Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39129.t1 | KEH23600.1 | 93.5 | 325 | 21 | 0 | 1 | 325 | 1 | 325 | 1.60E-176 | 628.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39129.t1 | Q4V3D9 | 57.4 | 345 | 107 | 1 | 21 | 325 | 30 | 374 | 3.4e-111 | 402.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39129.t1 | A0A072UCL7 | 93.5 | 325 | 21 | 0 | 1 | 325 | 1 | 325 | 1.1e-176 | 628.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene39129 | MS.gene059296 | PPI |
| MS.gene39129 | MS.gene61630 | PPI |
| MS.gene39129 | MS.gene66625 | PPI |
| MS.gene39129 | MS.gene35719 | PPI |
| MS.gene39129 | MS.gene061292 | PPI |
| MS.gene39129 | MS.gene034366 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39129.t1 | MTR_7g490330 | 93.538 | 325 | 21 | 0 | 1 | 325 | 1 | 325 | 0.0 | 632 |
| MS.gene39129.t1 | MTR_5g091980 | 78.221 | 326 | 67 | 2 | 1 | 325 | 1 | 323 | 0.0 | 513 |
| MS.gene39129.t1 | MTR_7g490350 | 69.459 | 370 | 67 | 4 | 1 | 325 | 1 | 369 | 0.0 | 504 |
| MS.gene39129.t1 | MTR_7g090300 | 69.061 | 362 | 67 | 2 | 9 | 325 | 8 | 369 | 8.74e-178 | 496 |
| MS.gene39129.t1 | MTR_2g087780 | 47.953 | 342 | 128 | 4 | 31 | 325 | 57 | 395 | 3.64e-103 | 308 |
| MS.gene39129.t1 | MTR_4g050190 | 48.246 | 342 | 127 | 6 | 31 | 325 | 53 | 391 | 3.87e-101 | 303 |
| MS.gene39129.t1 | MTR_2g099030 | 49.533 | 321 | 114 | 4 | 47 | 320 | 82 | 401 | 6.08e-101 | 303 |
| MS.gene39129.t1 | MTR_7g090310 | 45.455 | 330 | 130 | 4 | 45 | 324 | 56 | 385 | 4.89e-99 | 297 |
| MS.gene39129.t1 | MTR_7g090320 | 45.015 | 331 | 131 | 4 | 45 | 324 | 56 | 386 | 2.86e-97 | 293 |
| MS.gene39129.t1 | MTR_4g112670 | 39.815 | 324 | 174 | 3 | 20 | 323 | 12 | 334 | 5.99e-78 | 241 |
| MS.gene39129.t1 | MTR_4g112630 | 40.248 | 323 | 176 | 5 | 13 | 324 | 9 | 325 | 2.02e-76 | 237 |
| MS.gene39129.t1 | MTR_4g112650 | 40.673 | 327 | 168 | 5 | 13 | 319 | 9 | 329 | 4.08e-76 | 237 |
| MS.gene39129.t1 | MTR_2g058450 | 42.345 | 307 | 157 | 5 | 38 | 325 | 31 | 336 | 1.32e-71 | 225 |
| MS.gene39129.t1 | MTR_4g112620 | 35.714 | 336 | 167 | 6 | 1 | 324 | 2 | 300 | 5.43e-58 | 189 |
| MS.gene39129.t1 | MTR_2g058410 | 38.696 | 230 | 126 | 2 | 108 | 322 | 1 | 230 | 3.05e-45 | 154 |
| MS.gene39129.t1 | MTR_0003s0530 | 39.444 | 180 | 93 | 1 | 152 | 315 | 2 | 181 | 1.71e-38 | 135 |
| MS.gene39129.t1 | MTR_8g074170 | 38.961 | 231 | 116 | 8 | 47 | 275 | 78 | 285 | 9.81e-37 | 135 |
| MS.gene39129.t1 | MTR_8g074270 | 37.991 | 229 | 121 | 6 | 47 | 275 | 78 | 285 | 6.88e-36 | 133 |
| MS.gene39129.t1 | MTR_8g074210 | 35.319 | 235 | 125 | 5 | 44 | 275 | 75 | 285 | 1.41e-34 | 130 |
| MS.gene39129.t1 | MTR_4g112840 | 43.750 | 112 | 63 | 0 | 179 | 290 | 57 | 168 | 1.65e-24 | 97.8 |
| MS.gene39129.t1 | MTR_2g042370 | 30.242 | 248 | 134 | 5 | 115 | 325 | 112 | 357 | 2.35e-24 | 102 |
| MS.gene39129.t1 | MTR_2g042420 | 29.032 | 248 | 136 | 4 | 115 | 325 | 105 | 349 | 1.13e-23 | 100 |
| MS.gene39129.t1 | MTR_1g075865 | 41.509 | 106 | 61 | 1 | 156 | 261 | 7 | 111 | 6.87e-23 | 92.8 |
| MS.gene39129.t1 | MTR_2g042430 | 27.451 | 306 | 170 | 7 | 57 | 321 | 70 | 364 | 1.43e-22 | 97.1 |
| MS.gene39129.t1 | MTR_8g074320 | 39.394 | 132 | 75 | 3 | 102 | 230 | 92 | 221 | 2.75e-20 | 88.2 |
| MS.gene39129.t1 | MTR_2g058430 | 39.560 | 91 | 51 | 1 | 99 | 185 | 52 | 142 | 6.85e-15 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39129.t1 | AT3G57030 | 57.391 | 345 | 107 | 1 | 21 | 325 | 30 | 374 | 3.32e-141 | 404 |
| MS.gene39129.t1 | AT5G22020 | 48.094 | 341 | 129 | 4 | 30 | 325 | 58 | 395 | 3.61e-103 | 308 |
| MS.gene39129.t1 | AT5G22020 | 48.094 | 341 | 129 | 4 | 30 | 325 | 58 | 395 | 3.61e-103 | 308 |
| MS.gene39129.t1 | AT5G22020 | 48.094 | 341 | 129 | 4 | 30 | 325 | 58 | 395 | 3.61e-103 | 308 |
| MS.gene39129.t1 | AT1G08470 | 48.094 | 341 | 127 | 5 | 31 | 325 | 53 | 389 | 1.01e-101 | 304 |
| MS.gene39129.t1 | AT2G41290 | 47.619 | 336 | 127 | 5 | 38 | 325 | 42 | 376 | 6.72e-95 | 286 |
| MS.gene39129.t1 | AT3G59530 | 44.578 | 332 | 125 | 5 | 37 | 321 | 74 | 393 | 5.22e-90 | 275 |
| MS.gene39129.t1 | AT3G59530 | 44.578 | 332 | 125 | 5 | 37 | 321 | 74 | 393 | 5.22e-90 | 275 |
| MS.gene39129.t1 | AT3G59530 | 44.578 | 332 | 125 | 5 | 37 | 321 | 74 | 393 | 5.22e-90 | 275 |
| MS.gene39129.t1 | AT3G57010 | 43.017 | 358 | 156 | 6 | 9 | 322 | 14 | 367 | 5.16e-88 | 269 |
| MS.gene39129.t1 | AT3G57020 | 42.735 | 351 | 156 | 5 | 13 | 322 | 20 | 366 | 9.14e-87 | 265 |
| MS.gene39129.t1 | AT2G41300 | 46.129 | 310 | 124 | 3 | 53 | 322 | 84 | 390 | 1.48e-85 | 263 |
| MS.gene39129.t1 | AT3G57020 | 41.595 | 351 | 146 | 5 | 13 | 322 | 20 | 352 | 8.30e-81 | 249 |
