AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene40095

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40095.t1 MTR_4g092880 86.128 483 33 5 1 461 1 471 0.0 815
MS.gene40095.t1 MTR_4g092900 77.593 540 69 7 1 497 1 531 0.0 743
MS.gene40095.t1 MTR_4g092900 76.295 502 67 7 1 459 1 493 0.0 741
MS.gene40095.t1 MTR_4g092880 89.944 358 30 3 1 354 1 356 0.0 641
MS.gene40095.t1 MTR_2g091130 40.000 255 114 6 144 383 293 523 1.38e-43 164
MS.gene40095.t1 MTR_2g091135 38.039 255 119 6 144 383 304 534 1.18e-40 155
MS.gene40095.t1 MTR_3g075040 30.324 432 218 15 68 453 94 488 5.42e-39 150
MS.gene40095.t1 MTR_3g075040 29.176 449 201 16 68 453 94 488 2.56e-38 149
MS.gene40095.t1 MTR_4g079650 39.834 241 90 9 148 366 656 863 1.99e-36 144
MS.gene40095.t1 MTR_2g091135 34.078 358 172 9 144 482 304 616 3.96e-36 142
MS.gene40095.t1 MTR_4g079650 37.634 279 119 10 118 387 625 857 1.28e-35 142
MS.gene40095.t1 MTR_4g079650 37.634 279 119 10 118 387 625 857 1.92e-35 141
MS.gene40095.t1 MTR_0018s0090 49.524 105 53 0 148 252 198 302 2.82e-26 113
MS.gene40095.t1 MTR_2g018270 40.606 165 89 3 101 260 29 189 2.84e-26 112
MS.gene40095.t1 MTR_0018s0090 49.524 105 53 0 148 252 198 302 2.97e-26 113
MS.gene40095.t1 MTR_8g070660 34.483 174 106 4 78 243 19 192 9.87e-22 95.5
MS.gene40095.t1 MTR_8g070660 34.483 174 106 4 78 243 19 192 1.61e-21 96.7
MS.gene40095.t1 MTR_6g033375 37.500 120 68 2 129 245 54 169 1.46e-15 78.6
MS.gene40095.t1 MTR_5g069490 45.349 86 44 2 160 242 111 196 2.73e-12 68.6
MS.gene40095.t1 MTR_2g437920 42.353 85 46 2 162 243 146 230 5.72e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene40095.t1 AT5G65630 40.273 293 145 6 1 268 1 288 2.76e-49 179
MS.gene40095.t1 AT5G10550 37.589 282 145 5 1 253 1 280 4.86e-42 159
MS.gene40095.t1 AT1G73150 34.036 332 188 9 64 383 44 356 7.95e-41 153
MS.gene40095.t1 AT1G73150 34.036 332 188 9 64 383 44 356 8.18e-41 152
MS.gene40095.t1 AT1G06230 36.653 251 129 5 147 383 421 655 7.05e-35 139
MS.gene40095.t1 AT1G06230 36.653 251 129 5 147 383 421 655 7.05e-35 139
MS.gene40095.t1 AT1G06230 36.653 251 129 5 147 383 421 655 7.05e-35 139
MS.gene40095.t1 AT1G06230 36.653 251 129 5 147 383 421 655 7.05e-35 139
MS.gene40095.t1 AT5G63320 29.343 426 215 16 70 453 60 441 1.05e-32 130
MS.gene40095.t1 AT5G63320 29.343 426 215 16 70 453 60 441 1.05e-32 130
MS.gene40095.t1 AT5G14270 28.341 434 218 14 73 469 54 431 1.12e-31 129
MS.gene40095.t1 AT5G14270 28.341 434 218 14 73 469 54 431 1.12e-31 129
MS.gene40095.t1 AT5G14270 28.341 434 218 14 73 469 54 431 1.14e-31 129
MS.gene40095.t1 AT5G63320 29.343 426 215 16 70 453 60 441 1.28e-31 130
MS.gene40095.t1 AT3G27260 32.542 295 160 8 146 435 175 435 3.34e-27 116
MS.gene40095.t1 AT3G27260 32.542 295 160 8 146 435 175 435 4.00e-27 116
MS.gene40095.t1 AT3G27260 32.542 295 160 8 146 435 175 435 4.38e-27 116
MS.gene40095.t1 AT3G01770 37.436 195 108 3 69 251 41 233 5.77e-27 114
MS.gene40095.t1 AT3G27260 32.542 295 160 8 146 435 126 386 6.90e-27 115
MS.gene40095.t1 AT3G01770 37.436 195 108 3 69 251 41 233 2.06e-26 113
MS.gene40095.t1 AT5G46550 42.017 119 61 1 151 269 73 183 1.04e-21 98.6
MS.gene40095.t1 AT2G34900 40.517 116 66 1 148 260 1 116 1.37e-19 89.4
MS.gene40095.t1 AT2G34900 38.281 128 76 1 148 272 111 238 2.41e-19 90.5
MS.gene40095.t1 AT3G52280 41.414 99 55 2 148 243 95 193 3.54e-16 80.5
MS.gene40095.t1 AT3G52280 41.414 99 55 2 148 243 112 210 5.91e-16 80.1

Find 167 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATTCATTTCCCTCTTATT+TGG 0.124253 4.3:+21326078 None:intergenic
GATTGATTCCTCTTGAATTT+AGG 0.145522 4.3:+21326993 None:intergenic
CTTTGGCTTGGGCTGCTTCA+AGG 0.153065 4.3:+21326110 None:intergenic
CCTCTGTGCTGCGGCCAATT+TGG 0.158354 4.3:+21327074 None:intergenic
CTTCATGCAGATTCGGATTC+AGG 0.197155 4.3:-21325392 MS.gene40095:intron
ATTGATTCCTCTTGAATTTA+GGG 0.241569 4.3:+21326994 None:intergenic
CTTTCCCTCTCCATTTCAAC+AGG 0.271083 4.3:+21326306 None:intergenic
TTTGGCTTGGGCTGCTTCAA+GGG 0.275197 4.3:+21326111 None:intergenic
TCCAGTGGTTCCAGCAGCTC+TGG 0.278947 4.3:-21325507 MS.gene40095:CDS
TTCTTGTTCGCCGATTTCTT+AGG 0.308644 4.3:+21326753 None:intergenic
GGATCCCTGGCCTTTGGCTT+GGG 0.322222 4.3:+21326099 None:intergenic
TTCCCTCTTATTTGGATCCC+TGG 0.326630 4.3:+21326086 None:intergenic
TGGATCCCTGGCCTTTGGCT+TGG 0.328127 4.3:+21326098 None:intergenic
GCATCAACCTTCTCCCTATC+AGG 0.335506 4.3:+21325684 None:intergenic
TTCATTACGGTTGGCTAATA+CGG 0.338892 4.3:+21327097 None:intergenic
