Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39661.t1 | XP_003626834.1 | 98 | 602 | 12 | 0 | 1 | 602 | 21 | 622 | 0.00E+00 | 1181.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39661.t1 | F4HVY0 | 59.3 | 604 | 241 | 2 | 1 | 599 | 21 | 624 | 2.0e-218 | 760.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39661.t1 | G7LDH6 | 98.0 | 602 | 12 | 0 | 1 | 602 | 21 | 622 | 0.0e+00 | 1181.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050404 | MS.gene39661 | 0.8216 | 3.71E-53 | -1.69E-46 |
| MS.gene050406 | MS.gene39661 | 0.800404 | 1.46E-48 | -1.69E-46 |
| MS.gene051171 | MS.gene39661 | 0.803253 | 3.81E-49 | -1.69E-46 |
| MS.gene051242 | MS.gene39661 | 0.821592 | 3.72E-53 | -1.69E-46 |
| MS.gene051244 | MS.gene39661 | 0.812316 | 4.51E-51 | -1.69E-46 |
| MS.gene052340 | MS.gene39661 | 0.808008 | 3.83E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene39661 | 0.802749 | 4.84E-49 | -1.69E-46 |
| MS.gene053557 | MS.gene39661 | 0.810187 | 1.31E-50 | -1.69E-46 |
| MS.gene055254 | MS.gene39661 | 0.817369 | 3.42E-52 | -1.69E-46 |
| MS.gene056664 | MS.gene39661 | 0.80791 | 4.01E-50 | -1.69E-46 |
| MS.gene059894 | MS.gene39661 | 0.835799 | 1.36E-56 | -1.69E-46 |
| MS.gene059974 | MS.gene39661 | 0.810503 | 1.12E-50 | -1.69E-46 |
| MS.gene060407 | MS.gene39661 | 0.81011 | 1.36E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene39661 | MS.gene018395 | PPI |
| MS.gene57954 | MS.gene39661 | PPI |
| MS.gene39661 | MS.gene035646 | PPI |
| MS.gene39661 | MS.gene87888 | PPI |
| MS.gene012465 | MS.gene39661 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39661.t1 | MTR_8g009560 | 98.173 | 602 | 11 | 0 | 1 | 602 | 21 | 622 | 0.0 | 1234 |
| MS.gene39661.t1 | MTR_8g009590 | 64.047 | 598 | 214 | 1 | 1 | 597 | 57 | 654 | 0.0 | 808 |
| MS.gene39661.t1 | MTR_7g090100 | 65.546 | 595 | 199 | 2 | 2 | 596 | 22 | 610 | 0.0 | 803 |
| MS.gene39661.t1 | MTR_7g090120 | 64.538 | 595 | 207 | 2 | 2 | 596 | 22 | 612 | 0.0 | 792 |
| MS.gene39661.t1 | MTR_7g090140 | 64.262 | 596 | 208 | 2 | 2 | 597 | 22 | 612 | 0.0 | 787 |
| MS.gene39661.t1 | MTR_4g054290 | 64.262 | 596 | 209 | 2 | 2 | 597 | 22 | 613 | 0.0 | 772 |
| MS.gene39661.t1 | MTR_4g054150 | 62.396 | 601 | 201 | 3 | 2 | 602 | 22 | 597 | 0.0 | 741 |
| MS.gene39661.t1 | MTR_7g090140 | 64.740 | 519 | 181 | 1 | 79 | 597 | 1 | 517 | 0.0 | 692 |
| MS.gene39661.t1 | MTR_4g129630 | 33.937 | 607 | 389 | 6 | 1 | 595 | 18 | 624 | 2.56e-123 | 378 |
| MS.gene39661.t1 | MTR_8g009550 | 89.333 | 75 | 5 | 1 | 152 | 226 | 16 | 87 | 1.92e-38 | 137 |
| MS.gene39661.t1 | MTR_4g054320 | 73.585 | 53 | 14 | 0 | 545 | 597 | 43 | 95 | 1.22e-24 | 98.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39661.t1 | AT1G02205 | 61.093 | 604 | 230 | 2 | 1 | 599 | 22 | 625 | 0.0 | 775 |
| MS.gene39661.t1 | AT1G02205 | 61.093 | 604 | 230 | 2 | 1 | 599 | 21 | 624 | 0.0 | 774 |
| MS.gene39661.t1 | AT1G02205 | 60.427 | 609 | 231 | 2 | 1 | 599 | 21 | 629 | 0.0 | 771 |
| MS.gene39661.t1 | AT1G02190 | 57.190 | 605 | 246 | 6 | 1 | 595 | 21 | 622 | 0.0 | 692 |
| MS.gene39661.t1 | AT1G02190 | 57.190 | 605 | 242 | 7 | 1 | 595 | 21 | 618 | 0.0 | 687 |
| MS.gene39661.t1 | AT2G37700 | 56.594 | 599 | 252 | 3 | 1 | 595 | 21 | 615 | 0.0 | 678 |
| MS.gene39661.t1 | AT2G37700 | 56.427 | 599 | 244 | 4 | 1 | 595 | 21 | 606 | 0.0 | 671 |
| MS.gene39661.t1 | AT2G37700 | 52.421 | 599 | 240 | 4 | 1 | 595 | 21 | 578 | 0.0 | 605 |
| MS.gene39661.t1 | AT1G02205 | 59.382 | 453 | 179 | 2 | 152 | 599 | 8 | 460 | 0.0 | 577 |
| MS.gene39661.t1 | AT2G37700 | 58.114 | 456 | 186 | 2 | 1 | 455 | 21 | 472 | 0.0 | 521 |
| MS.gene39661.t1 | AT1G02205 | 56.614 | 378 | 159 | 2 | 227 | 599 | 8 | 385 | 3.54e-163 | 471 |
| MS.gene39661.t1 | AT5G57800 | 33.773 | 607 | 387 | 6 | 1 | 592 | 18 | 624 | 1.14e-115 | 358 |
Find 115 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGATTTCATGAATAATT+TGG | 0.071224 | 8.3:+79432384 | MS.gene39661:CDS |
| CCAATTTATGATTACATCTA+TGG | 0.221817 | 8.3:+79434698 | MS.gene39661:CDS |
| TCCCAATCTTAGTTGATATA+TGG | 0.227104 | 8.3:-79434822 | None:intergenic |
| TCATGTGGCCATTCACCTTT+TGG | 0.234069 | 8.3:+79434894 | MS.gene39661:CDS |
| CTCGAAGTCCCAGAAGAATT+TGG | 0.242161 | 8.3:+79436273 | MS.gene39661:CDS |
| AGCATCCTCACCATCATATA+TGG | 0.248897 | 8.3:-79430546 | None:intergenic |
| CTTAGTTGATATATGGATTC+AGG | 0.250871 | 8.3:-79434815 | None:intergenic |
| CTGGGAAAACCAAATTCTTC+TGG | 0.252091 | 8.3:-79436282 | None:intergenic |
| TTTGGAGGGAATTGGGAAAA+TGG | 0.256646 | 8.3:-79436533 | None:intergenic |
| TGTTTAGCATTGACAAAATA+TGG | 0.263713 | 8.3:+79437161 | MS.gene39661:CDS |
| GAGTGGACATTGGATAAATT+AGG | 0.267216 | 8.3:-79436608 | None:intergenic |
| GAAATTTCTTTGGAGGGAAT+TGG | 0.270137 | 8.3:-79436541 | None:intergenic |
| GGATGCTACATGACCAAATT+TGG | 0.279073 | 8.3:+79430562 | MS.gene39661:CDS |
| AAGATGGAGAAGACTTTCTT+AGG | 0.303702 | 8.3:-79432430 | None:intergenic |
| GTAATTGCTGTTGTGTATAA+TGG | 0.316269 | 8.3:-79432319 | None:intergenic |
| AACAATCTTCATCTTAAGTT+GGG | 0.326096 | 8.3:-79435929 | None:intergenic |
| CCATAGATGTAATCATAAAT+TGG | 0.332696 | 8.3:-79434698 | None:intergenic |
| AGTGGACATTGGATAAATTA+GGG | 0.340224 | 8.3:-79436607 | None:intergenic |
| ATTGATTTCATGAATAATTT+GGG | 0.340630 | 8.3:+79432385 | MS.gene39661:CDS |
| CATGCACTCATGACTCTTCT+TGG | 0.342220 | 8.3:-79437076 | None:intergenic |
| ATGAACGTCCCAACCTTCTA+AGG | 0.344095 | 8.3:-79437122 | None:intergenic |
| TTCACATAAAGCATTAACTA+TGG | 0.360665 | 8.3:-79436049 | None:intergenic |
