Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39580.t1 | XP_003612356.1 | 99.7 | 393 | 1 | 0 | 1 | 393 | 1 | 393 | 5.80E-226 | 793.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39580.t1 | Q42807 | 91.5 | 390 | 31 | 1 | 1 | 390 | 1 | 388 | 2.5e-209 | 729.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39580.t1 | Q4U601 | 99.7 | 393 | 1 | 0 | 1 | 393 | 1 | 393 | 4.2e-226 | 793.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene39580 | 0.821243 | 4.48E-53 | -1.69E-46 |
| MS.gene057872 | MS.gene39580 | 0.811482 | 6.85E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene39580 | MS.gene31844 | PPI |
| MS.gene39580 | MS.gene32324 | PPI |
| MS.gene39580 | MS.gene026689 | PPI |
| MS.gene054155 | MS.gene39580 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39580.t1 | MTR_5g024130 | 99.746 | 393 | 1 | 0 | 1 | 393 | 1 | 393 | 0.0 | 817 |
| MS.gene39580.t1 | MTR_4g087440 | 98.728 | 393 | 5 | 0 | 1 | 393 | 1 | 393 | 0.0 | 808 |
| MS.gene39580.t1 | MTR_1g029150 | 72.271 | 339 | 90 | 2 | 59 | 393 | 52 | 390 | 0.0 | 526 |
| MS.gene39580.t1 | MTR_3g090100 | 64.489 | 352 | 113 | 4 | 46 | 393 | 23 | 366 | 5.54e-169 | 477 |
| MS.gene39580.t1 | MTR_3g089025 | 65.782 | 339 | 113 | 2 | 57 | 393 | 32 | 369 | 1.50e-168 | 476 |
| MS.gene39580.t1 | MTR_3g090020 | 64.000 | 350 | 118 | 3 | 46 | 393 | 23 | 366 | 2.37e-166 | 470 |
| MS.gene39580.t1 | MTR_3g090010 | 65.970 | 335 | 111 | 2 | 59 | 391 | 35 | 368 | 5.22e-165 | 467 |
| MS.gene39580.t1 | MTR_3g090110 | 40.171 | 117 | 47 | 1 | 237 | 353 | 2 | 95 | 7.04e-22 | 90.1 |
| MS.gene39580.t1 | MTR_3g089980 | 47.423 | 97 | 38 | 1 | 257 | 353 | 7 | 90 | 1.20e-21 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39580.t1 | AT2G43710 | 80.299 | 401 | 71 | 2 | 1 | 393 | 1 | 401 | 0.0 | 674 |
| MS.gene39580.t1 | AT2G43710 | 80.050 | 401 | 72 | 2 | 1 | 393 | 1 | 401 | 0.0 | 672 |
| MS.gene39580.t1 | AT3G02630 | 76.786 | 392 | 90 | 1 | 1 | 391 | 3 | 394 | 0.0 | 639 |
| MS.gene39580.t1 | AT5G16240 | 77.778 | 360 | 77 | 2 | 33 | 391 | 35 | 392 | 0.0 | 597 |
| MS.gene39580.t1 | AT3G02610 | 68.750 | 400 | 110 | 6 | 3 | 393 | 20 | 413 | 0.0 | 551 |
| MS.gene39580.t1 | AT3G02610 | 68.750 | 400 | 110 | 6 | 3 | 393 | 18 | 411 | 0.0 | 551 |
| MS.gene39580.t1 | AT5G16230 | 67.895 | 380 | 118 | 3 | 18 | 393 | 22 | 401 | 0.0 | 538 |
| MS.gene39580.t1 | AT3G02620 | 68.338 | 379 | 108 | 4 | 21 | 393 | 34 | 406 | 0.0 | 536 |
| MS.gene39580.t1 | AT3G02620 | 68.338 | 379 | 108 | 4 | 21 | 393 | 31 | 403 | 0.0 | 536 |
| MS.gene39580.t1 | AT1G43800 | 65.274 | 383 | 126 | 4 | 14 | 391 | 9 | 389 | 0.0 | 518 |
| MS.gene39580.t1 | AT5G16230 | 74.154 | 325 | 80 | 3 | 73 | 393 | 1 | 325 | 2.78e-180 | 504 |
| MS.gene39580.t1 | AT3G02620 | 73.394 | 327 | 81 | 3 | 73 | 393 | 1 | 327 | 3.47e-179 | 501 |
Find 135 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTGATATACTTGAGTTTC+TGG | 0.154020 | 4.2:-23940277 | MS.gene39580:CDS |
| ATTTGAAAATTTCAATCTTC+TGG | 0.154979 | 4.2:+23941373 | None:intergenic |
| GCCCTACTCCTTGGGCTATT+TGG | 0.176215 | 4.2:-23941092 | MS.gene39580:CDS |
| TCCTCCAGCCTTCTGATTCT+TGG | 0.181095 | 4.2:+23940174 | None:intergenic |
| AACACTTCTCTACAGGTTTA+AGG | 0.197232 | 4.2:+23941313 | None:intergenic |
| GGTGGAAGCCATGACGAATT+TGG | 0.227957 | 4.2:+23942674 | None:intergenic |
| GCCGACATAACCGGACTTTC+AGG | 0.282345 | 4.2:-23940237 | MS.gene39580:CDS |
| CATTCAGTTGGATTCATGAT+AGG | 0.310680 | 4.2:-23940113 | MS.gene39580:CDS |
| TACTTGAACATGCACTTCTC+TGG | 0.313192 | 4.2:+23941413 | None:intergenic |
| CCAAACTATGCTTAATACTT+TGG | 0.323055 | 4.2:-23941142 | MS.gene39580:CDS |
| AGGTTTAAGGTGAGTCAATA+AGG | 0.334045 | 4.2:+23941326 | None:intergenic |
| AGATGATTACTTTGTTGTTC+TGG | 0.344575 | 4.2:-23941202 | MS.gene39580:CDS |
| TTAAGCATAGTTTGGTAAGT+AGG | 0.345744 | 4.2:+23941150 | None:intergenic |
| TTTCAAATCGTTGGAGGGTT+GGG | 0.350638 | 4.2:-23941358 | MS.gene39580:CDS |
| CCAAAGTATTAAGCATAGTT+TGG | 0.352890 | 4.2:+23941142 | None:intergenic |
| AGGATGTTTGTGTGGGGAAA+GGG | 0.354137 | 4.2:+23942733 | None:intergenic |
| AATCCAACTGAATGCAAGTT+TGG | 0.355409 | 4.2:+23940122 | None:intergenic |
| TTTGAAAATTTCAATCTTCT+GGG | 0.358302 | 4.2:+23941374 | None:intergenic |