TCGGATTCAGGGAGTTCTTC+AGG 0.341320 4.3:-21325380 MS.gene40095:CDS
TTATTTGGATCCCTGGCCTT+TGG 0.344705 4.3:+21326093 None:intergenic
ACCCCATTGCCTTTGTTTGA+AGG 0.345351 4.3:+21325818 None:intergenic
GGCTGCTTCAAGGGGTTCAC+TGG 0.352749 4.3:+21326120 None:intergenic
CAGGCTCAGGCATTGGGTCT+TGG 0.357061 4.3:+21326226 None:intergenic
TCACTGGAAGTGCTCGCGTT+GGG 0.357363 4.3:+21326136 None:intergenic
TCATCAAATTTCTCATGTAT+TGG 0.357530 4.3:+21326369 None:intergenic
TCTTGTTCGCCGATTTCTTA+GGG 0.361046 4.3:+21326754 None:intergenic
ACTGCGGCGACGCAGCTTCT+TGG 0.367305 4.3:-21326414 MS.gene40095:CDS
TTCCTCTTGAATTTAGGGTT+AGG 0.374734 4.3:+21326999 None:intergenic
TACTAGCAGGCTCAGGCATT+GGG 0.374883 4.3:+21326220 None:intergenic
AATTAAGCATCATATGGATC+TGG 0.376502 4.3:-21326556 MS.gene40095:CDS
GATTAAGCGGCAGGCGCTAA+TGG 0.380098 4.3:-21325855 MS.gene40095:CDS
AGCGGTGGTGGGATTGGAAT+TGG 0.383028 4.3:+21326258 None:intergenic
CTCCAGACACGAATTGAATC+AGG 0.384755 4.3:-21326816 MS.gene40095:CDS
TGATATAATTAAGCATCATA+TGG 0.385015 4.3:-21326562 MS.gene40095:CDS
TTCTGTTTGTTTCCCTCAGA+AGG 0.387137 4.3:+21325654 None:intergenic
TCATGAAGATTCAAAGCAAC+CGG 0.391505 4.3:+21326591 None:intergenic
TTCAAAGCAACCGGGTCAAC+CGG 0.394477 4.3:+21326600 None:intergenic
GCGGCCAATTTGGTTCATTA+CGG 0.397003 4.3:+21327084 None:intergenic
AGGCGGTGGAGCCGGATTCA+TGG 0.397297 4.3:-21327054 MS.gene40095:CDS
CCAACCGTAATGAACCAAAT+TGG 0.399415 4.3:-21327088 MS.gene40095:CDS
TCCTCTTGAATTTAGGGTTA+GGG 0.399467 4.3:+21327000 None:intergenic
CTCGTGGAACCCTGTTGAAA+TGG 0.407921 4.3:-21326316 MS.gene40095:CDS
TTTGCTAGCGGTGGTGGGAT+TGG 0.412620 4.3:+21326252 None:intergenic
AAGGAAGAGAAATGGGCATT+TGG 0.415759 4.3:-21325980 MS.gene40095:CDS
ACCGCCGTTGTGGCTTGACC+TGG 0.415959 4.3:+21326782 None:intergenic
GTTGGGGAGGGTGTGCGAAC+TGG 0.416907 4.3:+21326153 None:intergenic
TGCCTTCAAACAAAGGCAAT+GGG 0.422340 4.3:-21325820 MS.gene40095:CDS
TGGCCGCAGCACAGAGGCGG+TGG 0.432117 4.3:-21327068 MS.gene40095:CDS
GGATGAGATTGAGCTTGATA+TGG 0.436408 4.3:-21325947 MS.gene40095:CDS
CAGCACAGAGGCGGTGGAGC+CGG 0.437003 4.3:-21327062 MS.gene40095:CDS
GATCTCTTATCCGCCGGAAA+AGG 0.437801 4.3:+21326711 None:intergenic
CATATCACAAGGAAGAGAAA+TGG 0.438477 4.3:-21325988 MS.gene40095:CDS
CCCCTGATTCAATTCGTGTC+TGG 0.439661 4.3:+21326814 None:intergenic
ATTTACAGGAATTGCCTGAT+AGG 0.443388 4.3:-21325698 MS.gene40095:intron
CCCAGAGCTGCTGGAACCAC+TGG 0.444706 4.3:+21325506 None:intergenic
CGGAAAAGGTCGCTTATTGC+CGG 0.454158 4.3:+21326725 None:intergenic
ACAGGTGGGAAATCGTTTGC+TGG 0.455112 4.3:+21325585 None:intergenic
GATAAAGATATGAGTGGTAC+TGG 0.457040 4.3:-21325549 MS.gene40095:CDS
ATGGGCATTTGGAGCAAGAT+GGG 0.463782 4.3:-21325969 MS.gene40095:CDS
TCAGGAAGTGATTCTGAAGC+TGG 0.466135 4.3:-21325362 MS.gene40095:CDS
GTACTAGCAGGCTCAGGCAT+TGG 0.466843 4.3:+21326219 None:intergenic
CCAATTTGGTTCATTACGGT+TGG 0.468622 4.3:+21327088 None:intergenic
AAATGGAGAGGGAAAGGAAG+AGG 0.468775 4.3:-21326299 MS.gene40095:CDS
TGGGAATGGCTACTTGGATT+GGG 0.470358 4.3:-21325072 MS.gene40095:CDS
TGGAAGTGCTCGCGTTGGGG+AGG 0.470516 4.3:+21326140 None:intergenic
GTGGGAATGGCTACTTGGAT+TGG 0.472291 4.3:-21325073 MS.gene40095:CDS
TTCATGCAGATTCGGATTCA+GGG 0.475639 4.3:-21325391 MS.gene40095:intron
GGAATCACTCCCAGAGCTGC+TGG 0.477857 4.3:+21325497 None:intergenic
AGCAGCCCAAGCCAAAGGCC+AGG 0.478818 4.3:-21326104 MS.gene40095:CDS
ACTACTTGTTCCATCTTCTC+TGG 0.479306 4.3:+21326012 None:intergenic
GGCGGTGGAGCCGGATTCAT+GGG 0.479789 4.3:-21327053 MS.gene40095:CDS
ATATCACAAGGAAGAGAAAT+GGG 0.480591 4.3:-21325987 MS.gene40095:CDS
TTCACTGGAAGTGCTCGCGT+TGG 0.481362 4.3:+21326135 None:intergenic
AGGCCAGGGATCCAAATAAG+AGG 0.482051 4.3:-21326089 MS.gene40095:CDS
GATTTAGCCGCCAGAGAAGA+TGG 0.483057 4.3:-21326022 MS.gene40095:intron
GTTTGTTTCCCTCAGAAGGA+GGG 0.485872 4.3:+21325658 None:intergenic
GACTTTGATCTCTTATCCGC+CGG 0.488228 4.3:+21326705 None:intergenic
TTGGCTTGGGCTGCTTCAAG+GGG 0.493589 4.3:+21326112 None:intergenic
AAGAGATCAAAGTCAGAGGT+TGG 0.496583 4.3:-21326696 MS.gene40095:CDS
GGGTTGTAGACATTGGTTGT+TGG 0.499591 4.3:-21325103 MS.gene40095:CDS
GCAGCCCAAGCCAAAGGCCA+GGG 0.500330 4.3:-21326103 MS.gene40095:CDS
CCAGTGGTTCCAGCAGCTCT+GGG 0.500740 4.3:-21325506 MS.gene40095:CDS
TCAGCGTGGGAATGGCTACT+TGG 0.501363 4.3:-21325078 MS.gene40095:CDS
TGTTTGTTTCCCTCAGAAGG+AGG 0.503202 4.3:+21325657 None:intergenic
TTGATGAGGATGTTGACATC+GGG 0.505049 4.3:-21325617 MS.gene40095:CDS
