Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39903.t1 | XP_013468573.1 | 98.9 | 360 | 4 | 0 | 1 | 360 | 1 | 360 | 7.10E-170 | 606.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39903.t1 | O04336 | 60.2 | 384 | 117 | 12 | 1 | 356 | 1 | 376 | 4.8e-82 | 306.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39903.t1 | A0A072VWY9 | 98.9 | 360 | 4 | 0 | 1 | 360 | 1 | 360 | 5.1e-170 | 606.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene39903.t1 | TF | WRKY |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050352 | MS.gene39903 | 0.829399 | 5.26E-55 | -1.69E-46 |
| MS.gene051026 | MS.gene39903 | 0.803812 | 2.92E-49 | -1.69E-46 |
| MS.gene055634 | MS.gene39903 | -0.802676 | 5.01E-49 | -1.69E-46 |
| MS.gene056466 | MS.gene39903 | 0.809642 | 1.71E-50 | -1.69E-46 |
| MS.gene057684 | MS.gene39903 | -0.802282 | 6.04E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39903.t1 | MTR_1g070455 | 98.889 | 360 | 4 | 0 | 1 | 360 | 1 | 360 | 0.0 | 742 |
| MS.gene39903.t1 | MTR_1g009613 | 36.313 | 358 | 162 | 10 | 4 | 350 | 17 | 319 | 6.17e-58 | 191 |
| MS.gene39903.t1 | MTR_4g094908 | 56.044 | 182 | 58 | 4 | 183 | 351 | 152 | 324 | 2.45e-55 | 184 |
| MS.gene39903.t1 | MTR_5g016610 | 74.074 | 108 | 26 | 2 | 245 | 351 | 151 | 257 | 4.68e-53 | 176 |
| MS.gene39903.t1 | MTR_4g127040 | 63.768 | 138 | 39 | 4 | 218 | 352 | 175 | 304 | 1.15e-51 | 174 |
| MS.gene39903.t1 | MTR_3g108960 | 48.466 | 163 | 72 | 5 | 205 | 359 | 222 | 380 | 3.70e-40 | 146 |
| MS.gene39903.t1 | MTR_0117s0040 | 59.494 | 79 | 32 | 0 | 272 | 350 | 53 | 131 | 6.65e-30 | 115 |
| MS.gene39903.t1 | MTR_2g016770 | 55.682 | 88 | 38 | 1 | 268 | 354 | 9 | 96 | 2.12e-27 | 107 |
| MS.gene39903.t1 | MTR_2g016770 | 55.294 | 85 | 37 | 1 | 271 | 354 | 4 | 88 | 3.12e-26 | 104 |
| MS.gene39903.t1 | MTR_2g032030 | 52.475 | 101 | 42 | 3 | 261 | 356 | 230 | 329 | 6.41e-26 | 108 |
| MS.gene39903.t1 | MTR_2g032030 | 52.475 | 101 | 42 | 3 | 261 | 356 | 230 | 329 | 7.34e-26 | 107 |
| MS.gene39903.t1 | MTR_8g087000 | 52.222 | 90 | 36 | 1 | 269 | 351 | 45 | 134 | 8.83e-26 | 104 |
| MS.gene39903.t1 | MTR_2g083870 | 53.191 | 94 | 28 | 2 | 269 | 351 | 50 | 138 | 2.04e-25 | 103 |
| MS.gene39903.t1 | MTR_2g024350 | 61.972 | 71 | 26 | 1 | 290 | 360 | 5 | 74 | 2.31e-25 | 102 |
| MS.gene39903.t1 | MTR_8g087000 | 68.333 | 60 | 19 | 0 | 292 | 351 | 76 | 135 | 4.25e-25 | 102 |
| MS.gene39903.t1 | MTR_7g079040 | 57.831 | 83 | 30 | 1 | 268 | 350 | 134 | 211 | 5.45e-25 | 103 |
| MS.gene39903.t1 | MTR_2g024380 | 54.118 | 85 | 36 | 1 | 268 | 352 | 229 | 310 | 9.69e-25 | 105 |
| MS.gene39903.t1 | MTR_8g028565 | 57.831 | 83 | 30 | 2 | 268 | 350 | 135 | 212 | 3.95e-23 | 99.0 |
| MS.gene39903.t1 | MTR_7g109600 | 51.724 | 87 | 38 | 1 | 268 | 350 | 24 | 110 | 5.39e-23 | 97.1 |
| MS.gene39903.t1 | MTR_1g099600 | 66.102 | 59 | 20 | 0 | 294 | 352 | 186 | 244 | 3.67e-22 | 95.9 |
| MS.gene39903.t1 | MTR_8g098945 | 54.286 | 70 | 28 | 1 | 281 | 350 | 121 | 186 | 3.25e-19 | 86.7 |
| MS.gene39903.t1 | MTR_3g053330 | 51.389 | 72 | 35 | 0 | 289 | 360 | 247 | 318 | 3.55e-19 | 89.0 |
| MS.gene39903.t1 | MTR_3g056100 | 58.209 | 67 | 26 | 2 | 289 | 355 | 254 | 318 | 5.54e-19 | 88.2 |
| MS.gene39903.t1 | MTR_3g056100 | 58.209 | 67 | 26 | 2 | 289 | 355 | 267 | 331 | 5.58e-19 | 88.2 |
| MS.gene39903.t1 | MTR_5g094430 | 59.016 | 61 | 24 | 1 | 290 | 350 | 249 | 308 | 5.71e-19 | 88.2 |
| MS.gene39903.t1 | MTR_5g094430 | 59.016 | 61 | 24 | 1 | 290 | 350 | 227 | 286 | 5.84e-19 | 87.8 |
| MS.gene39903.t1 | MTR_3g056100 | 59.091 | 66 | 25 | 2 | 290 | 355 | 412 | 475 | 7.60e-19 | 88.2 |
| MS.gene39903.t1 | MTR_3g056100 | 58.209 | 67 | 26 | 2 | 289 | 355 | 398 | 462 | 8.19e-19 | 88.2 |
| MS.gene39903.t1 | MTR_5g094430 | 59.016 | 61 | 24 | 1 | 290 | 350 | 361 | 420 | 8.76e-19 | 87.8 |
| MS.gene39903.t1 | MTR_4g082580 | 46.591 | 88 | 45 | 2 | 273 | 360 | 258 | 343 | 9.04e-19 | 87.0 |
| MS.gene39903.t1 | MTR_8g067635 | 48.913 | 92 | 40 | 2 | 268 | 359 | 327 | 411 | 1.20e-18 | 87.4 |
| MS.gene39903.t1 | MTR_7g110720 | 44.565 | 92 | 43 | 1 | 269 | 360 | 200 | 283 | 1.22e-18 | 87.0 |
| MS.gene39903.t1 | MTR_7g109800 | 44.578 | 83 | 45 | 1 | 268 | 350 | 120 | 201 | 1.42e-18 | 85.5 |
| MS.gene39903.t1 | MTR_7g110720 | 44.565 | 92 | 43 | 1 | 269 | 360 | 173 | 256 | 1.45e-18 | 86.7 |
| MS.gene39903.t1 | MTR_5g042920 | 34.641 | 153 | 94 | 3 | 208 | 360 | 239 | 385 | 1.52e-18 | 86.7 |
| MS.gene39903.t1 | MTR_5g042920 | 53.968 | 63 | 26 | 3 | 289 | 350 | 146 | 206 | 1.73e-12 | 68.6 |
| MS.gene39903.t1 | MTR_1g013760 | 47.945 | 73 | 36 | 1 | 279 | 351 | 128 | 198 | 1.98e-18 | 84.7 |
| MS.gene39903.t1 | MTR_4g094412 | 57.895 | 57 | 24 | 0 | 294 | 350 | 235 | 291 | 2.20e-18 | 86.7 |
| MS.gene39903.t1 | MTR_4g094412 | 57.895 | 57 | 24 | 0 | 294 | 350 | 244 | 300 | 2.53e-18 | 86.3 |
| MS.gene39903.t1 | MTR_7g011820 | 63.158 | 57 | 20 | 1 | 294 | 350 | 411 | 466 | 3.03e-18 | 86.3 |
| MS.gene39903.t1 | MTR_7g011820 | 53.125 | 64 | 27 | 3 | 290 | 352 | 224 | 285 | 3.87e-13 | 70.9 |
| MS.gene39903.t1 | MTR_2g023930 | 47.436 | 78 | 41 | 0 | 277 | 354 | 289 | 366 | 3.47e-18 | 86.3 |