| GTGGAAGCCATGACGAATTT+GGG | 0.375597 | 4.2:+23942675 | None:intergenic |
| TGTTGTTCTGGTTGGAGATA+TGG | 0.377751 | 4.2:-23941190 | MS.gene39580:CDS |
| AAAGATAGTGGAAAAGCTAT+TGG | 0.403395 | 4.2:-23940457 | MS.gene39580:CDS |
| CTCCTTCTCTCTCCCTCAAA+TGG | 0.406762 | 4.2:-23942712 | MS.gene39580:CDS |
| CTGCCCGATCCTTCCTCAGA+TGG | 0.416238 | 4.2:-23941273 | MS.gene39580:CDS |
| ATGGCTTCCACCCTCCGTTC+TGG | 0.424747 | 4.2:-23942663 | MS.gene39580:CDS |
| CATCCAAACTTGCATTCAGT+TGG | 0.428488 | 4.2:-23940125 | MS.gene39580:CDS |
| AGAACAACAAAGTAATCATC+TGG | 0.438790 | 4.2:+23941204 | None:intergenic |
| GATATACTTGAGTTTCTGGT+TGG | 0.441237 | 4.2:-23940273 | MS.gene39580:CDS |
| TGGAAGGTGGCCGACATAAC+CGG | 0.441892 | 4.2:-23940246 | MS.gene39580:CDS |
| AAGACAATTCAGTACCTGAT+TGG | 0.443825 | 4.2:-23940976 | MS.gene39580:CDS |
| GGTTGCCAACACTTCTCTAC+AGG | 0.448685 | 4.2:+23941306 | None:intergenic |
| GAGGATGTTTGTGTGGGGAA+AGG | 0.450618 | 4.2:+23942732 | None:intergenic |
| CAGGTGCCAGCCCTACTCCT+TGG | 0.452555 | 4.2:-23941101 | MS.gene39580:CDS |
| TGTGTTTCCATGCGATATAA+AGG | 0.456327 | 4.2:+23940572 | None:intergenic |
| CAGCAGAATAGTTATCAAAC+AGG | 0.457192 | 4.2:+23940337 | None:intergenic |
| ATTCAGTACCTGATTGGGTC+TGG | 0.458830 | 4.2:-23940970 | MS.gene39580:CDS |
| ATATACTTGAGTTTCTGGTT+GGG | 0.460993 | 4.2:-23940272 | MS.gene39580:CDS |
| GCCGCGTTCCTTAGCAAGCC+TGG | 0.462444 | 4.2:+23940548 | None:intergenic |
| AGGTGCCAGCCCTACTCCTT+GGG | 0.463988 | 4.2:-23941100 | MS.gene39580:CDS |
| TCCAGCCTTCTGATTCTTGG+TGG | 0.465016 | 4.2:+23940177 | None:intergenic |
| TCGTCCCTCACCTGAAAGTC+CGG | 0.465890 | 4.2:+23940227 | None:intergenic |
| TCTGCTGTTGCCCAGCGCAT+TGG | 0.472536 | 4.2:-23940321 | MS.gene39580:CDS |
| GGAACGCGGCGATTTGAAGT+TGG | 0.473114 | 4.2:-23940535 | MS.gene39580:CDS |
| AACAAGTATCTCTACTTGTC+CGG | 0.474429 | 4.2:-23941024 | MS.gene39580:CDS |
| TCCAAATAGCCCAAGGAGTA+GGG | 0.477229 | 4.2:+23941091 | None:intergenic |
| CAGTGTAGACTCCAATGCGC+TGG | 0.478141 | 4.2:+23940310 | None:intergenic |
| GTGTAGATAAAGCCAAGGTA+AGG | 0.480370 | 4.2:+23940615 | None:intergenic |
| GTTTCTGGTTGGGAGGTGGA+AGG | 0.480811 | 4.2:-23940262 | MS.gene39580:CDS |
| GGATGTTTGTGTGGGGAAAG+GGG | 0.482663 | 4.2:+23942734 | None:intergenic |
| TACTTGAGTTTCTGGTTGGG+AGG | 0.483685 | 4.2:-23940269 | MS.gene39580:CDS |
| TATCGCATGGAAACACAGCC+AGG | 0.484282 | 4.2:-23940566 | MS.gene39580:CDS |
| GATGGAGTTCGTGATGAAAC+AGG | 0.485012 | 4.2:-23941120 | MS.gene39580:CDS |
| AGACAATTCAGTACCTGATT+GGG | 0.486001 | 4.2:-23940975 | MS.gene39580:CDS |
| TGACGAATTTGGGAGATTTG+AGG | 0.488997 | 4.2:+23942685 | None:intergenic |
| AGAGGTTGAAAATATTAAGA+AGG | 0.489403 | 4.2:-23941448 | MS.gene39580:CDS |
| TTACCATTCCAGACCCAATC+AGG | 0.491308 | 4.2:+23940962 | None:intergenic |
| AAGGCACAGGAGTATGTTTG+TGG | 0.492271 | 4.2:-23940204 | MS.gene39580:CDS |
| GAGAAGGAGGATGTTTGTGT+GGG | 0.492426 | 4.2:+23942726 | None:intergenic |
| ATTTGAGGCTGGCCATTTGA+GGG | 0.496342 | 4.2:+23942700 | None:intergenic |
| GATTTGAGGCTGGCCATTTG+AGG | 0.496783 | 4.2:+23942699 | None:intergenic |
| CTCCTTGGGCTATTTGGACA+AGG | 0.500836 | 4.2:-23941086 | MS.gene39580:CDS |
| CGTCTCGGCCATCATACATC+AGG | 0.503492 | 4.2:+23940364 | None:intergenic |
| TTGAGTTTCTGGTTGGGAGG+TGG | 0.503890 | 4.2:-23940266 | MS.gene39580:CDS |
| TATCAAACAGGTTGTCGTCT+CGG | 0.505744 | 4.2:+23940349 | None:intergenic |
| GACTGCTTACACAAAGATAG+TGG | 0.506240 | 4.2:-23940469 | MS.gene39580:CDS |
| AGAGAAGGAGGATGTTTGTG+TGG | 0.506661 | 4.2:+23942725 | None:intergenic |
| CCATCATACATCAGGTGTGC+TGG | 0.507354 | 4.2:+23940372 | None:intergenic |
| ATTCAGTTGGATTCATGATA+GGG | 0.509293 | 4.2:-23940112 | MS.gene39580:CDS |
| ATCGTTGGAGGGTTGGGCTG+AGG | 0.511095 | 4.2:-23941352 | MS.gene39580:CDS |
| AAAGCAATAACCGTTCCATC+AGG | 0.515373 | 4.2:+23940426 | None:intergenic |
| ACTATGCTTAATACTTTGGA+TGG | 0.522020 | 4.2:-23941138 | MS.gene39580:CDS |
| GGGCTATTTGGACAAGGGCA+TGG | 0.524428 | 4.2:-23941080 | MS.gene39580:CDS |
| CTACACTTCATTTCAAGAGA+GGG | 0.526696 | 4.2:-23940598 | MS.gene39580:CDS |
| AATCCATCTGAGGAAGGATC+GGG | 0.533112 | 4.2:+23941270 | None:intergenic |