| ATCCATATATCAACTAAGAT+TGG | 0.361402 | 8.3:+79434820 | MS.gene39661:CDS |
| GGAATATTGCACGCCTTAGA+AGG | 0.363668 | 8.3:+79437109 | MS.gene39661:CDS |
| ACCTTTGCAGAATTTGATCC+TGG | 0.365054 | 8.3:-79436301 | None:intergenic |
| ATATGCTCAATTTGCAATCA+TGG | 0.374703 | 8.3:+79434975 | MS.gene39661:CDS |
| ATGGTGAACTATACATTAAA+AGG | 0.375204 | 8.3:+79435902 | MS.gene39661:CDS |
| GAGATAAAGAGATCCAAATT+TGG | 0.381279 | 8.3:-79430575 | None:intergenic |
| CACTACATCATACACAATTT+CGG | 0.388068 | 8.3:+79434654 | MS.gene39661:CDS |
| CAGTGGAGTTTCTTTACTAT+TGG | 0.392734 | 8.3:+79431235 | MS.gene39661:CDS |
| CTTAAGATGAAGATTGTTGA+TGG | 0.396304 | 8.3:+79435934 | MS.gene39661:CDS |
| GGTACGAACAATGATCCTTT+TGG | 0.398165 | 8.3:-79436512 | None:intergenic |
| AGCAGAGTTGAGCAAAGTTA+AGG | 0.398577 | 8.3:+79435165 | MS.gene39661:CDS |
| CAACAATCTTCATCTTAAGT+TGG | 0.401690 | 8.3:-79435930 | None:intergenic |
| AAATTTCTTTGGAGGGAATT+GGG | 0.405095 | 8.3:-79436540 | None:intergenic |
| GCATCCATAGCATCATTTGC+TGG | 0.414049 | 8.3:+79432349 | MS.gene39661:CDS |
| TGGGAAAACCAAATTCTTCT+GGG | 0.421201 | 8.3:-79436281 | None:intergenic |
| ATGAGTGCATGGCGTATTGC+TGG | 0.430094 | 8.3:+79437088 | MS.gene39661:CDS |
| ATACTTAAGGATTGGAAAGA+TGG | 0.436601 | 8.3:-79432446 | None:intergenic |
| TTTGGTCTGTTCTTGTCACT+TGG | 0.441280 | 8.3:+79434912 | MS.gene39661:CDS |
| AGTTAATGCTTTATGTGAAA+GGG | 0.442526 | 8.3:+79436053 | MS.gene39661:CDS |
| TGTGAATAGTCCAGAGGAAA+AGG | 0.447569 | 8.3:+79430500 | MS.gene39661:CDS |
| GTGTATACATGGTATACTTA+AGG | 0.448902 | 8.3:-79432459 | None:intergenic |
| CAAATTCTTCTGGGACTTCG+AGG | 0.450017 | 8.3:-79436272 | None:intergenic |
| TCCATATATCAACTAAGATT+GGG | 0.460592 | 8.3:+79434821 | MS.gene39661:CDS |
| CACACCACTAGTTCTCCATA+TGG | 0.461271 | 8.3:-79431184 | None:intergenic |
| GGAGACTTGCTCAATAGATA+TGG | 0.468212 | 8.3:+79435883 | MS.gene39661:CDS |
| AATAGACTATAATTCAATCA+AGG | 0.470808 | 8.3:-79437231 | None:intergenic |
| ATGACAATTCTTCTACATAG+TGG | 0.472384 | 8.3:+79431210 | MS.gene39661:CDS |
| AGATTGAGGTGAGGAGGCTA+AGG | 0.474871 | 8.3:-79434852 | None:intergenic |
| AGGATAAACTCACAAGTGAT+TGG | 0.476857 | 8.3:-79431333 | None:intergenic |
| ATTGCACGCCTTAGAAGGTT+GGG | 0.477526 | 8.3:+79437114 | MS.gene39661:CDS |
| CTTACTTGAACATGGAACCT+TGG | 0.484638 | 8.3:-79435004 | None:intergenic |
| TGTGTCAAATGCACCACATC+TGG | 0.484985 | 8.3:-79434782 | None:intergenic |
| TAGGCTATGTGTTCTGCAAA+TGG | 0.488094 | 8.3:-79432277 | None:intergenic |
| TATGCTCAATTTGCAATCAT+GGG | 0.489138 | 8.3:+79434976 | MS.gene39661:CDS |
| TAGTTAATGCTTTATGTGAA+AGG | 0.495081 | 8.3:+79436052 | MS.gene39661:CDS |
| AATTTGCAGATATGGCTAGT+TGG | 0.497195 | 8.3:+79436455 | MS.gene39661:intron |
| GAGAATGATATCTAGAGTAA+AGG | 0.501151 | 8.3:-79431284 | None:intergenic |
| GCATCCTCACCATCATATAT+GGG | 0.502244 | 8.3:-79430545 | None:intergenic |
| TATTGCACGCCTTAGAAGGT+TGG | 0.503606 | 8.3:+79437113 | MS.gene39661:CDS |
| TGCAATCATGGGTTATTCCA+AGG | 0.508500 | 8.3:+79434987 | MS.gene39661:CDS |
| TACATGGTATACTTAAGGAT+TGG | 0.514880 | 8.3:-79432454 | None:intergenic |
| AGTGATTGGTTCTGTAACAA+TGG | 0.518902 | 8.3:-79431319 | None:intergenic |
| TTTATGTGAAAGGGGTACTA+AGG | 0.519400 | 8.3:+79436062 | MS.gene39661:CDS |
| CCCAGGATCAAATTCTGCAA+AGG | 0.521549 | 8.3:+79436300 | MS.gene39661:CDS |
| CCTCATCTTCCCATATATGA+TGG | 0.523645 | 8.3:+79430536 | MS.gene39661:CDS |
| TCTCGCCATCGAACCGCCAA+AGG | 0.525130 | 8.3:+79430594 | MS.gene39661:CDS |
| TGTGTGCTCTTTGCTATGAA+TGG | 0.527943 | 8.3:-79430468 | None:intergenic |
| CCTTTGCAGAATTTGATCCT+GGG | 0.531383 | 8.3:-79436300 | None:intergenic |
| CCTCAAAACTTACTTGAACA+TGG | 0.536086 | 8.3:-79435012 | None:intergenic |
| ATATGGATTCAGGAGTAGTA+AGG | 0.537682 | 8.3:-79434805 | None:intergenic |
| AAGTTGATCGAGAAAGCAAT+TGG | 0.540340 | 8.3:+79430655 | MS.gene39661:CDS |
| AGTGACAAGAACAGACCAAA+AGG | 0.542812 | 8.3:-79434909 | None:intergenic |
| ATAACCAGCAAATGATGCTA+TGG | 0.543759 | 8.3:-79432353 | None:intergenic |
| TGAATGGCCACATGAAATAG+AGG | 0.548660 | 8.3:-79434886 | None:intergenic |
| ATAGACTATAATTCAATCAA+GGG | 0.551441 | 8.3:-79437230 | None:intergenic |
| CCTCACCTCAATCTTCTGAA+TGG | 0.552731 | 8.3:+79434861 | MS.gene39661:CDS |
| GGCAAGCAAGTCTTCAGCAT+GGG | 0.559393 | 8.3:+79437182 | MS.gene39661:CDS |
| AAGTTTAGGTCTTTCAAACC+AGG | 0.561043 | 8.3:+79435192 | MS.gene39661:CDS |
| GATTGTTGATGGCAGTAGCT+TGG | 0.561867 | 8.3:+79435945 | MS.gene39661:CDS |
| AGGGGATGATTAATCTTCAA+AGG | 0.562894 | 8.3:-79437211 | None:intergenic |
| GGTTGGGACGTTCATGAATG+TGG | 0.564471 | 8.3:+79437130 | MS.gene39661:CDS |
| AGAAGAAGGTGCACCAGATG+TGG | 0.564679 | 8.3:+79434769 | MS.gene39661:CDS |
| TACTTACGATGGTGTATACA+TGG | 0.565128 | 8.3:-79432470 | None:intergenic |
| AATTCATTGAAGAAAGAAGA+AGG | 0.567139 | 8.3:+79434755 | MS.gene39661:CDS |
| AGAACAGACCAAAAGGTGAA+TGG | 0.569915 | 8.3:-79434902 | None:intergenic |
| ACACCACTAGTTCTCCATAT+GGG | 0.576378 | 8.3:-79431183 | None:intergenic |
| TGCTGTTGTGTATAATGGAA+TGG | 0.580525 | 8.3:-79432314 | None:intergenic |
| CCATCATATATGGGAAGATG+AGG | 0.585846 | 8.3:-79430536 | None:intergenic |
| CAAGAAGAGTCATGAGTGCA+TGG | 0.587562 | 8.3:+79437077 | MS.gene39661:CDS |
| GTTAATGCTTTATGTGAAAG+GGG | 0.588643 | 8.3:+79436054 | MS.gene39661:CDS |
| ACAATCTTCATCTTAAGTTG+GGG | 0.589510 | 8.3:-79435928 | None:intergenic |
| ATCTACTAACCTCACAAGAG+TGG | 0.589871 | 8.3:-79436625 | None:intergenic |
| ATCCAATGTCCACTCTTGTG+AGG | 0.593116 | 8.3:+79436616 | MS.gene39661:CDS |