ATGACGCTTCTTCAATCAAC+CGG 0.505174 4.3:-21326962 MS.gene40095:CDS
GCAGCTTCTTGGAAAATTCG+AGG 0.505937 4.3:-21326403 MS.gene40095:CDS
TTGGTTGTTGGTTTCAGCGT+GGG 0.506673 4.3:-21325091 MS.gene40095:CDS
GGAAGTGCTCGCGTTGGGGA+GGG 0.508512 4.3:+21326141 None:intergenic
TTTGTTTCCCTCAGAAGGAG+GGG 0.511688 4.3:+21325659 None:intergenic
TGTTGGTTTCAGCGTGGGAA+TGG 0.513670 4.3:-21325086 MS.gene40095:CDS
AGGGATTTGAAGTGCTTGGC+TGG 0.513696 4.3:+21326190 None:intergenic
AGAGGTTGGAAGCGCGATGA+AGG 0.513880 4.3:-21326682 MS.gene40095:CDS
AATGAGGGATTTGAAGTGCT+TGG 0.514310 4.3:+21326186 None:intergenic
TTATCTTGCTCAATCTCCAC+AGG 0.515091 4.3:+21325567 None:intergenic
AGGTACTTTACCCATGAATC+CGG 0.515716 4.3:+21327043 None:intergenic
GGTGAGCAAGATTAAGCGGC+AGG 0.516928 4.3:-21325864 MS.gene40095:CDS
TTTACAGGAATTGCCTGATA+GGG 0.522059 4.3:-21325697 MS.gene40095:intron
AATGGGCATTTGGAGCAAGA+TGG 0.522107 4.3:-21325970 MS.gene40095:CDS
GTGCCTTCAAACAAAGGCAA+TGG 0.528594 4.3:-21325821 MS.gene40095:CDS
AACTGGTGATTGCGCTAATG+AGG 0.537882 4.3:+21326170 None:intergenic
CTTGTTCGCCGATTTCTTAG+GGG 0.538317 4.3:+21326755 None:intergenic
AGGTCAAGCCACAACGGCGG+TGG 0.538999 4.3:-21326780 MS.gene40095:CDS
AATGGAGAGGGAAAGGAAGA+GGG 0.540869 4.3:-21326298 MS.gene40095:CDS
ATTAAGCATCATATGGATCT+GGG 0.541633 4.3:-21326555 MS.gene40095:CDS
TAAGAATGCTTACGCTATGC+CGG 0.543156 4.3:-21326511 MS.gene40095:CDS
CACTGGAAGTGCTCGCGTTG+GGG 0.543223 4.3:+21326137 None:intergenic
ATTACGGTTGGCTAATACGG+CGG 0.551518 4.3:+21327100 None:intergenic
TTGTTCGCCGATTTCTTAGG+GGG 0.552954 4.3:+21326756 None:intergenic
GTTCAAGCTCCGTTACGAAA+CGG 0.555887 4.3:+21326850 None:intergenic
TGATGAAAACCAAAATAGCT+TGG 0.555909 4.3:-21326635 MS.gene40095:CDS
TGATGCAACCCCTCCTTCTG+AGG 0.557199 4.3:-21325667 MS.gene40095:CDS
AATAATGTGCCTTCAAACAA+AGG 0.557916 4.3:-21325827 MS.gene40095:CDS
GCTTAGAAACCGTTTCGTAA+CGG 0.559339 4.3:-21326859 MS.gene40095:CDS
ATGATTCGTGACTACATCGT+TGG 0.560937 4.3:+21326935 None:intergenic
GGCTGGTTAGAAGTACTAGC+AGG 0.564980 4.3:+21326207 None:intergenic
AATCAGGGGAATTAAAATCC+AGG 0.565470 4.3:-21326800 MS.gene40095:CDS
TCTTGCTCAATCTCCACAGG+TGG 0.571533 4.3:+21325570 None:intergenic
ACCCTAACCCTAAATTCAAG+AGG 0.575391 4.3:-21327001 MS.gene40095:CDS
AGTGTTAACATCATGGCCCT+TGG 0.577015 4.3:+21326434 None:intergenic
TTAGAAGTACTAGCAGGCTC+AGG 0.577909 4.3:+21326213 None:intergenic
ATTGAAGAAGCGTCATCTGA+AGG 0.578743 4.3:+21326969 None:intergenic
CTGTTGAAATGGAGAGGGAA+AGG 0.579064 4.3:-21326305 MS.gene40095:CDS
ATGAATTACATGCTAGCTCG+TGG 0.580764 4.3:-21326332 MS.gene40095:CDS
AGCAAACGATTTCCCACCTG+TGG 0.582684 4.3:-21325583 MS.gene40095:CDS
CTTGAAGCAGCCCAAGCCAA+AGG 0.585250 4.3:-21326109 MS.gene40095:CDS
TCGCCGCAGTGTTAACATCA+TGG 0.585979 4.3:+21326427 None:intergenic
TCCAGACACGAATTGAATCA+GGG 0.587937 4.3:-21326815 MS.gene40095:CDS
AGTGATTCTGAAGCTGGCAA+TGG 0.592321 4.3:-21325356 MS.gene40095:intron
GAAGATAGATGATGTTGATG+AGG 0.592779 4.3:-21325631 MS.gene40095:CDS
TTAGTGTTAGTGTTAGCGTA+AGG 0.596112 4.3:+21327023 None:intergenic
TTTCCCTCTCCATTTCAACA+GGG 0.597378 4.3:+21326307 None:intergenic
TGACTACATCGTTGGAACGC+CGG 0.602092 4.3:+21326943 None:intergenic
TGCATTGACATACAATACCA+AGG 0.605707 4.3:-21326451 MS.gene40095:CDS
GATGCAACCCCTCCTTCTGA+GGG 0.606162 4.3:-21325666 MS.gene40095:CDS
AAGCAACCGGGTCAACCGGA+TGG 0.608610 4.3:+21326604 None:intergenic
AATTGGCCGCAGCACAGAGG+CGG 0.608820 4.3:-21327071 MS.gene40095:CDS
GGCCAGGGATCCAAATAAGA+GGG 0.609397 4.3:-21326088 MS.gene40095:CDS
ACTGGTGATTGCGCTAATGA+GGG 0.610863 4.3:+21326171 None:intergenic
ACTTGTTCCATCTTCTCTGG+CGG 0.614330 4.3:+21326015 None:intergenic
GGAATTGCCTGATAGGGAGA+AGG 0.617711 4.3:-21325691 MS.gene40095:CDS
ACATCATCAGCAAAATCCAC+CGG 0.621597 4.3:+21326492 None:intergenic
GGAACCCTGTTGAAATGGAG+AGG 0.623793 4.3:-21326311 MS.gene40095:CDS
TGTGTCAGTAGTAGTTCCAG+TGG 0.625768 4.3:-21325522 MS.gene40095:CDS
GGGAGTGATTCCTCGTCGAG+TGG 0.628680 4.3:-21325486 MS.gene40095:intron
AGATGGTGAGCAAGATTAAG+CGG 0.630774 4.3:-21325868 MS.gene40095:CDS
GAATGCTTACGCTATGCCGG+TGG 0.637827 4.3:-21326508 MS.gene40095:CDS
GCTCCACCGCCTCTGTGCTG+CGG 0.641006 4.3:+21327065 None:intergenic
GAACCCTGTTGAAATGGAGA+GGG 0.643558 4.3:-21326310 MS.gene40095:CDS
CATGAAGATTCAAAGCAACC+GGG 0.644010 4.3:+21326592 None:intergenic
CCAAATTGGCCGCAGCACAG+AGG 0.645953 4.3:-21327074 MS.gene40095:CDS
GTAACAGGGGTTGTAGACAT+TGG 0.646173 4.3:-21325110 MS.gene40095:intron
GGAAGCGCGATGAAGGCTTG+TGG 0.651861 4.3:-21326675 MS.gene40095:CDS