| ACTTGAACATGCACTTCTCT+GGG | 0.540588 | 4.2:+23941414 | None:intergenic |
| GCCACCAAGAATCAGAAGGC+TGG | 0.541195 | 4.2:-23940178 | MS.gene39580:CDS |
| GATTACTTTGTTGTTCTGGT+TGG | 0.542691 | 4.2:-23941198 | MS.gene39580:CDS |
| AATAGCCCAAGGAGTAGGGC+TGG | 0.546034 | 4.2:+23941095 | None:intergenic |
| AGGTGAGGGACGAAAGGCAC+AGG | 0.547789 | 4.2:-23940217 | MS.gene39580:CDS |
| GAATCCATCTGAGGAAGGAT+CGG | 0.550340 | 4.2:+23941269 | None:intergenic |
| TTGAAAATTTCAATCTTCTG+GGG | 0.552491 | 4.2:+23941375 | None:intergenic |
| ACCTGAAAGTCCGGTTATGT+CGG | 0.554587 | 4.2:+23940236 | None:intergenic |
| GTCCAAATAGCCCAAGGAGT+AGG | 0.558680 | 4.2:+23941090 | None:intergenic |
| TCTGGTTGGGAGGTGGAAGG+TGG | 0.560034 | 4.2:-23940259 | MS.gene39580:CDS |
| AGGGCGACCTTTATATCGCA+TGG | 0.560815 | 4.2:-23940579 | MS.gene39580:CDS |
| AAAATTTCAATCTTCTGGGG+AGG | 0.561159 | 4.2:+23941378 | None:intergenic |
| AGAGAAGTGTTGGCAACCAC+AGG | 0.562702 | 4.2:-23941301 | MS.gene39580:CDS |
| TTGAAGTTGGCTCAGATCTG+TGG | 0.563389 | 4.2:-23940522 | MS.gene39580:CDS |
| GTACCTGATTGGGTCTGGAA+TGG | 0.566647 | 4.2:-23940965 | MS.gene39580:intron |
| GAATTTGGGAGATTTGAGGC+TGG | 0.569445 | 4.2:+23942689 | None:intergenic |
| AGTGTAGACTCCAATGCGCT+GGG | 0.573443 | 4.2:+23940311 | None:intergenic |
| AAGTGAAGGAACTGAGAGAG+AGG | 0.573671 | 4.2:-23941239 | MS.gene39580:CDS |
| AGGCACAGGAGTATGTTTGT+GGG | 0.574102 | 4.2:-23940203 | MS.gene39580:CDS |
| AAGTATATCAGCATAGTCCT+TGG | 0.575108 | 4.2:+23940287 | None:intergenic |
| TTAAACCTGTAGAGAAGTGT+TGG | 0.579690 | 4.2:-23941311 | MS.gene39580:CDS |
| TCTACACTTCATTTCAAGAG+AGG | 0.581234 | 4.2:-23940599 | MS.gene39580:CDS |
| TTGTCTCATATCAACACGGC+CGG | 0.584046 | 4.2:+23941005 | None:intergenic |
| CTCATGGCGTTTCTCATCAG+AGG | 0.584747 | 4.2:+23940491 | None:intergenic |
| GGCCATTTGAGGGAGAGAGA+AGG | 0.589016 | 4.2:+23942710 | None:intergenic |
| CATTTGAGGGAGAGAGAAGG+AGG | 0.590783 | 4.2:+23942713 | None:intergenic |
| TCTTCTGGGGAGGCATAGAG+TGG | 0.595890 | 4.2:+23941388 | None:intergenic |
| GAGAGCTTCAGCAAGAGCAA+AGG | 0.595934 | 4.2:-23940151 | MS.gene39580:CDS |
| AAACACAGCCAGGCTTGCTA+AGG | 0.597013 | 4.2:-23940556 | MS.gene39580:CDS |
| TGTAGATAAAGCCAAGGTAA+GGG | 0.598444 | 4.2:+23940616 | None:intergenic |
| CAAATCTCCCAAATTCGTCA+TGG | 0.598894 | 4.2:-23942682 | MS.gene39580:CDS |
| AAATTGATGGATAGGATCCT+CGG | 0.601174 | 4.2:-23940650 | MS.gene39580:intron |
| GGAGATTGATCCTGATGGAA+CGG | 0.607380 | 4.2:-23940436 | MS.gene39580:CDS |
| ACTTTCAGGTGAGGGACGAA+AGG | 0.610348 | 4.2:-23940223 | MS.gene39580:CDS |
| CCAGCACACCTGATGTATGA+TGG | 0.611997 | 4.2:-23940372 | MS.gene39580:CDS |
| CTATTGGAGATTGATCCTGA+TGG | 0.612852 | 4.2:-23940441 | MS.gene39580:CDS |
| AGAAGGAGGATGTTTGTGTG+GGG | 0.612934 | 4.2:+23942727 | None:intergenic |
| GCCCTTGTCCAAATAGCCCA+AGG | 0.616169 | 4.2:+23941084 | None:intergenic |
| TCCTTGGGCTATTTGGACAA+GGG | 0.616511 | 4.2:-23941085 | MS.gene39580:CDS |
| TCTTCGAATCCATCTGAGGA+AGG | 0.617698 | 4.2:+23941264 | None:intergenic |
| GCCAGGCTTGCTAAGGAACG+CGG | 0.621905 | 4.2:-23940549 | MS.gene39580:CDS |
| AGTGAAGGAACTGAGAGAGA+GGG | 0.623958 | 4.2:-23941238 | MS.gene39580:CDS |
| ACTGAGAATAGCCCTTACCT+TGG | 0.627826 | 4.2:-23940627 | MS.gene39580:CDS |
| TGACTTGGAACCAGAACGGA+GGG | 0.629360 | 4.2:+23942653 | None:intergenic |
| ATGAAGTGTAGATAAAGCCA+AGG | 0.630791 | 4.2:+23940610 | None:intergenic |
| TTGCTCTTCGAATCCATCTG+AGG | 0.631251 | 4.2:+23941260 | None:intergenic |
| CAATTTGTCTCATATCAACA+CGG | 0.633578 | 4.2:+23941001 | None:intergenic |
| TCTTTGTGTAAGCAGTCTCA+TGG | 0.635579 | 4.2:+23940475 | None:intergenic |
| CTTGGAACCAGAACGGAGGG+TGG | 0.638218 | 4.2:+23942656 | None:intergenic |
| TGGATTCGAAGAGCAAGTGA+AGG | 0.638840 | 4.2:-23941253 | MS.gene39580:CDS |
| CATTGGAGTCTACACTGCCA+AGG | 0.641019 | 4.2:-23940304 | MS.gene39580:CDS |
| GGTTGCCACCAAGAATCAGA+AGG | 0.645168 | 4.2:-23940182 | MS.gene39580:CDS |
| ATAACCGGACTTTCAGGTGA+GGG | 0.664241 | 4.2:-23940231 | MS.gene39580:CDS |
| ACCAAGAATCAGAAGGCTGG+AGG | 0.675099 | 4.2:-23940175 | MS.gene39580:CDS |
| ATACTGACTTGGAACCAGAA+CGG | 0.677723 | 4.2:+23942649 | None:intergenic |