| TTCAGAAGATTGAGGTGAGG+AGG | 0.601115 | 8.3:-79434858 | None:intergenic |
| AGGTACCATTCAGAAGATTG+AGG | 0.601316 | 8.3:-79434866 | None:intergenic |
| TCTTTGTGGTAAACTTGACA+AGG | 0.603730 | 8.3:+79436017 | MS.gene39661:CDS |
| TCTTCTACATAGTGGACCAG+TGG | 0.617911 | 8.3:+79431218 | MS.gene39661:CDS |
| GTGGACATTGGATAAATTAG+GGG | 0.619031 | 8.3:-79436606 | None:intergenic |
| TCTTCCCATATATGATGGTG+AGG | 0.622744 | 8.3:+79430541 | MS.gene39661:CDS |
| TTGCCCATATGGAGAACTAG+TGG | 0.623820 | 8.3:+79431180 | MS.gene39661:CDS |
| AACCTCACAAGAGTGGACAT+TGG | 0.630620 | 8.3:-79436618 | None:intergenic |
| CAATAGTAAAGAAACTCCAC+TGG | 0.634669 | 8.3:-79431234 | None:intergenic |
| TAGACTATAATTCAATCAAG+GGG | 0.637835 | 8.3:-79437229 | None:intergenic |
| TGGCAAGCAAGTCTTCAGCA+TGG | 0.640804 | 8.3:+79437181 | MS.gene39661:CDS |
| AATGGTACCTCTATTTCATG+TGG | 0.646040 | 8.3:+79434879 | MS.gene39661:CDS |
| TGGACATTGGATAAATTAGG+GGG | 0.663725 | 8.3:-79436605 | None:intergenic |
| TTTCATTGTGAATAGTCCAG+AGG | 0.668809 | 8.3:+79430494 | MS.gene39661:CDS |
| GGAAGATGAGGAAGTTACTG+AGG | 0.681674 | 8.3:-79430524 | None:intergenic |
| AGTTGGAGATCAATGTGAGG+AGG | 0.689214 | 8.3:+79436472 | MS.gene39661:CDS |
| ATTGTGTATGATGTAGTGAG+TGG | 0.695326 | 8.3:-79434649 | None:intergenic |
| CCATTCAGAAGATTGAGGTG+AGG | 0.698317 | 8.3:-79434861 | None:intergenic |
| GCTAGTTGGAGATCAATGTG+AGG | 0.727664 | 8.3:+79436469 | MS.gene39661:CDS |
| CATATGGAGAACTAGTGGTG+TGG | 0.755315 | 8.3:+79431185 | MS.gene39661:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAATAATTTTTATTTTTA+AGG | + | chr8.3:79435043-79435062 | MS.gene39661:intron | 0.0% |
| !! | AATGATCAAATATTAAATTA+AGG | + | chr8.3:79431048-79431067 | MS.gene39661:intron | 10.0% |
| !! | TTATAATGAATTGAAATTAA+CGG | - | chr8.3:79433246-79433265 | None:intergenic | 10.0% |
| !! | TTTAACTAATATAAGTTAAA+AGG | + | chr8.3:79432811-79432830 | MS.gene39661:intron | 10.0% |
| !! | AAATCATAAGAAGAAAAAAA+AGG | - | chr8.3:79434571-79434590 | None:intergenic | 15.0% |
| !! | AAGACATATATAAATATACA+TGG | + | chr8.3:79431003-79431022 | MS.gene39661:intron | 15.0% |
| !! | AATCATAAGAAGAAAAAAAA+GGG | - | chr8.3:79434570-79434589 | None:intergenic | 15.0% |
| !! | AATTAAATATCGAAATATGA+TGG | + | chr8.3:79432557-79432576 | MS.gene39661:intron | 15.0% |
| !! | ACATATTAATTAACAATCTA+GGG | - | chr8.3:79432175-79432194 | None:intergenic | 15.0% |
| !! | ATCAAACATTATAAAATTAG+AGG | - | chr8.3:79435223-79435242 | None:intergenic | 15.0% |
| !! | ATTTATATATGTCTTTAAGT+TGG | - | chr8.3:79430998-79431017 | None:intergenic | 15.0% |
| !! | CTAATATCTTCAATTTAATT+TGG | + | chr8.3:79432236-79432255 | MS.gene39661:intron | 15.0% |
| !! | CTACTAAATTATTTAAGAAT+TGG | + | chr8.3:79436701-79436720 | MS.gene39661:intron | 15.0% |
| !! | TAAATGAAAAAAAAGCTTAA+AGG | + | chr8.3:79435794-79435813 | MS.gene39661:intron | 15.0% |
| !! | TGATAGTAACTATTTATATT+GGG | + | chr8.3:79433758-79433777 | MS.gene39661:intron | 15.0% |
| !! | TTAATTAACCTCTAATAAAA+GGG | + | chr8.3:79433691-79433710 | MS.gene39661:intron | 15.0% |
| !! | TTGTATATTCAATATCTTAA+TGG | + | chr8.3:79432610-79432629 | MS.gene39661:intron | 15.0% |
| !! | TTTAATTAACCTCTAATAAA+AGG | + | chr8.3:79433690-79433709 | MS.gene39661:intron | 15.0% |
| !! | TTTAGTCTAAGTATTTAATA+TGG | + | chr8.3:79433381-79433400 | MS.gene39661:intron | 15.0% |
| !!! | AAATTATTTTGGTTTCATTT+TGG | + | chr8.3:79435624-79435643 | MS.gene39661:intron | 15.0% |
| !!! | AAGTTGGAAATTTTATAATA+GGG | - | chr8.3:79430982-79431001 | None:intergenic | 15.0% |
| !!! | AATATTTTTTTTTTGTGTGT+AGG | + | chr8.3:79431088-79431107 | MS.gene39661:intron | 15.0% |
| !!! | AATGCATTGATATTTTATAT+TGG | + | chr8.3:79431129-79431148 | MS.gene39661:CDS | 15.0% |
| !!! | ATATAATTTCGTTTTTGAAA+TGG | + | chr8.3:79434339-79434358 | MS.gene39661:intron | 15.0% |
| !!! | ATATTTTTTTTTTGTGTGTA+GGG | + | chr8.3:79431089-79431108 | MS.gene39661:intron | 15.0% |
| !!! | ATCTTTATTTCCATATTATT+GGG | - | chr8.3:79431396-79431415 | None:intergenic | 15.0% |
| !!! | ATTGATTTCATGAATAATTT+GGG | + | chr8.3:79432385-79432404 | MS.gene39661:CDS | 15.0% |
| !!! | GTCAATACATATAATTTTTT+TGG | + | chr8.3:79435488-79435507 | MS.gene39661:intron | 15.0% |
| !!! | TAAGTTGGAAATTTTATAAT+AGG | - | chr8.3:79430983-79431002 | None:intergenic | 15.0% |
| !!! | TAATTTCATTCCTTTTAAAT+GGG | + | chr8.3:79432635-79432654 | MS.gene39661:intron | 15.0% |
| !!! | TAGTAATTTTGAATTAATAG+CGG | + | chr8.3:79432933-79432952 | MS.gene39661:intron | 15.0% |
| !!! | TTAATAGAGTTTTTTTTATG+TGG | + | chr8.3:79432904-79432923 | MS.gene39661:intron | 15.0% |
| !!! | TTAATTTCATTCCTTTTAAA+TGG | + | chr8.3:79432634-79432653 | MS.gene39661:intron | 15.0% |
| !!! | TTAATTTTGTTCATTCAATT+TGG | - | chr8.3:79431683-79431702 | None:intergenic | 15.0% |
| !!! | TTATAATGTTTGATTTTACA+CGG | + | chr8.3:79435229-79435248 | MS.gene39661:intron | 15.0% |
| !!! | TTGATAGTAACTATTTATAT+TGG | + | chr8.3:79433757-79433776 | MS.gene39661:intron | 15.0% |
| !!! | TTTGGTTCTTTAAATTATTT+TGG | + | chr8.3:79435613-79435632 | MS.gene39661:intron | 15.0% |
| !!! | TTTTGTAGTATCTTTTTAAA+TGG | + | chr8.3:79435098-79435117 | MS.gene39661:intron | 15.0% |
| !!! | TTTTTGGCTAAATTATATTT+TGG | + | chr8.3:79435504-79435523 | MS.gene39661:intron | 15.0% |
| !! | AAAAGAAAATTTAATTGTGG+TGG | - | chr8.3:79431529-79431548 | None:intergenic | 20.0% |
| !! | AAATAGATGTAGCAATATAA+TGG | + | chr8.3:79431826-79431845 | MS.gene39661:intron | 20.0% |
| !! | AATAGATGTAGCAATATAAT+GGG | + | chr8.3:79431827-79431846 | MS.gene39661:intron | 20.0% |