| MS.gene39903.t1 | MTR_7g062220 | 49.367 | 79 | 36 | 2 | 276 | 354 | 110 | 184 | 3.71e-18 | 84.3 |
| MS.gene39903.t1 | MTR_4g007060 | 43.478 | 92 | 48 | 2 | 267 | 354 | 98 | 189 | 4.32e-18 | 83.6 |
| MS.gene39903.t1 | MTR_3g106060 | 55.172 | 58 | 26 | 0 | 294 | 351 | 139 | 196 | 4.47e-18 | 84.0 |
| MS.gene39903.t1 | MTR_4g007060 | 43.478 | 92 | 48 | 2 | 267 | 354 | 132 | 223 | 6.00e-18 | 84.0 |
| MS.gene39903.t1 | MTR_4g013260 | 49.351 | 77 | 35 | 2 | 277 | 350 | 317 | 392 | 7.73e-18 | 85.1 |
| MS.gene39903.t1 | MTR_4g013260 | 50.847 | 59 | 28 | 1 | 294 | 352 | 185 | 242 | 3.76e-13 | 70.9 |
| MS.gene39903.t1 | MTR_2g088000 | 47.436 | 78 | 41 | 0 | 277 | 354 | 333 | 410 | 8.28e-18 | 85.1 |
| MS.gene39903.t1 | MTR_7g100510 | 57.895 | 57 | 23 | 1 | 294 | 350 | 362 | 417 | 8.74e-18 | 84.7 |
| MS.gene39903.t1 | MTR_7g100510 | 52.055 | 73 | 30 | 4 | 281 | 352 | 178 | 246 | 8.99e-15 | 75.5 |
| MS.gene39903.t1 | MTR_8g069935 | 57.627 | 59 | 25 | 0 | 294 | 352 | 332 | 390 | 1.12e-17 | 84.3 |
| MS.gene39903.t1 | MTR_7g071120 | 33.143 | 175 | 95 | 6 | 196 | 360 | 227 | 389 | 2.03e-17 | 83.6 |
| MS.gene39903.t1 | MTR_7g071120 | 52.542 | 59 | 26 | 2 | 294 | 352 | 167 | 223 | 6.48e-12 | 67.0 |
| MS.gene39903.t1 | MTR_4g049790 | 57.895 | 57 | 24 | 0 | 294 | 350 | 313 | 369 | 2.04e-17 | 84.0 |
| MS.gene39903.t1 | MTR_4g130900 | 57.895 | 57 | 23 | 1 | 294 | 350 | 360 | 415 | 2.20e-17 | 83.6 |
| MS.gene39903.t1 | MTR_5g074400 | 36.508 | 126 | 72 | 2 | 232 | 350 | 352 | 476 | 3.86e-17 | 83.2 |
| MS.gene39903.t1 | MTR_5g074400 | 52.542 | 59 | 26 | 2 | 294 | 352 | 244 | 300 | 1.64e-12 | 68.9 |
| MS.gene39903.t1 | MTR_3g031220 | 48.718 | 78 | 39 | 1 | 273 | 350 | 345 | 421 | 4.13e-17 | 82.8 |
| MS.gene39903.t1 | MTR_3g031220 | 54.237 | 59 | 25 | 2 | 294 | 352 | 199 | 255 | 4.07e-13 | 70.9 |
| MS.gene39903.t1 | MTR_7g080000 | 48.193 | 83 | 38 | 3 | 276 | 355 | 412 | 492 | 4.21e-17 | 83.2 |
| MS.gene39903.t1 | MTR_7g080000 | 54.237 | 59 | 25 | 2 | 294 | 352 | 235 | 291 | 1.37e-11 | 66.2 |
| MS.gene39903.t1 | MTR_3g104750 | 41.414 | 99 | 56 | 2 | 252 | 350 | 64 | 160 | 4.23e-17 | 78.2 |
| MS.gene39903.t1 | MTR_4g094588 | 54.839 | 62 | 26 | 2 | 294 | 355 | 179 | 238 | 4.57e-17 | 81.6 |
| MS.gene39903.t1 | MTR_7g009730 | 56.140 | 57 | 25 | 0 | 294 | 350 | 220 | 276 | 5.75e-17 | 82.4 |
| MS.gene39903.t1 | MTR_4g132430 | 52.459 | 61 | 29 | 0 | 294 | 354 | 128 | 188 | 6.63e-17 | 81.3 |
| MS.gene39903.t1 | MTR_5g091390 | 52.239 | 67 | 31 | 1 | 294 | 360 | 158 | 223 | 7.36e-17 | 80.5 |
| MS.gene39903.t1 | MTR_3g009470 | 37.500 | 112 | 57 | 3 | 251 | 350 | 441 | 551 | 8.35e-17 | 82.4 |
| MS.gene39903.t1 | MTR_3g009470 | 52.459 | 61 | 27 | 2 | 294 | 354 | 281 | 339 | 2.89e-12 | 68.2 |
| MS.gene39903.t1 | MTR_4g132430 | 52.308 | 65 | 28 | 1 | 294 | 358 | 262 | 323 | 9.36e-17 | 81.6 |
| MS.gene39903.t1 | MTR_4g107970 | 53.448 | 58 | 27 | 0 | 294 | 351 | 179 | 236 | 9.79e-17 | 81.6 |
| MS.gene39903.t1 | MTR_2g105060 | 51.667 | 60 | 29 | 0 | 291 | 350 | 167 | 226 | 1.08e-16 | 80.1 |
| MS.gene39903.t1 | MTR_2g105060 | 52.632 | 57 | 27 | 0 | 294 | 350 | 95 | 151 | 1.13e-16 | 79.0 |
| MS.gene39903.t1 | MTR_1g015140 | 38.384 | 99 | 58 | 2 | 252 | 350 | 63 | 158 | 1.42e-16 | 76.6 |
| MS.gene39903.t1 | MTR_4g107970 | 53.448 | 58 | 27 | 0 | 294 | 351 | 256 | 313 | 1.42e-16 | 81.3 |
| MS.gene39903.t1 | MTR_8g067650 | 47.170 | 106 | 45 | 3 | 261 | 359 | 300 | 401 | 1.45e-16 | 81.3 |
| MS.gene39903.t1 | MTR_2g045360 | 52.459 | 61 | 29 | 0 | 294 | 354 | 212 | 272 | 1.61e-16 | 80.9 |
| MS.gene39903.t1 | MTR_7g080020 | 48.780 | 82 | 37 | 3 | 277 | 355 | 474 | 553 | 2.12e-16 | 81.3 |
| MS.gene39903.t1 | MTR_7g080020 | 52.542 | 59 | 26 | 2 | 294 | 352 | 281 | 337 | 4.86e-11 | 64.7 |
| MS.gene39903.t1 | MTR_6g053200 | 43.678 | 87 | 46 | 1 | 266 | 352 | 306 | 389 | 6.26e-16 | 79.3 |
| MS.gene39903.t1 | MTR_1g013790 | 46.970 | 66 | 34 | 1 | 291 | 356 | 99 | 163 | 7.31e-16 | 77.0 |
| MS.gene39903.t1 | MTR_1g077780 | 43.182 | 88 | 48 | 2 | 273 | 360 | 42 | 127 | 8.87e-16 | 73.9 |
| MS.gene39903.t1 | MTR_5g097490 | 56.897 | 58 | 24 | 1 | 294 | 351 | 253 | 309 | 9.53e-16 | 78.2 |
| MS.gene39903.t1 | MTR_8g007270 | 39.583 | 96 | 52 | 3 | 268 | 360 | 126 | 218 | 9.73e-16 | 75.9 |
| MS.gene39903.t1 | MTR_8g092010 | 52.459 | 61 | 28 | 1 | 290 | 350 | 105 | 164 | 2.55e-15 | 73.9 |
| MS.gene39903.t1 | MTR_5g043880 | 41.860 | 86 | 49 | 1 | 268 | 353 | 99 | 183 | 2.88e-15 | 75.5 |
| MS.gene39903.t1 | MTR_7g079010 | 43.750 | 80 | 41 | 2 | 274 | 350 | 119 | 197 | 3.45e-15 | 74.3 |
| MS.gene39903.t1 | MTR_1g086790 | 39.759 | 83 | 49 | 1 | 268 | 350 | 133 | 214 | 3.72e-15 | 75.9 |
| MS.gene39903.t1 | MTR_8g092140 | 47.619 | 63 | 32 | 1 | 289 | 351 | 156 | 217 | 4.02e-15 | 74.3 |
| MS.gene39903.t1 | MTR_5g067680 | 38.462 | 117 | 64 | 4 | 250 | 359 | 155 | 270 | 4.91e-15 | 75.9 |
| MS.gene39903.t1 | MTR_3g090860 | 54.386 | 57 | 24 | 1 | 294 | 348 | 134 | 190 | 7.26e-15 | 75.1 |
| MS.gene39903.t1 | MTR_3g095080 | 47.619 | 63 | 32 | 1 | 289 | 351 | 140 | 201 | 8.68e-15 | 73.2 |