| TAAGGGCTATTCTCAGTCCG+AGG | 0.684437 | 4.2:+23940633 | None:intergenic |
| CATAACCGGACTTTCAGGTG+AGG | 0.689606 | 4.2:-23940232 | MS.gene39580:CDS |
| CTTCTGGGGAGGCATAGAGT+GGG | 0.692583 | 4.2:+23941389 | None:intergenic |
| TGAACATGCACTTCTCTGGG+AGG | 0.699562 | 4.2:+23941417 | None:intergenic |
| ACAGCTGAAGAAAATAGACA+TGG | 0.709949 | 4.2:-23941057 | MS.gene39580:CDS |
| GGATCGGGCAGAAAATCCTG+TGG | 0.717346 | 4.2:+23941285 | None:intergenic |
| CTGACTTGGAACCAGAACGG+AGG | 0.718153 | 4.2:+23942652 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATAATCAATTATAATTTT+TGG | - | chr4.2:23940800-23940819 | MS.gene39580:intron | 10.0% |
| !!! | TATGATATTGAATTAATTTT+TGG | - | chr4.2:23940336-23940355 | MS.gene39580:CDS | 10.0% |
| !! | AGATTATCATAAAAAAGAAT+CGG | + | chr4.2:23941081-23941100 | None:intergenic | 15.0% |
| !!! | TATTGAATTAATTTTTGGTT+TGG | - | chr4.2:23940341-23940360 | MS.gene39580:CDS | 15.0% |
| !! | ATATCATCAAAATGACAATT+TGG | + | chr4.2:23941192-23941211 | None:intergenic | 20.0% |
| !! | ATATCATTCATTTCTTTAAC+AGG | + | chr4.2:23941286-23941305 | None:intergenic | 20.0% |
| !! | ATTTGAAAATTTCAATCTTC+TGG | + | chr4.2:23941478-23941497 | None:intergenic | 20.0% |
| !! | CAATCAAAAAAACAAAACTA+AGG | + | chr4.2:23940683-23940702 | None:intergenic | 20.0% |
| !! | TGAATTGTTAATATTATTCG+TGG | + | chr4.2:23941242-23941261 | None:intergenic | 20.0% |
| !! | TGATGAATATTTACAGAAAT+TGG | - | chr4.2:23940902-23940921 | MS.gene39580:intron | 20.0% |
| !! | TTTGAAAATTTCAATCTTCT+GGG | + | chr4.2:23941477-23941496 | None:intergenic | 20.0% |
| !!! | CTTTTTTATGATAATCTTGT+TGG | - | chr4.2:23941084-23941103 | MS.gene39580:CDS | 20.0% |
| !!! | GTTTTTTTGATTGTATTCTA+TGG | - | chr4.2:23940690-23940709 | MS.gene39580:intron | 20.0% |
| !!! | TATAATTTTTGGAACTTGTT+GGG | - | chr4.2:23940811-23940830 | MS.gene39580:intron | 20.0% |
| !!! | TGTTTATATCTCTCTAATTT+TGG | - | chr4.2:23942167-23942186 | MS.gene39580:intron | 20.0% |
| !!! | TTATAATTTTTGGAACTTGT+TGG | - | chr4.2:23940810-23940829 | MS.gene39580:intron | 20.0% |
| ! | AAGATACTAGAGAAAAACAT+AGG | + | chr4.2:23940639-23940658 | None:intergenic | 25.0% |
| ! | AGAGGTTGAAAATATTAAGA+AGG | - | chr4.2:23941400-23941419 | MS.gene39580:CDS | 25.0% |
| ! | AGATACTAGAGAAAAACATA+GGG | + | chr4.2:23940638-23940657 | None:intergenic | 25.0% |
| ! | CAAGTCAAAAATGAATTCAA+GGG | + | chr4.2:23942110-23942129 | None:intergenic | 25.0% |
| ! | CTTCGCTATAAATTCAATTT+GGG | - | chr4.2:23940737-23940756 | MS.gene39580:intron | 25.0% |
| ! | TAAAAAAGAATCGGTAAACA+TGG | + | chr4.2:23941072-23941091 | None:intergenic | 25.0% |
| ! | TCAAGTCAAAAATGAATTCA+AGG | + | chr4.2:23942111-23942130 | None:intergenic | 25.0% |
| ! | TGAATGATATTGATACAATC+CGG | - | chr4.2:23941296-23941315 | MS.gene39580:CDS | 25.0% |
| ! | TTGAAAATTTCAATCTTCTG+GGG | + | chr4.2:23941476-23941495 | None:intergenic | 25.0% |
| ! | TTGATTAACCTATGCATTTA+AGG | - | chr4.2:23941142-23941161 | MS.gene39580:CDS | 25.0% |
| ! | TTTATATTTACTTTGCAGAG+AGG | - | chr4.2:23941382-23941401 | MS.gene39580:CDS | 25.0% |
| !! | AAAATTACCGAACTTCATTT+TGG | - | chr4.2:23940997-23941016 | MS.gene39580:CDS | 25.0% |
| !! | GATACTGAATTTGCTTAAAA+TGG | - | chr4.2:23941983-23942002 | MS.gene39580:intron | 25.0% |
| !! | GATTGAAATTTTCAAATCGT+TGG | - | chr4.2:23941481-23941500 | MS.gene39580:intron | 25.0% |
| !!! | ATCAAATTTTAATGAGCCAT+TGG | + | chr4.2:23940955-23940974 | None:intergenic | 25.0% |
| !!! | CATTTTGATGATATCTACAT+GGG | - | chr4.2:23941198-23941217 | MS.gene39580:CDS | 25.0% |
| !!! | TCATTTTGATGATATCTACA+TGG | - | chr4.2:23941197-23941216 | MS.gene39580:CDS | 25.0% |
| !!! | TTTTGCGAATTGATTTATAC+CGG | + | chr4.2:23941318-23941337 | None:intergenic | 25.0% |
| AAGATCATCAATAGATGTCT+CGG | + | chr4.2:23941915-23941934 | None:intergenic | 30.0% | |
| AATGCACGATGAATTGAAAA+AGG | + | chr4.2:23940240-23940259 | None:intergenic | 30.0% | |
| ACTATGCTTAATACTTTGGA+TGG | - | chr4.2:23941710-23941729 | MS.gene39580:intron | 30.0% | |
| AGAACAACAAAGTAATCATC+TGG | + | chr4.2:23941647-23941666 | None:intergenic | 30.0% | |
| AGAACGTTGTGAATATAAGT+TGG | + | chr4.2:23940492-23940511 | None:intergenic | 30.0% | |