| !! | AATTATGAAGGTAAAAAACT+AGG | + | chr8.3:79433566-79433585 | MS.gene39661:intron | 20.0% |
| !! | ACCAAATTTATTAGATAAAG+AGG | + | chr8.3:79434455-79434474 | MS.gene39661:intron | 20.0% |
| !! | ACTTATAAAACCATTTGTAA+GGG | - | chr8.3:79433964-79433983 | None:intergenic | 20.0% |
| !! | AGTGGTTATATATTATAACT+CGG | - | chr8.3:79434274-79434293 | None:intergenic | 20.0% |
| !! | ATAACATCACAATATATACA+AGG | - | chr8.3:79436754-79436773 | None:intergenic | 20.0% |
| !! | ATTAAAGATGCTTACATATA+AGG | - | chr8.3:79433676-79433695 | None:intergenic | 20.0% |
| !! | CACATATTAATTAACAATCT+AGG | - | chr8.3:79432176-79432195 | None:intergenic | 20.0% |
| !! | GAATGAACAAAATTAAAGAT+GGG | + | chr8.3:79431687-79431706 | MS.gene39661:intron | 20.0% |
| !! | GAGAAAAGAAAATTTAATTG+TGG | - | chr8.3:79431532-79431551 | None:intergenic | 20.0% |
| !! | TACACATATTATAGTAAGAA+AGG | - | chr8.3:79434541-79434560 | None:intergenic | 20.0% |
| !! | TACTTATAAAACCATTTGTA+AGG | - | chr8.3:79433965-79433984 | None:intergenic | 20.0% |
| !! | TCCTCTTTATCTAATAAATT+TGG | - | chr8.3:79434459-79434478 | None:intergenic | 20.0% |
| !! | TCTTTGATATACATTAAGTT+AGG | + | chr8.3:79433453-79433472 | MS.gene39661:intron | 20.0% |
| !! | TGAATGAACAAAATTAAAGA+TGG | + | chr8.3:79431686-79431705 | MS.gene39661:intron | 20.0% |
| !! | TTTACGATACTTATAAGATA+AGG | - | chr8.3:79433804-79433823 | None:intergenic | 20.0% |
| !! | TTTATTTGAATTTGCAGATA+TGG | + | chr8.3:79436447-79436466 | MS.gene39661:intron | 20.0% |
| !!! | AAAAATAACACTAATGCTTT+TGG | + | chr8.3:79436392-79436411 | MS.gene39661:intron | 20.0% |
| !!! | AAAACTTGATTTTCTTCTTT+TGG | - | chr8.3:79435997-79436016 | None:intergenic | 20.0% |
| !!! | AAAGTTAAGGTTTTAAGTTT+AGG | + | chr8.3:79435178-79435197 | MS.gene39661:CDS | 20.0% |
| !!! | AAGAGTACTTTTTTTATGTT+AGG | + | chr8.3:79434488-79434507 | MS.gene39661:intron | 20.0% |
| !!! | AGGTCTTTTTTTTTTTTTTG+TGG | - | chr8.3:79435410-79435429 | None:intergenic | 20.0% |
| !!! | ATCTTTTAAGTCACAAAATT+TGG | + | chr8.3:79435677-79435696 | MS.gene39661:intron | 20.0% |
| !!! | ATTTTAAATTTTGTTGGTAG+TGG | - | chr8.3:79431493-79431512 | None:intergenic | 20.0% |
| !!! | CATCTTTATTTCCATATTAT+TGG | - | chr8.3:79431397-79431416 | None:intergenic | 20.0% |
| !!! | CATTGATTTCATGAATAATT+TGG | + | chr8.3:79432384-79432403 | MS.gene39661:CDS | 20.0% |
| !!! | GTGTGAATTTTAAATTTTGT+TGG | - | chr8.3:79431499-79431518 | None:intergenic | 20.0% |
| !!! | TACTATGACTTTATTTCATA+GGG | - | chr8.3:79433517-79433536 | None:intergenic | 20.0% |
| !!! | TATATATATTTGTTACAGAG+TGG | - | chr8.3:79434292-79434311 | None:intergenic | 20.0% |
| !!! | TCTTTTTTTTTTTTTTGTGG+TGG | - | chr8.3:79435407-79435426 | None:intergenic | 20.0% |
| !!! | TGATATTTTATATTGGTCAA+TGG | + | chr8.3:79431136-79431155 | MS.gene39661:CDS | 20.0% |
| !!! | TTGGTCACTTAATTTAATTT+TGG | + | chr8.3:79435523-79435542 | MS.gene39661:intron | 20.0% |
| !!! | TTTAAAGTTTGCATCAATAA+TGG | + | chr8.3:79433602-79433621 | MS.gene39661:intron | 20.0% |
| ! | AAAGGTTGTTTATATAGCAA+TGG | + | chr8.3:79432829-79432848 | MS.gene39661:intron | 25.0% |
| ! | AACAATCTTCATCTTAAGTT+GGG | - | chr8.3:79435932-79435951 | None:intergenic | 25.0% |
| ! | AATTCATTGAAGAAAGAAGA+AGG | + | chr8.3:79434755-79434774 | MS.gene39661:CDS | 25.0% |
| ! | ACACTAAGTAATCGTAAATA+AGG | - | chr8.3:79430767-79430786 | None:intergenic | 25.0% |
| ! | AGTTAATGCTTTATGTGAAA+GGG | + | chr8.3:79436053-79436072 | MS.gene39661:CDS | 25.0% |
| ! | ATAGATGTAGCAATATAATG+GGG | + | chr8.3:79431828-79431847 | MS.gene39661:intron | 25.0% |
| ! | ATATAAACCAAAGCTATGTT+TGG | - | chr8.3:79430923-79430942 | None:intergenic | 25.0% |
| ! | ATATATGTTCAATGAATGCA+GGG | + | chr8.3:79435862-79435881 | MS.gene39661:intron | 25.0% |
| ! | ATATGGAAATAAAGATGAGT+AGG | + | chr8.3:79431400-79431419 | MS.gene39661:intron | 25.0% |
| ! | ATCCAACAGATTAATTATGA+AGG | + | chr8.3:79433554-79433573 | MS.gene39661:intron | 25.0% |
| ! | ATCCATATATCAACTAAGAT+TGG | + | chr8.3:79434820-79434839 | MS.gene39661:CDS | 25.0% |
| ! | ATGAACCAAAAATTCGATAA+AGG | - | chr8.3:79432510-79432529 | None:intergenic | 25.0% |
| ! | ATGGACATATTAACAATCTA+GGG | - | chr8.3:79432067-79432086 | None:intergenic | 25.0% |
| ! | ATGGTGAACTATACATTAAA+AGG | + | chr8.3:79435902-79435921 | MS.gene39661:CDS | 25.0% |
| ! | ATTGTTCATAAAAATCAGCA+TGG | + | chr8.3:79431467-79431486 | MS.gene39661:intron | 25.0% |
| ! | CCAATTTATGATTACATCTA+TGG | + | chr8.3:79434698-79434717 | MS.gene39661:CDS | 25.0% |
| ! | CCATAGATGTAATCATAAAT+TGG | - | chr8.3:79434701-79434720 | None:intergenic | 25.0% |
| ! | CTAAATATATGATATGTGAC+AGG | + | chr8.3:79434624-79434643 | MS.gene39661:intron | 25.0% |
| ! | CTTATAAAACCATTTGTAAG+GGG | - | chr8.3:79433963-79433982 | None:intergenic | 25.0% |
| ! | GACACAAAAAATAAACTCAA+GGG | - | chr8.3:79435561-79435580 | None:intergenic | 25.0% |
| ! | GGAGGAGAATAAAAATTATT+GGG | + | chr8.3:79431849-79431868 | MS.gene39661:intron | 25.0% |
| ! | TACCTTCATAATTAATCTGT+TGG | - | chr8.3:79433559-79433578 | None:intergenic | 25.0% |
| ! | TAGTTAATGCTTTATGTGAA+AGG | + | chr8.3:79436052-79436071 | MS.gene39661:CDS | 25.0% |
| ! | TCCATATATCAACTAAGATT+GGG | + | chr8.3:79434821-79434840 | MS.gene39661:CDS | 25.0% |
| ! | TGACACAAAAAATAAACTCA+AGG | - | chr8.3:79435562-79435581 | None:intergenic | 25.0% |
| ! | TTACTCTCTTAGAAATCAAA+AGG | + | chr8.3:79436667-79436686 | MS.gene39661:intron | 25.0% |
| ! | TTCATGAAATTAAAGTCACA+TGG | - | chr8.3:79432086-79432105 | None:intergenic | 25.0% |