| MS.gene39903.t1 | MTR_4g049760 | 56.604 | 53 | 23 | 0 | 298 | 350 | 295 | 347 | 9.62e-15 | 75.9 |
| MS.gene39903.t1 | MTR_3g095080 | 47.619 | 63 | 32 | 1 | 289 | 351 | 164 | 225 | 1.09e-14 | 73.2 |
| MS.gene39903.t1 | MTR_3g095040 | 42.500 | 80 | 45 | 1 | 271 | 350 | 96 | 174 | 6.32e-14 | 70.5 |
| MS.gene39903.t1 | MTR_2g033820 | 50.877 | 57 | 27 | 1 | 294 | 350 | 204 | 259 | 7.03e-14 | 72.4 |
| MS.gene39903.t1 | MTR_7g117200 | 46.429 | 84 | 41 | 3 | 269 | 348 | 92 | 175 | 1.93e-13 | 70.9 |
| MS.gene39903.t1 | MTR_1g078260 | 53.846 | 65 | 28 | 2 | 290 | 353 | 244 | 307 | 2.25e-13 | 71.2 |
| MS.gene39903.t1 | MTR_3g031220 | 54.237 | 59 | 25 | 2 | 294 | 352 | 199 | 255 | 2.40e-13 | 70.9 |
| MS.gene39903.t1 | MTR_4g122530 | 47.368 | 57 | 29 | 1 | 294 | 350 | 209 | 264 | 3.76e-13 | 70.5 |
| MS.gene39903.t1 | MTR_8g027860 | 41.860 | 86 | 47 | 2 | 266 | 348 | 108 | 193 | 8.66e-13 | 68.9 |
| MS.gene39903.t1 | MTR_7g028415 | 45.161 | 62 | 33 | 1 | 289 | 350 | 89 | 149 | 1.01e-12 | 66.2 |
| MS.gene39903.t1 | MTR_7g028710 | 45.161 | 62 | 33 | 1 | 289 | 350 | 89 | 149 | 1.01e-12 | 66.2 |
| MS.gene39903.t1 | MTR_8g099350 | 41.667 | 84 | 46 | 2 | 268 | 348 | 106 | 189 | 1.87e-12 | 68.2 |
| MS.gene39903.t1 | MTR_5g018380 | 51.724 | 58 | 25 | 2 | 293 | 350 | 123 | 177 | 2.29e-12 | 65.5 |
| MS.gene39903.t1 | MTR_3g009470 | 52.459 | 61 | 27 | 2 | 294 | 354 | 281 | 339 | 2.33e-12 | 68.6 |
| MS.gene39903.t1 | MTR_6g086555 | 30.968 | 155 | 91 | 5 | 198 | 351 | 125 | 264 | 3.74e-12 | 67.4 |
| MS.gene39903.t1 | MTR_8g087000 | 64.103 | 39 | 14 | 0 | 313 | 351 | 35 | 73 | 3.78e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39903.t1 | AT2G30590 | 55.844 | 385 | 132 | 14 | 1 | 356 | 1 | 376 | 6.71e-116 | 341 |
| MS.gene39903.t1 | AT3G04670 | 50.959 | 365 | 124 | 13 | 1 | 353 | 1 | 322 | 5.71e-104 | 309 |
| MS.gene39903.t1 | AT5G28650 | 48.787 | 371 | 123 | 12 | 1 | 353 | 1 | 322 | 7.74e-100 | 298 |
| MS.gene39903.t1 | AT3G04670 | 47.416 | 329 | 118 | 13 | 1 | 317 | 1 | 286 | 2.64e-75 | 234 |
| MS.gene39903.t1 | AT4G31550 | 51.087 | 184 | 60 | 6 | 180 | 350 | 137 | 303 | 1.07e-53 | 180 |
| MS.gene39903.t1 | AT4G31550 | 51.630 | 184 | 58 | 7 | 180 | 350 | 137 | 302 | 7.70e-53 | 177 |
| MS.gene39903.t1 | AT2G24570 | 56.376 | 149 | 51 | 3 | 214 | 350 | 154 | 300 | 1.02e-52 | 177 |
| MS.gene39903.t1 | AT4G24240 | 54.545 | 176 | 55 | 6 | 187 | 353 | 182 | 341 | 1.36e-52 | 178 |
| MS.gene39903.t1 | AT2G23320 | 70.000 | 110 | 29 | 2 | 245 | 351 | 190 | 298 | 1.30e-50 | 172 |
| MS.gene39903.t1 | AT1G29280 | 55.435 | 92 | 34 | 3 | 266 | 350 | 40 | 131 | 2.76e-27 | 108 |
| MS.gene39903.t1 | AT4G31550 | 44.218 | 147 | 51 | 7 | 180 | 313 | 137 | 265 | 4.32e-26 | 105 |
| MS.gene39903.t1 | AT3G58710 | 50.980 | 102 | 33 | 3 | 269 | 359 | 40 | 135 | 1.46e-25 | 104 |
| MS.gene39903.t1 | AT2G34830 | 49.524 | 105 | 47 | 2 | 257 | 356 | 174 | 277 | 2.30e-25 | 106 |
| MS.gene39903.t1 | AT4G24240 | 47.059 | 136 | 47 | 6 | 187 | 313 | 182 | 301 | 2.36e-25 | 104 |
| MS.gene39903.t1 | AT2G34830 | 49.524 | 105 | 47 | 2 | 257 | 356 | 183 | 286 | 2.46e-25 | 106 |
| MS.gene39903.t1 | AT3G58710 | 50.000 | 102 | 34 | 3 | 269 | 359 | 41 | 136 | 6.89e-25 | 102 |
| MS.gene39903.t1 | AT2G23320 | 66.667 | 72 | 20 | 2 | 245 | 313 | 190 | 260 | 7.75e-25 | 102 |
| MS.gene39903.t1 | AT4G01250 | 45.600 | 125 | 62 | 2 | 227 | 350 | 66 | 185 | 4.63e-24 | 100 |
| MS.gene39903.t1 | AT1G30650 | 52.874 | 87 | 36 | 1 | 269 | 350 | 188 | 274 | 8.08e-24 | 102 |
| MS.gene39903.t1 | AT5G52830 | 52.941 | 85 | 36 | 1 | 268 | 352 | 144 | 224 | 7.20e-22 | 95.5 |
| MS.gene39903.t1 | AT5G26170 | 52.308 | 65 | 30 | 1 | 289 | 353 | 109 | 172 | 1.20e-19 | 85.5 |
| MS.gene39903.t1 | AT4G23550 | 60.317 | 63 | 24 | 1 | 294 | 356 | 141 | 202 | 1.23e-19 | 88.6 |
| MS.gene39903.t1 | AT2G04880 | 58.209 | 67 | 27 | 1 | 288 | 354 | 278 | 343 | 2.97e-19 | 89.0 |
| MS.gene39903.t1 | AT2G04880 | 58.209 | 67 | 27 | 1 | 288 | 354 | 302 | 367 | 3.31e-19 | 89.0 |
| MS.gene39903.t1 | AT4G18170 | 38.017 | 121 | 67 | 3 | 235 | 355 | 120 | 232 | 3.46e-19 | 87.4 |
| MS.gene39903.t1 | AT5G07100 | 48.837 | 86 | 41 | 3 | 270 | 355 | 119 | 201 | 1.16e-18 | 84.0 |
| MS.gene39903.t1 | AT5G07100 | 48.529 | 68 | 31 | 2 | 285 | 352 | 19 | 82 | 1.30e-12 | 67.0 |
| MS.gene39903.t1 | AT5G07100 | 48.837 | 86 | 41 | 3 | 270 | 355 | 119 | 201 | 1.16e-18 | 84.0 |
| MS.gene39903.t1 | AT5G07100 | 48.529 | 68 | 31 | 2 | 285 | 352 | 19 | 82 | 1.30e-12 | 67.0 |
| MS.gene39903.t1 | AT5G07100 | 48.837 | 86 | 41 | 3 | 270 | 355 | 119 | 201 | 1.16e-18 | 84.0 |
| MS.gene39903.t1 | AT5G07100 | 48.529 | 68 | 31 | 2 | 285 | 352 | 19 | 82 | 1.30e-12 | 67.0 |
| MS.gene39903.t1 | AT5G07100 | 48.837 | 86 | 41 | 3 | 270 | 355 | 119 | 201 | 1.16e-18 | 84.0 |
| MS.gene39903.t1 | AT5G07100 | 48.529 | 68 | 31 | 2 | 285 | 352 | 19 | 82 | 1.30e-12 | 67.0 |
| MS.gene39903.t1 | AT1G13960 | 44.211 | 95 | 39 | 2 | 269 | 350 | 219 | 312 | 2.57e-18 | 85.5 |
| MS.gene39903.t1 | AT1G13960 | 56.452 | 62 | 24 | 3 | 290 | 350 | 72 | 131 | 2.13e-14 | 73.9 |