| MS.gene39129.t1 | AT1G74020 | 42.955 | 291 | 153 | 4 | 47 | 325 | 38 | 327 | 1.43e-71 | 225 |
| MS.gene39129.t1 | AT1G74010 | 41.638 | 293 | 153 | 7 | 47 | 325 | 37 | 325 | 3.73e-65 | 208 |
| MS.gene39129.t1 | AT1G74000 | 39.863 | 291 | 162 | 4 | 47 | 325 | 40 | 329 | 9.08e-64 | 205 |
| MS.gene39129.t1 | AT3G51440 | 34.241 | 257 | 147 | 7 | 24 | 279 | 48 | 283 | 7.89e-32 | 122 |
| MS.gene39129.t1 | AT3G51430 | 33.074 | 257 | 150 | 8 | 24 | 279 | 48 | 283 | 1.45e-29 | 116 |
| MS.gene39129.t1 | AT3G51430 | 32.549 | 255 | 150 | 8 | 24 | 277 | 48 | 281 | 8.68e-29 | 114 |
| MS.gene39129.t1 | AT3G51420 | 31.405 | 242 | 146 | 7 | 34 | 274 | 56 | 278 | 1.19e-27 | 111 |
| MS.gene39129.t1 | AT3G51450 | 32.189 | 233 | 138 | 7 | 48 | 279 | 70 | 283 | 1.29e-27 | 111 |
Find 80 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCGCCGGTTCTCATTGC+TGG | 0.233229 | 7.4:-18491531 | MS.gene39129:CDS |
| GAAATTCATATGGTCAGTTT+TGG | 0.251338 | 7.4:-18487967 | MS.gene39129:CDS |
| ATTCTTCGGCTTTGGCTTCA+TGG | 0.268437 | 7.4:-18488052 | MS.gene39129:CDS |
| CTTTCACTTCACCAATGATT+TGG | 0.275944 | 7.4:-18489063 | MS.gene39129:CDS |
| CTTCCTTTCGAAATCTTCTA+AGG | 0.294652 | 7.4:+18487889 | None:intergenic |
| AAACTATAAACGCCAATATA+AGG | 0.301059 | 7.4:+18487800 | None:intergenic |
| GTATTGACTTTACCAGCTTT+TGG | 0.326444 | 7.4:+18488028 | None:intergenic |
| TTACTTAAAGCAACACCATT+AGG | 0.327844 | 7.4:+18488118 | None:intergenic |
| CATCAAATTGCAGGATTCTT+CGG | 0.331554 | 7.4:-18488066 | MS.gene39129:CDS |
| GCGGGAGGCCACTAGGACTA+AGG | 0.337333 | 7.4:-18489199 | MS.gene39129:CDS |
| ATTGCAGGATTCTTCGGCTT+TGG | 0.363044 | 7.4:-18488060 | MS.gene39129:CDS |
| TTCATTGATGTCCAAATCAT+TGG | 0.369450 | 7.4:+18489052 | None:intergenic |
| CTTGTTAGTGGCGACAAGAC+TGG | 0.382913 | 7.4:-18488205 | MS.gene39129:CDS |
| CTTCAGCTTCTGTTGCTACT+CGG | 0.383213 | 7.4:+18489093 | None:intergenic |
| TAGCTGAAACATCAAATTGC+AGG | 0.387024 | 7.4:-18488075 | MS.gene39129:CDS |
| CCATCTGCCACGCCGGTGTA+TGG | 0.392307 | 7.4:+18491417 | None:intergenic |
| ACTCTCTGGCCCGACGGCTC+TGG | 0.416731 | 7.4:+18491467 | None:intergenic |
| CTTATATTGTCGGGAAAACC+TGG | 0.434775 | 7.4:+18487992 | None:intergenic |
| TGAATTTCTCCTTATATTGT+CGG | 0.438415 | 7.4:+18487982 | None:intergenic |
| AAGAGAAAGATGGAAAACTT+TGG | 0.439332 | 7.4:-18487841 | MS.gene39129:CDS |
| TCAGTGGTAACGCCTTATAT+TGG | 0.440180 | 7.4:-18487812 | MS.gene39129:CDS |
| CTCAACGTAGTAGGATCTGC+AGG | 0.441161 | 7.4:-18489128 | MS.gene39129:CDS |
| CCGCAAATATGCTCTAACTT+TGG | 0.444704 | 7.4:+18489218 | None:intergenic |
| GGTGTTGCTTTAAGTAAAGA+TGG | 0.445655 | 7.4:-18488112 | MS.gene39129:CDS |
| CAAAGTTAGAGCATATTTGC+GGG | 0.456089 | 7.4:-18489217 | MS.gene39129:CDS |
| GAATTTCTCCTTATATTGTC+GGG | 0.456126 | 7.4:+18487983 | None:intergenic |
| TTGCTGTCACGAGTTCGAAT+AGG | 0.456146 | 7.4:-18491350 | MS.gene39129:intron |
| GAAGTGAAAGTCTTATTAAG+AGG | 0.463897 | 7.4:-18488151 | MS.gene39129:CDS |
| TGCAGCATGAAGGCTGTCCT+TGG | 0.469119 | 7.4:+18491587 | None:intergenic |
| TTCAGCTTCTGTTGCTACTC+GGG | 0.470596 | 7.4:+18489094 | None:intergenic |
| TATATTGCTGATGCTTACCT+TGG | 0.473507 | 7.4:-18489152 | MS.gene39129:CDS |
| TGCTCTAACTTTGGTGCGAA+TGG | 0.480454 | 7.4:+18489227 | None:intergenic |
| CAAATCATTGGTGAAGTGAA+AGG | 0.483098 | 7.4:+18489064 | None:intergenic |
| CATATTTGCGGGAGGCCACT+AGG | 0.483919 | 7.4:-18489206 | MS.gene39129:CDS |
| TGGCTTCATGGACCAAAAGC+TGG | 0.484513 | 7.4:-18488040 | MS.gene39129:CDS |
| TTATCAAATACAAGACTCTC+TGG | 0.500391 | 7.4:+18491453 | None:intergenic |
| ATCCTACTACGTTGAGGCCA+AGG | 0.514500 | 7.4:+18489135 | None:intergenic |
| CACTTCACTAATGTTCCTCA+TGG | 0.516999 | 7.4:+18487865 | None:intergenic |
| TCTGATCCAGCAATGAGAAC+CGG | 0.524333 | 7.4:+18491525 | None:intergenic |
| AAATCATTGGTGAAGTGAAA+GGG | 0.525518 | 7.4:+18489065 | None:intergenic |
| TTGTTAGTGGCGACAAGACT+GGG | 0.525775 | 7.4:-18488204 | MS.gene39129:CDS |
| CCAAAGTTAGAGCATATTTG+CGG | 0.526459 | 7.4:-18489218 | MS.gene39129:CDS |
| AATATAAGGAGAAATTCATA+TGG | 0.526476 | 7.4:-18487977 | MS.gene39129:CDS |
| TACCTTGGCCTCAACGTAGT+AGG | 0.526697 | 7.4:-18489137 | MS.gene39129:CDS |
| AGTGAAGTGGAAGAGAAAGA+TGG | 0.526795 | 7.4:-18487851 | MS.gene39129:CDS |
| CTCCACGTCACCAGAGCCGT+CGG | 0.530168 | 7.4:-18491477 | MS.gene39129:CDS |
| GCCCGACGGCTCTGGTGACG+TGG | 0.534231 | 7.4:+18491475 | None:intergenic |
| GCTGTAAAGCTGAATGATGA+AGG | 0.537230 | 7.4:-18487926 | MS.gene39129:CDS |
| AAAACTTTGGATTGCATCAG+TGG | 0.539733 | 7.4:-18487828 | MS.gene39129:CDS |