| ! | TTTATTTCCATATTATTGGG+AGG | - | chr8.3:79431393-79431412 | None:intergenic | 25.0% |
| !! | AATAAAAACCACTTGATAGT+TGG | - | chr8.3:79431776-79431795 | None:intergenic | 25.0% |
| !! | ATTTTTGTCATGAGTTAAGT+TGG | + | chr8.3:79433324-79433343 | MS.gene39661:intron | 25.0% |
| !! | CAATCTTTTCGAAATTTCTT+TGG | - | chr8.3:79436554-79436573 | None:intergenic | 25.0% |
| !! | GAAAATCAAGTTTTTCTTTG+TGG | + | chr8.3:79436003-79436022 | MS.gene39661:CDS | 25.0% |
| !! | GTACTATGACTTTATTTCAT+AGG | - | chr8.3:79433518-79433537 | None:intergenic | 25.0% |
| !! | GTTTGAGGAAAATTTTATAG+TGG | - | chr8.3:79433195-79433214 | None:intergenic | 25.0% |
| !! | TAACACCTTTATCGAATTTT+TGG | + | chr8.3:79432502-79432521 | MS.gene39661:intron | 25.0% |
| !! | TAAGTATCGTAAATATGAGT+TGG | + | chr8.3:79433811-79433830 | MS.gene39661:intron | 25.0% |
| !! | TATACAATCATTTGTTACCA+CGG | + | chr8.3:79433099-79433118 | MS.gene39661:intron | 25.0% |
| !! | TTCACATAAAGCATTAACTA+TGG | - | chr8.3:79436052-79436071 | None:intergenic | 25.0% |
| !! | TTTTGTATATGCAACAGAAT+TGG | + | chr8.3:79437050-79437069 | MS.gene39661:intron | 25.0% |
| !! | TTTTTGTCATGAGTTAAGTT+GGG | + | chr8.3:79433325-79433344 | MS.gene39661:intron | 25.0% |
| !!! | ATAAAAGGGTGTTTAGATAT+AGG | + | chr8.3:79433705-79433724 | MS.gene39661:intron | 25.0% |
| !!! | TAAAAGGGTGTTTAGATATA+GGG | + | chr8.3:79433706-79433725 | MS.gene39661:intron | 25.0% |
| !!! | TGTTTAGCATTGACAAAATA+TGG | + | chr8.3:79437161-79437180 | MS.gene39661:CDS | 25.0% |
| !!! | TTTTTTTCCTTCTTTCTTTC+AGG | + | chr8.3:79436201-79436220 | MS.gene39661:intron | 25.0% |
| AAACATGTACATGAACTAGA+TGG | + | chr8.3:79431618-79431637 | MS.gene39661:intron | 30.0% | |
| AAGATGCTTACATATAAGGA+CGG | - | chr8.3:79433672-79433691 | None:intergenic | 30.0% | |
| AATGGCAAATAGCAAAAAGT+AGG | - | chr8.3:79432299-79432318 | None:intergenic | 30.0% | |
| ACACTTAGTCCTTCAAATAA+GGG | + | chr8.3:79435700-79435719 | MS.gene39661:intron | 30.0% | |
| ACATTATCCAAACATAGCTT+TGG | + | chr8.3:79430913-79430932 | MS.gene39661:intron | 30.0% | |
| ACGATGCATAAAATATGCAA+AGG | + | chr8.3:79435366-79435385 | MS.gene39661:intron | 30.0% | |
| ACTCATAATGCTAGACAATT+TGG | + | chr8.3:79435595-79435614 | MS.gene39661:intron | 30.0% | |
| AGTGGACATTGGATAAATTA+GGG | - | chr8.3:79436610-79436629 | None:intergenic | 30.0% | |
| ATACTTAAGGATTGGAAAGA+TGG | - | chr8.3:79432449-79432468 | None:intergenic | 30.0% | |
| ATATGCTCAATTTGCAATCA+TGG | + | chr8.3:79434975-79434994 | MS.gene39661:CDS | 30.0% | |
| ATCATTGTCTTGATCATAGT+CGG | + | chr8.3:79436776-79436795 | MS.gene39661:intron | 30.0% | |
| ATGACAATTCTTCTACATAG+TGG | + | chr8.3:79431210-79431229 | MS.gene39661:CDS | 30.0% | |
| CAACAATCTTCATCTTAAGT+TGG | - | chr8.3:79435933-79435952 | None:intergenic | 30.0% | |
| CACTACATCATACACAATTT+CGG | + | chr8.3:79434654-79434673 | MS.gene39661:CDS | 30.0% | |
| CATATATGTTCAATGAATGC+AGG | + | chr8.3:79435861-79435880 | MS.gene39661:intron | 30.0% | |
| CATGGACATATTAACAATCT+AGG | - | chr8.3:79432068-79432087 | None:intergenic | 30.0% | |
| CTTAAGATGAAGATTGTTGA+TGG | + | chr8.3:79435934-79435953 | MS.gene39661:CDS | 30.0% | |
| GAATAAAAATTATTGGGCTG+AGG | + | chr8.3:79431855-79431874 | MS.gene39661:intron | 30.0% | |
| GAGATAAAGAGATCCAAATT+TGG | - | chr8.3:79430578-79430597 | None:intergenic | 30.0% | |
| GCTCATGTATAAAATGTTTG+AGG | - | chr8.3:79433210-79433229 | None:intergenic | 30.0% | |
| GGGAGGAGAATAAAAATTAT+TGG | + | chr8.3:79431848-79431867 | MS.gene39661:intron | 30.0% | |
| GTAACTCCTTATATCTAGTT+GGG | - | chr8.3:79433646-79433665 | None:intergenic | 30.0% | |
| GTGACTTTAAATGTGAGTTT+GGG | - | chr8.3:79430814-79430833 | None:intergenic | 30.0% | |
| GTGTATACATGGTATACTTA+AGG | - | chr8.3:79432462-79432481 | None:intergenic | 30.0% | |
| GTTAATGCTTTATGTGAAAG+GGG | + | chr8.3:79436054-79436073 | MS.gene39661:CDS | 30.0% | |
| TAACTCCTTATATCTAGTTG+GGG | - | chr8.3:79433645-79433664 | None:intergenic | 30.0% | |
| TACATGGTATACTTAAGGAT+TGG | - | chr8.3:79432457-79432476 | None:intergenic | 30.0% | |
| TATGCTCAATTTGCAATCAT+GGG | + | chr8.3:79434976-79434995 | MS.gene39661:CDS | 30.0% | |
| TGTCTAGCATTATGAGTTAA+GGG | - | chr8.3:79435592-79435611 | None:intergenic | 30.0% | |
| TTCAAATGCTCCCATTTAAA+AGG | - | chr8.3:79432648-79432667 | None:intergenic | 30.0% | |
| TTGTCTAGCATTATGAGTTA+AGG | - | chr8.3:79435593-79435612 | None:intergenic | 30.0% | |
| ! | AAATTTCTTTGGAGGGAATT+GGG | - | chr8.3:79436543-79436562 | None:intergenic | 30.0% |
| ! | ACAATCTTCATCTTAAGTTG+GGG | - | chr8.3:79435931-79435950 | None:intergenic | 30.0% |
| ! | ATCGAAATATGATGGAATGT+CGG | + | chr8.3:79432565-79432584 | MS.gene39661:intron | 30.0% |
| ! | ATTTTATATTGGTCAATGGC+TGG | + | chr8.3:79431140-79431159 | MS.gene39661:CDS | 30.0% |
| ! | CTTAGTTGATATATGGATTC+AGG | - | chr8.3:79434818-79434837 | None:intergenic | 30.0% |
| ! | CTTTTCGAAATTTCTTTGGA+GGG | - | chr8.3:79436550-79436569 | None:intergenic | 30.0% |
| ! | GAGAATGATATCTAGAGTAA+AGG | - | chr8.3:79431287-79431306 | None:intergenic | 30.0% |
| ! | GTAATTGCTGTTGTGTATAA+TGG | - | chr8.3:79432322-79432341 | None:intergenic | 30.0% |
| ! | GTTTGGATAATGTTTTTCCA+GGG | - | chr8.3:79430906-79430925 | None:intergenic | 30.0% |
| ! | TATTTCGATCCCTTATTTGA+AGG | - | chr8.3:79435712-79435731 | None:intergenic | 30.0% |
| ! | TCCCAATCTTAGTTGATATA+TGG | - | chr8.3:79434825-79434844 | None:intergenic | 30.0% |
| ! | TCTAAACACCCTTTTATTAG+AGG | - | chr8.3:79433702-79433721 | None:intergenic | 30.0% |