CTTGCTCAATCTCCACAGGT+GGG 0.652511 4.3:+21325571 None:intergenic
TGGGCATTTGGAGCAAGATG+GGG 0.655326 4.3:-21325968 MS.gene40095:CDS
GAGCAAGATAAAGATATGAG+TGG 0.661911 4.3:-21325555 MS.gene40095:CDS
TGAGATTGAGCTTGATATGG+AGG 0.664012 4.3:-21325944 MS.gene40095:CDS
GCATTGACATACAATACCAA+GGG 0.665978 4.3:-21326450 MS.gene40095:CDS
GTTGATGAGGATGTTGACAT+CGG 0.672168 4.3:-21325618 MS.gene40095:CDS
AAATCCAGGTCAAGCCACAA+CGG 0.673879 4.3:-21326786 MS.gene40095:CDS
CCAGACACGAATTGAATCAG+GGG 0.683125 4.3:-21326814 MS.gene40095:CDS
AACAAGTAGTACATATCACA+AGG 0.684980 4.3:-21325999 MS.gene40095:CDS
GGATAAGAGATCAAAGTCAG+AGG 0.686019 4.3:-21326700 MS.gene40095:CDS
TCCAGGTCAAGCCACAACGG+CGG 0.697704 4.3:-21326783 MS.gene40095:CDS
GCCTTCAAACAAAGGCAATG+GGG 0.698333 4.3:-21325819 MS.gene40095:intron
ATTGGTTGTTGGTTTCAGCG+TGG 0.700847 4.3:-21325092 MS.gene40095:CDS
AAAGATATGAGTGGTACTGG+TGG 0.720299 4.3:-21325546 MS.gene40095:CDS
AGAGGTTATACCACTCGACG+AGG 0.738536 4.3:+21325476 None:intergenic
GGGCCATGATGTTAACACTG+CGG 0.770423 4.3:-21326430 MS.gene40095:CDS
TGATGAGGATGTTGACATCG+GGG 0.788370 4.3:-21325616 MS.gene40095:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAATAAAAAATGGACAATA+AGG + chr4.3:21326387-21326406 None:intergenic 20.0%
!! TCATTCAACAGAATAAAAAA+TGG + chr4.3:21326396-21326415 None:intergenic 20.0%
!! TGATATAATTAAGCATCATA+TGG - chr4.3:21325612-21325631 MS.gene40095:CDS 20.0%
! ACAATCATGATAAATTTAGC+CGG + chr4.3:21327031-21327050 None:intergenic 25.0%
! TCATCAAATTTCTCATGTAT+TGG + chr4.3:21325808-21325827 None:intergenic 25.0%
!! ATTGATTCCTCTTGAATTTA+GGG + chr4.3:21325183-21325202 None:intergenic 25.0%
!!! TCTTTAAACTTGTTGTAACA+GGG - chr4.3:21327050-21327069 MS.gene40095:CDS 25.0%
AACAAGTAGTACATATCACA+AGG - chr4.3:21326175-21326194 MS.gene40095:CDS 30.0%
AATAATGTGCCTTCAAACAA+AGG - chr4.3:21326347-21326366 MS.gene40095:CDS 30.0%
AATTAAGCATCATATGGATC+TGG - chr4.3:21325618-21325637 MS.gene40095:CDS 30.0%
ACATTCATTTCCCTCTTATT+TGG + chr4.3:21326099-21326118 None:intergenic 30.0%
ATATCACAAGGAAGAGAAAT+GGG - chr4.3:21326187-21326206 MS.gene40095:CDS 30.0%
ATTAAGCATCATATGGATCT+GGG - chr4.3:21325619-21325638 MS.gene40095:CDS 30.0%
GTTGAGGAAAAACATAAGTT+GGG - chr4.3:21326117-21326136 MS.gene40095:CDS 30.0%
TGATGAAAACCAAAATAGCT+TGG - chr4.3:21325539-21325558 MS.gene40095:CDS 30.0%
TGTTGAGGAAAAACATAAGT+TGG - chr4.3:21326116-21326135 MS.gene40095:CDS 30.0%
! AAAAACATAAGTTGGGACTA+GGG - chr4.3:21326124-21326143 MS.gene40095:CDS 30.0%
! GATTGATTCCTCTTGAATTT+AGG + chr4.3:21325184-21325203 None:intergenic 30.0%
! GCTAAAAATCCAAGCTATTT+TGG + chr4.3:21325551-21325570 None:intergenic 30.0%
! TTTTGATCTTCATGCAGATT+CGG - chr4.3:21326775-21326794 MS.gene40095:CDS 30.0%
!! AATTTGTTGTGTGCATTTAC+AGG - chr4.3:21326462-21326481 MS.gene40095:CDS 30.0%
!! CTTTAAACTTGTTGTAACAG+GGG - chr4.3:21327051-21327070 MS.gene40095:CDS 30.0%
!! GTCTTTAAACTTGTTGTAAC+AGG - chr4.3:21327049-21327068 MS.gene40095:CDS 30.0%
!! TTGTACTCTGAAATCATCAT+GGG - chr4.3:21326740-21326759 MS.gene40095:CDS 30.0%
!! TTTGTACTCTGAAATCATCA+TGG - chr4.3:21326739-21326758 MS.gene40095:CDS 30.0%
!!! GTACATTTTTTACTCTGCTA+TGG - chr4.3:21326980-21326999 MS.gene40095:CDS 30.0%
AATCAGGGGAATTAAAATCC+AGG - chr4.3:21325374-21325393 MS.gene40095:CDS 35.0%
ATTTACAGGAATTGCCTGAT+AGG - chr4.3:21326476-21326495 MS.gene40095:CDS 35.0%
CATATCACAAGGAAGAGAAA+TGG - chr4.3:21326186-21326205 MS.gene40095:CDS 35.0%
CTGCATGAAGATCAAAATTG+AGG + chr4.3:21326772-21326791 None:intergenic 35.0%
GAAGATAGATGATGTTGATG+AGG - chr4.3:21326543-21326562 MS.gene40095:CDS 35.0%
GAGCAAGATAAAGATATGAG+TGG - chr4.3:21326619-21326638 MS.gene40095:CDS 35.0%
GATAAAGATATGAGTGGTAC+TGG - chr4.3:21326625-21326644 MS.gene40095:CDS 35.0%
GGTTACCAATTGGAAAAAGA+TGG - chr4.3:21326289-21326308 MS.gene40095:CDS 35.0%
GTACAAACCACAACATTTAG+AGG + chr4.3:21326726-21326745 None:intergenic 35.0%
TAAGAGGGAAATGAATGTTG+AGG - chr4.3:21326101-21326120 MS.gene40095:CDS 35.0%
TCATGAAGATTCAAAGCAAC+CGG + chr4.3:21325586-21325605 None:intergenic 35.0%
TTAGTGTTAGTGTTAGCGTA+AGG + chr4.3:21325154-21325173 None:intergenic 35.0%
TTTACAGGAATTGCCTGATA+GGG - chr4.3:21326477-21326496 MS.gene40095:CDS 35.0%
! GAAAAACATAAGTTGGGACT+AGG - chr4.3:21326123-21326142 MS.gene40095:CDS 35.0%
! GCATTGACATACAATACCAA+GGG - chr4.3:21325724-21325743 MS.gene40095:intron 35.0%
! TCCTCTTGAATTTAGGGTTA+GGG + chr4.3:21325177-21325196 None:intergenic 35.0%