| ATCAAATCAAATCAAGCAGA+TGG | + | chr4.2:23940846-23940865 | None:intergenic | 30.0% | |
| ATGCACGATGAATTGAAAAA+GGG | + | chr4.2:23940239-23940258 | None:intergenic | 30.0% | |
| ATTAACCTATGCATTTAAGG+TGG | - | chr4.2:23941145-23941164 | MS.gene39580:CDS | 30.0% | |
| ATTCAGTTGGATTCATGATA+GGG | - | chr4.2:23942736-23942755 | MS.gene39580:CDS | 30.0% | |
| CAAAAGCAAGATCATTTGAA+TGG | - | chr4.2:23941333-23941352 | MS.gene39580:CDS | 30.0% | |
| CAATTTGTCTCATATCAACA+CGG | + | chr4.2:23941850-23941869 | None:intergenic | 30.0% | |
| CCAAACTATGCTTAATACTT+TGG | - | chr4.2:23941706-23941725 | MS.gene39580:intron | 30.0% | |
| GCTTCGCTATAAATTCAATT+TGG | - | chr4.2:23940736-23940755 | MS.gene39580:intron | 30.0% | |
| TGAAAAAGGGATCTGAAAAA+GGG | + | chr4.2:23940226-23940245 | None:intergenic | 30.0% | |
| TTAAGCATAGTTTGGTAAGT+AGG | + | chr4.2:23941701-23941720 | None:intergenic | 30.0% | |
| TTGAAAAAGGGATCTGAAAA+AGG | + | chr4.2:23940227-23940246 | None:intergenic | 30.0% | |
| TTTGGATTGATGGAAATTGA+TGG | - | chr4.2:23942185-23942204 | MS.gene39580:intron | 30.0% | |
| ! | ATTGATGGAAATTGATGGAT+AGG | - | chr4.2:23942190-23942209 | MS.gene39580:intron | 30.0% |
| ! | CCAAAGTATTAAGCATAGTT+TGG | + | chr4.2:23941709-23941728 | None:intergenic | 30.0% |
| ! | GAAATTTTCAAATCGTTGGA+GGG | - | chr4.2:23941485-23941504 | MS.gene39580:intron | 30.0% |
| ! | TCTCTCTAATTTTGGATTGA+TGG | - | chr4.2:23942175-23942194 | MS.gene39580:intron | 30.0% |
| ! | TGAAATTTTCAAATCGTTGG+AGG | - | chr4.2:23941484-23941503 | MS.gene39580:intron | 30.0% |
| !! | AAAGATAGTGGAAAAGCTAT+TGG | - | chr4.2:23942391-23942410 | MS.gene39580:intron | 30.0% |
| !! | AATTTTAATGAGCCATTGGA+CGG | + | chr4.2:23940951-23940970 | None:intergenic | 30.0% |
| !! | AGATGATTACTTTGTTGTTC+TGG | - | chr4.2:23941646-23941665 | MS.gene39580:intron | 30.0% |
| !! | ATATACTTGAGTTTCTGGTT+GGG | - | chr4.2:23942576-23942595 | MS.gene39580:intron | 30.0% |
| !!! | TTTTTGGTTTGGTGAAATGA+TGG | - | chr4.2:23940352-23940371 | MS.gene39580:CDS | 30.0% |
| AACAAGTATCTCTACTTGTC+CGG | - | chr4.2:23941824-23941843 | MS.gene39580:intron | 35.0% | |
| AACACTTCTCTACAGGTTTA+AGG | + | chr4.2:23941538-23941557 | None:intergenic | 35.0% | |
| AAGACAATTCAGTACCTGAT+TGG | - | chr4.2:23941872-23941891 | MS.gene39580:intron | 35.0% | |
| AAGCAAGATCATTTGAATGG+TGG | - | chr4.2:23941336-23941355 | MS.gene39580:CDS | 35.0% | |
| AAGTATATCAGCATAGTCCT+TGG | + | chr4.2:23942564-23942583 | None:intergenic | 35.0% | |
| AATCCAACTGAATGCAAGTT+TGG | + | chr4.2:23942729-23942748 | None:intergenic | 35.0% | |
| ACAGCTGAAGAAAATAGACA+TGG | - | chr4.2:23941791-23941810 | MS.gene39580:intron | 35.0% | |
| AGACAATTCAGTACCTGATT+GGG | - | chr4.2:23941873-23941892 | MS.gene39580:intron | 35.0% | |
| ATGAAGTGTAGATAAAGCCA+AGG | + | chr4.2:23942241-23942260 | None:intergenic | 35.0% | |
| CACAGAGATTCATGTTGAAT+AGG | + | chr4.2:23940779-23940798 | None:intergenic | 35.0% | |
| CAGCAGAATAGTTATCAAAC+AGG | + | chr4.2:23942514-23942533 | None:intergenic | 35.0% | |
| CATTCAGTTGGATTCATGAT+AGG | - | chr4.2:23942735-23942754 | MS.gene39580:CDS | 35.0% | |
| CTACACTTCATTTCAAGAGA+GGG | - | chr4.2:23942250-23942269 | MS.gene39580:intron | 35.0% | |
| TCTACACTTCATTTCAAGAG+AGG | - | chr4.2:23942249-23942268 | MS.gene39580:intron | 35.0% | |
| TGCTGATATACTTGAGTTTC+TGG | - | chr4.2:23942571-23942590 | MS.gene39580:intron | 35.0% | |
| TGTAGATAAAGCCAAGGTAA+GGG | + | chr4.2:23942235-23942254 | None:intergenic | 35.0% | |
| TGTGTTTCCATGCGATATAA+AGG | + | chr4.2:23942279-23942298 | None:intergenic | 35.0% | |
| ! | AAAATTTCAATCTTCTGGGG+AGG | + | chr4.2:23941473-23941492 | None:intergenic | 35.0% |
| ! | AAATTGATGGATAGGATCCT+CGG | - | chr4.2:23942198-23942217 | MS.gene39580:intron | 35.0% |
| ! | AGGTTTAAGGTGAGTCAATA+AGG | + | chr4.2:23941525-23941544 | None:intergenic | 35.0% |
| ! | GCTTTGCATGTATAGTCTTA+TGG | - | chr4.2:23940414-23940433 | MS.gene39580:CDS | 35.0% |
| ! | TGAAAAAGGGAATACTGACT+TGG | + | chr4.2:23940213-23940232 | None:intergenic | 35.0% |
| ! | TTAAACCTGTAGAGAAGTGT+TGG | - | chr4.2:23941537-23941556 | MS.gene39580:intron | 35.0% |
| !! | GATATACTTGAGTTTCTGGT+TGG | - | chr4.2:23942575-23942594 | MS.gene39580:intron | 35.0% |