| ! | TCTTTTCGAAATTTCTTTGG+AGG | - | chr8.3:79436551-79436570 | None:intergenic | 30.0% |
| ! | TGATTTCTAAGAGAGTAAAC+TGG | - | chr8.3:79436665-79436684 | None:intergenic | 30.0% |
| ! | TGTTTGGATAATGTTTTTCC+AGG | - | chr8.3:79430907-79430926 | None:intergenic | 30.0% |
| !! | TCTAGTTCATGTACATGTTT+TGG | - | chr8.3:79431618-79431637 | None:intergenic | 30.0% |
| !! | TGTTTTTGTTACTGTAGTCA+TGG | - | chr8.3:79436863-79436882 | None:intergenic | 30.0% |
| AAAAAACAGAATCGTCGACA+AGG | + | chr8.3:79430617-79430636 | MS.gene39661:CDS | 35.0% | |
| AAGATGGAGAAGACTTTCTT+AGG | - | chr8.3:79432433-79432452 | None:intergenic | 35.0% | |
| AAGTTTAGGTCTTTCAAACC+AGG | + | chr8.3:79435192-79435211 | MS.gene39661:CDS | 35.0% | |
| AATGGTACCTCTATTTCATG+TGG | + | chr8.3:79434879-79434898 | MS.gene39661:CDS | 35.0% | |
| AATTTGCAGATATGGCTAGT+TGG | + | chr8.3:79436455-79436474 | MS.gene39661:intron | 35.0% | |
| ACCTATTACCAACTATCAAG+TGG | + | chr8.3:79431765-79431784 | MS.gene39661:intron | 35.0% | |
| ACGATTACTTAGTGTCTGTT+TGG | + | chr8.3:79430772-79430791 | MS.gene39661:intron | 35.0% | |
| AGGATAAACTCACAAGTGAT+TGG | - | chr8.3:79431336-79431355 | None:intergenic | 35.0% | |
| AGGGGATGATTAATCTTCAA+AGG | - | chr8.3:79437214-79437233 | None:intergenic | 35.0% | |
| AGTCTCAAAAATTGCCCATA+TGG | + | chr8.3:79431169-79431188 | MS.gene39661:CDS | 35.0% | |
| ATAAAATATGCAAAGGTCCG+GGG | + | chr8.3:79435373-79435392 | MS.gene39661:intron | 35.0% | |
| ATAAAATTAGAGGACTCACC+TGG | - | chr8.3:79435213-79435232 | None:intergenic | 35.0% | |
| ATAACCAGCAAATGATGCTA+TGG | - | chr8.3:79432356-79432375 | None:intergenic | 35.0% | |
| ATACATTAAGTTAGGCAGCT+TGG | + | chr8.3:79433461-79433480 | MS.gene39661:intron | 35.0% | |
| ATATGGATTCAGGAGTAGTA+AGG | - | chr8.3:79434808-79434827 | None:intergenic | 35.0% | |
| ATTGTGTATGATGTAGTGAG+TGG | - | chr8.3:79434652-79434671 | None:intergenic | 35.0% | |
| ATTTCCATATTATTGGGAGG+TGG | - | chr8.3:79431390-79431409 | None:intergenic | 35.0% | |
| CAATAGTAAAGAAACTCCAC+TGG | - | chr8.3:79431237-79431256 | None:intergenic | 35.0% | |
| CAGTGGAGTTTCTTTACTAT+TGG | + | chr8.3:79431235-79431254 | MS.gene39661:CDS | 35.0% | |
| CATAAAATATGCAAAGGTCC+GGG | + | chr8.3:79435372-79435391 | MS.gene39661:intron | 35.0% | |
| CCTCAAAACTTACTTGAACA+TGG | - | chr8.3:79435015-79435034 | None:intergenic | 35.0% | |
| CGTGACTTTAAATGTGAGTT+TGG | - | chr8.3:79430815-79430834 | None:intergenic | 35.0% | |
| GACACTTAGTCCTTCAAATA+AGG | + | chr8.3:79435699-79435718 | MS.gene39661:intron | 35.0% | |
| GACATTATTCCCCTTACAAA+TGG | + | chr8.3:79433951-79433970 | MS.gene39661:intron | 35.0% | |
| GAGTAGGTGAGAAATTAATG+TGG | + | chr8.3:79431416-79431435 | MS.gene39661:intron | 35.0% | |
| GAGTGGACATTGGATAAATT+AGG | - | chr8.3:79436611-79436630 | None:intergenic | 35.0% | |
| GCATAAAATATGCAAAGGTC+CGG | + | chr8.3:79435371-79435390 | MS.gene39661:intron | 35.0% | |
| GGTAACTCCTTATATCTAGT+TGG | - | chr8.3:79433647-79433666 | None:intergenic | 35.0% | |
| GTGGACATTGGATAAATTAG+GGG | - | chr8.3:79436609-79436628 | None:intergenic | 35.0% | |
| GTGTTTAGATATAGGGATGA+AGG | + | chr8.3:79433713-79433732 | MS.gene39661:intron | 35.0% | |
| GTTGTAACCTGAAAGAAAGA+AGG | - | chr8.3:79436211-79436230 | None:intergenic | 35.0% | |
| TAAATTAGGGGGAGTTATCA+TGG | - | chr8.3:79436597-79436616 | None:intergenic | 35.0% | |
| TAAGAGTTGGATACTTACGA+TGG | - | chr8.3:79432484-79432503 | None:intergenic | 35.0% | |
| TACTTACGATGGTGTATACA+TGG | - | chr8.3:79432473-79432492 | None:intergenic | 35.0% | |
| TCTTTGTGGTAAACTTGACA+AGG | + | chr8.3:79436017-79436036 | MS.gene39661:CDS | 35.0% | |
| TGAGGAGGTAGAACAAAAAA+AGG | + | chr8.3:79436487-79436506 | MS.gene39661:CDS | 35.0% | |
| TGGACATTGGATAAATTAGG+GGG | - | chr8.3:79436608-79436627 | None:intergenic | 35.0% | |
| TGGGAAAACCAAATTCTTCT+GGG | - | chr8.3:79436284-79436303 | None:intergenic | 35.0% | |
| TTCCATCGAATTTCATCTGT+AGG | - | chr8.3:79435443-79435462 | None:intergenic | 35.0% | |
| TTTACCACCTCCCAATAATA+TGG | + | chr8.3:79431383-79431402 | MS.gene39661:intron | 35.0% | |
| TTTCATTGTGAATAGTCCAG+AGG | + | chr8.3:79430494-79430513 | MS.gene39661:CDS | 35.0% | |
| ! | AAGTTGATCGAGAAAGCAAT+TGG | + | chr8.3:79430655-79430674 | MS.gene39661:CDS | 35.0% |
| ! | CCATGTTCAAGTAAGTTTTG+AGG | + | chr8.3:79435012-79435031 | MS.gene39661:intron | 35.0% |
| ! | CTTCATGCTTTTAGTAGTGA+AGG | + | chr8.3:79430860-79430879 | MS.gene39661:intron | 35.0% |
| ! | GAAATTTCTTTGGAGGGAAT+TGG | - | chr8.3:79436544-79436563 | None:intergenic | 35.0% |
| ! | TAATTATAAAGCATTCGCCG+TGG | - | chr8.3:79433119-79433138 | None:intergenic | 35.0% |
| ! | TGCTGTTGTGTATAATGGAA+TGG | - | chr8.3:79432317-79432336 | None:intergenic | 35.0% |
| !! | ACCACTTGATAGTTGGTAAT+AGG | - | chr8.3:79431769-79431788 | None:intergenic | 35.0% |
| !! | AGTGATTGGTTCTGTAACAA+TGG | - | chr8.3:79431322-79431341 | None:intergenic | 35.0% |
| !! | GAACAAAAAAAGGCACCAAA+AGG | + | chr8.3:79436497-79436516 | MS.gene39661:CDS | 35.0% |
| !! | TCGATAAAGGTGTTAAGAGT+TGG | - | chr8.3:79432497-79432516 | None:intergenic | 35.0% |
| !! | TTTATGTGAAAGGGGTACTA+AGG | + | chr8.3:79436062-79436081 | MS.gene39661:CDS | 35.0% |
| !!! | CATCTGTAGGTCTTTTTTGT+AGG | - | chr8.3:79435430-79435449 | None:intergenic | 35.0% |
| !!! | GACGATTCTGTTTTTTCCTT+TGG | - | chr8.3:79430613-79430632 | None:intergenic | 35.0% |
| !!! | GATTCTGTTTTTTCCTTTGG+CGG | - | chr8.3:79430610-79430629 | None:intergenic | 35.0% |
| !!! | GTTCTTGTCACTTGGTTTTA+TGG | + | chr8.3:79434920-79434939 | MS.gene39661:CDS | 35.0% |