! TGCATTGACATACAATACCA+AGG - chr4.3:21325723-21325742 MS.gene40095:intron 35.0%
! TTCATTACGGTTGGCTAATA+CGG + chr4.3:21325080-21325099 None:intergenic 35.0%
! TTCCTCTTGAATTTAGGGTT+AGG + chr4.3:21325178-21325197 None:intergenic 35.0%
AAGAGATCAAAGTCAGAGGT+TGG - chr4.3:21325478-21325497 MS.gene40095:intron 40.0%
AAGGAAGAGAAATGGGCATT+TGG - chr4.3:21326194-21326213 MS.gene40095:CDS 40.0%
ACATCATCAGCAAAATCCAC+CGG + chr4.3:21325685-21325704 None:intergenic 40.0%
ACCCTAACCCTAAATTCAAG+AGG - chr4.3:21325173-21325192 MS.gene40095:intron 40.0%
ACTACTTGTTCCATCTTCTC+TGG + chr4.3:21326165-21326184 None:intergenic 40.0%
AGATGGTGAGCAAGATTAAG+CGG - chr4.3:21326306-21326325 MS.gene40095:CDS 40.0%
AGGTACTTTACCCATGAATC+CGG + chr4.3:21325134-21325153 None:intergenic 40.0%
ATGAATTACATGCTAGCTCG+TGG - chr4.3:21325842-21325861 MS.gene40095:CDS 40.0%
ATGACGCTTCTTCAATCAAC+CGG - chr4.3:21325212-21325231 MS.gene40095:intron 40.0%
ATGATTCGTGACTACATCGT+TGG + chr4.3:21325242-21325261 None:intergenic 40.0%
CATGAAGATTCAAAGCAACC+GGG + chr4.3:21325585-21325604 None:intergenic 40.0%
CCAACCGTAATGAACCAAAT+TGG - chr4.3:21325086-21325105 MS.gene40095:CDS 40.0%
CCACAACATTTAGAGGAAAG+AGG + chr4.3:21326719-21326738 None:intergenic 40.0%
CCTCTTTCCTCTAAATGTTG+TGG - chr4.3:21326716-21326735 MS.gene40095:CDS 40.0%
GCTGTCTAATGTAGCATTGT+TGG - chr4.3:21326420-21326439 MS.gene40095:CDS 40.0%
GCTTAGAAACCGTTTCGTAA+CGG - chr4.3:21325315-21325334 MS.gene40095:intron 40.0%
GGATAAGAGATCAAAGTCAG+AGG - chr4.3:21325474-21325493 MS.gene40095:intron 40.0%
GGATGAGATTGAGCTTGATA+TGG - chr4.3:21326227-21326246 MS.gene40095:CDS 40.0%
TAAGAATGCTTACGCTATGC+CGG - chr4.3:21325663-21325682 MS.gene40095:CDS 40.0%
TCCAGACACGAATTGAATCA+GGG - chr4.3:21325359-21325378 MS.gene40095:CDS 40.0%
TGAGATTGAGCTTGATATGG+AGG - chr4.3:21326230-21326249 MS.gene40095:CDS 40.0%
TGCCTTCAAACAAAGGCAAT+GGG - chr4.3:21326354-21326373 MS.gene40095:CDS 40.0%
TTATCTTGCTCAATCTCCAC+AGG + chr4.3:21326610-21326629 None:intergenic 40.0%
TTCATGCAGATTCGGATTCA+GGG - chr4.3:21326783-21326802 MS.gene40095:CDS 40.0%
TTCTGTTTGTTTCCCTCAGA+AGG + chr4.3:21326523-21326542 None:intergenic 40.0%
TTGATGAGGATGTTGACATC+GGG - chr4.3:21326557-21326576 MS.gene40095:CDS 40.0%
TTTCCCTCTCCATTTCAACA+GGG + chr4.3:21325870-21325889 None:intergenic 40.0%
! AAAGATATGAGTGGTACTGG+TGG - chr4.3:21326628-21326647 MS.gene40095:CDS 40.0%
! AATGAGGGATTTGAAGTGCT+TGG + chr4.3:21325991-21326010 None:intergenic 40.0%
! CCAATTTGGTTCATTACGGT+TGG + chr4.3:21325089-21325108 None:intergenic 40.0%
! GCTCACCATCTTTTTCCAAT+TGG + chr4.3:21326297-21326316 None:intergenic 40.0%
! GTTGATGAGGATGTTGACAT+CGG - chr4.3:21326556-21326575 MS.gene40095:CDS 40.0%
! TCGATCGATTGGTTACCAAT+TGG - chr4.3:21326279-21326298 MS.gene40095:CDS 40.0%
! TGTTTTGCAGATAGCATAGC+CGG - chr4.3:21327009-21327028 MS.gene40095:CDS 40.0%
!! ATTGAAGAAGCGTCATCTGA+AGG + chr4.3:21325208-21325227 None:intergenic 40.0%
!! TCTTGTTCGCCGATTTCTTA+GGG + chr4.3:21325423-21325442 None:intergenic 40.0%
!! TGGATTTTGCTGATGATGTG+AGG - chr4.3:21325686-21325705 MS.gene40095:CDS 40.0%
!! TTCTTGTTCGCCGATTTCTT+AGG + chr4.3:21325424-21325443 None:intergenic 40.0%
!!! AGCTTGGATTTTTAGCCATC+CGG - chr4.3:21325555-21325574 MS.gene40095:CDS 40.0%
AAATCCAGGTCAAGCCACAA+CGG - chr4.3:21325388-21325407 MS.gene40095:intron 45.0%
AAATGGAGAGGGAAAGGAAG+AGG - chr4.3:21325875-21325894 MS.gene40095:intron 45.0%
AACTGGTGATTGCGCTAATG+AGG + chr4.3:21326007-21326026 None:intergenic 45.0%
AATGGAGAGGGAAAGGAAGA+GGG - chr4.3:21325876-21325895 MS.gene40095:intron 45.0%
ACTGGTGATTGCGCTAATGA+GGG + chr4.3:21326006-21326025 None:intergenic 45.0%
ACTTGTTCCATCTTCTCTGG+CGG + chr4.3:21326162-21326181 None:intergenic 45.0%
AGTGTTAACATCATGGCCCT+TGG + chr4.3:21325743-21325762 None:intergenic 45.0%
CCAGACACGAATTGAATCAG+GGG - chr4.3:21325360-21325379 MS.gene40095:CDS 45.0%
CTCCAGACACGAATTGAATC+AGG - chr4.3:21325358-21325377 MS.gene40095:CDS 45.0%
CTGTTGAAATGGAGAGGGAA+AGG - chr4.3:21325869-21325888 MS.gene40095:CDS 45.0%
CTTCATGCAGATTCGGATTC+AGG - chr4.3:21326782-21326801 MS.gene40095:CDS 45.0%
CTTTCCCTCTCCATTTCAAC+AGG + chr4.3:21325871-21325890 None:intergenic 45.0%
GAACCCTGTTGAAATGGAGA+GGG - chr4.3:21325864-21325883 MS.gene40095:CDS 45.0%
GACTTTGATCTCTTATCCGC+CGG + chr4.3:21325472-21325491 None:intergenic 45.0%
GCAGCTTCTTGGAAAATTCG+AGG - chr4.3:21325771-21325790 MS.gene40095:intron 45.0%
GCCTTCAAACAAAGGCAATG+GGG - chr4.3:21326355-21326374 MS.gene40095:CDS 45.0%