| !! | GATTACTTTGTTGTTCTGGT+TGG | - | chr4.2:23941650-23941669 | MS.gene39580:intron | 35.0% |
| !! | TGCATGTATAGTCTTATGGT+TGG | - | chr4.2:23940418-23940437 | MS.gene39580:CDS | 35.0% |
| AAAGCAATAACCGTTCCATC+AGG | + | chr4.2:23942425-23942444 | None:intergenic | 40.0% | |
| AATTTATAGCGAAGCCACCT+AGG | + | chr4.2:23940731-23940750 | None:intergenic | 40.0% | |
| ACTTGAACATGCACTTCTCT+GGG | + | chr4.2:23941437-23941456 | None:intergenic | 40.0% | |
| ATAAACGCATATTCCCTAGG+TGG | - | chr4.2:23940714-23940733 | MS.gene39580:intron | 40.0% | |
| ATTTATAGCGAAGCCACCTA+GGG | + | chr4.2:23940730-23940749 | None:intergenic | 40.0% | |
| CAAATCTCCCAAATTCGTCA+TGG | - | chr4.2:23940166-23940185 | MS.gene39580:CDS | 40.0% | |
| CAGTGACAAATTGATGCATC+TGG | + | chr4.2:23942037-23942056 | None:intergenic | 40.0% | |
| CATCCAAACTTGCATTCAGT+TGG | - | chr4.2:23942723-23942742 | MS.gene39580:CDS | 40.0% | |
| CTATTGGAGATTGATCCTGA+TGG | - | chr4.2:23942407-23942426 | MS.gene39580:intron | 40.0% | |
| GACTGCTTACACAAAGATAG+TGG | - | chr4.2:23942379-23942398 | MS.gene39580:intron | 40.0% | |
| GGATATTCAGGATGCTTGTT+TGG | - | chr4.2:23940444-23940463 | MS.gene39580:CDS | 40.0% | |
| GGTATAAACGCATATTCCCT+AGG | - | chr4.2:23940711-23940730 | MS.gene39580:intron | 40.0% | |
| GTGTAGATAAAGCCAAGGTA+AGG | + | chr4.2:23942236-23942255 | None:intergenic | 40.0% | |
| TACCACCACCTTAAATGCAT+AGG | + | chr4.2:23941153-23941172 | None:intergenic | 40.0% | |
| TACTTGAACATGCACTTCTC+TGG | + | chr4.2:23941438-23941457 | None:intergenic | 40.0% | |
| TATCAAACAGGTTGTCGTCT+CGG | + | chr4.2:23942502-23942521 | None:intergenic | 40.0% | |
| TCCTGCAGTCACAAAATTGA+CGG | + | chr4.2:23941024-23941043 | None:intergenic | 40.0% | |
| TCTTTGTGTAAGCAGTCTCA+TGG | + | chr4.2:23942376-23942395 | None:intergenic | 40.0% | |
| TGACGAATTTGGGAGATTTG+AGG | + | chr4.2:23940166-23940185 | None:intergenic | 40.0% | |
| TGACGGTCCAAAATGAAGTT+CGG | + | chr4.2:23941007-23941026 | None:intergenic | 40.0% | |
| TTTCAAATCGTTGGAGGGTT+GGG | - | chr4.2:23941490-23941509 | MS.gene39580:intron | 40.0% | |
| ! | AACCTATGCATTTAAGGTGG+TGG | - | chr4.2:23941148-23941167 | MS.gene39580:CDS | 40.0% |
| ! | GTTTGGTGAAATGATGGTTG+GGG | - | chr4.2:23940358-23940377 | MS.gene39580:CDS | 40.0% |
| ! | TGTTGTTCTGGTTGGAGATA+TGG | - | chr4.2:23941658-23941677 | MS.gene39580:intron | 40.0% |
| ! | TTTTCAAATCGTTGGAGGGT+TGG | - | chr4.2:23941489-23941508 | MS.gene39580:intron | 40.0% |
| !! | ATACTGACTTGGAACCAGAA+CGG | + | chr4.2:23940202-23940221 | None:intergenic | 40.0% |
| !! | GGTTTGGTGAAATGATGGTT+GGG | - | chr4.2:23940357-23940376 | MS.gene39580:CDS | 40.0% |
| !! | GTATAGTCTTATGGTTGGTG+AGG | - | chr4.2:23940423-23940442 | MS.gene39580:CDS | 40.0% |
| !! | TATGGTTGGTGAGGATATTC+AGG | - | chr4.2:23940432-23940451 | MS.gene39580:CDS | 40.0% |
| !! | TGGTTTGGTGAAATGATGGT+TGG | - | chr4.2:23940356-23940375 | MS.gene39580:CDS | 40.0% |
| !! | TTGCTTTTGCTGACATGATG+AGG | - | chr4.2:23942438-23942457 | MS.gene39580:intron | 40.0% |
| AAGTGAAGGAACTGAGAGAG+AGG | - | chr4.2:23941609-23941628 | MS.gene39580:intron | 45.0% | |
| AATCCATCTGAGGAAGGATC+GGG | + | chr4.2:23941581-23941600 | None:intergenic | 45.0% | |
| ACCTGAAAGTCCGGTTATGT+CGG | + | chr4.2:23942615-23942634 | None:intergenic | 45.0% | |
| ACTGAGAATAGCCCTTACCT+TGG | - | chr4.2:23942221-23942240 | MS.gene39580:intron | 45.0% | |
| AGAAGGAGGATGTTTGTGTG+GGG | + | chr4.2:23940124-23940143 | None:intergenic | 45.0% | |
| AGAATCGGTAAACATGGACC+CGG | + | chr4.2:23941066-23941085 | None:intergenic | 45.0% | |
| AGAGAAGGAGGATGTTTGTG+TGG | + | chr4.2:23940126-23940145 | None:intergenic | 45.0% | |
| AGGATGTTTGTGTGGGGAAA+GGG | + | chr4.2:23940118-23940137 | None:intergenic | 45.0% | |
| AGTGAAGGAACTGAGAGAGA+GGG | - | chr4.2:23941610-23941629 | MS.gene39580:intron | 45.0% | |
| ATTCAGTACCTGATTGGGTC+TGG | - | chr4.2:23941878-23941897 | MS.gene39580:intron | 45.0% | |
| GAATCCATCTGAGGAAGGAT+CGG | + | chr4.2:23941582-23941601 | None:intergenic | 45.0% | |
| GAGAAGGAGGATGTTTGTGT+GGG | + | chr4.2:23940125-23940144 | None:intergenic | 45.0% | |
| GATGGAGTTCGTGATGAAAC+AGG | - | chr4.2:23941728-23941747 | MS.gene39580:intron | 45.0% | |