| CCATACACCGGCGTGGCAGA+TGG | 0.558438 | 7.4:-18491417 | MS.gene39129:CDS |
| TTATCAAACCTTAGTCCTAG+TGG | 0.561618 | 7.4:+18489191 | None:intergenic |
| AGCACAGCCTCCATGCTGCT+CGG | 0.567065 | 7.4:-18491503 | MS.gene39129:CDS |
| CACGGTGAGGGTCCATACAC+CGG | 0.568553 | 7.4:-18491429 | MS.gene39129:CDS |
| AGCTTCTGTTGCTACTCGGG+TGG | 0.570276 | 7.4:+18489097 | None:intergenic |
| AGTCTTGTATTTGATAATCA+CGG | 0.575169 | 7.4:-18491447 | MS.gene39129:CDS |
| GTATTTGATAATCACGGTGA+GGG | 0.579613 | 7.4:-18491441 | MS.gene39129:CDS |
| CATGAGGAACATTAGTGAAG+TGG | 0.579908 | 7.4:-18487864 | MS.gene39129:CDS |
| TACAAGACTCTCTGGCCCGA+CGG | 0.585043 | 7.4:+18491461 | None:intergenic |
| AAACCTTAGAAGATTTCGAA+AGG | 0.590400 | 7.4:-18487892 | MS.gene39129:CDS |
| TCCACGTCACCAGAGCCGTC+GGG | 0.590905 | 7.4:-18491476 | MS.gene39129:CDS |
| TAAATTAAACATGAACTCCA+AGG | 0.609943 | 7.4:-18491604 | None:intergenic |
| AAGTGGGAAGGGAAGAAACG+TGG | 0.611297 | 7.4:-18491384 | MS.gene39129:CDS |
| ACACCGGCGTGGCAGATGGT+AGG | 0.616987 | 7.4:-18491413 | MS.gene39129:CDS |
| AATCCTACCATCTGCCACGC+CGG | 0.620731 | 7.4:+18491410 | None:intergenic |
| GGGAAGGGAAGAAACGTGGT+TGG | 0.626723 | 7.4:-18491380 | MS.gene39129:CDS |
| CGTGGAGTAACCGAGCAGCA+TGG | 0.632041 | 7.4:+18491493 | None:intergenic |
| TGAGAAAAGTTGCAGCATGA+AGG | 0.632922 | 7.4:+18491577 | None:intergenic |
| TCAACGTAGTAGGATCTGCA+GGG | 0.635919 | 7.4:-18489127 | MS.gene39129:CDS |
| TTGGACATCAATGAAGATGA+AGG | 0.636594 | 7.4:-18489044 | MS.gene39129:CDS |
| CGAGTAGCAACAGAAGCTGA+AGG | 0.643580 | 7.4:-18489092 | MS.gene39129:CDS |
| TGTATTTGATAATCACGGTG+AGG | 0.646051 | 7.4:-18491442 | MS.gene39129:CDS |
| CAACACCATTAGGAAAAGCA+AGG | 0.647500 | 7.4:+18488128 | None:intergenic |
| CAACGTAGTAGGATCTGCAG+GGG | 0.657677 | 7.4:-18489126 | MS.gene39129:CDS |
| AGTTAGAGCATATTTGCGGG+AGG | 0.660243 | 7.4:-18489214 | MS.gene39129:CDS |
| CTGCAGATCCTACTACGTTG+AGG | 0.674681 | 7.4:+18489129 | None:intergenic |
| ATTTCGAAAGGAAGACCATG+AGG | 0.679977 | 7.4:-18487880 | MS.gene39129:CDS |
| TGAGGGTCCATACACCGGCG+TGG | 0.736129 | 7.4:-18491424 | MS.gene39129:CDS |
| GGAGTAACCGAGCAGCATGG+AGG | 0.740412 | 7.4:+18491496 | None:intergenic |
| AACGTAGTAGGATCTGCAGG+GGG | 0.742733 | 7.4:-18489125 | MS.gene39129:CDS |
| TTAGTGGCGACAAGACTGGG+AGG | 0.768612 | 7.4:-18488201 | MS.gene39129:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAAA+AGG | - | chr7.4:18489779-18489798 | MS.gene39129:intron | 0.0% |
| !! | ATTAATTGAATCATTTAAAT+AGG | - | chr7.4:18489480-18489499 | MS.gene39129:intron | 10.0% |
| !! | GTTATATAAAAATATAGTAA+TGG | - | chr7.4:18490986-18491005 | MS.gene39129:intron | 10.0% |
| !! | TTACAATTTAAAAAATTTGA+GGG | + | chr7.4:18489291-18489310 | None:intergenic | 10.0% |
| !! | TTTACAATTTAAAAAATTTG+AGG | + | chr7.4:18489292-18489311 | None:intergenic | 10.0% |
| !!! | ATTTTTCAAATTTTATAAGT+TGG | - | chr7.4:18489213-18489232 | MS.gene39129:CDS | 10.0% |
| !!! | CTATATTTTTATATAACATA+TGG | + | chr7.4:18490983-18491002 | None:intergenic | 10.0% |
| !!! | TAAATGAAATGAATTTTAAT+GGG | + | chr7.4:18490799-18490818 | None:intergenic | 10.0% |
| !!! | TTACAAATTTTAGAAAAATT+TGG | + | chr7.4:18489384-18489403 | None:intergenic | 10.0% |
| !! | ACATTATAATGACTATATTA+AGG | + | chr7.4:18490873-18490892 | None:intergenic | 15.0% |
| !! | CATTATAATGACTATATTAA+GGG | + | chr7.4:18490872-18490891 | None:intergenic | 15.0% |
| !! | TTATTAGTAAGACTTAAATT+CGG | - | chr7.4:18488162-18488181 | MS.gene39129:CDS | 15.0% |
| !!! | AATTTTATTCAAGTTACATA+TGG | - | chr7.4:18488565-18488584 | MS.gene39129:intron | 15.0% |
| !!! | ACAGTTTTTTAAAACTTAAA+GGG | + | chr7.4:18489260-18489279 | None:intergenic | 15.0% |
| !!! | AGTTTTAAAAAACTGTATAT+TGG | - | chr7.4:18489264-18489283 | MS.gene39129:intron | 15.0% |
| !!! | CTTTTACAAATATTTATGTT+TGG | + | chr7.4:18489453-18489472 | None:intergenic | 15.0% |
| !!! | GTAAATGAAATGAATTTTAA+TGG | + | chr7.4:18490800-18490819 | None:intergenic | 15.0% |
| !!! | TACAGTTTTTTAAAACTTAA+AGG | + | chr7.4:18489261-18489280 | None:intergenic | 15.0% |
| !! | AAAATTTCAAATTCGTTTAC+CGG | + | chr7.4:18488658-18488677 | None:intergenic | 20.0% |
| !! | AAATAAAAAAATGTCACATG+AGG | - | chr7.4:18489748-18489767 | MS.gene39129:intron | 20.0% |
| !! | AATATAAGGAGAAATTCATA+TGG | - | chr7.4:18491413-18491432 | MS.gene39129:CDS | 20.0% |
| !! | CCATATTCTTAATAGTTTAT+CGG | + | chr7.4:18488916-18488935 | None:intergenic | 20.0% |
| !! | CTATTAAAACTAAAGTACAA+TGG | + | chr7.4:18490019-18490038 | None:intergenic | 20.0% |
| !! | GAGTAAAAGAGTAAAATTAA+GGG | + | chr7.4:18489106-18489125 | None:intergenic | 20.0% |