| ACCTTTGCAGAATTTGATCC+TGG | - | chr8.3:79436304-79436323 | None:intergenic | 40.0% | |
| AGAACAGACCAAAAGGTGAA+TGG | - | chr8.3:79434905-79434924 | None:intergenic | 40.0% | |
| AGACACGCTTCGAATAAGAT+TGG | + | chr8.3:79432881-79432900 | MS.gene39661:intron | 40.0% | |
| AGCAGAGTTGAGCAAAGTTA+AGG | + | chr8.3:79435165-79435184 | MS.gene39661:CDS | 40.0% | |
| AGCATCCTCACCATCATATA+TGG | - | chr8.3:79430549-79430568 | None:intergenic | 40.0% | |
| AGGTACCATTCAGAAGATTG+AGG | - | chr8.3:79434869-79434888 | None:intergenic | 40.0% | |
| AGTAACACAGCTAAAACTCG+CGG | + | chr8.3:79432766-79432785 | MS.gene39661:intron | 40.0% | |
| AGTGACAAGAACAGACCAAA+AGG | - | chr8.3:79434912-79434931 | None:intergenic | 40.0% | |
| ATCTACTAACCTCACAAGAG+TGG | - | chr8.3:79436628-79436647 | None:intergenic | 40.0% | |
| CCATCATATATGGGAAGATG+AGG | - | chr8.3:79430539-79430558 | None:intergenic | 40.0% | |
| CCTCATCTTCCCATATATGA+TGG | + | chr8.3:79430536-79430555 | MS.gene39661:CDS | 40.0% | |
| CCTTTGCAGAATTTGATCCT+GGG | - | chr8.3:79436303-79436322 | None:intergenic | 40.0% | |
| CTGGGAAAACCAAATTCTTC+TGG | - | chr8.3:79436285-79436304 | None:intergenic | 40.0% | |
| CTTACTTGAACATGGAACCT+TGG | - | chr8.3:79435007-79435026 | None:intergenic | 40.0% | |
| GACCTACAGATGAAATTCGA+TGG | + | chr8.3:79435438-79435457 | MS.gene39661:intron | 40.0% | |
| GCATCCTCACCATCATATAT+GGG | - | chr8.3:79430548-79430567 | None:intergenic | 40.0% | |
| GGATGCTACATGACCAAATT+TGG | + | chr8.3:79430562-79430581 | MS.gene39661:CDS | 40.0% | |
| TAGCGGAAGTCATCTCATTA+AGG | + | chr8.3:79432950-79432969 | MS.gene39661:intron | 40.0% | |
| TAGGCTATGTGTTCTGCAAA+TGG | - | chr8.3:79432280-79432299 | None:intergenic | 40.0% | |
| TATCTAGTTGGGGAACGATT+TGG | - | chr8.3:79433635-79433654 | None:intergenic | 40.0% | |
| TCGTTCCCCAACTAGATATA+AGG | + | chr8.3:79433637-79433656 | MS.gene39661:intron | 40.0% | |
| TGAATGGCCACATGAAATAG+AGG | - | chr8.3:79434889-79434908 | None:intergenic | 40.0% | |
| TGCATCAAATCTAGTCGTGT+TGG | + | chr8.3:79433894-79433913 | MS.gene39661:intron | 40.0% | |
| TGCTTACATATAAGGACGGA+TGG | - | chr8.3:79433668-79433687 | None:intergenic | 40.0% | |
| TGTGAATAGTCCAGAGGAAA+AGG | + | chr8.3:79430500-79430519 | MS.gene39661:CDS | 40.0% | |
| TTTGGAGGGAATTGGGAAAA+TGG | - | chr8.3:79436536-79436555 | None:intergenic | 40.0% | |
| TTTGGTCTGTTCTTGTCACT+TGG | + | chr8.3:79434912-79434931 | MS.gene39661:CDS | 40.0% | |
| ! | AACCTAGAGTACTTTGGTAG+TGG | + | chr8.3:79433490-79433509 | MS.gene39661:intron | 40.0% |
| ! | ACACCACTAGTTCTCCATAT+GGG | - | chr8.3:79431186-79431205 | None:intergenic | 40.0% |
| ! | ACTACCAAAGTACTCTAGGT+TGG | - | chr8.3:79433491-79433510 | None:intergenic | 40.0% |
| ! | AGATAAGGAGTGCATCTCTT+AGG | - | chr8.3:79433789-79433808 | None:intergenic | 40.0% |
| ! | GATGTAGCAATATAATGGGG+AGG | + | chr8.3:79431831-79431850 | MS.gene39661:intron | 40.0% |
| ! | GGAGACTTGCTCAATAGATA+TGG | + | chr8.3:79435883-79435902 | MS.gene39661:CDS | 40.0% |
| ! | GGTACGAACAATGATCCTTT+TGG | - | chr8.3:79436515-79436534 | None:intergenic | 40.0% |
| ! | TCTTCCCATATATGATGGTG+AGG | + | chr8.3:79430541-79430560 | MS.gene39661:CDS | 40.0% |
| ! | TGAGCTTAGTTCAGTTGGTA+GGG | + | chr8.3:79435343-79435362 | MS.gene39661:intron | 40.0% |
| ! | TGCAATCATGGGTTATTCCA+AGG | + | chr8.3:79434987-79435006 | MS.gene39661:CDS | 40.0% |
| ! | TGTGTGCTCTTTGCTATGAA+TGG | - | chr8.3:79430471-79430490 | None:intergenic | 40.0% |
| !!! | ATGGGCAATTTTTGAGACTC+TGG | - | chr8.3:79431168-79431187 | None:intergenic | 40.0% |
| !!! | CAGAAGAATTTGGTTTTCCC+AGG | + | chr8.3:79436283-79436302 | MS.gene39661:CDS | 40.0% |
| AACCTCACAAGAGTGGACAT+TGG | - | chr8.3:79436621-79436640 | None:intergenic | 45.0% | |
| AGTCGTGAGTCGTGACATTA+AGG | - | chr8.3:79436892-79436911 | None:intergenic | 45.0% | |
| AGTTGGAGATCAATGTGAGG+AGG | + | chr8.3:79436472-79436491 | MS.gene39661:CDS | 45.0% | |
| ATCCAATGTCCACTCTTGTG+AGG | + | chr8.3:79436616-79436635 | MS.gene39661:CDS | 45.0% | |
| ATGAACGTCCCAACCTTCTA+AGG | - | chr8.3:79437125-79437144 | None:intergenic | 45.0% | |
| ATGCCGTGGTTCAAGAGAAA+TGG | - | chr8.3:79432978-79432997 | None:intergenic | 45.0% | |
| ATTGAGATGCGATATTGCCC+TGG | + | chr8.3:79430886-79430905 | MS.gene39661:intron | 45.0% | |
| ATTGCACGCCTTAGAAGGTT+GGG | + | chr8.3:79437114-79437133 | MS.gene39661:CDS | 45.0% | |
| CAAGAAGAGTCATGAGTGCA+TGG | + | chr8.3:79437077-79437096 | MS.gene39661:CDS | 45.0% | |
| CATATGGAGAACTAGTGGTG+TGG | + | chr8.3:79431185-79431204 | MS.gene39661:CDS | 45.0% | |
| CATGCACTCATGACTCTTCT+TGG | - | chr8.3:79437079-79437098 | None:intergenic | 45.0% | |
| CCATTCAGAAGATTGAGGTG+AGG | - | chr8.3:79434864-79434883 | None:intergenic | 45.0% | |
| CCCAGGATCAAATTCTGCAA+AGG | + | chr8.3:79436300-79436319 | MS.gene39661:CDS | 45.0% | |
| CCTCACCTCAATCTTCTGAA+TGG | + | chr8.3:79434861-79434880 | MS.gene39661:CDS | 45.0% | |
| CTCGAAGTCCCAGAAGAATT+TGG | + | chr8.3:79436273-79436292 | MS.gene39661:CDS | 45.0% | |
| GCATCCATAGCATCATTTGC+TGG | + | chr8.3:79432349-79432368 | MS.gene39661:CDS | 45.0% | |
| GCTAGTTGGAGATCAATGTG+AGG | + | chr8.3:79436469-79436488 | MS.gene39661:CDS | 45.0% | |
| GGAAGATGAGGAAGTTACTG+AGG | - | chr8.3:79430527-79430546 | None:intergenic | 45.0% | |
| GGAATATTGCACGCCTTAGA+AGG | + | chr8.3:79437109-79437128 | MS.gene39661:CDS | 45.0% | |
| GTCCCATTTCTCTTGAACCA+CGG | + | chr8.3:79432972-79432991 | MS.gene39661:intron | 45.0% | |
| GTGAGCTTAGTTCAGTTGGT+AGG | + | chr8.3:79435342-79435361 | MS.gene39661:intron | 45.0% | |