| GGAGATTGATCCTGATGGAA+CGG | - | chr4.2:23942412-23942431 | MS.gene39580:intron | 45.0% | |
| GTGGAAGCCATGACGAATTT+GGG | + | chr4.2:23940176-23940195 | None:intergenic | 45.0% | |
| TCATACAGTCACGATGTTGG+TGG | - | chr4.2:23940925-23940944 | MS.gene39580:intron | 45.0% | |
| TCCAAATAGCCCAAGGAGTA+GGG | + | chr4.2:23941760-23941779 | None:intergenic | 45.0% | |
| TCCTTGGGCTATTTGGACAA+GGG | - | chr4.2:23941763-23941782 | MS.gene39580:intron | 45.0% | |
| TCTTCGAATCCATCTGAGGA+AGG | + | chr4.2:23941587-23941606 | None:intergenic | 45.0% | |
| TGGATTCGAAGAGCAAGTGA+AGG | - | chr4.2:23941595-23941614 | MS.gene39580:intron | 45.0% | |
| TGGTCATACAGTCACGATGT+TGG | - | chr4.2:23940922-23940941 | MS.gene39580:intron | 45.0% | |
| TTACCATTCCAGACCCAATC+AGG | + | chr4.2:23941889-23941908 | None:intergenic | 45.0% | |
| TTGCTCTTCGAATCCATCTG+AGG | + | chr4.2:23941591-23941610 | None:intergenic | 45.0% | |
| TTGTCTCATATCAACACGGC+CGG | + | chr4.2:23941846-23941865 | None:intergenic | 45.0% | |
| TTTGCTCACTGCAGCAAATC+CGG | - | chr4.2:23941044-23941063 | MS.gene39580:CDS | 45.0% | |
| ! | AAGGCACAGGAGTATGTTTG+TGG | - | chr4.2:23942644-23942663 | MS.gene39580:intron | 45.0% |
| ! | ACCGTCAATTTTGTGACTGC+AGG | - | chr4.2:23941020-23941039 | MS.gene39580:CDS | 45.0% |
| ! | AGGCACAGGAGTATGTTTGT+GGG | - | chr4.2:23942645-23942664 | MS.gene39580:intron | 45.0% |
| ! | ATAACCGGACTTTCAGGTGA+GGG | - | chr4.2:23942617-23942636 | MS.gene39580:intron | 45.0% |
| ! | ATTTGAGGCTGGCCATTTGA+GGG | + | chr4.2:23940151-23940170 | None:intergenic | 45.0% |
| ! | GAATTTGGGAGATTTGAGGC+TGG | + | chr4.2:23940162-23940181 | None:intergenic | 45.0% |
| ! | TTGAAGTTGGCTCAGATCTG+TGG | - | chr4.2:23942326-23942345 | MS.gene39580:intron | 45.0% |
| !! | TACTTGAGTTTCTGGTTGGG+AGG | - | chr4.2:23942579-23942598 | MS.gene39580:intron | 45.0% |
| !! | AAAAAAATTAAAAAAAAAAG+TGG | + | chr4.2:23940560-23940579 | None:intergenic | 5.0% |
| ACCAAGAATCAGAAGGCTGG+AGG | - | chr4.2:23942673-23942692 | MS.gene39580:CDS | 50.0% | |
| AGGGCGACCTTTATATCGCA+TGG | - | chr4.2:23942269-23942288 | MS.gene39580:intron | 50.0% | |
| AGTGTAGACTCCAATGCGCT+GGG | + | chr4.2:23942540-23942559 | None:intergenic | 50.0% | |
| CATTGGAGTCTACACTGCCA+AGG | - | chr4.2:23942544-23942563 | MS.gene39580:intron | 50.0% | |
| CATTTGAGGGAGAGAGAAGG+AGG | + | chr4.2:23940138-23940157 | None:intergenic | 50.0% | |
| CCAGCACACCTGATGTATGA+TGG | - | chr4.2:23942476-23942495 | MS.gene39580:intron | 50.0% | |
| CCATCATACATCAGGTGTGC+TGG | + | chr4.2:23942479-23942498 | None:intergenic | 50.0% | |
| CTCATGGCGTTTCTCATCAG+AGG | + | chr4.2:23942360-23942379 | None:intergenic | 50.0% | |
| CTCCTTCTCTCTCCCTCAAA+TGG | - | chr4.2:23940136-23940155 | MS.gene39580:CDS | 50.0% | |
| CTCCTTGGGCTATTTGGACA+AGG | - | chr4.2:23941762-23941781 | MS.gene39580:intron | 50.0% | |
| GAGAGCTTCAGCAAGAGCAA+AGG | - | chr4.2:23942697-23942716 | MS.gene39580:CDS | 50.0% | |
| GAGGATGTTTGTGTGGGGAA+AGG | + | chr4.2:23940119-23940138 | None:intergenic | 50.0% | |
| GGATGTTTGTGTGGGGAAAG+GGG | + | chr4.2:23940117-23940136 | None:intergenic | 50.0% | |
| GGTGGAAGCCATGACGAATT+TGG | + | chr4.2:23940177-23940196 | None:intergenic | 50.0% | |
| GGTTGCCAACACTTCTCTAC+AGG | + | chr4.2:23941545-23941564 | None:intergenic | 50.0% | |
| GGTTGCCACCAAGAATCAGA+AGG | - | chr4.2:23942666-23942685 | MS.gene39580:CDS | 50.0% | |
| GTACCTGATTGGGTCTGGAA+TGG | - | chr4.2:23941883-23941902 | MS.gene39580:intron | 50.0% | |
| GTCCAAATAGCCCAAGGAGT+AGG | + | chr4.2:23941761-23941780 | None:intergenic | 50.0% | |
| TAAGGGCTATTCTCAGTCCG+AGG | + | chr4.2:23942218-23942237 | None:intergenic | 50.0% | |
| TATCGCATGGAAACACAGCC+AGG | - | chr4.2:23942282-23942301 | MS.gene39580:intron | 50.0% | |
| TCCAGCCTTCTGATTCTTGG+TGG | + | chr4.2:23942674-23942693 | None:intergenic | 50.0% | |
| TCCTCCAGCCTTCTGATTCT+TGG | + | chr4.2:23942677-23942696 | None:intergenic | 50.0% | |
| TGAACATGCACTTCTCTGGG+AGG | + | chr4.2:23941434-23941453 | None:intergenic | 50.0% | |
| TGGTGAAATGATGGTTGGGG+TGG | - | chr4.2:23940361-23940380 | MS.gene39580:CDS | 50.0% | |
| TTGCTCACTGCAGCAAATCC+GGG | - | chr4.2:23941045-23941064 | MS.gene39580:CDS | 50.0% | |