| !! | GATATATTTGATTGTAGAAA+AGG | + | chr7.4:18490443-18490462 | None:intergenic | 20.0% |
| !! | GCAAATTAATAATACGTATT+AGG | + | chr7.4:18488544-18488563 | None:intergenic | 20.0% |
| !! | GTAAATGGTAAAAAAAATCA+AGG | - | chr7.4:18488387-18488406 | MS.gene39129:intron | 20.0% |
| !! | TAACATAATGATCTATATGT+TGG | - | chr7.4:18491130-18491149 | MS.gene39129:intron | 20.0% |
| !! | TAAGTGGTAAAAAAAAATCA+AGG | - | chr7.4:18488200-18488219 | MS.gene39129:CDS | 20.0% |
| !! | TGAGTAAAAGAGTAAAATTA+AGG | + | chr7.4:18489107-18489126 | None:intergenic | 20.0% |
| !! | TGTAGAATAAGGATAATTAT+GGG | + | chr7.4:18489812-18489831 | None:intergenic | 20.0% |
| !! | TTCTTAAAAAAGGAAAATGT+CGG | + | chr7.4:18490575-18490594 | None:intergenic | 20.0% |
| !! | TTGTAGAATAAGGATAATTA+TGG | + | chr7.4:18489813-18489832 | None:intergenic | 20.0% |
| !!! | AAGGTACTTATTTTTTTTTG+TGG | - | chr7.4:18488406-18488425 | MS.gene39129:intron | 20.0% |
| !!! | ACGAATTTGAAATTTTGTTA+CGG | - | chr7.4:18488662-18488681 | MS.gene39129:intron | 20.0% |
| !!! | ACGTCTATAGTTTTTTTTTA+CGG | + | chr7.4:18488821-18488840 | None:intergenic | 20.0% |
| !!! | AGGTACTTATTTTTTTTTTG+TGG | - | chr7.4:18488220-18488239 | MS.gene39129:CDS | 20.0% |
| !!! | TACAAAAGCATTCTTAAAAA+AGG | + | chr7.4:18490585-18490604 | None:intergenic | 20.0% |
| !!! | TACTTATTTTTTTTTTGTGG+TGG | - | chr7.4:18488223-18488242 | MS.gene39129:CDS | 20.0% |
| !!! | TTGTTTAATGTTTTGATACA+AGG | + | chr7.4:18488720-18488739 | None:intergenic | 20.0% |
| !!! | TTTAATAGCTTTTTTTTGTC+AGG | - | chr7.4:18490031-18490050 | MS.gene39129:intron | 20.0% |
| ! | AAAAACTATAGACGTTTGAT+AGG | - | chr7.4:18488826-18488845 | MS.gene39129:intron | 25.0% |
| ! | AAACTATAAACGCCAATATA+AGG | + | chr7.4:18491593-18491612 | None:intergenic | 25.0% |
| ! | AGAGAAAGAGAATGATAAAA+GGG | - | chr7.4:18489720-18489739 | MS.gene39129:intron | 25.0% |
| ! | AGGGAACAATTTAAAAACTA+TGG | + | chr7.4:18489241-18489260 | None:intergenic | 25.0% |
| ! | AGTTATAGACTAATTTCTGA+AGG | + | chr7.4:18489055-18489074 | None:intergenic | 25.0% |
| ! | ATACAAAATCCCTCTAATTT+GGG | + | chr7.4:18490744-18490763 | None:intergenic | 25.0% |
| ! | CAAAGAAAGAATAACATAGA+AGG | + | chr7.4:18488112-18488131 | None:intergenic | 25.0% |
| ! | CCGATAAACTATTAAGAATA+TGG | - | chr7.4:18488913-18488932 | MS.gene39129:intron | 25.0% |
| ! | CTAAGGTTTGATAAGAAAAA+TGG | - | chr7.4:18490208-18490227 | MS.gene39129:intron | 25.0% |
| ! | CTTCTATGTTATTCTTTCTT+TGG | - | chr7.4:18488110-18488129 | MS.gene39129:CDS | 25.0% |
| ! | GACAATGCATAAAATATGTA+AGG | + | chr7.4:18488453-18488472 | None:intergenic | 25.0% |
| ! | GGAACAATTTAAAAACTATG+GGG | + | chr7.4:18489239-18489258 | None:intergenic | 25.0% |
| ! | GGGAACAATTTAAAAACTAT+GGG | + | chr7.4:18489240-18489259 | None:intergenic | 25.0% |
| ! | GGTCAAAGAATTGAAAAATA+TGG | + | chr7.4:18489363-18489382 | None:intergenic | 25.0% |
| ! | GTAATATAACCGATAACTTA+AGG | - | chr7.4:18488694-18488713 | MS.gene39129:intron | 25.0% |
| ! | TATACAAAATCCCTCTAATT+TGG | + | chr7.4:18490745-18490764 | None:intergenic | 25.0% |
| ! | TGAATTTCTCCTTATATTGT+CGG | + | chr7.4:18491411-18491430 | None:intergenic | 25.0% |
| !! | AAATTCATATGGTCAGTTTT+GGG | - | chr7.4:18491424-18491443 | MS.gene39129:CDS | 25.0% |
| !! | AGAAATTAGTCTATAACTCT+AGG | - | chr7.4:18489057-18489076 | MS.gene39129:CDS | 25.0% |
| !! | AGTCTTGTATTTGATAATCA+CGG | - | chr7.4:18487943-18487962 | MS.gene39129:CDS | 25.0% |
| !! | CATTGTTATTGATTACAAAC+AGG | - | chr7.4:18490482-18490501 | MS.gene39129:intron | 25.0% |
| !! | GTTTATAGTTTTCTCGTAAA+TGG | - | chr7.4:18488372-18488391 | MS.gene39129:intron | 25.0% |
| !! | TATTCAAGTTACATATGGAA+TGG | - | chr7.4:18488570-18488589 | MS.gene39129:intron | 25.0% |
| !!! | CATTTCTATAAAAGTGTTTG+TGG | - | chr7.4:18488999-18489018 | MS.gene39129:intron | 25.0% |
| !!! | CGTCTATAGTTTTTTTTTAC+GGG | + | chr7.4:18488820-18488839 | None:intergenic | 25.0% |
| !!! | GTACTTATTTTTTTTTGTGG+TGG | - | chr7.4:18488409-18488428 | MS.gene39129:intron | 25.0% |
| !!! | TATACACTTTTACTTGTTAG+TGG | - | chr7.4:18491173-18491192 | MS.gene39129:intron | 25.0% |
| AAACCTTAGAAGATTTCGAA+AGG | - | chr7.4:18491498-18491517 | MS.gene39129:CDS | 30.0% | |
| AAATCATTGGTGAAGTGAAA+GGG | + | chr7.4:18490328-18490347 | None:intergenic | 30.0% | |
| AAATGGGTCCATAAGTTTAA+GGG | + | chr7.4:18488764-18488783 | None:intergenic | 30.0% | |
| AAGACAGAGATTGTAGAATA+AGG | + | chr7.4:18489823-18489842 | None:intergenic | 30.0% | |
| AAGACCATGACATAGTAAAT+GGG | + | chr7.4:18488780-18488799 | None:intergenic | 30.0% | |
