0% | |
| CCATCTGCCACGCCGGTGTA+CGG | + | chr7.1:16948793-16948812 | None:intergenic | 65.0% | |
| TGAGTGGCCAAACCCCCTGC+AGG | + | chr7.1:16950465-16950484 | None:intergenic | 65.0% | |
| ACTCTCCGGCCCAACGGCTC+CGG | + | chr7.1:16948743-16948762 | None:intergenic | 70.0% | |
| CCGTACACCGGCGTGGCAGA+TGG | - | chr7.1:16948790-16948809 | MS.gene38801:CDS | 70.0% | |
| ! | TGATGGGCCGTACACCGGCG+TGG | - | chr7.1:16948783-16948802 | MS.gene38801:CDS | 70.0% |
| CGTCACCGGAGCCGTTGGGC+CGG | - | chr7.1:16948735-16948754 | MS.gene38801:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 16948595 | 16952000 | 16948595 | ID=MS.gene38801 |
| chr7.1 | mRNA | 16948595 | 16952000 | 16948595 | ID=MS.gene38801.t1;Parent=MS.gene38801 |
| chr7.1 | exon | 16951717 | 16952000 | 16951717 | ID=MS.gene38801.t1.exon1;Parent=MS.gene38801.t1 |
| chr7.1 | CDS | 16951717 | 16952000 | 16951717 | ID=cds.MS.gene38801.t1;Parent=MS.gene38801.t1 |
| chr7.1 | exon | 16950000 | 16950263 | 16950000 | ID=MS.gene38801.t1.exon2;Parent=MS.gene38801.t1 |
| chr7.1 | CDS | 16950000 | 16950263 | 16950000 | ID=cds.MS.gene38801.t1;Parent=MS.gene38801.t1 |
| chr7.1 | exon | 16949116 | 16949157 | 16949116 | ID=MS.gene38801.t1.exon3;Parent=MS.gene38801.t1 |
| chr7.1 | CDS | 16949116 | 16949157 | 16949116 | ID=cds.MS.gene38801.t1;Parent=MS.gene38801.t1 |
| chr7.1 | exon | 16948595 | 16949033 | 16948595 | ID=MS.gene38801.t1.exon4;Parent=MS.gene38801.t1 |
| chr7.1 | CDS | 16948595 | 16949033 | 16948595 | ID=cds.MS.gene38801.t1;Parent=MS.gene38801.t1 |
| Gene Sequence |
| Protein sequence |