| ! | ACTTTCAGGTGAGGGACGAA+AGG | - | chr4.2:23942625-23942644 | MS.gene39580:intron | 50.0% |
| ! | CATAACCGGACTTTCAGGTG+AGG | - | chr4.2:23942616-23942635 | MS.gene39580:intron | 50.0% |
| ! | GATTTGAGGCTGGCCATTTG+AGG | + | chr4.2:23940152-23940171 | None:intergenic | 50.0% |
| ! | TGACTTGGAACCAGAACGGA+GGG | + | chr4.2:23940198-23940217 | None:intergenic | 50.0% |
| !! | AAACACAGCCAGGCTTGCTA+AGG | - | chr4.2:23942292-23942311 | MS.gene39580:intron | 50.0% |
| !! | AGAGAAGTGTTGGCAACCAC+AGG | - | chr4.2:23941547-23941566 | MS.gene39580:intron | 50.0% |
| !! | TTGAGTTTCTGGTTGGGAGG+TGG | - | chr4.2:23942582-23942601 | MS.gene39580:intron | 50.0% |
| AATAGCCCAAGGAGTAGGGC+TGG | + | chr4.2:23941756-23941775 | None:intergenic | 55.0% | |
| CAGTGTAGACTCCAATGCGC+TGG | + | chr4.2:23942541-23942560 | None:intergenic | 55.0% | |
| CGTCTCGGCCATCATACATC+AGG | + | chr4.2:23942487-23942506 | None:intergenic | 55.0% | |
| GCCACCAAGAATCAGAAGGC+TGG | - | chr4.2:23942670-23942689 | MS.gene39580:CDS | 55.0% | |
| GCCCTACTCCTTGGGCTATT+TGG | - | chr4.2:23941756-23941775 | MS.gene39580:intron | 55.0% | |
| GCCCTTGTCCAAATAGCCCA+AGG | + | chr4.2:23941767-23941786 | None:intergenic | 55.0% | |
| GCCGACATAACCGGACTTTC+AGG | - | chr4.2:23942611-23942630 | MS.gene39580:intron | 55.0% | |
| GGATCGGGCAGAAAATCCTG+TGG | + | chr4.2:23941566-23941585 | None:intergenic | 55.0% | |
| GGCCATTTGAGGGAGAGAGA+AGG | + | chr4.2:23940141-23940160 | None:intergenic | 55.0% | |
| GGGCTATTTGGACAAGGGCA+TGG | - | chr4.2:23941768-23941787 | MS.gene39580:intron | 55.0% | |
| TCGTCCCTCACCTGAAAGTC+CGG | + | chr4.2:23942624-23942643 | None:intergenic | 55.0% | |
| TGGAAGGTGGCCGACATAAC+CGG | - | chr4.2:23942602-23942621 | MS.gene39580:intron | 55.0% | |
| ! | CTTCTGGGGAGGCATAGAGT+GGG | + | chr4.2:23941462-23941481 | None:intergenic | 55.0% |
| ! | GGAACGCGGCGATTTGAAGT+TGG | - | chr4.2:23942313-23942332 | MS.gene39580:intron | 55.0% |
| ! | TCTTCTGGGGAGGCATAGAG+TGG | + | chr4.2:23941463-23941482 | None:intergenic | 55.0% |
| !! | CTGACTTGGAACCAGAACGG+AGG | + | chr4.2:23940199-23940218 | None:intergenic | 55.0% |
| !! | GTTTCTGGTTGGGAGGTGGA+AGG | - | chr4.2:23942586-23942605 | MS.gene39580:intron | 55.0% |
| AGGTGCCAGCCCTACTCCTT+GGG | - | chr4.2:23941748-23941767 | MS.gene39580:intron | 60.0% | |
| ATCGTTGGAGGGTTGGGCTG+AGG | - | chr4.2:23941496-23941515 | MS.gene39580:intron | 60.0% | |
| ATGGCTTCCACCCTCCGTTC+TGG | - | chr4.2:23940185-23940204 | MS.gene39580:CDS | 60.0% | |
| CTGCCCGATCCTTCCTCAGA+TGG | - | chr4.2:23941575-23941594 | MS.gene39580:intron | 60.0% | |
| CTTGGAACCAGAACGGAGGG+TGG | + | chr4.2:23940195-23940214 | None:intergenic | 60.0% | |
| TCTGCTGTTGCCCAGCGCAT+TGG | - | chr4.2:23942527-23942546 | MS.gene39580:intron | 60.0% | |
| TCTGGTTGGGAGGTGGAAGG+TGG | - | chr4.2:23942589-23942608 | MS.gene39580:intron | 60.0% | |
| ! | AGGTGAGGGACGAAAGGCAC+AGG | - | chr4.2:23942631-23942650 | MS.gene39580:intron | 60.0% |
| !! | CGATGTTGGTGGCCGTCCAA+TGG | - | chr4.2:23940936-23940955 | MS.gene39580:intron | 60.0% |
| !! | GCCAGGCTTGCTAAGGAACG+CGG | - | chr4.2:23942299-23942318 | MS.gene39580:intron | 60.0% |
| CAGGTGCCAGCCCTACTCCT+TGG | - | chr4.2:23941747-23941766 | MS.gene39580:intron | 65.0% | |
| GCCGCGTTCCTTAGCAAGCC+TGG | + | chr4.2:23942303-23942322 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 23940098 | 23942772 | 23940098 | ID=MS.gene39580 |
| chr4.2 | mRNA | 23940098 | 23942772 | 23940098 | ID=MS.gene39580.t1;Parent=MS.gene39580 |
| chr4.2 | exon | 23942657 | 23942772 | 23942657 | ID=MS.gene39580.t1.exon1;Parent=MS.gene39580.t1 |
| chr4.2 | CDS | 23942657 | 23942772 | 23942657 | ID=cds.MS.gene39580.t1;Parent=MS.gene39580.t1 |
| chr4.2 | exon | 23940966 | 23941470 | 23940966 | ID=MS.gene39580.t1.exon2;Parent=MS.gene39580.t1 |
| chr4.2 | CDS | 23940966 | 23941470 | 23940966 | ID=cds.MS.gene39580.t1;Parent=MS.gene39580.t1 |
| chr4.2 | exon | 23940098 | 23940658 | 23940098 | ID=MS.gene39580.t1.exon3;Parent=MS.gene39580.t1 |
| chr4.2 | CDS | 23940098 | 23940658 | 23940098 | ID=cds.MS.gene39580.t1;Parent=MS.gene39580.t1 |
| Gene Sequence |
| Protein sequence |