GCTATAGTGCTTGCATGTGT+TGG - chr4.3:21326926-21326945 MS.gene40095:CDS 45.0%
GGCAATGGTCATTTGTAGCA+GGG - chr4.3:21326833-21326852 MS.gene40095:CDS 45.0%
GTAACAGGGGTTGTAGACAT+TGG - chr4.3:21327064-21327083 MS.gene40095:CDS 45.0%
GTGCCTTCAAACAAAGGCAA+TGG - chr4.3:21326353-21326372 MS.gene40095:CDS 45.0%
GTTCAAGCTCCGTTACGAAA+CGG + chr4.3:21325327-21325346 None:intergenic 45.0%
GTTTGTTTCCCTCAGAAGGA+GGG + chr4.3:21326519-21326538 None:intergenic 45.0%
TGATATGGAGGCTGTTGACA+CGG - chr4.3:21326242-21326261 MS.gene40095:CDS 45.0%
TGATGAGGATGTTGACATCG+GGG - chr4.3:21326558-21326577 MS.gene40095:CDS 45.0%
TGGCAATGGTCATTTGTAGC+AGG - chr4.3:21326832-21326851 MS.gene40095:CDS 45.0%
TGGGAATGGCTACTTGGATT+GGG - chr4.3:21327102-21327121 MS.gene40095:CDS 45.0%
TGTGTCAGTAGTAGTTCCAG+TGG - chr4.3:21326652-21326671 MS.gene40095:CDS 45.0%
TGTTTGTTTCCCTCAGAAGG+AGG + chr4.3:21326520-21326539 None:intergenic 45.0%
TTTGTTTCCCTCAGAAGGAG+GGG + chr4.3:21326518-21326537 None:intergenic 45.0%
! AATGGGCATTTGGAGCAAGA+TGG - chr4.3:21326204-21326223 MS.gene40095:CDS 45.0%
! ACCCCATTGCCTTTGTTTGA+AGG + chr4.3:21326359-21326378 None:intergenic 45.0%
! ATGGGCATTTGGAGCAAGAT+GGG - chr4.3:21326205-21326224 MS.gene40095:CDS 45.0%
! ATTACGGTTGGCTAATACGG+CGG + chr4.3:21325077-21325096 None:intergenic 45.0%
! GCGGCCAATTTGGTTCATTA+CGG + chr4.3:21325093-21325112 None:intergenic 45.0%
! GGGTTGTAGACATTGGTTGT+TGG - chr4.3:21327071-21327090 MS.gene40095:CDS 45.0%
! TCGGCGAACAAGAAGTTTTC+CGG - chr4.3:21325430-21325449 MS.gene40095:intron 45.0%
! TTATTTGGATCCCTGGCCTT+TGG + chr4.3:21326084-21326103 None:intergenic 45.0%
! TTCCCTCTTATTTGGATCCC+TGG + chr4.3:21326091-21326110 None:intergenic 45.0%
!! AGTGATTCTGAAGCTGGCAA+TGG - chr4.3:21326818-21326837 MS.gene40095:CDS 45.0%
!! ATTGGTTGTTGGTTTCAGCG+TGG - chr4.3:21327082-21327101 MS.gene40095:CDS 45.0%
!! CTTGTTCGCCGATTTCTTAG+GGG + chr4.3:21325422-21325441 None:intergenic 45.0%
!! TCAGGAAGTGATTCTGAAGC+TGG - chr4.3:21326812-21326831 MS.gene40095:CDS 45.0%
!! TTAGAAGTACTAGCAGGCTC+AGG + chr4.3:21325964-21325983 None:intergenic 45.0%
!! TTGGTTGTTGGTTTCAGCGT+GGG - chr4.3:21327083-21327102 MS.gene40095:CDS 45.0%
!! TTGTTCGCCGATTTCTTAGG+GGG + chr4.3:21325421-21325440 None:intergenic 45.0%
ACAGGTGGGAAATCGTTTGC+TGG + chr4.3:21326592-21326611 None:intergenic 50.0%
AGAGGTTATACCACTCGACG+AGG + chr4.3:21326701-21326720 None:intergenic 50.0%
AGCAAACGATTTCCCACCTG+TGG - chr4.3:21326591-21326610 MS.gene40095:CDS 50.0%
AGGCCAGGGATCCAAATAAG+AGG - chr4.3:21326085-21326104 MS.gene40095:CDS 50.0%
ATGGTCATTTGTAGCAGGGC+AGG - chr4.3:21326837-21326856 MS.gene40095:CDS 50.0%
CCCCTGATTCAATTCGTGTC+TGG + chr4.3:21325363-21325382 None:intergenic 50.0%
CGGAAAAGGTCGCTTATTGC+CGG + chr4.3:21325452-21325471 None:intergenic 50.0%
CTCGTGGAACCCTGTTGAAA+TGG - chr4.3:21325858-21325877 MS.gene40095:CDS 50.0%
CTTGCTCAATCTCCACAGGT+GGG + chr4.3:21326606-21326625 None:intergenic 50.0%
GATCTCTTATCCGCCGGAAA+AGG + chr4.3:21325466-21325485 None:intergenic 50.0%
GATTTAGCCGCCAGAGAAGA+TGG - chr4.3:21326152-21326171 MS.gene40095:CDS 50.0%
GCATCAACCTTCTCCCTATC+AGG + chr4.3:21326493-21326512 None:intergenic 50.0%
GGAACCCTGTTGAAATGGAG+AGG - chr4.3:21325863-21325882 MS.gene40095:CDS 50.0%
GGAATTGCCTGATAGGGAGA+AGG - chr4.3:21326483-21326502 MS.gene40095:CDS 50.0%
GGCCAGGGATCCAAATAAGA+GGG - chr4.3:21326086-21326105 MS.gene40095:CDS 50.0%
GGGCCATGATGTTAACACTG+CGG - chr4.3:21325744-21325763 MS.gene40095:intron 50.0%
GTGGGAATGGCTACTTGGAT+TGG - chr4.3:21327101-21327120 MS.gene40095:CDS 50.0%
TACTAGCAGGCTCAGGCATT+GGG + chr4.3:21325957-21325976 None:intergenic 50.0%
TCGCCGCAGTGTTAACATCA+TGG + chr4.3:21325750-21325769 None:intergenic 50.0%
TCGGATTCAGGGAGTTCTTC+AGG - chr4.3:21326794-21326813 MS.gene40095:CDS 50.0%
TCTTGCTCAATCTCCACAGG+TGG + chr4.3:21326607-21326626 None:intergenic 50.0%
TGACTACATCGTTGGAACGC+CGG + chr4.3:21325234-21325253 None:intergenic 50.0%
TGGTCATTTGTAGCAGGGCA+GGG - chr4.3:21326838-21326857 MS.gene40095:CDS 50.0%
TTCAAAGCAACCGGGTCAAC+CGG + chr4.3:21325577-21325596 None:intergenic 50.0%
! AGGGATTTGAAGTGCTTGGC+TGG + chr4.3:21325987-21326006 None:intergenic 50.0%
! CAAAGACCAACGTCGGTTAG+CGG - chr4.3:21326881-21326900 MS.gene40095:CDS 50.0%
! CAATAAGCGACCTTTTCCGG+CGG - chr4.3:21325453-21325472 MS.gene40095:intron 50.0%
! CGGCAATAAGCGACCTTTTC+CGG - chr4.3:21325450-21325469 MS.gene40095:intron 50.0%
! GGCAGGGCTTTTGGTACTAA+TGG - chr4.3:21326854-21326873 MS.gene40095:CDS 50.0%