| TATTGCACGCCTTAGAAGGT+TGG | + | chr8.3:79437113-79437132 | MS.gene39661:CDS | 45.0% | |
| TGCCGTGGTTCAAGAGAAAT+GGG | - | chr8.3:79432977-79432996 | None:intergenic | 45.0% | |
| TGTGTCAAATGCACCACATC+TGG | - | chr8.3:79434785-79434804 | None:intergenic | 45.0% | |
| TTCAGAAGATTGAGGTGAGG+AGG | - | chr8.3:79434861-79434880 | None:intergenic | 45.0% | |
| TTGCCCATATGGAGAACTAG+TGG | + | chr8.3:79431180-79431199 | MS.gene39661:CDS | 45.0% | |
| ! | ATCTAGTCGTGTTGGTCATG+AGG | + | chr8.3:79433902-79433921 | MS.gene39661:intron | 45.0% |
| ! | CACACCACTAGTTCTCCATA+TGG | - | chr8.3:79431187-79431206 | None:intergenic | 45.0% |
| ! | GACCACTACCAAAGTACTCT+AGG | - | chr8.3:79433495-79433514 | None:intergenic | 45.0% |
| ! | TCATGTGGCCATTCACCTTT+TGG | + | chr8.3:79434894-79434913 | MS.gene39661:CDS | 45.0% |
| ! | TCTAGTCGTGTTGGTCATGA+GGG | + | chr8.3:79433903-79433922 | MS.gene39661:intron | 45.0% |
| ! | TTACTGAGGTCCTTTTCCTC+TGG | - | chr8.3:79430513-79430532 | None:intergenic | 45.0% |
| ! | TTTTTCCTTTGGCGGTTCGA+TGG | - | chr8.3:79430602-79430621 | None:intergenic | 45.0% |
| !! | CAAATTCTTCTGGGACTTCG+AGG | - | chr8.3:79436275-79436294 | None:intergenic | 45.0% |
| !! | GATTGTTGATGGCAGTAGCT+TGG | + | chr8.3:79435945-79435964 | MS.gene39661:CDS | 45.0% |
| !! | GTGAAAGGGGTACTAAGGTA+TGG | + | chr8.3:79436067-79436086 | MS.gene39661:intron | 45.0% |
| !! | TCTTCTACATAGTGGACCAG+TGG | + | chr8.3:79431218-79431237 | MS.gene39661:CDS | 45.0% |
| !! | AAAATATTATAACATTTAAA+TGG | - | chr8.3:79435296-79435315 | None:intergenic | 5.0% |
| !! | AATAAGATAAAAATTTAATT+CGG | + | chr8.3:79433138-79433157 | MS.gene39661:intron | 5.0% |
| !! | TAAAATAAAAAACAAAAAAT+AGG | - | chr8.3:79431356-79431375 | None:intergenic | 5.0% |
| !! | TAAAATGTTAAATTAAATAA+AGG | - | chr8.3:79434424-79434443 | None:intergenic | 5.0% |
| !!! | AGTTTTTTTTTTTTTTTTTA+GGG | - | chr8.3:79431938-79431957 | None:intergenic | 5.0% |
| !!! | TAGTTTTTTTTTTTTTTTTT+AGG | - | chr8.3:79431939-79431958 | None:intergenic | 5.0% |
| AGATTGAGGTGAGGAGGCTA+AGG | - | chr8.3:79434855-79434874 | None:intergenic | 50.0% | |
| ATGAGTGCATGGCGTATTGC+TGG | + | chr8.3:79437088-79437107 | MS.gene39661:CDS | 50.0% | |
| CCAACTGAACTAAGCTCACG+AGG | - | chr8.3:79435341-79435360 | None:intergenic | 50.0% | |
| CCACGGCATACTCAATCACA+TGG | + | chr8.3:79432989-79433008 | MS.gene39661:intron | 50.0% | |
| CCATGTGATTGAGTATGCCG+TGG | - | chr8.3:79432992-79433011 | None:intergenic | 50.0% | |
| CCTCGTGAGCTTAGTTCAGT+TGG | + | chr8.3:79435338-79435357 | MS.gene39661:intron | 50.0% | |
| GGCAAGCAAGTCTTCAGCAT+GGG | + | chr8.3:79437182-79437201 | MS.gene39661:CDS | 50.0% | |
| GGTTGGGACGTTCATGAATG+TGG | + | chr8.3:79437130-79437149 | MS.gene39661:CDS | 50.0% | |
| TGGCAAGCAAGTCTTCAGCA+TGG | + | chr8.3:79437181-79437200 | MS.gene39661:CDS | 50.0% | |
| TTAGGGGGAGTTATCATGGC+TGG | - | chr8.3:79436593-79436612 | None:intergenic | 50.0% | |
| ! | AGAAGAAGGTGCACCAGATG+TGG | + | chr8.3:79434769-79434788 | MS.gene39661:CDS | 50.0% |
| ! | CCAAAGTACTCTAGGTTGGC+AGG | - | chr8.3:79433487-79433506 | None:intergenic | 50.0% |
| ! | CCTGCCAACCTAGAGTACTT+TGG | + | chr8.3:79433484-79433503 | MS.gene39661:intron | 50.0% |
| ! | TTGTGGTGGAGTTTGAACCC+CGG | - | chr8.3:79435393-79435412 | None:intergenic | 50.0% |
| AAGCTCACGAGGACGTCTGT+AGG | - | chr8.3:79435330-79435349 | None:intergenic | 55.0% | |
| TCTCGCCATCGAACCGCCAA+AGG | + | chr8.3:79430594-79430613 | MS.gene39661:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 79430453 | 79437240 | 79430453 | ID=MS.gene39661 |
| chr8.3 | mRNA | 79430453 | 79437240 | 79430453 | ID=MS.gene39661.t1;Parent=MS.gene39661 |
| chr8.3 | exon | 79430453 | 79430676 | 79430453 | ID=MS.gene39661.t1.exon1;Parent=MS.gene39661.t1 |
| chr8.3 | CDS | 79430453 | 79430676 | 79430453 | ID=cds.MS.gene39661.t1;Parent=MS.gene39661.t1 |
| chr8.3 | exon | 79431110 | 79431342 | 79431110 | ID=MS.gene39661.t1.exon2;Parent=MS.gene39661.t1 |
| chr8.3 | CDS | 79431110 | 79431342 | 79431110 | ID=cds.MS.gene39661.t1;Parent=MS.gene39661.t1 |
| chr8.3 | exon | 79432266 | 79432485 | 79432266 | ID=MS.gene39661.t1.exon3;Parent=MS.gene39661.t1 |
| chr8.3 | CDS | 79432266 | 79432485 | 79432266 | ID=cds.MS.gene39661.t1;Parent=MS.gene39661.t1 |
| chr8.3 | exon | 79434646 | 79435021 | 79434646 | ID=MS.gene39661.t1.exon4;Parent=MS.gene39661.t1 |
| chr8.3 | CDS | 79434646 | 79435021 | 79434646 | ID=cds.MS.gene39661.t1;Parent=MS.gene39661.t1 |
| chr8.3 | exon | 79435106 | 79435213 | 79435106 | ID=MS.gene39661.t1.exon5;Parent=MS.gene39661.t1 |
| chr8.3 | CDS | 79435106 | 79435213 | 79435106 | ID=cds.MS.gene39661.t1;Parent=MS.gene39661.t1 |
| chr8.3 | exon | 79435883 | 79436083 | 79435883 | ID=MS.gene39661.t1.exon6;Parent=MS.gene39661.t1 |
| chr8.3 | CDS | 79435883 | 79436083 | 79435883 | ID=cds.MS.gene39661.t1;Parent=MS.gene39661.t1 |
| chr8.3 | exon | 79436223 | 79436321 | 79436223 | ID=MS.gene39661.t1.exon7;Parent=MS.gene39661.t1 |
| chr8.3 | CDS | 79436223 | 79436321 | 79436223 | ID=cds.MS.gene39661.t1;Parent=MS.gene39661.t1 |
| chr8.3 | exon | 79436464 | 79436637 | 79436464 | ID=MS.gene39661.t1.exon8;Parent=MS.gene39661.t1 |
| chr8.3 | CDS | 79436464 | 79436637 | 79436464 | ID=cds.MS.gene39661.t1;Parent=MS.gene39661.t1 |
| chr8.3 | exon | 79437067 | 79437240 | 79437067 | ID=MS.gene39661.t1.exon9;Parent=MS.gene39661.t1 |
| chr8.3 | CDS | 79437067 | 79437240 | 79437067 | ID=cds.MS.gene39661.t1;Parent=MS.gene39661.t1 |
| Gene Sequence |
| Protein sequence |