| MS.gene39903.t1 | AT2G38470 | 59.016 | 61 | 24 | 1 | 290 | 350 | 359 | 418 | 2.58e-18 | 86.7 |
| MS.gene39903.t1 | AT2G38470 | 54.237 | 59 | 25 | 2 | 294 | 352 | 185 | 241 | 3.25e-13 | 71.2 |
| MS.gene39903.t1 | AT4G04450 | 47.561 | 82 | 40 | 1 | 277 | 358 | 182 | 260 | 3.16e-18 | 85.9 |
| MS.gene39903.t1 | AT4G26640 | 56.716 | 67 | 27 | 2 | 289 | 355 | 201 | 265 | 3.20e-18 | 85.5 |
| MS.gene39903.t1 | AT4G26640 | 56.716 | 67 | 27 | 2 | 289 | 355 | 201 | 265 | 3.20e-18 | 85.5 |
| MS.gene39903.t1 | AT4G26640 | 56.716 | 67 | 27 | 2 | 289 | 355 | 201 | 265 | 3.20e-18 | 85.5 |
| MS.gene39903.t1 | AT4G26640 | 56.716 | 67 | 27 | 2 | 289 | 355 | 201 | 265 | 3.20e-18 | 85.5 |
| MS.gene39903.t1 | AT4G04450 | 47.561 | 82 | 40 | 1 | 277 | 358 | 276 | 354 | 4.17e-18 | 85.9 |
| MS.gene39903.t1 | AT1G13960 | 44.211 | 95 | 39 | 2 | 269 | 350 | 372 | 465 | 4.60e-18 | 85.9 |
| MS.gene39903.t1 | AT1G13960 | 48.101 | 79 | 32 | 4 | 272 | 350 | 215 | 284 | 3.26e-14 | 73.9 |
| MS.gene39903.t1 | AT5G07100 | 48.837 | 86 | 41 | 3 | 270 | 355 | 212 | 294 | 5.00e-18 | 84.0 |
| MS.gene39903.t1 | AT5G07100 | 48.529 | 68 | 31 | 2 | 285 | 352 | 112 | 175 | 3.07e-12 | 67.0 |
| MS.gene39903.t1 | AT4G26640 | 56.716 | 67 | 27 | 2 | 289 | 355 | 305 | 369 | 5.27e-18 | 85.5 |
| MS.gene39903.t1 | AT1G68150 | 57.895 | 57 | 24 | 0 | 294 | 350 | 236 | 292 | 5.46e-18 | 84.7 |
| MS.gene39903.t1 | AT4G26640 | 56.716 | 67 | 27 | 2 | 289 | 355 | 337 | 401 | 6.28e-18 | 85.5 |
| MS.gene39903.t1 | AT4G26640 | 56.716 | 67 | 27 | 2 | 289 | 355 | 377 | 441 | 6.36e-18 | 85.5 |
| MS.gene39903.t1 | AT5G45050 | 45.783 | 83 | 41 | 1 | 268 | 350 | 1131 | 1209 | 6.98e-18 | 85.9 |
| MS.gene39903.t1 | AT5G45050 | 45.783 | 83 | 41 | 1 | 268 | 350 | 1159 | 1237 | 8.19e-18 | 85.5 |
| MS.gene39903.t1 | AT5G45050 | 45.783 | 83 | 41 | 1 | 268 | 350 | 1020 | 1098 | 8.51e-18 | 85.5 |
| MS.gene39903.t1 | AT1G62300 | 44.186 | 86 | 40 | 1 | 269 | 354 | 296 | 373 | 1.58e-17 | 84.3 |
| MS.gene39903.t1 | AT4G22070 | 46.154 | 78 | 42 | 0 | 277 | 354 | 281 | 358 | 2.37e-17 | 83.6 |
| MS.gene39903.t1 | AT4G22070 | 46.154 | 78 | 42 | 0 | 277 | 354 | 281 | 358 | 2.37e-17 | 83.6 |
| MS.gene39903.t1 | AT4G22070 | 46.154 | 78 | 42 | 0 | 277 | 354 | 281 | 358 | 2.37e-17 | 83.6 |
| MS.gene39903.t1 | AT4G22070 | 46.154 | 78 | 42 | 0 | 277 | 354 | 281 | 358 | 2.37e-17 | 83.6 |
| MS.gene39903.t1 | AT2G03340 | 46.154 | 78 | 41 | 1 | 273 | 350 | 395 | 471 | 2.79e-17 | 83.6 |
| MS.gene39903.t1 | AT2G03340 | 55.556 | 63 | 25 | 3 | 289 | 350 | 245 | 305 | 8.28e-14 | 72.8 |
| MS.gene39903.t1 | AT1G29860 | 44.595 | 74 | 40 | 1 | 277 | 350 | 120 | 192 | 2.80e-17 | 81.6 |
| MS.gene39903.t1 | AT5G49520 | 56.140 | 57 | 24 | 1 | 294 | 350 | 222 | 277 | 2.90e-17 | 82.8 |
| MS.gene39903.t1 | AT4G01720 | 55.738 | 61 | 27 | 0 | 294 | 354 | 240 | 300 | 3.23e-17 | 83.2 |
| MS.gene39903.t1 | AT4G30935 | 56.140 | 57 | 24 | 1 | 294 | 350 | 332 | 387 | 3.80e-17 | 82.8 |
| MS.gene39903.t1 | AT5G15130 | 55.172 | 58 | 26 | 0 | 294 | 351 | 186 | 243 | 5.68e-17 | 82.4 |
| MS.gene39903.t1 | AT5G15130 | 55.172 | 58 | 26 | 0 | 294 | 351 | 228 | 285 | 5.98e-17 | 82.4 |
| MS.gene39903.t1 | AT4G31800 | 41.096 | 73 | 43 | 0 | 278 | 350 | 96 | 168 | 1.40e-16 | 79.0 |
| MS.gene39903.t1 | AT5G56270 | 49.351 | 77 | 35 | 2 | 277 | 350 | 468 | 543 | 1.68e-16 | 81.3 |
| MS.gene39903.t1 | AT5G56270 | 50.820 | 61 | 28 | 2 | 294 | 354 | 274 | 332 | 4.81e-11 | 64.7 |
| MS.gene39903.t1 | AT3G01080 | 47.436 | 78 | 40 | 1 | 273 | 350 | 286 | 362 | 2.02e-16 | 80.5 |
| MS.gene39903.t1 | AT3G01080 | 51.562 | 64 | 28 | 3 | 290 | 352 | 163 | 224 | 6.32e-13 | 70.1 |
| MS.gene39903.t1 | AT3G01080 | 47.436 | 78 | 40 | 1 | 273 | 350 | 324 | 400 | 2.12e-16 | 80.5 |
| MS.gene39903.t1 | AT3G01080 | 51.562 | 64 | 28 | 3 | 290 | 352 | 201 | 262 | 6.25e-13 | 70.1 |
| MS.gene39903.t1 | AT2G37260 | 43.137 | 102 | 52 | 2 | 249 | 350 | 230 | 325 | 2.29e-16 | 79.7 |
| MS.gene39903.t1 | AT2G37260 | 54.237 | 59 | 25 | 2 | 294 | 352 | 86 | 142 | 1.08e-12 | 68.9 |
| MS.gene39903.t1 | AT4G31800 | 41.096 | 73 | 43 | 0 | 278 | 350 | 161 | 233 | 2.29e-16 | 79.3 |
| MS.gene39903.t1 | AT2G40740 | 40.860 | 93 | 52 | 2 | 259 | 348 | 138 | 230 | 2.42e-16 | 79.0 |
| MS.gene39903.t1 | AT2G37260 | 43.137 | 102 | 52 | 2 | 249 | 350 | 228 | 323 | 2.50e-16 | 79.7 |
| MS.gene39903.t1 | AT2G37260 | 54.237 | 59 | 25 | 2 | 294 | 352 | 84 | 140 | 1.08e-12 | 68.9 |
| MS.gene39903.t1 | AT2G37260 | 43.137 | 102 | 52 | 2 | 249 | 350 | 310 | 405 | 3.35e-16 | 79.7 |
| MS.gene39903.t1 | AT2G37260 | 54.237 | 59 | 25 | 2 | 294 | 352 | 166 | 222 | 1.04e-12 | 69.3 |
| MS.gene39903.t1 | AT2G40740 | 40.860 | 93 | 52 | 2 | 259 | 348 | 147 | 239 | 3.41e-16 | 78.6 |
| MS.gene39903.t1 | AT5G45260 | 46.237 | 93 | 38 | 4 | 269 | 356 | 1187 | 1272 | 3.65e-16 | 80.5 |
| MS.gene39903.t1 | AT5G43290 | 49.367 | 79 | 36 | 2 | 276 | 354 | 100 | 174 | 4.23e-16 | 77.8 |
| MS.gene39903.t1 | AT4G39410 | 41.860 | 86 | 46 | 2 | 269 | 351 | 196 | 280 | 4.23e-16 | 78.6 |
| MS.gene39903.t1 | AT2G47260 | 40.964 | 83 | 48 | 1 | 268 | 350 | 149 | 230 | 8.96e-16 | 77.8 |