| AAGAGAAAGATGGAAAACTT+TGG | - | chr7.4:18491549-18491568 | MS.gene39129:CDS | 30.0% | |
| ACAAGGACAAAGATTATGTA+CGG | - | chr7.4:18488494-18488513 | MS.gene39129:intron | 30.0% | |
| ACCAATTTGCAAAATTTGAG+AGG | + | chr7.4:18489340-18489359 | None:intergenic | 30.0% | |
| AGAATATGGTGTGATGTATT+TGG | - | chr7.4:18488927-18488946 | MS.gene39129:intron | 30.0% | |
| AGTAATGATACATTGACCAA+TGG | - | chr7.4:18489638-18489657 | MS.gene39129:intron | 30.0% | |
| ATCTATTGAGTTAGGATTTG+TGG | + | chr7.4:18489578-18489597 | None:intergenic | 30.0% | |
| CAAAGAAAGAATAACAGAGA+AGG | + | chr7.4:18488300-18488319 | None:intergenic | 30.0% | |
| CTGAAAACAGATAGAAAGTT+AGG | + | chr7.4:18489896-18489915 | None:intergenic | 30.0% | |
| CTTCTCTGTTATTCTTTCTT+TGG | - | chr7.4:18488298-18488317 | MS.gene39129:intron | 30.0% | |
| GAATGGATCATATCAAAGTT+TGG | - | chr7.4:18488612-18488631 | MS.gene39129:intron | 30.0% | |
| GAATTTCTCCTTATATTGTC+GGG | + | chr7.4:18491410-18491429 | None:intergenic | 30.0% | |
| GAGAGAAAGAGAATGATAAA+AGG | - | chr7.4:18489719-18489738 | MS.gene39129:intron | 30.0% | |
| GTATCATTACTCGTAGAATA+AGG | + | chr7.4:18489629-18489648 | None:intergenic | 30.0% | |
| GTCAACTTCTTAAATACACT+CGG | - | chr7.4:18489027-18489046 | MS.gene39129:CDS | 30.0% | |
| TAAAAAAATGTCACATGAGG+TGG | - | chr7.4:18489751-18489770 | MS.gene39129:intron | 30.0% | |
| TAAATGGGTCCATAAGTTTA+AGG | + | chr7.4:18488765-18488784 | None:intergenic | 30.0% | |
| TACAAAATCCCTCTAATTTG+GGG | + | chr7.4:18490743-18490762 | None:intergenic | 30.0% | |
| TAGTAGTAGTAATACCCATT+TGG | - | chr7.4:18488066-18488085 | MS.gene39129:CDS | 30.0% | |
| TGCATAAAATATGTAAGGTC+CGG | + | chr7.4:18488448-18488467 | None:intergenic | 30.0% | |
| TTACTTAAAGCAACACCATT+AGG | + | chr7.4:18491275-18491294 | None:intergenic | 30.0% | |
| TTAGAGTACATCAAAGTATG+AGG | - | chr7.4:18491048-18491067 | MS.gene39129:intron | 30.0% | |
| TTATCAAATACAAGACTCTC+TGG | + | chr7.4:18487940-18487959 | None:intergenic | 30.0% | |
| TTCATTGATGTCCAAATCAT+TGG | + | chr7.4:18490341-18490360 | None:intergenic | 30.0% | |
| TTCGGTTTATCTATTGAGTT+AGG | + | chr7.4:18489586-18489605 | None:intergenic | 30.0% | |
| ! | AATACTTTTGTTGATCTTCC+AGG | - | chr7.4:18491380-18491399 | MS.gene39129:CDS | 30.0% |
| ! | AATCGTATGGAGGATAATTT+TGG | + | chr7.4:18490711-18490730 | None:intergenic | 30.0% |
| ! | ACTATATTAAGGGTATGCTT+GGG | + | chr7.4:18490862-18490881 | None:intergenic | 30.0% |
| ! | GAAATTCATATGGTCAGTTT+TGG | - | chr7.4:18491423-18491442 | MS.gene39129:CDS | 30.0% |
| ! | GTATGGGTACTTTAGAAAAA+AGG | + | chr7.4:18490828-18490847 | None:intergenic | 30.0% |
| ! | GTTGTACCGTTATATTTTCA+AGG | - | chr7.4:18490125-18490144 | MS.gene39129:intron | 30.0% |
| ! | GTTTATAGTTTTCTCGTAAG+TGG | - | chr7.4:18488184-18488203 | MS.gene39129:CDS | 30.0% |
| ! | TCTCTGTCTTTAGTTTCAAA+CGG | - | chr7.4:18489833-18489852 | MS.gene39129:intron | 30.0% |
| ! | TTAATGGGAACACTTTTGAA+GGG | + | chr7.4:18490784-18490803 | None:intergenic | 30.0% |
| ! | TTTAATGGGAACACTTTTGA+AGG | + | chr7.4:18490785-18490804 | None:intergenic | 30.0% |
| !! | ATAGAAGGAATTTTGAAGAG+TGG | + | chr7.4:18488097-18488116 | None:intergenic | 30.0% |
| !! | GAAGTGAAAGTCTTATTAAG+AGG | - | chr7.4:18491239-18491258 | MS.gene39129:intron | 30.0% |
| !!! | ATAGCTTTTTTTTGTCAGGA+AGG | - | chr7.4:18490035-18490054 | MS.gene39129:intron | 30.0% |
| !!! | ATTTTTTTTTTGTGGTGGCT+GGG | - | chr7.4:18488228-18488247 | MS.gene39129:intron | 30.0% |
| !!! | TATTTTTTTTTGTGGTGGCT+GGG | - | chr7.4:18488414-18488433 | MS.gene39129:intron | 30.0% |
| !!! | TATTTTTTTTTTGTGGTGGC+TGG | - | chr7.4:18488227-18488246 | MS.gene39129:intron | 30.0% |
| !!! | TGTTGGTCACTTTTATTTTC+AGG | - | chr7.4:18491147-18491166 | MS.gene39129:intron | 30.0% |
| !!! | TTATTTTTTTTTGTGGTGGC+TGG | - | chr7.4:18488413-18488432 | MS.gene39129:intron | 30.0% |
| AAAACTTTGGATTGCATCAG+TGG | - | chr7.4:18491562-18491581 | MS.gene39129:CDS | 35.0% | |
| AAACACCAAATGGGTATTTC+CGG | + | chr7.4:18488262-18488281 | None:intergenic | 35.0% | |
| ACAAAATCCCTCTAATTTGG+GGG | + | chr7.4:18490742-18490761 | None:intergenic | 35.0% | |
| AGTTAGGATTTGTGGAACAT+TGG | + | chr7.4:18489570-18489589 | None:intergenic | 35.0% | |
| ATGAGGTTCGATTCTTTCAA+TGG | - | chr7.4:18491065-18491084 | MS.gene39129:intron | 35.0% | |
| ATGGAATGGCTTAGTAGTTT+GGG | - | chr7.4:18488584-18488603 | MS.gene39129:intron | 35.0% | |
| CAAAGTTAGAGCATATTTGC+GGG | - | chr7.4:18490173-18490192 | MS.gene39129:intron | 35.0% | |
| CAAATCATTGGTGAAGTGAA+AGG | + | chr7.4:18490329-18490348 | None:intergenic | 35.0% | |