! TGGGCATTTGGAGCAAGATG+GGG - chr4.3:21326206-21326225 MS.gene40095:CDS 50.0%
! TTTTAGCCATCCGGTTGACC+CGG - chr4.3:21325564-21325583 MS.gene40095:CDS 50.0%
!! AGTGCTTGCATGTGTTGGCT+AGG - chr4.3:21326931-21326950 MS.gene40095:CDS 50.0%
!! CTAACCGACGTTGGTCTTTG+GGG + chr4.3:21326881-21326900 None:intergenic 50.0%
!! CTCTCTGGAACTCGATCGAT+TGG - chr4.3:21326268-21326287 MS.gene40095:CDS 50.0%
!! GCTAACCGACGTTGGTCTTT+GGG + chr4.3:21326882-21326901 None:intergenic 50.0%
!! GGCTGGTTAGAAGTACTAGC+AGG + chr4.3:21325970-21325989 None:intergenic 50.0%
!! TGTTGGTTTCAGCGTGGGAA+TGG - chr4.3:21327088-21327107 MS.gene40095:CDS 50.0%
!! TTTGGCTTGGGCTGCTTCAA+GGG + chr4.3:21326066-21326085 None:intergenic 50.0%
CGGTGGTCCCCCTAAGAAAT+CGG - chr4.3:21325411-21325430 MS.gene40095:intron 55.0%
CTGTTGACACGGAGACTCTC+TGG - chr4.3:21326253-21326272 MS.gene40095:CDS 55.0%
CTTGAAGCAGCCCAAGCCAA+AGG - chr4.3:21326065-21326084 MS.gene40095:intron 55.0%
CTTGATCCGCTAACCGACGT+TGG + chr4.3:21326890-21326909 None:intergenic 55.0%
GAATGCTTACGCTATGCCGG+TGG - chr4.3:21325666-21325685 MS.gene40095:CDS 55.0%
GATGCAACCCCTCCTTCTGA+GGG - chr4.3:21326508-21326527 MS.gene40095:CDS 55.0%
GATTAAGCGGCAGGCGCTAA+TGG - chr4.3:21326319-21326338 MS.gene40095:CDS 55.0%
GGTGAGCAAGATTAAGCGGC+AGG - chr4.3:21326310-21326329 MS.gene40095:CDS 55.0%
GTACTAGCAGGCTCAGGCAT+TGG + chr4.3:21325958-21325977 None:intergenic 55.0%
TCAGCGTGGGAATGGCTACT+TGG - chr4.3:21327096-21327115 MS.gene40095:CDS 55.0%
TGATGCAACCCCTCCTTCTG+AGG - chr4.3:21326507-21326526 MS.gene40095:CDS 55.0%
TGGTCCCCAAAGACCAACGT+CGG - chr4.3:21326874-21326893 MS.gene40095:CDS 55.0%
! AGAGGTTGGAAGCGCGATGA+AGG - chr4.3:21325492-21325511 MS.gene40095:CDS 55.0%
! GGGTCTTGGCGTTTTGCTAG+CGG + chr4.3:21325937-21325956 None:intergenic 55.0%
! TCTTGGCGTTTTGCTAGCGG+TGG + chr4.3:21325934-21325953 None:intergenic 55.0%
! TTGTAGCAGGGCAGGGCTTT+TGG - chr4.3:21326845-21326864 MS.gene40095:CDS 55.0%
!! AGCGGTGGTGGGATTGGAAT+TGG + chr4.3:21325919-21325938 None:intergenic 55.0%
!! CGCTAACCGACGTTGGTCTT+TGG + chr4.3:21326883-21326902 None:intergenic 55.0%
!! CTTTGGCTTGGGCTGCTTCA+AGG + chr4.3:21326067-21326086 None:intergenic 55.0%
!! TCACTGGAAGTGCTCGCGTT+GGG + chr4.3:21326041-21326060 None:intergenic 55.0%
!! TTCACTGGAAGTGCTCGCGT+TGG + chr4.3:21326042-21326061 None:intergenic 55.0%
!! TTGGCTTGGGCTGCTTCAAG+GGG + chr4.3:21326065-21326084 None:intergenic 55.0%
!! TTTGCTAGCGGTGGTGGGAT+TGG + chr4.3:21325925-21325944 None:intergenic 55.0%
AAGCAACCGGGTCAACCGGA+TGG + chr4.3:21325573-21325592 None:intergenic 60.0%
AATTGGCCGCAGCACAGAGG+CGG - chr4.3:21325103-21325122 MS.gene40095:CDS 60.0%
CCAAATTGGCCGCAGCACAG+AGG - chr4.3:21325100-21325119 MS.gene40095:CDS 60.0%
CCAGTGGTTCCAGCAGCTCT+GGG - chr4.3:21326668-21326687 MS.gene40095:CDS 60.0%
CCTCTGTGCTGCGGCCAATT+TGG + chr4.3:21325103-21325122 None:intergenic 60.0%
GGAATCACTCCCAGAGCTGC+TGG + chr4.3:21326680-21326699 None:intergenic 60.0%
GGCTGCTTCAAGGGGTTCAC+TGG + chr4.3:21326057-21326076 None:intergenic 60.0%
GGGAGTGATTCCTCGTCGAG+TGG - chr4.3:21326688-21326707 MS.gene40095:CDS 60.0%
TCCAGGTCAAGCCACAACGG+CGG - chr4.3:21325391-21325410 MS.gene40095:intron 60.0%
TCCAGTGGTTCCAGCAGCTC+TGG - chr4.3:21326667-21326686 MS.gene40095:CDS 60.0%
! GGAAGCGCGATGAAGGCTTG+TGG - chr4.3:21325499-21325518 MS.gene40095:CDS 60.0%
! GGATCCCTGGCCTTTGGCTT+GGG + chr4.3:21326078-21326097 None:intergenic 60.0%
! GGCGTTTTGCTAGCGGTGGT+GGG + chr4.3:21325930-21325949 None:intergenic 60.0%
! TGGATCCCTGGCCTTTGGCT+TGG + chr4.3:21326079-21326098 None:intergenic 60.0%
! TGGCGTTTTGCTAGCGGTGG+TGG + chr4.3:21325931-21325950 None:intergenic 60.0%
!! CACTGGAAGTGCTCGCGTTG+GGG + chr4.3:21326040-21326059 None:intergenic 60.0%
!! CAGGCTCAGGCATTGGGTCT+TGG + chr4.3:21325951-21325970 None:intergenic 60.0%
ACCGCCGTTGTGGCTTGACC+TGG + chr4.3:21325395-21325414 None:intergenic 65.0%
ACTGCGGCGACGCAGCTTCT+TGG - chr4.3:21325760-21325779 MS.gene40095:intron 65.0%
AGCAGCCCAAGCCAAAGGCC+AGG - chr4.3:21326070-21326089 MS.gene40095:intron 65.0%
AGGCGGTGGAGCCGGATTCA+TGG - chr4.3:21325120-21325139 MS.gene40095:intron 65.0%
AGGTCAAGCCACAACGGCGG+TGG - chr4.3:21325394-21325413 MS.gene40095:intron 65.0%
CCCAGAGCTGCTGGAACCAC+TGG + chr4.3:21326671-21326690 None:intergenic 65.0%
GCAGCCCAAGCCAAAGGCCA+GGG - chr4.3:21326071-21326090 MS.gene40095:intron 65.0%
GGCGGTGGAGCCGGATTCAT+GGG - chr4.3:21325121-21325140 MS.gene40095:intron 65.0%