| MS.gene39903.t1 | AT5G46350 | 51.613 | 62 | 28 | 2 | 294 | 355 | 184 | 243 | 1.06e-15 | 77.4 |
| MS.gene39903.t1 | AT4G26440 | 46.914 | 81 | 41 | 2 | 274 | 354 | 353 | 431 | 1.27e-15 | 78.6 |
| MS.gene39903.t1 | AT4G26440 | 51.562 | 64 | 28 | 3 | 292 | 354 | 176 | 237 | 1.82e-11 | 65.9 |
| MS.gene39903.t1 | AT1G69310 | 41.176 | 85 | 49 | 1 | 269 | 353 | 123 | 206 | 1.38e-15 | 76.6 |
| MS.gene39903.t1 | AT1G69310 | 41.176 | 85 | 49 | 1 | 269 | 353 | 123 | 206 | 1.38e-15 | 76.6 |
| MS.gene39903.t1 | AT1G69310 | 41.176 | 85 | 49 | 1 | 269 | 353 | 123 | 206 | 1.38e-15 | 76.6 |
| MS.gene39903.t1 | AT3G62340 | 43.902 | 82 | 45 | 1 | 271 | 352 | 96 | 176 | 1.49e-15 | 76.3 |
| MS.gene39903.t1 | AT2G44745 | 38.298 | 94 | 52 | 3 | 270 | 360 | 119 | 209 | 1.68e-15 | 75.1 |
| MS.gene39903.t1 | AT1G80840 | 36.975 | 119 | 62 | 4 | 245 | 350 | 85 | 203 | 1.73e-15 | 76.6 |
| MS.gene39903.t1 | AT1G18860 | 54.386 | 57 | 26 | 0 | 294 | 350 | 240 | 296 | 1.83e-15 | 77.8 |
| MS.gene39903.t1 | AT1G55600 | 50.725 | 69 | 30 | 2 | 290 | 358 | 304 | 368 | 2.04e-15 | 77.8 |
| MS.gene39903.t1 | AT1G69810 | 46.988 | 83 | 35 | 2 | 269 | 350 | 187 | 261 | 4.12e-15 | 76.3 |
| MS.gene39903.t1 | AT1G69810 | 46.988 | 83 | 35 | 2 | 269 | 350 | 129 | 203 | 4.44e-15 | 75.9 |
| MS.gene39903.t1 | AT2G21900 | 56.140 | 57 | 24 | 1 | 294 | 350 | 110 | 165 | 5.88e-15 | 73.2 |
| MS.gene39903.t1 | AT2G25000 | 49.123 | 57 | 29 | 0 | 294 | 350 | 104 | 160 | 6.09e-15 | 73.9 |
| MS.gene39903.t1 | AT2G25000 | 49.123 | 57 | 29 | 0 | 294 | 350 | 104 | 160 | 6.09e-15 | 73.9 |
| MS.gene39903.t1 | AT5G41570 | 43.529 | 85 | 44 | 2 | 269 | 350 | 71 | 154 | 8.64e-15 | 72.4 |
| MS.gene39903.t1 | AT5G64810 | 49.180 | 61 | 30 | 1 | 290 | 350 | 107 | 166 | 1.17e-14 | 72.4 |
| MS.gene39903.t1 | AT2G25000 | 49.123 | 57 | 29 | 0 | 294 | 350 | 126 | 182 | 1.20e-14 | 73.2 |
| MS.gene39903.t1 | AT2G25000 | 49.123 | 57 | 29 | 0 | 294 | 350 | 147 | 203 | 1.40e-14 | 73.6 |
| MS.gene39903.t1 | AT2G46130 | 50.000 | 62 | 30 | 1 | 289 | 350 | 26 | 86 | 2.34e-14 | 68.9 |
| MS.gene39903.t1 | AT1G64000 | 38.095 | 84 | 51 | 1 | 267 | 350 | 88 | 170 | 2.34e-14 | 71.2 |
| MS.gene39903.t1 | AT2G30250 | 42.857 | 84 | 43 | 4 | 275 | 355 | 307 | 388 | 4.30e-14 | 73.2 |
| MS.gene39903.t1 | AT3G01970 | 47.619 | 63 | 32 | 1 | 289 | 351 | 61 | 122 | 1.13e-13 | 68.2 |
| MS.gene39903.t1 | AT3G01080 | 51.562 | 64 | 28 | 3 | 290 | 352 | 201 | 262 | 4.97e-13 | 69.7 |
| MS.gene39903.t1 | AT5G13080 | 45.161 | 62 | 33 | 1 | 289 | 350 | 63 | 123 | 8.67e-13 | 65.9 |
| MS.gene39903.t1 | AT4G11070 | 36.975 | 119 | 63 | 3 | 233 | 348 | 89 | 198 | 2.03e-12 | 67.8 |
| MS.gene39903.t1 | AT4G11070 | 36.975 | 119 | 63 | 3 | 233 | 348 | 57 | 166 | 2.11e-12 | 67.4 |
| MS.gene39903.t1 | AT4G23810 | 45.882 | 85 | 43 | 2 | 268 | 349 | 132 | 216 | 5.28e-12 | 66.6 |
| MS.gene39903.t1 | AT1G69310 | 48.333 | 60 | 26 | 2 | 294 | 353 | 148 | 202 | 2.14e-11 | 64.3 |
| MS.gene39903.t1 | AT1G66560 | 47.458 | 59 | 29 | 1 | 292 | 348 | 102 | 160 | 9.14e-11 | 62.0 |
| MS.gene39903.t1 | AT4G12020 | 50.877 | 57 | 26 | 2 | 294 | 350 | 469 | 523 | 9.58e-11 | 63.9 |
| MS.gene39903.t1 | AT4G12020 | 50.877 | 57 | 26 | 2 | 294 | 350 | 469 | 523 | 9.58e-11 | 63.9 |
Find 77 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGCAGTTCATGCATTTGC+AGG | 0.256684 | 1.4:+57814047 | None:intergenic |
| TTCTCTTGGAAACCCTTCTT+TGG | 0.278708 | 1.4:-57815384 | MS.gene39903:CDS |
| AAAGTTGTGTCTTTGCTTCA+TGG | 0.278912 | 1.4:-57815596 | MS.gene39903:CDS |
| TAGTAGCCTTGTCAAAATTA+AGG | 0.303036 | 1.4:+57815159 | None:intergenic |
| TAGAGTGAAGAGATCAATTA+AGG | 0.339973 | 1.4:-57814815 | MS.gene39903:CDS |
| CAAAATTCAGTTCAGGAACT+TGG | 0.342737 | 1.4:-57815428 | MS.gene39903:CDS |
| GGAAGTTCCTTCCATTTGAT+TGG | 0.353546 | 1.4:-57815059 | MS.gene39903:CDS |
| TGTGTCTTTGCTTCATGGTT+TGG | 0.359375 | 1.4:-57815591 | MS.gene39903:CDS |
| GTTTGGATCATTCAAGAGTT+AGG | 0.362142 | 1.4:-57815574 | MS.gene39903:CDS |
| AAGAAAGCAGTTTGAGGATA+AGG | 0.371998 | 1.4:+57815527 | None:intergenic |
| CTAAGAAATCCACTTTCTCT+TGG | 0.374963 | 1.4:-57815398 | MS.gene39903:CDS |
| AGGAATTTAACTGTTGAAAC+TGG | 0.385192 | 1.4:-57815641 | MS.gene39903:CDS |
| GTGATTATGCTCGCCTTCAT+AGG | 0.392014 | 1.4:+57814088 | None:intergenic |
| CAAGGGATCAAGTTCATCAT+AGG | 0.420309 | 1.4:-57815661 | MS.gene39903:CDS |
| TTATGCCGCTGGTGTTCCTT+CGG | 0.429874 | 1.4:+57815183 | None:intergenic |
| TTTGAACTCAATTCCAAAGA+AGG | 0.431276 | 1.4:+57815371 | None:intergenic |
| CTATCCTCAAAATTCAGTTC+AGG | 0.434300 | 1.4:-57815435 | MS.gene39903:CDS |
| CACCAACAATGTCGTCTACT+AGG | 0.435790 | 1.4:-57815130 | MS.gene39903:CDS |
| CTTTGGAATTGAGTTCAAAC+GGG | 0.435936 | 1.4:-57815367 | MS.gene39903:CDS |
| CTCTCAACATGCTTCCTAGC+AGG | 0.437995 | 1.4:+57814143 | None:intergenic |
| TAAGTATGTTGTCTCAATCA+AGG | 0.450290 | 1.4:-57815679 | MS.gene39903:CDS |
| TAGGTAACCATTAGCATAGT+AGG | 0.453570 | 1.4:+57814107 | None:intergenic |
| GGGTGAGGAGAGCCCTTGAT+AGG | 0.454162 | 1.4:+57814721 | None:intergenic |
| TGCAGGTTGTGTTGGTACCT+TGG | 0.458215 | 1.4:+57814064 | None:intergenic |