| CAAGACCATGACATAGTAAA+TGG | + | chr7.4:18488781-18488800 | None:intergenic | 35.0% | |
| CATCAAATTGCAGGATTCTT+CGG | - | chr7.4:18491324-18491343 | MS.gene39129:intron | 35.0% | |
| CCAAAGTTAGAGCATATTTG+CGG | - | chr7.4:18490172-18490191 | MS.gene39129:intron | 35.0% | |
| CCGTGACCTTGAAAATATAA+CGG | + | chr7.4:18490134-18490153 | None:intergenic | 35.0% | |
| CTTCCTTTCGAAATCTTCTA+AGG | + | chr7.4:18491504-18491523 | None:intergenic | 35.0% | |
| CTTTCACTTCACCAATGATT+TGG | - | chr7.4:18490327-18490346 | MS.gene39129:intron | 35.0% | |
| GACCCTTCAAAACTACAAAT+TGG | - | chr7.4:18489314-18489333 | MS.gene39129:intron | 35.0% | |
| GATACAAGGCCTTAAGTTAT+CGG | + | chr7.4:18488706-18488725 | None:intergenic | 35.0% | |
| GCATAAAATATGTAAGGTCC+GGG | + | chr7.4:18488447-18488466 | None:intergenic | 35.0% | |
| GGAGTTAAAAAATCGTATGG+AGG | + | chr7.4:18490721-18490740 | None:intergenic | 35.0% | |
| TAGCTGAAACATCAAATTGC+AGG | - | chr7.4:18491315-18491334 | MS.gene39129:intron | 35.0% | |
| TATATTGCTGATGCTTACCT+TGG | - | chr7.4:18490238-18490257 | MS.gene39129:intron | 35.0% | |
| TATGGAATGGCTTAGTAGTT+TGG | - | chr7.4:18488583-18488602 | MS.gene39129:intron | 35.0% | |
| TTACGAAATACACGCATGAA+AGG | - | chr7.4:18490509-18490528 | MS.gene39129:intron | 35.0% | |
| TTATCAAACCTTAGTCCTAG+TGG | + | chr7.4:18490202-18490221 | None:intergenic | 35.0% | |
| TTGGACATCAATGAAGATGA+AGG | - | chr7.4:18490346-18490365 | MS.gene39129:intron | 35.0% | |
| TTTAACTCCCCCAAATTAGA+GGG | - | chr7.4:18490732-18490751 | MS.gene39129:intron | 35.0% | |
| TTTCATATTGCAAGCAAGCA+TGG | - | chr7.4:18489867-18489886 | MS.gene39129:intron | 35.0% | |
| ! | ATGCTCAGATTGACTTACTT+CGG | + | chr7.4:18489604-18489623 | None:intergenic | 35.0% |
| ! | ATTTGGGACCCTTAAACTTA+TGG | - | chr7.4:18488753-18488772 | MS.gene39129:intron | 35.0% |
| ! | GACTATATTAAGGGTATGCT+TGG | + | chr7.4:18490863-18490882 | None:intergenic | 35.0% |
| ! | GCCTCTCAAATTTTGCAAAT+TGG | - | chr7.4:18489336-18489355 | MS.gene39129:intron | 35.0% |
| ! | GTATTTGATAATCACGGTGA+GGG | - | chr7.4:18487949-18487968 | MS.gene39129:CDS | 35.0% |
| ! | TAGTAGTTTGGGTTTGTGAA+TGG | - | chr7.4:18488595-18488614 | MS.gene39129:intron | 35.0% |
| ! | TGTATTTGATAATCACGGTG+AGG | - | chr7.4:18487948-18487967 | MS.gene39129:CDS | 35.0% |
| ! | TTACTATGTCATGGTCTTGA+CGG | - | chr7.4:18488782-18488801 | MS.gene39129:intron | 35.0% |
| !! | AGAGAAGGAATTTTGAAGAG+TGG | + | chr7.4:18488285-18488304 | None:intergenic | 35.0% |
| !! | CCGTTATATTTTCAAGGTCA+CGG | - | chr7.4:18490131-18490150 | MS.gene39129:intron | 35.0% |
| !! | CTCTTAAGCATTGATGTTGT+GGG | - | chr7.4:18488965-18488984 | MS.gene39129:intron | 35.0% |
| !! | GGTGTTGCTTTAAGTAAAGA+TGG | - | chr7.4:18491278-18491297 | MS.gene39129:intron | 35.0% |
| !! | GTATGGAGGATAATTTTGGT+TGG | + | chr7.4:18490707-18490726 | None:intergenic | 35.0% |
| !! | TCTCTTAAGCATTGATGTTG+TGG | - | chr7.4:18488964-18488983 | MS.gene39129:intron | 35.0% |
| !! | TCTTAAGCATTGATGTTGTG+GGG | - | chr7.4:18488966-18488985 | MS.gene39129:intron | 35.0% |
| !! | TTTTAACTCCCCCAAATTAG+AGG | - | chr7.4:18490731-18490750 | MS.gene39129:intron | 35.0% |
| !!! | AGATGGTAGGATTTTGAAGT+GGG | - | chr7.4:18487990-18488009 | MS.gene39129:CDS | 35.0% |
| !!! | AGGCCAATTTGTAGTTTTGA+AGG | + | chr7.4:18489320-18489339 | None:intergenic | 35.0% |
| !!! | ATTTTTTTTTGTGGTGGCTG+GGG | - | chr7.4:18488415-18488434 | MS.gene39129:intron | 35.0% |
| !!! | GGCCAATTTGTAGTTTTGAA+GGG | + | chr7.4:18489319-18489338 | None:intergenic | 35.0% |
| !!! | GTATTGACTTTACCAGCTTT+TGG | + | chr7.4:18491365-18491384 | None:intergenic | 35.0% |
| !!! | TTTTTTTTTTGTGGTGGCTG+GGG | - | chr7.4:18488229-18488248 | MS.gene39129:intron | 35.0% |
| AAATGTCACATGAGGTGGTA+TGG | - | chr7.4:18489756-18489775 | MS.gene39129:intron | 40.0% | |
| AACACCAAATGGGTATTTCC+GGG | + | chr7.4:18488261-18488280 | None:intergenic | 40.0% | |
| AATGGAGGGTTTGTCATATG+GGG | + | chr7.4:18489667-18489686 | None:intergenic | 40.0% | |
| AGAATGGAGGGTTTGTCATA+TGG | + | chr7.4:18489669-18489688 | None:intergenic | 40.0% | |
| AGTGAAGTGGAAGAGAAAGA+TGG | - | chr7.4:18491539-18491558 | MS.gene39129:CDS | 40.0% | |
| ATGCAGACATCACAATCTAC+CGG | - | chr7.4:18488636-18488655 | MS.gene39129:intron | 40.0% | |
| ATTTCGAAAGGAAGACCATG+AGG | - | chr7.4:18491510-18491529 | MS.gene39129:CDS | 40.0% | |
| CAACACCATTAGGAAAAGCA+AGG | + | chr7.4:18491265-18491284 | None:intergenic | 40.0% | |
| CACTTCACTAATGTTCCTCA+TGG | + | chr7.4:18491528-18491547 | None:intergenic | 40.0% | |
| CATGAGGAACATTAGTGAAG+TGG | - | chr7.4:18491526-18491545 | MS.gene39129:CDS | 40.0% | |