! GTTGGGGAGGGTGTGCGAAC+TGG + chr4.3:21326024-21326043 None:intergenic 65.0%
!! GGAAGTGCTCGCGTTGGGGA+GGG + chr4.3:21326036-21326055 None:intergenic 65.0%
!! TGGAAGTGCTCGCGTTGGGG+AGG + chr4.3:21326037-21326056 None:intergenic 65.0%
CAGCACAGAGGCGGTGGAGC+CGG - chr4.3:21325112-21325131 MS.gene40095:intron 70.0%
GCTCCACCGCCTCTGTGCTG+CGG + chr4.3:21325112-21325131 None:intergenic 70.0%
TAGGGGGACCACCGCCGTTG+TGG + chr4.3:21325405-21325424 None:intergenic 70.0%
TGGCCGCAGCACAGAGGCGG+TGG - chr4.3:21325106-21325125 MS.gene40095:CDS 75.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 21325067 21327129 21325067 ID=MS.gene40095
chr4.3 mRNA 21325067 21327129 21325067 ID=MS.gene40095.t1;Parent=MS.gene40095
chr4.3 exon 21326080 21327129 21326080 ID=MS.gene40095.t1.exon1;Parent=MS.gene40095.t1
chr4.3 CDS 21326080 21327129 21326080 ID=cds.MS.gene40095.t1;Parent=MS.gene40095.t1
chr4.3 exon 21325942 21326037 21325942 ID=MS.gene40095.t1.exon2;Parent=MS.gene40095.t1
chr4.3 CDS 21325942 21326037 21325942 ID=cds.MS.gene40095.t1;Parent=MS.gene40095.t1
chr4.3 exon 21325820 21325888 21325820 ID=MS.gene40095.t1.exon3;Parent=MS.gene40095.t1
chr4.3 CDS 21325820 21325888 21325820 ID=cds.MS.gene40095.t1;Parent=MS.gene40095.t1
chr4.3 exon 21325487 21325712 21325487 ID=MS.gene40095.t1.exon4;Parent=MS.gene40095.t1
chr4.3 CDS 21325487 21325712 21325487 ID=cds.MS.gene40095.t1;Parent=MS.gene40095.t1
chr4.3 exon 21325357 21325404 21325357 ID=MS.gene40095.t1.exon5;Parent=MS.gene40095.t1
chr4.3 CDS 21325357 21325404 21325357 ID=cds.MS.gene40095.t1;Parent=MS.gene40095.t1
chr4.3 exon 21325067 21325125 21325067 ID=MS.gene40095.t1.exon6;Parent=MS.gene40095.t1
chr4.3 CDS 21325067 21325125 21325067 ID=cds.MS.gene40095.t1;Parent=MS.gene40095.t1
Gene Sequence

>MS.gene40095

ATGGTATCCGCCGTATTAGCCAACCGTAATGAACCAAATTGGCCGCAGCACAGAGGCGGTGGAGCCGGATTCATGGGTAAAGTACCTTACGCTAACACTAACACTAACCCTAACCCTAAATTCAAGAGGAATCAATCTCCTTCAGATGACGCTTCTTCAATCAACCGGCGTTCCAACGATGTAGTCACGAATCATTCACAATACGTGACTTTCAATGTCTCTTCGTACTCAAAATCAGAGCTCAACGAGCTTAGAAACCGTTTCGTAACGGAGCTTGAACAAATTCGACAGCTCCAGACACGAATTGAATCAGGGGAATTAAAATCCAGGTCAAGCCACAACGGCGGTGGTCCCCCTAAGAAATCGGCGAACAAGAAGTTTTCCGGCAATAAGCGACCTTTTCCGGCGGATAAGAGATCAAAGTCAGAGGTTGGAAGCGCGATGAAGGCTTGTGGTCAGATTTTGCAAAAGCTGATGAAAACCAAAATAGCTTGGATTTTTAGCCATCCGGTTGACCCGGTTGCTTTGAATCTTCATGATTACTTTGATATAATTAAGCATCATATGGATCTGGGTACTGTTAAGTCAAAGCTTGCTAAGAATGCTTACGCTATGCCGGTGGATTTTGCTGATGATGTGAGGTTAACGTTCAAAAATGCATTGACATACAATACCAAGGGCCATGATGTTAACACTGCGGCGACGCAGCTTCTTGGAAAATTCGAGGAGCTTTATCGACCAATACATGAGAAATTTGATGAAAAAAGTTTTGATGATGAATTACATGCTAGCTCGTGGAACCCTGTTGAAATGGAGAGGGAAAGGAAGAGGGTCAAGAAAAAAGATAATCCAATTCCAATCCCACCACCGCTAGCAAAACGCCAAGACCCAATGCCTGAGCCTGCTAGTACTTCTAACCAGCCAAGCACTTCAAATCCCTCATTAGCGCAATCACCAGTTCGCACACCCTCCCCAACGCGAGCACTTCCAGTGAACCCCTTGAAGCAGCCCAAGCCAAAGGCCAGGGATCCAAATAAGAGGGAAATGAATGTTGAGGAAAAACATAAGTTGGGACTAGGGTTGCAGATTTAGCCGCCAGAGAAGATGGAACAAGTAGTACATATCACAAGGAAGAGAAATGGGCATTTGGAGCAAGATGGGGATGAGATTGAGCTTGATATGGAGGCTGTTGACACGGAGACTCTCTGGAACTCGATCGATTGGTTACCAATTGGAAAAAGATGGTGAGCAAGATTAAGCGGCAGGCGCTAATGGATAATAATAATGTGCCTTCAAACAAAGGCAATGGGGTAAAATCCTTATTGTCCATTTTTTATTCTGTTGAATGATGTTGCTGTCTAATGTAGCATTGTTGGCAGTGTTTTATCACATTCTAATTTGTTGTGTGCATTTACAGGAATTGCCTGATAGGGAGAAGGTTGATGCAACCCCTCCTTCTGAGGGAAACAAACAGAAGAAGATAGATGATGTTGATGAGGATGTTGACATCGGGGATGATATGCCAGCAAACGATTTCCCACCTGTGGAGATTGAGCAAGATAAAGATATGAGTGGTACTGGTGGCTGTGTCAGTAGTAGTTCCAGTGGTTCCAGCAGCTCTGGGAGTGATTCCTCGTCGAGTGGTATAACCTCTTTCCTCTAAATGTTGTGGTTTGTACTCTGAAATCATCATGGGTACAAACCTCAATTTTGATCTTCATGCAGATTCGGATTCAGGGAGTTCTTCAGGAAGTGATTCTGAAGCTGGCAATGGTCATTTGTAGCAGGGCAGGGCTTTTGGTACTAATGGTCCCCAAAGACCAACGTCGGTTAGCGGATCAAGAAATGTTTGCTTCGATGCTATAGTGCTTGCATGTGTTGGCTAGGTATGTCAATTTGATTGATTGATACATGTACATTTTTTACTCTGCTATGGCTTAAATGTTTTGCAGATAGCATAGCCGGCTAAATTTATCATGATTGTCTTTAAACTTGTTGTAACAGGGGTTGTAGACATTGGTTGTTGGTTTCAGCGTGGGAATGGCTACTTGGATTGGGACTAA
Protein sequence

>MS.gene40095.t1

MVSAVLANRNEPNWPQHRGGGAGFMGKVPYANTNTNPNPKFKRNQSPSDDASSINRRSNDVVTNHSQYVTFNVSSYSKSELNELRNRFVTELEQIRQLQTRIESGELKSRSSHNGGGPPKKSANKKFSGNKRPFPADKRSKSEVGSAMKACGQILQKLMKTKIAWIFSHPVDPVALNLHDYFDIIKHHMDLGTVKSKLAKNAYAMPVDFADDVRLTFKNALTYNTKGHDVNTAATQLLGKFEELYRPIHEKFDEKSFDDELHASSWNPVEMERERKRVKKKDNPIPIPPPLAKRQDPMPEPASTSNQPSTSNPSLAQSPVRTPSPTRALPVNPLKQPKPKARDPNKREMNPPEKMEQVVHITRKRNGHLEQDGDEIELDMEAMVSKIKRQALMDNNNVPSNKGNGELPDREKVDATPPSEGNKQKKIDDVDEDVDIGDDMPANDFPPVEIEQDKDMSGTGGCVSSSSSGSSSSGSDSSSSDSDSGSSSGSDSEAGNGVVDIGCWFQRGNGYLDWD