| AGAAAGCAGTTTGAGGATAA+GGG | 0.460093 | 1.4:+57815528 | None:intergenic |
| AGATCGGAGCTCCAATCAAA+TGG | 0.468483 | 1.4:+57815048 | None:intergenic |
| ATGCTAATGGTTACCTATGA+AGG | 0.471493 | 1.4:-57814101 | MS.gene39903:CDS |
| TTCCTCCATGAGTAATCATC+AGG | 0.472648 | 1.4:+57814757 | None:intergenic |
| GCATGAGAGGCTGCCCTGCT+AGG | 0.472837 | 1.4:-57814157 | MS.gene39903:CDS |
| TCTTTGGAATTGAGTTCAAA+CGG | 0.478409 | 1.4:-57815368 | MS.gene39903:CDS |
| GGATGAGCCTACTATGCTAA+TGG | 0.481224 | 1.4:-57814114 | MS.gene39903:CDS |
| TTTGTTGCTGCAGCTGCTGT+TGG | 0.487273 | 1.4:+57815267 | None:intergenic |
| AAAATTAAGGCTTATGCCGC+TGG | 0.488025 | 1.4:+57815172 | None:intergenic |
| GAAGGGTTTCCAAGAGAAAG+TGG | 0.494949 | 1.4:+57815389 | None:intergenic |
| GCAAGCTTGTTGCTGATAGC+AGG | 0.495556 | 1.4:+57814790 | None:intergenic |
| GATTACTCATGGAGGAAGTA+CGG | 0.498681 | 1.4:-57814751 | MS.gene39903:CDS |
| TTGAACTCAATTCCAAAGAA+GGG | 0.509941 | 1.4:+57815372 | None:intergenic |
| GTACGGGCAGAAGCCTATCA+AGG | 0.510514 | 1.4:-57814734 | MS.gene39903:CDS |
| CATGCATTTGCAGGTTGTGT+TGG | 0.511678 | 1.4:+57814056 | None:intergenic |
| GACCTAGTAGACGACATTGT+TGG | 0.517470 | 1.4:+57815128 | None:intergenic |
| AAACTGGTGAAGCTGTGAAT+AGG | 0.523498 | 1.4:-57815625 | MS.gene39903:CDS |
| ATTACCTCTTCTTTGAGCAA+TGG | 0.528866 | 1.4:+57814940 | None:intergenic |
| TTGTCTAAGAAAGCAGTTTG+AGG | 0.538734 | 1.4:+57815521 | None:intergenic |
| TCCCTCCTGATGATTACTCA+TGG | 0.545497 | 1.4:-57814762 | MS.gene39903:CDS |
| GGAAGCGTGGCTAACGTGGA+TGG | 0.552072 | 1.4:-57815080 | MS.gene39903:CDS |
| AATGCCATTGCTCAAAGAAG+AGG | 0.554797 | 1.4:-57814944 | MS.gene39903:intron |
| ATTTCCTCCTTGAGCATAGA+CGG | 0.557646 | 1.4:-57815101 | MS.gene39903:CDS |
| ATTACTCATGGAGGAAGTAC+GGG | 0.557772 | 1.4:-57814750 | MS.gene39903:CDS |
| GAATTCTGATCTGAAGAGAT+CGG | 0.560341 | 1.4:+57815032 | None:intergenic |
| CACGCTTCCGTCTATGCTCA+AGG | 0.561562 | 1.4:+57815094 | None:intergenic |
| AGACGGAAGCGTGGCTAACG+TGG | 0.565434 | 1.4:-57815084 | MS.gene39903:CDS |
| TCTCAACATGCTTCCTAGCA+GGG | 0.575418 | 1.4:+57814144 | None:intergenic |
| TCAAGGGCTCTCCTCACCCT+AGG | 0.577561 | 1.4:-57814717 | MS.gene39903:intron |
| ATGTTCTGCTAGAGGTGATG+AGG | 0.577879 | 1.4:-57814994 | MS.gene39903:CDS |
| TATAAGTGCAGCAGCATGAG+AGG | 0.580000 | 1.4:-57814170 | MS.gene39903:CDS |
| AAGTATGTTGTCTCAATCAA+GGG | 0.580385 | 1.4:-57815678 | MS.gene39903:CDS |
| ATCAGAATTCACAGCACAAG+AGG | 0.581042 | 1.4:-57815019 | MS.gene39903:CDS |
| TGCTATCAGCAACAAGCTTG+CGG | 0.581834 | 1.4:-57814788 | MS.gene39903:CDS |
| CGGAGCTCCAATCAAATGGA+AGG | 0.586112 | 1.4:+57815052 | None:intergenic |
| GAAGCATGTTGAGAGGTGCT+TGG | 0.586233 | 1.4:-57814135 | MS.gene39903:CDS |
| CTCCATGAGTAATCATCAGG+AGG | 0.604331 | 1.4:+57814760 | None:intergenic |
| AACAGCAGCTGCAGCAACAA+AGG | 0.622186 | 1.4:-57815265 | MS.gene39903:CDS |
| ACTTGTTGAGCAAGGTGAAG+CGG | 0.623792 | 1.4:+57815338 | None:intergenic |
| TGTTCTGCTAGAGGTGATGA+GGG | 0.623984 | 1.4:-57814993 | MS.gene39903:CDS |
| AAGCTGAAATGATGTTCCGA+AGG | 0.624862 | 1.4:-57815199 | MS.gene39903:CDS |
| AAGAGGAAATGTTCTGCTAG+AGG | 0.625674 | 1.4:-57815002 | MS.gene39903:CDS |
| TTGATGCAACTTGTTGAGCA+AGG | 0.628567 | 1.4:+57815330 | None:intergenic |
| TCCATGAGTAATCATCAGGA+GGG | 0.631195 | 1.4:+57814761 | None:intergenic |
| GGTTGGACATACCTAGGGTG+AGG | 0.641458 | 1.4:+57814706 | None:intergenic |
| TACGGGCAGAAGCCTATCAA+GGG | 0.654538 | 1.4:-57814733 | MS.gene39903:CDS |
| CTTGAGCATAGACGGAAGCG+TGG | 0.674043 | 1.4:-57815093 | MS.gene39903:CDS |
| AGGCGAGCATAATCACGCCA+AGG | 0.679418 | 1.4:-57814081 | MS.gene39903:CDS |
| CTCCTGATGATTACTCATGG+AGG | 0.692245 | 1.4:-57814759 | MS.gene39903:CDS |
| TGGTGATGATGCTGTTGCTG+CGG | 0.703851 | 1.4:+57815287 | None:intergenic |
| CTGCTAGGAAGCATGTTGAG+AGG | 0.707257 | 1.4:-57814142 | MS.gene39903:CDS |
| ATGTTCCGAAGGAACACCAG+CGG | 0.729358 | 1.4:-57815188 | MS.gene39903:CDS |
| GCTTCCGTCTATGCTCAAGG+AGG | 0.768540 | 1.4:+57815097 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAATATCATATTACAA+TGG | + | chr1.4:57814929-57814948 | None:intergenic | 10.0% |
| !! | TGTAATGAAAATTACAAACA+TGG | + | chr1.4:57815375-57815394 | None:intergenic | 20.0% |
| !! | TTAAATCTCAAATAGCAAAA+CGG | + | chr1.4:57815107-57815126 | None:intergenic | 20.0% |
| !!! | AATTTTATTGATTCGATTCA+AGG | - | chr1.4:57815125-57815144 | MS.gene39903:CDS | 20.0% |
| !!! | ACATGTTCAAGTTAAAAAAA+AGG | + | chr1.4:57815432-57815451 | None:intergenic | 20.0% |
| !!! | CATGTTCAAGTTAAAAAAAA+GGG | + | chr1.4:57815431-57815450 | None:intergenic | 20.0% |
| !!! | GTTAATTTCTGTTACTTTAA+AGG | - | chr1.4:57814894-57814913 | MS.gene39903:intron | 20.0% |
| ! | AAAATTACAAACATGGACAA+AGG | + | chr1.4:57815368-57815387 | None:intergenic | 25.0% |
| ! | AAAATTATTTAAATCCCCAC+AGG | + | chr1.4:57815295-57815314 | None:intergenic | 25.0% |
| ! | CATTATTGTCAATCAAATGA+AGG | - | chr1.4:57815514-57815533 | MS.gene39903:CDS | 25.0% |
| ! | TGACAATAATGTGACAATAA+TGG | + | chr1.4:57815505-57815524 | None:intergenic | 25.0% |