| CCGCAAATATGCTCTAACTT+TGG | + | chr7.4:18490175-18490194 | None:intergenic | 40.0% | |
| CTTACATCAAACTTGCCAGA+TGG | + | chr7.4:18489698-18489717 | None:intergenic | 40.0% | |
| CTTATATTGTCGGGAAAACC+TGG | + | chr7.4:18491401-18491420 | None:intergenic | 40.0% | |
| GAAGAGTGGAAACACCAAAT+GGG | + | chr7.4:18488083-18488102 | None:intergenic | 40.0% | |
| GAATGGAGGGTTTGTCATAT+GGG | + | chr7.4:18489668-18489687 | None:intergenic | 40.0% | |
| GCTGTAAAGCTGAATGATGA+AGG | - | chr7.4:18491464-18491483 | MS.gene39129:CDS | 40.0% | |
| GGGGGAGTTAAAAAATCGTA+TGG | + | chr7.4:18490724-18490743 | None:intergenic | 40.0% | |
| TATCTCAAACCAACACCACA+AGG | + | chr7.4:18491028-18491047 | None:intergenic | 40.0% | |
| TGAAGAGTGGAAACACCAAA+TGG | + | chr7.4:18488084-18488103 | None:intergenic | 40.0% | |
| TGAGAAAAGTTGCAGCATGA+AGG | + | chr7.4:18487816-18487835 | None:intergenic | 40.0% | |
| TGGACCCATTTACTATGTCA+TGG | - | chr7.4:18488773-18488792 | MS.gene39129:intron | 40.0% | |
| ! | CAGGTTTTCCCGACAATATA+AGG | - | chr7.4:18491399-18491418 | MS.gene39129:CDS | 40.0% |
| ! | TCAGTGGTAACGCCTTATAT+TGG | - | chr7.4:18491578-18491597 | MS.gene39129:CDS | 40.0% |
| ! | TCTTTCAATGGTGCCAATTC+CGG | - | chr7.4:18491077-18491096 | MS.gene39129:intron | 40.0% |
| !! | CAGATGGTAGGATTTTGAAG+TGG | - | chr7.4:18487989-18488008 | MS.gene39129:CDS | 40.0% |
| !!! | GTAGGATTTTGAAGTGGGAA+GGG | - | chr7.4:18487995-18488014 | MS.gene39129:CDS | 40.0% |
| !!! | TTTTTTACGGGTCAAGCCAT+AGG | + | chr7.4:18488808-18488827 | None:intergenic | 40.0% |
| AAGAAGCCAAACTAGCTCAC+CGG | + | chr7.4:18491099-18491118 | None:intergenic | 45.0% | |
| ACATCAAACTTGCCAGATGG+AGG | + | chr7.4:18489695-18489714 | None:intergenic | 45.0% | |
| AGTTAGAGCATATTTGCGGG+AGG | - | chr7.4:18490176-18490195 | MS.gene39129:intron | 45.0% | |
| ATTGCAGGATTCTTCGGCTT+TGG | - | chr7.4:18491330-18491349 | MS.gene39129:intron | 45.0% | |
| CTTCAGCTTCTGTTGCTACT+CGG | + | chr7.4:18490300-18490319 | None:intergenic | 45.0% | |
| GTATGCTTGGGAGTTTAGGA+GGG | + | chr7.4:18490850-18490869 | None:intergenic | 45.0% | |
| TCAACGTAGTAGGATCTGCA+GGG | - | chr7.4:18490263-18490282 | MS.gene39129:intron | 45.0% | |
| TCTGATCCAGCAATGAGAAC+CGG | + | chr7.4:18487868-18487887 | None:intergenic | 45.0% | |
| TTCAGCTTCTGTTGCTACTC+GGG | + | chr7.4:18490299-18490318 | None:intergenic | 45.0% | |
| TTGCTGTCACGAGTTCGAAT+AGG | - | chr7.4:18488040-18488059 | MS.gene39129:CDS | 45.0% | |
| TTGTCCTTGTGAGCTTAGCT+CGG | + | chr7.4:18488484-18488503 | None:intergenic | 45.0% | |
| TTGTTAGTGGCGACAAGACT+GGG | - | chr7.4:18491186-18491205 | MS.gene39129:intron | 45.0% | |
| ! | AAGGGTATGCTTGGGAGTTT+AGG | + | chr7.4:18490854-18490873 | None:intergenic | 45.0% |
| ! | AGATGGAGGTGTAGAATGGA+GGG | + | chr7.4:18489681-18489700 | None:intergenic | 45.0% |
| ! | ATTCTTCGGCTTTGGCTTCA+TGG | - | chr7.4:18491338-18491357 | MS.gene39129:intron | 45.0% |
| ! | CATTTTCACACTCTTCTCGC+CGG | - | chr7.4:18487846-18487865 | MS.gene39129:CDS | 45.0% |
| ! | GTAATGGAACCCGTTTGAGT+TGG | - | chr7.4:18491002-18491021 | MS.gene39129:intron | 45.0% |
| ! | TGCTCTAACTTTGGTGCGAA+TGG | + | chr7.4:18490166-18490185 | None:intergenic | 45.0% |
| ! | TTGGGAGTTTAGGAGGGTAT+GGG | + | chr7.4:18490844-18490863 | None:intergenic | 45.0% |
| !! | AGAGGCCTTGCTTTTCCTAA+TGG | - | chr7.4:18491257-18491276 | MS.gene39129:intron | 45.0% |
| !!! | GGTAGGATTTTGAAGTGGGA+AGG | - | chr7.4:18487994-18488013 | MS.gene39129:CDS | 45.0% |
| !! | ACAAAATAAAATAAAAAATT+TGG | - | chr7.4:18488736-18488755 | MS.gene39129:intron | 5.0% |
| !! | CAAAATAAAATAAAAAATTT+GGG | - | chr7.4:18488737-18488756 | MS.gene39129:intron | 5.0% |
| AACGTAGTAGGATCTGCAGG+GGG | - | chr7.4:18490265-18490284 | MS.gene39129:intron | 50.0% | |
| AAGTGGGAAGGGAAGAAACG+TGG | - | chr7.4:18488006-18488025 | MS.gene39129:CDS | 50.0% | |
| ACCACAAGGCCAACTCAAAC+GGG | + | chr7.4:18491014-18491033 | None:intergenic | 50.0% | |
| ATCCTACTACGTTGAGGCCA+AGG | + | chr7.4:18490258-18490277 | None:intergenic | 50.0% | |
| CAACGTAGTAGGATCTGCAG+GGG | - | chr7.4:18490264-18490283 | MS.gene39129:intron | 50.0% | |
| CACCACAAGGCCAACTCAAA+CGG | + | chr7.4:18491015-18491034 | None:intergenic | 50.0% | |
| CCAAACTAGCTCACCGGAAT+TGG | + | chr7.4:18491093-18491112 | None:intergenic | 50.0% | |
| CCAATTCCGGTGAGCTAGTT+TGG | - | chr7.4:18491090-18491109 | MS.gene39129:intron | 50.0% | |
| CGAACCCGGAAATACCCATT+TGG | - | chr7.4:18488254-18488273 | MS.gene39129:intron | 50.0% | |
| CGAGTAGCAACAGAAGCTGA+AGG | - | chr7.4:18490298-18490317 | MS.gene39129:intron | 50.0% | |
| CTCAACGTAGTAGGATCTGC+AGG | - | chr7.4:18490262-18490281 | MS.gene39129:intron | 50.0% | |
| CTCCATTCTACACCTCCATC+TGG | - | chr7.4:18489680-18489699 | MS.gene39129:intron | 50.0% | |
| CTGCAGATCCTACTACGTTG+AGG | + | chr7.4:18490264-18490283 | None:intergenic | 50.0% | |
| CTTGGGAGTTTAGGAGGGTA+TGG | + | chr7.4:18490845-18490864 | None:intergenic | 50.0% | |
| CTTGTTAGTGGCGACAAGAC+TGG | - | chr7.4:18491185-18491204 | MS.gene39129:intron | 50.0% | |
| GGTATGCTTGGGAGTTTAGG+AGG | + | chr7.4:18490851-18490870 | None:intergenic | 50.0% | |
| TACCTTGGCCTCAACGTAGT+AGG | - | chr7.4:18490253-18490272 | MS.gene39129:intron | 50.0% | |
| TGGCTTCATGGACCAAAAGC+TGG | - | chr7.4:18491350-18491369 | MS.gene39129:intron | 50.0% | |
| TTGTCATATGGGGTGGCCAT+TGG | + | chr7.4:18489657-18489676 | None:intergenic | 50.0% | |
| ! | CAGATGGAGGTGTAGAATGG+AGG | + | chr7.4:18489682-18489701 | None:intergenic | 50.0% |
| ! | TGAGCTTAGCTCGGTTGGTA+TGG | + | chr7.4:18488475-18488494 | None:intergenic | 50.0% |
| ! | TGCCAGATGGAGGTGTAGAA+TGG | + | chr7.4:18489685-18489704 | None:intergenic | 50.0% |
| !! | TTGAGTTGGCCTTGTGGTGT+TGG | - | chr7.4:18491016-18491035 | MS.gene39129:intron | 50.0% |
| AATCCTACCATCTGCCACGC+CGG | + | chr7.4:18487983-18488002 | None:intergenic | 55.0% | |
| AGCTTCTGTTGCTACTCGGG+TGG | + | chr7.4:18490296-18490315 | None:intergenic | 55.0% | |
| AGTAGGATCTGCAGGGGGTT+TGG | - | chr7.4:18490270-18490289 | MS.gene39129:intron | 55.0% | |
| CATATTTGCGGGAGGCCACT+AGG | - | chr7.4:18490184-18490203 | MS.gene39129:intron | 55.0% | |
| CCAACCGAGCTAAGCTCACA+AGG | - | chr7.4:18488477-18488496 | MS.gene39129:intron | 55.0% | |
| CCTTGTGAGCTTAGCTCGGT+TGG | + | chr7.4:18488480-18488499 | None:intergenic | 55.0% | |
| GGAGGGTTTGTCATATGGGG+TGG | + | chr7.4:18489664-18489683 | None:intergenic | 55.0% | |
| GGGAAGGGAAGAAACGTGGT+TGG | - | chr7.4:18488010-18488029 | MS.gene39129:CDS | 55.0% | |
| TACAAGACTCTCTGGCCCGA+CGG | + | chr7.4:18487932-18487951 | None:intergenic | 55.0% | |
| TGCAGCATGAAGGCTGTCCT+TGG | + | chr7.4:18487806-18487825 | None:intergenic | 55.0% | |
| TTAGTGGCGACAAGACTGGG+AGG | - | chr7.4:18491189-18491208 | MS.gene39129:intron | 55.0% | |
| ! | GTCATGGTCTTGACGGCCTA+TGG | - | chr7.4:18488789-18488808 | MS.gene39129:intron | 55.0% |
| !! | ACCCGTTTGAGTTGGCCTTG+TGG | - | chr7.4:18491010-18491029 | MS.gene39129:intron | 55.0% |
| !! | TTCTCGCCGGTTCTCATTGC+TGG | - | chr7.4:18487859-18487878 | MS.gene39129:CDS | 55.0% |
| AGCACAGCCTCCATGCTGCT+CGG | - | chr7.4:18487887-18487906 | MS.gene39129:CDS | 60.0% | |
| CACGGTGAGGGTCCATACAC+CGG | - | chr7.4:18487961-18487980 | MS.gene39129:CDS | 60.0% | |
| CGTGGAGTAACCGAGCAGCA+TGG | + | chr7.4:18487900-18487919 | None:intergenic | 60.0% | |
| GGAGTAACCGAGCAGCATGG+AGG | + | chr7.4:18487897-18487916 | None:intergenic | 60.0% | |
| ACACCGGCGTGGCAGATGGT+AGG | - | chr7.4:18487977-18487996 | MS.gene39129:CDS | 65.0% | |
| CCATACACCGGCGTGGCAGA+TGG | - | chr7.4:18487973-18487992 | MS.gene39129:CDS | 65.0% | |
| CCATCTGCCACGCCGGTGTA+TGG | + | chr7.4:18487976-18487995 | None:intergenic | 65.0% | |
| CTCCACGTCACCAGAGCCGT+CGG | - | chr7.4:18487913-18487932 | MS.gene39129:CDS | 65.0% | |
| GCGGGAGGCCACTAGGACTA+AGG | - | chr7.4:18490191-18490210 | MS.gene39129:intron | 65.0% | |
| TCCACGTCACCAGAGCCGTC+GGG | - | chr7.4:18487914-18487933 | MS.gene39129:CDS | 65.0% | |
| TGAGGGTCCATACACCGGCG+TGG | - | chr7.4:18487966-18487985 | MS.gene39129:CDS | 65.0% | |
| TGGTGGCTGGGGTTCGAACC+CGG | - | chr7.4:18488240-18488259 | MS.gene39129:intron | 65.0% | |
| ACTCTCTGGCCCGACGGCTC+TGG | + | chr7.4:18487926-18487945 | None:intergenic | 70.0% | |
| ! | GCCCGACGGCTCTGGTGACG+TGG | + | chr7.4:18487918-18487937 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 18487796 | 18491616 | 18487796 | ID=MS.gene39129 |
| chr7.4 | mRNA | 18487796 | 18491616 | 18487796 | ID=MS.gene39129.t1;Parent=MS.gene39129 |
| chr7.4 | exon | 18491351 | 18491616 | 18491351 | ID=MS.gene39129.t1.exon1;Parent=MS.gene39129.t1 |
| chr7.4 | CDS | 18491351 | 18491616 | 18491351 | ID=cds.MS.gene39129.t1;Parent=MS.gene39129.t1 |
| chr7.4 | exon | 18489002 | 18489265 | 18489002 | ID=MS.gene39129.t1.exon2;Parent=MS.gene39129.t1 |
| chr7.4 | CDS | 18489002 | 18489265 | 18489002 | ID=cds.MS.gene39129.t1;Parent=MS.gene39129.t1 |
| chr7.4 | exon | 18487796 | 18488243 | 18487796 | ID=MS.gene39129.t1.exon3;Parent=MS.gene39129.t1 |
| chr7.4 | CDS | 18487796 | 18488243 | 18487796 | ID=cds.MS.gene39129.t1;Parent=MS.gene39129.t1 |
| Gene Sequence |
| Protein sequence |