| ! | TGGATATGTAATATGTTGAT+TGG | - | chr1.4:57815325-57815344 | MS.gene39903:CDS | 25.0% |
| !! | ATGATGTTTCTTTTGCAATT+TGG | + | chr1.4:57814295-57814314 | None:intergenic | 25.0% |
| !! | TCTAATGGTTGATACATTAA+TGG | - | chr1.4:57814872-57814891 | MS.gene39903:intron | 25.0% |
| !! | TGATGTTTCTTTTGCAATTT+GGG | + | chr1.4:57814294-57814313 | None:intergenic | 25.0% |
| !! | TGTGGGGATTTAAATAATTT+TGG | - | chr1.4:57815294-57815313 | MS.gene39903:CDS | 25.0% |
| !! | TTGAGTAAAGTGAACATTTT+TGG | + | chr1.4:57814329-57814348 | None:intergenic | 25.0% |
| !!! | AAATAATTTTGGTCTATGTG+TGG | - | chr1.4:57815305-57815324 | MS.gene39903:CDS | 25.0% |
| AAGTATGTTGTCTCAATCAA+GGG | - | chr1.4:57814111-57814130 | MS.gene39903:CDS | 30.0% | |
| AGGAATTTAACTGTTGAAAC+TGG | - | chr1.4:57814148-57814167 | MS.gene39903:CDS | 30.0% | |
| CAAAGAAGAGGTAATTCTAA+TGG | - | chr1.4:57814857-57814876 | MS.gene39903:intron | 30.0% | |
| GAGCATCAAAATTGCAAAAT+CGG | + | chr1.4:57815463-57815482 | None:intergenic | 30.0% | |
| TAAGTATGTTGTCTCAATCA+AGG | - | chr1.4:57814110-57814129 | MS.gene39903:CDS | 30.0% | |
| TAGAGTGAAGAGATCAATTA+AGG | - | chr1.4:57814974-57814993 | MS.gene39903:CDS | 30.0% | |
| TTGAACTCAATTCCAAAGAA+GGG | + | chr1.4:57814420-57814439 | None:intergenic | 30.0% | |
| TTTGAACTCAATTCCAAAGA+AGG | + | chr1.4:57814421-57814440 | None:intergenic | 30.0% | |
| !! | AACTATTTTGTTATGCTGCT+TGG | - | chr1.4:57815200-57815219 | MS.gene39903:CDS | 30.0% |
| !! | CATAAGCCTTAATTTTGACA+AGG | - | chr1.4:57814624-57814643 | MS.gene39903:intron | 30.0% |
| !! | GTCTTGATTTTGTTTCTTCA+GGG | - | chr1.4:57815591-57815610 | MS.gene39903:CDS | 30.0% |
| !! | TAGTAGCCTTGTCAAAATTA+AGG | + | chr1.4:57814633-57814652 | None:intergenic | 30.0% |
| !! | TCTTGATTTTGTTTCTTCAG+GGG | - | chr1.4:57815592-57815611 | MS.gene39903:CDS | 30.0% |
| !! | TCTTTGGAATTGAGTTCAAA+CGG | - | chr1.4:57814421-57814440 | MS.gene39903:intron | 30.0% |
| !! | TGTCTTGATTTTGTTTCTTC+AGG | - | chr1.4:57815590-57815609 | MS.gene39903:CDS | 30.0% |
| !! | TTTTGCAATTTTGATGCTCT+AGG | - | chr1.4:57815464-57815483 | MS.gene39903:CDS | 30.0% |
| AAAAAGGGCTATCGAACATA+TGG | + | chr1.4:57815416-57815435 | None:intergenic | 35.0% | |
| AAAGTTGTGTCTTTGCTTCA+TGG | - | chr1.4:57814193-57814212 | MS.gene39903:intron | 35.0% | |
| AAGAAAGCAGTTTGAGGATA+AGG | + | chr1.4:57814265-57814284 | None:intergenic | 35.0% | |
| AGAAAGCAGTTTGAGGATAA+GGG | + | chr1.4:57814264-57814283 | None:intergenic | 35.0% | |
| ATCTCAAATAGCAAAACGGT+TGG | + | chr1.4:57815103-57815122 | None:intergenic | 35.0% | |
| ATGCTAATGGTTACCTATGA+AGG | - | chr1.4:57815688-57815707 | MS.gene39903:CDS | 35.0% | |
| ATTACCTCTTCTTTGAGCAA+TGG | + | chr1.4:57814852-57814871 | None:intergenic | 35.0% | |
| CAAAATTCAGTTCAGGAACT+TGG | - | chr1.4:57814361-57814380 | MS.gene39903:intron | 35.0% | |
| CTAAGAAATCCACTTTCTCT+TGG | - | chr1.4:57814391-57814410 | MS.gene39903:intron | 35.0% | |
| CTATCCTCAAAATTCAGTTC+AGG | - | chr1.4:57814354-57814373 | MS.gene39903:intron | 35.0% | |
| GAATTCTGATCTGAAGAGAT+CGG | + | chr1.4:57814760-57814779 | None:intergenic | 35.0% | |
| GTTTGGATCATTCAAGAGTT+AGG | - | chr1.4:57814215-57814234 | MS.gene39903:intron | 35.0% | |
| TAACTTTGTGTGTTCTTGAC+AGG | - | chr1.4:57814946-57814965 | MS.gene39903:CDS | 35.0% | |
| TAGGTAACCATTAGCATAGT+AGG | + | chr1.4:57815685-57815704 | None:intergenic | 35.0% | |
| TTGTCTAAGAAAGCAGTTTG+AGG | + | chr1.4:57814271-57814290 | None:intergenic | 35.0% | |
| ! | AGTTCCTGAACTGAATTTTG+AGG | + | chr1.4:57814361-57814380 | None:intergenic | 35.0% |
| !! | CTGAACTGAATTTTGAGGAT+AGG | + | chr1.4:57814356-57814375 | None:intergenic | 35.0% |
| !! | CTTGATTTTGTTTCTTCAGG+GGG | - | chr1.4:57815593-57815612 | MS.gene39903:CDS | 35.0% |
| !! | CTTTGGAATTGAGTTCAAAC+GGG | - | chr1.4:57814422-57814441 | MS.gene39903:intron | 35.0% |
| !!! | AGTGAACATTTTTGGTGTGA+TGG | + | chr1.4:57814321-57814340 | None:intergenic | 35.0% |
| AAAACGGTTGGACATACCTA+GGG | + | chr1.4:57815091-57815110 | None:intergenic | 40.0% | |
| AAAATTAAGGCTTATGCCGC+TGG | + | chr1.4:57814620-57814639 | None:intergenic | 40.0% | |
| AAACTGGTGAAGCTGTGAAT+AGG | - | chr1.4:57814164-57814183 | MS.gene39903:CDS | 40.0% | |
| AAGAGGAAATGTTCTGCTAG+AGG | - | chr1.4:57814787-57814806 | MS.gene39903:CDS | 40.0% | |
| AAGCTGAAATGATGTTCCGA+AGG | - | chr1.4:57814590-57814609 | MS.gene39903:intron | 40.0% | |
| AATGCCATTGCTCAAAGAAG+AGG | - | chr1.4:57814845-57814864 | MS.gene39903:intron | 40.0% | |
| ATCAGAATTCACAGCACAAG+AGG | - | chr1.4:57814770-57814789 | MS.gene39903:CDS | 40.0% | |
| ATTTCCTCCTTGAGCATAGA+CGG | - | chr1.4:57814688-57814707 | MS.gene39903:intron | 40.0% | |
| CAAGGGATCAAGTTCATCAT+AGG | - | chr1.4:57814128-57814147 | MS.gene39903:CDS | 40.0% | |
| GATTACTCATGGAGGAAGTA+CGG | - | chr1.4:57815038-57815057 | MS.gene39903:CDS | 40.0% | |
| GGAAGTTCCTTCCATTTGAT+TGG | - | chr1.4:57814730-57814749 | MS.gene39903:CDS | 40.0% | |
| TCCATGAGTAATCATCAGGA+GGG | + | chr1.4:57815031-57815050 | None:intergenic | 40.0% | |
| TGTGTCTTTGCTTCATGGTT+TGG | - | chr1.4:57814198-57814217 | MS.gene39903:intron | 40.0% | |
| TTCCTCCATGAGTAATCATC+AGG | + | chr1.4:57815035-57815054 | None:intergenic | 40.0% | |
| TTCTCTTGGAAACCCTTCTT+TGG | - | chr1.4:57814405-57814424 | MS.gene39903:intron | 40.0% | |
| ! | ATTACTCATGGAGGAAGTAC+GGG | - | chr1.4:57815039-57815058 | MS.gene39903:CDS | 40.0% |
| ! | TGATTGATGTACTAGCCTGT+GGG | - | chr1.4:57815277-57815296 | MS.gene39903:CDS | 40.0% |
| !! | TTGATGCAACTTGTTGAGCA+AGG | + | chr1.4:57814462-57814481 | None:intergenic | 40.0% |
| AGATCGGAGCTCCAATCAAA+TGG | + | chr1.4:57814744-57814763 | None:intergenic | 45.0% | |
| ATGTTCTGCTAGAGGTGATG+AGG | - | chr1.4:57814795-57814814 | MS.gene39903:CDS | 45.0% | |
| CAAAACGGTTGGACATACCT+AGG | + | chr1.4:57815092-57815111 | None:intergenic | 45.0% | |
| CACCAACAATGTCGTCTACT+AGG | - | chr1.4:57814659-57814678 | MS.gene39903:intron | 45.0% | |
| CATGCATTTGCAGGTTGTGT+TGG | + | chr1.4:57815736-57815755 | None:intergenic | 45.0% | |
| CTCCATGAGTAATCATCAGG+AGG | + | chr1.4:57815032-57815051 | None:intergenic | 45.0% | |
| CTCCTGATGATTACTCATGG+AGG | - | chr1.4:57815030-57815049 | MS.gene39903:CDS | 45.0% | |
| GAAGGGTTTCCAAGAGAAAG+TGG | + | chr1.4:57814403-57814422 | None:intergenic | 45.0% | |
| GACCTAGTAGACGACATTGT+TGG | + | chr1.4:57814664-57814683 | None:intergenic | 45.0% | |
| GGATGAGCCTACTATGCTAA+TGG | - | chr1.4:57815675-57815694 | MS.gene39903:CDS | 45.0% | |
| GTGATTATGCTCGCCTTCAT+AGG | + | chr1.4:57815704-57815723 | None:intergenic | 45.0% | |
| TATAAGTGCAGCAGCATGAG+AGG | - | chr1.4:57815619-57815638 | MS.gene39903:CDS | 45.0% | |
| TCCCTCCTGATGATTACTCA+TGG | - | chr1.4:57815027-57815046 | MS.gene39903:CDS | 45.0% | |
| TCTCAACATGCTTCCTAGCA+GGG | + | chr1.4:57815648-57815667 | None:intergenic | 45.0% | |
| TGCTATCAGCAACAAGCTTG+CGG | - | chr1.4:57815001-57815020 | MS.gene39903:CDS | 45.0% | |
| TGTTCTGCTAGAGGTGATGA+GGG | - | chr1.4:57814796-57814815 | MS.gene39903:CDS | 45.0% | |
| ! | ACTTGTTGAGCAAGGTGAAG+CGG | + | chr1.4:57814454-57814473 | None:intergenic | 45.0% |
| ! | CTGATTGATGTACTAGCCTG+TGG | - | chr1.4:57815276-57815295 | MS.gene39903:CDS | 45.0% |
| ! | GATTGATGTACTAGCCTGTG+GGG | - | chr1.4:57815278-57815297 | MS.gene39903:CDS | 45.0% |
| AACAGCAGCTGCAGCAACAA+AGG | - | chr1.4:57814524-57814543 | MS.gene39903:intron | 50.0% | |
| ATGTTCCGAAGGAACACCAG+CGG | - | chr1.4:57814601-57814620 | MS.gene39903:intron | 50.0% | |
| CGGAGCTCCAATCAAATGGA+AGG | + | chr1.4:57814740-57814759 | None:intergenic | 50.0% | |
| CTCTCAACATGCTTCCTAGC+AGG | + | chr1.4:57815649-57815668 | None:intergenic | 50.0% | |
| TACGGGCAGAAGCCTATCAA+GGG | - | chr1.4:57815056-57815075 | MS.gene39903:CDS | 50.0% | |
| TTATGCCGCTGGTGTTCCTT+CGG | + | chr1.4:57814609-57814628 | None:intergenic | 50.0% | |
| TTTGTTGCTGCAGCTGCTGT+TGG | + | chr1.4:57814525-57814544 | None:intergenic | 50.0% | |
| ! | CTGCTAGGAAGCATGTTGAG+AGG | - | chr1.4:57815647-57815666 | MS.gene39903:CDS | 50.0% |
| ! | TGCAGGTTGTGTTGGTACCT+TGG | + | chr1.4:57815728-57815747 | None:intergenic | 50.0% |
| ! | TGGTGATGATGCTGTTGCTG+CGG | + | chr1.4:57814505-57814524 | None:intergenic | 50.0% |
| !! | GAAGCATGTTGAGAGGTGCT+TGG | - | chr1.4:57815654-57815673 | MS.gene39903:CDS | 50.0% |
| !! | GCAAGCTTGTTGCTGATAGC+AGG | + | chr1.4:57815002-57815021 | None:intergenic | 50.0% |
| AGGCGAGCATAATCACGCCA+AGG | - | chr1.4:57815708-57815727 | MS.gene39903:CDS | 55.0% | |
| CACGCTTCCGTCTATGCTCA+AGG | + | chr1.4:57814698-57814717 | None:intergenic | 55.0% | |
| CTTGAGCATAGACGGAAGCG+TGG | - | chr1.4:57814696-57814715 | MS.gene39903:intron | 55.0% | |
| GCTTCCGTCTATGCTCAAGG+AGG | + | chr1.4:57814695-57814714 | None:intergenic | 55.0% | |
| GGTTGGACATACCTAGGGTG+AGG | + | chr1.4:57815086-57815105 | None:intergenic | 55.0% | |
| GTACGGGCAGAAGCCTATCA+AGG | - | chr1.4:57815055-57815074 | MS.gene39903:CDS | 55.0% | |
| GGGTGAGGAGAGCCCTTGAT+AGG | + | chr1.4:57815071-57815090 | None:intergenic | 60.0% | |
| TCAAGGGCTCTCCTCACCCT+AGG | - | chr1.4:57815072-57815091 | MS.gene39903:CDS | 60.0% | |
| ! | AGACGGAAGCGTGGCTAACG+TGG | - | chr1.4:57814705-57814724 | MS.gene39903:intron | 60.0% |
| ! | GGAAGCGTGGCTAACGTGGA+TGG | - | chr1.4:57814709-57814728 | MS.gene39903:intron | 60.0% |
| GCATGAGAGGCTGCCCTGCT+AGG | - | chr1.4:57815632-57815651 | MS.gene39903:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 57814055 | 57815756 | 57814055 | ID=MS.gene39903 |
| chr1.4 | mRNA | 57814055 | 57815756 | 57814055 | ID=MS.gene39903.t1;Parent=MS.gene39903 |
| chr1.4 | exon | 57814945 | 57815756 | 57814945 | ID=MS.gene39903.t1.exon1;Parent=MS.gene39903.t1 |
| chr1.4 | CDS | 57814945 | 57815756 | 57814945 | ID=cds.MS.gene39903.t1;Parent=MS.gene39903.t1 |
| chr1.4 | exon | 57814718 | 57814843 | 57814718 | ID=MS.gene39903.t1.exon2;Parent=MS.gene39903.t1 |
| chr1.4 | CDS | 57814718 | 57814843 | 57814718 | ID=cds.MS.gene39903.t1;Parent=MS.gene39903.t1 |
| chr1.4 | exon | 57814055 | 57814199 | 57814055 | ID=MS.gene39903.t1.exon3;Parent=MS.gene39903.t1 |
| chr1.4 | CDS | 57814055 | 57814199 | 57814055 | ID=cds.MS.gene39903.t1;Parent=MS.gene39903.t1 |
| Gene Sequence |
| Protein sequence |
